CmoCh14G010960 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G010960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (1.6.5.-) (NAD(P)H dehydrogenase subunit K) (NADH-plastoquinone oxidoreductase subunit K)
Location	Cmo_Chr14 : 6909429 .. 6910420 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCCCATTTTGGCATTTCTTATTTCTGGAGTTTTAGCCCCTCCTAGCAAAGAGCCAGAGAAACTTTCGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGAGTACAATTTCGAATCCGTTATTATATATTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACGGTTTTTCTTTATCCATGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCATTGGAATGGTCTTAGTTTTTGAATATTCAGACAATTAAAAAAAACATTGAGACAGTTATGAATTCCATCGAGTTTCCCTTACTTGATCGAACAACTCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACCAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTCCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGTCCACCTAAACTCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACTACCAACCACAAATTCCATATGTTTATAAAGCACTTCCCTAAGTTTCTATTTTTGAAAGATACGCGGATGGATAAGTAA

mRNA sequence

ATGATATTTTCTGGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACCAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTCCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGTCCACCTAAACTCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACTACCAACCACAAATTCCATATGTTTATAAAGCACTTCCCTAAGTTTCTATTTTTGAAAGATACGCGGATGGATAAGTAA

Coding sequence (CDS)

ATGATATTTTCTGGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACCAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTCCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGTCCACCTAAACTCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACTACCAACCACAAATTCCATATGTTTATAAAGCACTTCCCTAAGTTTCTATTTTTGAAAGATACGCGGATGGATAAGTAA

Homology

[Close]

BLAST of CmoCh14G010960 vs. Swiss-Prot
Match: NDHK_CUCSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus GN=ndhK PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.1e-83
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. Swiss-Prot
Match: NDHK_OENAR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola GN=ndhK PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.0e-83
Identity = 150/156 (96.15%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EA+I
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAII 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. Swiss-Prot
Match: NDHK_OENPA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera parviflora GN=ndhK PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.0e-83
Identity = 150/156 (96.15%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EA+I
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAII 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. Swiss-Prot
Match: NDHK_OENGL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana GN=ndhK PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.0e-83
Identity = 150/156 (96.15%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EA+I
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAII 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. Swiss-Prot
Match: NDHK_OENEH (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhK PE=3 SV=2)

HSP 1 Score: 308.1 bits (788), Expect = 6.0e-83
Identity = 150/156 (96.15%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EA+I
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAII 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIRSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. TrEMBL
Match: A0A0S2IG30_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita lundelliana GN=ndhK PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. TrEMBL
Match: A0A0S2IEV1_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita foetidissima GN=ndhK PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. TrEMBL
Match: A0A0S2IGX8_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita pedatifolia GN=ndhK PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. TrEMBL
Match: A0A0S2IGD7_CUCPE (NADH-quinone oxidoreductase subunit B OS=Cucurbita pepo var. ozarkana GN=ndhK PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. TrEMBL
Match: A0A0S2IHB2_CUCPE (NADH-quinone oxidoreductase subunit B OS=Cucurbita pepo subsp. pepo GN=ndhK PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. TAIR10
Match: ATCG00430.1 (ATCG00430.1 photosystem II reaction center protein G)

HSP 1 Score: 297.0 bits (759), Expect = 7.8e-81
Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKF 157
           DAITKLRKKI+REIY+DRI+ Q+ NRCFTTNHKF
Sbjct: 148 DAITKLRKKIAREIYKDRIRPQQGNRCFTTNHKF 181

[Close]

BLAST of CmoCh14G010960 vs. TAIR10
Match: AT5G11770.1 (AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial)

HSP 1 Score: 148.3 bits (373), Expect = 4.5e-36
Identity = 64/134 (47.76%), Postives = 100/134 (74.63%), Query Frame = 1


Query: 1   MIFSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKM 60
           M ++   S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AGT+T KM
Sbjct: 76  MNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKM 135

Query: 61  APSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEA 120
           AP+L ++Y+QMPEP++VI+MG+C   GG +   SYS VRG D+++PVD+Y+PGCPP  EA
Sbjct: 136 APALRKVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIVPVDIYVPGCPPTAEA 195

Query: 121 VIDAITKLRKKISR 135
           ++  + +L+KKI+R
Sbjct: 196 LLYGLLQLQKKINR 208

[Close]

BLAST of CmoCh14G010960 vs. NCBI nr
Match: gi|1002166188|ref|YP_009236284.1| (NADH-plastoquinone oxidoreductase subunit K (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 309.7 bits (792), Expect = 3.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. NCBI nr
Match: gi|952954736|gb|ALO22094.1| (NdhK (plastid) [Cucurbita ficifolia])

HSP 1 Score: 309.7 bits (792), Expect = 3.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. NCBI nr
Match: gi|68164807|ref|YP_247603.1| (NADH dehydrogenase subunit K [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 3.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. NCBI nr
Match: gi|346578195|ref|YP_004841787.1| (NADH-plastoquinone oxidoreductase subunit K [Cucumis melo subsp. melo])

HSP 1 Score: 309.7 bits (792), Expect = 3.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

[Close]

BLAST of CmoCh14G010960 vs. NCBI nr
Match: gi|952954396|gb|ALO21760.1| (NdhK (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 309.7 bits (792), Expect = 3.3e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 3   FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 62
           +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP
Sbjct: 28  WSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAP 87

Query: 63  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKLEAVI 122
           SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK EAVI
Sbjct: 88  SLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVI 147

Query: 123 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM 159
           DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Sbjct: 148 DAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHV 183

The following BLAST results are available for this feature:

BLAST of CmoCh14G010960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDHK_CUCSA	2.1e-83	97.44	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus GN=nd...	[more]
NDHK_OENAR	6.0e-83	96.15	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola...	[more]
NDHK_OENPA	6.0e-83	96.15	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera parviflora ...	[more]
NDHK_OENGL	6.0e-83	96.15	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana...	[more]
NDHK_OENEH	6.0e-83	96.15	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera elata subsp...	[more]

BLAST of CmoCh14G010960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IG30_9ROSI	2.3e-81	97.44	NADH-quinone oxidoreductase subunit B OS=Cucurbita lundelliana GN=ndhK PE=3 SV=1	[more]
A0A0S2IEV1_9ROSI	2.3e-81	97.44	NADH-quinone oxidoreductase subunit B OS=Cucurbita foetidissima GN=ndhK PE=3 SV=...	[more]
A0A0S2IGX8_9ROSI	2.3e-81	97.44	NADH-quinone oxidoreductase subunit B OS=Cucurbita pedatifolia GN=ndhK PE=3 SV=1	[more]
A0A0S2IGD7_CUCPE	2.3e-81	97.44	NADH-quinone oxidoreductase subunit B OS=Cucurbita pepo var. ozarkana GN=ndhK PE...	[more]
A0A0S2IHB2_CUCPE	2.3e-81	97.44	NADH-quinone oxidoreductase subunit B OS=Cucurbita pepo subsp. pepo GN=ndhK PE=3...	[more]

BLAST of CmoCh14G010960 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00430.1	7.8e-81	94.16	ATCG00430.1 photosystem II reaction center protein G	[more]
AT5G11770.1	4.5e-36	47.76	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	[more]

BLAST of CmoCh14G010960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1002166188\|ref\|YP_009236284.1\|	3.3e-81	97.44	NADH-plastoquinone oxidoreductase subunit K (chloroplast) [Gynostemma pentaphyll...	[more]
gi\|952954736\|gb\|ALO22094.1\|	3.3e-81	97.44	NdhK (plastid) [Cucurbita ficifolia]	[more]
gi\|68164807\|ref\|YP_247603.1\|	3.3e-81	97.44	NADH dehydrogenase subunit K [Cucumis sativus]	[more]
gi\|346578195\|ref\|YP_004841787.1\|	3.3e-81	97.44	NADH-plastoquinone oxidoreductase subunit K [Cucumis melo subsp. melo]	[more]
gi\|952954396\|gb\|ALO21760.1\|	3.3e-81	97.44	NdhK (plastid) [Cucurbita argyrosperma]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006137	NADH_UbQ_OxRdtase-like_20kDa
IPR006138	NADH_UQ_OxRdtase_20Kd_su

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0051539	4 iron, 4 sulfur cluster binding
GO:0008137	NADH dehydrogenase (ubiquinone) activity
GO:0048038	quinone binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G010960.1	CmoCh14G010960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	GENE3D	G3DSA:3.40.50.700		coord: 6..136 score: 6.4
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	PFAM	PF01058	Oxidored_q6	coord: 19..128 score: 1.9
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	TIGRFAMs	TIGR01957	TIGR01957	coord: 4..134 score: 8.3
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	PROSITE	PS01150	COMPLEX1_20K	coord: 100..116 scor
None	No IPR available	PANTHER	PTHR11995	NADH DEHYDROGENASE	coord: 3..158 score: 1.5E
None	No IPR available	PANTHER	PTHR11995:SF21	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT K, CHLOROPLASTIC	coord: 3..158 score: 1.5E
None	No IPR available	unknown	SSF56770	HydA/Nqo6-like	coord: 6..141 score: 7.72

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G010960	Watermelon (Charleston Gray)	cmowcgB206
CmoCh14G010960	Watermelon (97103) v1	cmowmB213
CmoCh14G010960	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G010960	Bottle gourd (USVL1VR-Ls)	cmolsiB228
CmoCh14G010960	Watermelon (97103) v2	cmowmbB229
CmoCh14G010960	Wax gourd	cmowgoB0279