CmoCh14G010920 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G010920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA-directed DNA polymerase homolog
LocationCmo_Chr14 : 6546529 .. 6552564 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGAATTTGCCCCATTGAACGCGAACCTCGTGCTCTGGGTGCTTGATGGAGGTCATCGCCCCGTTGAGCCGGTATGCCTAGTTTGCATGAATTACATACTATGATGTTAGAAGAAGATTGCATGCACCCTCTGTTAATTGCTAGGGCCCATTTCTATGATAAGATTAGGGAATTTCTTTTAGGAGCGATATGCCGCTCTAGACAGACTTAATTTTCTCCTAGAAACTTAGCGGTTTACCACGGTAAGAAAGTACCTAAGGGGGTTCATAGATTGCTAGCGTGAGAACGGTATCTATAGCTTCGTGGGAGGACCAAGGGTCCCTGATCAGTCCTTACTATTCTTAGCCATTTCGCATGGGAAATGTGTCCCCACGTCGTACAGCCCATTAGCTGCATGGGAACGGGTTGGGTCGCGCCCCCCATAGGAGGACTATATGGGCGTAGGGGTATTCAGCACACCCCTAGGCTAGGTACCATGTAGTTCTAGATAGCCATGTAGAGGTAGCGCCTCATAGAGAGATACCGACCATATTAGCTTGGCATAAGGAACCTCTAGGTGGCTAATGAAAGGACGATGAACCGGTGAAACCCAAGGGGCAAGCCCCAAGAGGCTATGGTTAGAACCCGATGTCCTAGAACCAAATTAGGAAACCGTGGGAGTTCTGTTAAATTAAGATGCGAAGAGAGCCTACAAGTAGGTGGCTTACTGAGTATAATTTTTATACTCATCCTTGCTATGTTTTCTTTTTTTTTTCAGGGGCGCGAGGCGTCGGCCAAGAGTGGGCGTGATCTGAAGGGAATTGTCACAGAGGAATGGGTTGTCCCGGGGCGTCAGTCCAGTCTTAGTCATCATTTTTGTATTCGCATTCTTTTTAAATTTATTTTCCAAACGGTCTTGTGTTCTGTGTTTATCGTTCGAAAAACTTTATTGAAATTTGATGATTTTCACTACTTCATATTTAAATCTCTTGTGCATCTGTGTCGTGTCGTTAGTCACCGTCCGTAGTAAAATATTGGGCTGTGACAAATTTGGTATCAGAGCCGTCAGATTATAGGTCCTGTAGACATTTAGGGTAGAGAGTCGTGTCCTCTGTGACTTCGCTCGTCAATCACATGCCGCTCACGACCAGATGTTCTCACGCGACGGAAAAATAGAGACAAAGGTTAAGTTAGTATTTATAGAGCATACCATGACTGACCAGGGCATTATATCGCACATTACCTAGGAGATGTGTTGTGGATGAATTGTGACCATAGTTCTTTGTTATCGTGGTAGATAATGGCACCAAAGAGACGCGAACCGTATGTAGGGCCAGGACCTAGAAGGGGAAGAAGAGAGGAAGTTCAGGACACCTCGGTTCCAATACCTGAAGAGGAACAACCTGAACTTCAGGAGGAGGTTGGGGATATGCCCCAAACTAGCGAGGGGACAGTACCACAGCCATCAAGATCGAAAAGACGCCGAATGAAGGCCAAGGCCCGAAGGCTGCTCGAGACACCCCCTACTACTCCCTTCTCCGAGGAGGCCCCATCGGATCCAACCCCGTGTACAGCAGTCCCACTAAACCAGCCATTAGCCATGCCCTCAGCAGAGATGTTTCAGACGTTCATGATGACGTCGATGGAAAATCAGGCTCTGACGAACCAGATGATTCAGACCATGATGTCTAATCAGTCAACAGGGCAAGGGGGCAAGGATTCAGGGACTATGACTGTGGAGTCCCGCTACTTGAGAGATTTCCAGAGGCATAAACCGCCTTCCTTTGACGAAGGCAAGATGGATCTTATTGCCGCTGAGAATTGGCTAGAGGCCATAGAAACGGCCTTCCATTTTATGAACTGCCCACCAAAGTATGAAGTCCATTGTGGGACATATATGCTGAAAGGAGAAGCGCACTTCTGGTGGAAAGGTGCTCAGAAAACCATAGTACCACAAGGAGAGTTTATTACATGGTGTCAGTTTAAAGACGCATACCTCCACAAATACTACCCAAATCACTGCCAGAGTGAAAATGCAGGCCGCGTTCCTCGCATTGAAACAGGGAGACAGATCAGTGGGGGATTATGACTTGGAGTTCAATAGGCTGGCAAGGTTTTCTCCAGCCTATGTTAGTTCTGAGGAGTTGAAGGGCGAACGATTTATTGCTGGCCTGAGGGAAGAACTAAGGGGGAATGTGGCATCCCAGTCATCCTTTGTCTATACGAAAGCCCTTCAGGTGGCGACCCTGCTCGACTCGCCCCGTACCGACAAGCTTCAGTTGGGAATAGCACAATCATCCCACACTGCGGCCCAGGGAAAGGGGGCATACCCTAGCCACCCCAGAACTGGCAGACCACCCCGTGGCCGCACTGATAGGCGAGGGAGAGCCCCGGTACGGAACATGACTTTGTGCCCTAATTGTCGGCGTCCTCACACGGGGGAATGCAGAGCAGGAACAGGCGCCTGCTACAGATGCGGTCAGGTAGGGCACTTTGCAGTGGATTGCCCTCAGAGAAACGATCAGCGTGTTAACCTGCCTGCAGTACAGCATCAGAGGGGCCAAGCCGGCCAACATCAGCAGGGGCGAGCTGTAGCCCATGCAACAACAGCCAGGCAAGCTGACCAGCCTGACGCGGTTGTCACAGGTACGCTACCCGTATTTGGTCATCTTGCATTAGTGTTGTTTGATTCGGGTTCGACGCATTCATTCGTATCTGAAGAGTTTGTAGAGCTAGCACAGCTAGAGAAAGAACTTTTAGAGATTACCCTATCAGTGTCTACCCCTGCTCACGAGCTGTTGCTAGCTACCCATAGGGTGAAGGGAGGTGGAGTAACGATAGCAGGGCGTGTCATCGAAGCTACACTGATAGTGTTAAGGATGCAAGACTTCGATGTCATCTTGGGTATGGATTGGCTAGGCGGGAATCGCGTTTTGATAGACTGCGAGACCCGAATAGTGACTCTCAGGCTCCCGTCAGGGGACATCTTTACCTACAAGGGAGCCACTTCCAAAGGTGTCCCGAGCGTCATAACCTCGCTAAGGGCTAAGAAGTTGATTCGTAGTGGCGCAATTGCATTCCTAGCCAGCGTGACCTTAGATAATAGTAACAAACAAAAAACCTCATCGGTACACATCGTCAGGGAGTTCGTAGATGTCTTTCCGGAGGATCTGCCGGGTTTGCCCCCAGCTAGGGAAGTCGATTTTGGGATCGATTTAGAACCAGGAACGATGCCGATCTCCAAGGCACCTTACAGGATGGCACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGAGTTGTTGGATAAGGGTTTCATCCGACCCAGTGTATCACCCTGGGGAGCCCCTGTTCTGTTTGTCAAGAAGAAGGACGGGTCCATGCGGATGTGTATTGATTACAGGGAATTAAACAAGGTCACTATAATGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTTCTCCAATATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTCAGGGAAGGGGATATACCCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTCGTTATGTCTTTTAGCCTTACCAATGCACCAGCTGTTTTCATGGAACTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCTTAGTGTTCATCGACGACATTCTGGTATACTCTAAGTCAGAGGCAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCTAAGTGTGAGTTTTGGTTGTCTGAAGTTGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTTTTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAAGAAGGGCAAGCCCTTTGCTTGGACTCCAGTCTGCGAACAGAGTTTCCAGGAACTCAAGAAGAGGTTGGTAACTGCACCAGTCCTTACGGTTCCAGATGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGGCTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAGTATTCGCTCTAAAAACGTGGCGACACTACCTGTATGGGGAAAAAGTACAAGTCTTCACTGATTATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGACAGAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGTAGCTGATGCATTGAGCAGGAAGGCTGTGCATACTTCTGTGATGATCACCACACAGGAAAAACTACAAGATGAGATGAAGAGGGCTGGGATAGACGTGATGATTAAAGGTGGTAATGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAAGTTATCGACGCTCAGAGGTCTGATGAACACCTCAGTAAAGTGTGGAGTCAGATTGAGACCGAGAGGCCAGTAGGGTATTCTATCTCCTCAAACGGGGGTCTGCTATGGCAAAACCGCCTGTGCGTTCCCCGAGACGAGGGAATCTTAAAAGATATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGGTTTTACTGGTGGTCCGGAATGAAGAGGGACATAGCGGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCGGGATTGCTACAGCCCTTGAGCGTCCCTCAGTGGAAATGGGAAGCAGTCTGTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCGTATGGGTAATTGTAGACAGACTGACTAAGACAGCCCACTTCATTCCAGGAAAGTCCACATATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGAGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTGGAGGAGTCTTCAGAAGGCACTAGGGACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGCGAGCCTGCTCCTTAGATTTCGCTGGGTGTTGGGACGAACATCTGCCTTTAATGGAGTTTGCCTACAACAATAGTTATCAAGCGACCATTCAGATGGCCCCCTTCGAGGCACTGTATGGGCGTAGGTGTCGAACACCAGTGTTTTGGGAAGAGGTAGGCACGCAGCAACTAATGGGACCAGAGTTGGTCCAGGTCACCAACGCAGTGGTGCAGAAAATCAAACAGAGGATACTCACCGCACAGAGTCGACAGAAAAGCTATGCAGATGTGCGTAGAAGGGACCTCAAATTTGAGGTGGGTGACCACGTGTTCCTGAAGGTGGCCCCTATGAGGGGGGTGTTGAGGTTTGGGAAGAAAGGGAAATTGAGCCCAAGGTTCATAGGCCCCTTCGAGATTCTGGACAGAGTCGGGGCTGTGGCTTACAGAATTGCCCTACCACCGAACCTTGCCGCCGTGCACAATGTGTTCCACGTATCCATGCTGCGAAAGTATACTCCCGACCCTACTCATGTAATCGAGCATGGGATGCTTCCTCTTCGAGAAGATCTGTCTTACGAGGAACAGCCTAGCAGGATTTTAGCTCGAGACACTAGGCGGTTGCGTAACAAAGATATTCCCTTGGTAAAGGTCTCATGGGGTAACCGCCGTGAGGAAGAGGCAACCTGGGAACGAGAAGAGGACGTGAGGAAAGCTTATCCCGAACTCTTCCAAGGGATAGCTACTTTCGGGGACGAAAGTTCCTAA

mRNA sequence

ATGGACGAATTTGCCCCATTGAACGCGAACCTCGTGCTCTGGGTGCTTGATGGAGGTCATCGCCCCGTTGAGCCGGGGCGCGAGGCGTCGGCCAAGAGTGGGCGTGATCTGAAGGGAATTGTCACAGAGGAATGGGTTGTCCCGGGGCGGCCAGGACCTAGAAGGGGAAGAAGAGAGGAAGTTCAGGACACCTCGGTTCCAATACCTGAAGAGGAACAACCTGAACTTCAGGAGGAGGTTGGGGATATGCCCCAAACTAGCGAGGGGACAGTACCACAGCCATCAAGATCGAAAAGACGCCGAATGAAGGCCAAGGCCCGAAGGCTGCTCGAGACACCCCCTACTACTCCCTTCTCCGAGGAGGCCCCATCGGATCCAACCCCGTGTACAGCAGTCCCACTAAACCAGCCATTAGCCATGCCCTCAGCAGAGATGTTTCAGACGTTCATGATGACGTCGATGGAAAATCAGGCTCTGACGAACCAGATGATTCAGACCATGATGTCTAATCAGTCAACAGGGCAAGGGGGCAAGGATTCAGGGACTATGACTGTGGAGTCCCGCTACTTGAGAGATTTCCAGAGGCATAAACCGCCTTCCTTTGACGAAGGCAAGATGGATCTTATTGCCGCTGAGAATTGGCTAGAGGCCATAGAAACGGCCTTCCATTTTATGAACTGCCCACCAAATTTAAAGACGCATACCTCCACAAATACTACCCAAATCACTGCCAGAGTGAAAATGCAGGCCGCGTTCCTCGCATTGAAACAGGGAGACAGATCAGTGGGGGATTATGACTTGGAGTTCAATAGGCTGGCAAGGTTTTCTCCAGCCTATGTTAGTTCTGAGGAGTTGAAGGGCGAACGATTTATTGCTGGCCTGAGGGAAGAACTAAGGGGGAATGTGGCATCCCAGTCATCCTTTGTCTATACGAAAGCCCTTCAGGTGGCGACCCTGCTCGACTCGCCCCGTACCGACAAGCTTCAGTTGGGAATAGCACAATCATCCCACACTGCGGCCCAGGGAAAGGGGGCATACCCTAGCCACCCCAGAACTGGCAGACCACCCCGTGGCCGCACTGATAGGCGAGGGAGAGCCCCGGTACGGAACATGACTTTGTGCCCTAATTGTCGGCGTCCTCACACGGGGGAATGCAGAGCAGGAACAGGCGCCTGCTACAGATGCGGTCAGGTAGGGCACTTTGCAGTGGATTGCCCTCAGAGAAACGATCAGCGTGTTAACCTGCCTGCAGTACAGCATCAGAGGGGCCAAGCCGGCCAACATCAGCAGGGGCGAGCTGTAGCCCATGCAACAACAGCCAGGCAAGCTGACCAGCCTGACGCGGTTGTCACAGGTACGCTACCCGTATTTGGTCATCTTGCATTAGTGTTGTTTGATTCGGGTTCGACGCATTCATTCGTATCTGAAGAGTTTGTAGAGCTAGCACAGCTAGAGAAAGAACTTTTAGAGATTACCCTATCAGTGTCTACCCCTGCTCACGAGCTGTTGCTAGCTACCCATAGGGTGAAGGGAGGTGGAGTAACGATAGCAGGGCGTGTCATCGAAGCTACACTGATAGTGTTAAGGATGCAAGACTTCGATGTCATCTTGGGTATGGATTGGCTAGGCGGGAATCGCGTTTTGATAGACTGCGAGACCCGAATAGTGACTCTCAGGCTCCCGTCAGGGGACATCTTTACCTACAAGGGAGCCACTTCCAAAGGTGTCCCGAGCGTCATAACCTCGCTAAGGGCTAAGAAGTTGATTCGTAGTGGCGCAATTGCATTCCTAGCCAGCGTGACCTTAGATAATAGTAACAAACAAAAAACCTCATCGGTACACATCGTCAGGGAGTTCGTAGATGTCTTTCCGGAGGATCTGCCGGGTTTGCCCCCAGCTAGGGAAGTCGATTTTGGGATCGATTTAGAACCAGGAACGATGCCGATCTCCAAGGCACCTTACAGGATGGCACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGAGTTGTTGGATAAGGGTTTCATCCGACCCAGTGTATCACCCTGGGGAGCCCCTGTTCTGTTTGTCAAGAAGAAGGACGGGTCCATGCGGATGTGTATTGATTACAGGGAATTAAACAAGGTCACTATAATGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTTCTCCAATATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTCAGGGAAGGGGATATACCCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTCGTTATGTCTTTTAGCCTTACCAATGCACCAGCTGTTTTCATGGAACTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCTTAGTGTTCATCGACGACATTCTGGTATACTCTAAGTCAGAGGCAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCTAAGTGTGAGTTTTGGTTGTCTGAAGTTGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTTTTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAAGAAGGGCAAGCCCTTTGCTTGGACTCCAGTCTGCGAACAGAGTTTCCAGGAACTCAAGAAGAGGTTGGTAACTGCACCAGTCCTTACGGTTCCAGATGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGGCTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAGTATTCGCTCTAAAAACGTGGCGACACTACCTGTATGGGGAAAAAGTACAAGTCTTCACTGATTATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGACAGAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGTAGCTGATGCATTGAGCAGGAAGGCTGTGCATACTTCTGTGATGATCACCACACAGGAAAAACTACAAGATGAGATGAAGAGGGCTGGGATAGACGTGATGATTAAAGGTGGTAATGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAAGTTATCGACGCTCAGAGGTCTGATGAACACCTCAGTAAAGTGTGGAGTCAGATTGAGACCGAGAGGCCAGTAGGGTATTCTATCTCCTCAAACGGGGGTCTGCTATGGCAAAACCGCCTGTGCGTTCCCCGAGACGAGGGAATCTTAAAAGATATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGGTTTTACTGGTGGTCCGGAATGAAGAGGGACATAGCGGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCGGGATTGCTACAGCCCTTGAGCGTCCCTCAGTGGAAATGGGAAGCAGTCTGTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCGTATGGGTAATTGTAGACAGACTGACTAAGACAGCCCACTTCATTCCAGGAAAGTCCACATATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGAGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTGGAGGAGTCTTCAGAAGGCACTAGGGACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGCGAGCCTGCTCCTTAGATTTCGCTGGGTGTTGGGACGAACATCTGCCTTTAATGGAGTTTGCCTACAACAATAGTTATCAAGCGACCATTCAGATGGCCCCCTTCGAGGCACTGTATGGGCGTAGGTGTCGAACACCAGTGTTTTGGGAAGAGGTAGGCACGCAGCAACTAATGGGACCAGAGTTGGTCCAGGTCACCAACGCAGTGGTGCAGAAAATCAAACAGAGGATACTCACCGCACAGAGTCGACAGAAAAGCTATGCAGATGTGCGTAGAAGGGACCTCAAATTTGAGGTGGGTGACCACGTGTTCCTGAAGGTGGCCCCTATGAGGGGGGTGTTGAGGTTTGGGAAGAAAGGGAAATTGAGCCCAAGGTTCATAGGCCCCTTCGAGATTCTGGACAGAGTCGGGGCTGTGGCTTACAGAATTGCCCTACCACCGAACCTTGCCGCCGTGCACAATGTGTTCCACGTATCCATGCTGCGAAAGTATACTCCCGACCCTACTCATGTAATCGAGCATGGGATGCTTCCTCTTCGAGAAGATCTGTCTTACGAGGAACAGCCTAGCAGGATTTTAGCTCGAGACACTAGGCGGTTGCGTAACAAAGATATTCCCTTGGTAAAGGTCTCATGGGGTAACCGCCGTGAGGAAGAGGCAACCTGGGAACGAGAAGAGGACGTGAGGAAAGCTTATCCCGAACTCTTCCAAGGGATAGCTACTTTCGGGGACGAAAGTTCCTAA

Coding sequence (CDS)

ATGGACGAATTTGCCCCATTGAACGCGAACCTCGTGCTCTGGGTGCTTGATGGAGGTCATCGCCCCGTTGAGCCGGGGCGCGAGGCGTCGGCCAAGAGTGGGCGTGATCTGAAGGGAATTGTCACAGAGGAATGGGTTGTCCCGGGGCGGCCAGGACCTAGAAGGGGAAGAAGAGAGGAAGTTCAGGACACCTCGGTTCCAATACCTGAAGAGGAACAACCTGAACTTCAGGAGGAGGTTGGGGATATGCCCCAAACTAGCGAGGGGACAGTACCACAGCCATCAAGATCGAAAAGACGCCGAATGAAGGCCAAGGCCCGAAGGCTGCTCGAGACACCCCCTACTACTCCCTTCTCCGAGGAGGCCCCATCGGATCCAACCCCGTGTACAGCAGTCCCACTAAACCAGCCATTAGCCATGCCCTCAGCAGAGATGTTTCAGACGTTCATGATGACGTCGATGGAAAATCAGGCTCTGACGAACCAGATGATTCAGACCATGATGTCTAATCAGTCAACAGGGCAAGGGGGCAAGGATTCAGGGACTATGACTGTGGAGTCCCGCTACTTGAGAGATTTCCAGAGGCATAAACCGCCTTCCTTTGACGAAGGCAAGATGGATCTTATTGCCGCTGAGAATTGGCTAGAGGCCATAGAAACGGCCTTCCATTTTATGAACTGCCCACCAAATTTAAAGACGCATACCTCCACAAATACTACCCAAATCACTGCCAGAGTGAAAATGCAGGCCGCGTTCCTCGCATTGAAACAGGGAGACAGATCAGTGGGGGATTATGACTTGGAGTTCAATAGGCTGGCAAGGTTTTCTCCAGCCTATGTTAGTTCTGAGGAGTTGAAGGGCGAACGATTTATTGCTGGCCTGAGGGAAGAACTAAGGGGGAATGTGGCATCCCAGTCATCCTTTGTCTATACGAAAGCCCTTCAGGTGGCGACCCTGCTCGACTCGCCCCGTACCGACAAGCTTCAGTTGGGAATAGCACAATCATCCCACACTGCGGCCCAGGGAAAGGGGGCATACCCTAGCCACCCCAGAACTGGCAGACCACCCCGTGGCCGCACTGATAGGCGAGGGAGAGCCCCGGTACGGAACATGACTTTGTGCCCTAATTGTCGGCGTCCTCACACGGGGGAATGCAGAGCAGGAACAGGCGCCTGCTACAGATGCGGTCAGGTAGGGCACTTTGCAGTGGATTGCCCTCAGAGAAACGATCAGCGTGTTAACCTGCCTGCAGTACAGCATCAGAGGGGCCAAGCCGGCCAACATCAGCAGGGGCGAGCTGTAGCCCATGCAACAACAGCCAGGCAAGCTGACCAGCCTGACGCGGTTGTCACAGGTACGCTACCCGTATTTGGTCATCTTGCATTAGTGTTGTTTGATTCGGGTTCGACGCATTCATTCGTATCTGAAGAGTTTGTAGAGCTAGCACAGCTAGAGAAAGAACTTTTAGAGATTACCCTATCAGTGTCTACCCCTGCTCACGAGCTGTTGCTAGCTACCCATAGGGTGAAGGGAGGTGGAGTAACGATAGCAGGGCGTGTCATCGAAGCTACACTGATAGTGTTAAGGATGCAAGACTTCGATGTCATCTTGGGTATGGATTGGCTAGGCGGGAATCGCGTTTTGATAGACTGCGAGACCCGAATAGTGACTCTCAGGCTCCCGTCAGGGGACATCTTTACCTACAAGGGAGCCACTTCCAAAGGTGTCCCGAGCGTCATAACCTCGCTAAGGGCTAAGAAGTTGATTCGTAGTGGCGCAATTGCATTCCTAGCCAGCGTGACCTTAGATAATAGTAACAAACAAAAAACCTCATCGGTACACATCGTCAGGGAGTTCGTAGATGTCTTTCCGGAGGATCTGCCGGGTTTGCCCCCAGCTAGGGAAGTCGATTTTGGGATCGATTTAGAACCAGGAACGATGCCGATCTCCAAGGCACCTTACAGGATGGCACCTGCAGAACTCAGGGAATTGAAGGAACAGTTACAGGAGTTGTTGGATAAGGGTTTCATCCGACCCAGTGTATCACCCTGGGGAGCCCCTGTTCTGTTTGTCAAGAAGAAGGACGGGTCCATGCGGATGTGTATTGATTACAGGGAATTAAACAAGGTCACTATAATGAATAAGTACCCTCTCCCGAGAATTGACGACCTGTTTGATCAGCTACAGGGAGCAACAGTTTTCTCCAATATTGACCTAAGGTCGGGGTATCATCAGTTGAGGGTCAGGGAAGGGGATATACCCAAGACAGCCTTCAGAAGTCGTTATGGGCATTACGAGTTTCTCGTTATGTCTTTTAGCCTTACCAATGCACCAGCTGTTTTCATGGAACTAATGAACAGGGTGTTTAAGGAATTCTTAGACACCTTTGTCTTAGTGTTCATCGACGACATTCTGGTATACTCTAAGTCAGAGGCAGATCATGAAATACACCTCAGAAAAGTCTTGACAATACTGAGAGCTCAGCAGTTGTATGCCAAGTTCTCTAAGTGTGAGTTTTGGTTGTCTGAAGTTGCGTTTCTGGGTCACGTGGTGTCAAGCAAGGGGATCACAGTGGACCCAGCTAAGATAGAAGCAGTGATGAGGTGGCCACAGCCGACCACAGTCACAGAGGTGAGGAGTTTTCTTGGGCTAGCTGGTTATTACAGAAGGTTTGTTCAGGATTTCTCCAAAATTTCCTCGGCGCTGACTCAGCTAACCAAGAAGGGCAAGCCCTTTGCTTGGACTCCAGTCTGCGAACAGAGTTTCCAGGAACTCAAGAAGAGGTTGGTAACTGCACCAGTCCTTACGGTTCCAGATGGGTCAGGTAATCTCGTGGTGTACAGTGATGCATCAGGGAAAGGCTTGGGGTGTGTGCTCATGCAGAAAGGTAAGGTGATAGCGTATGCTTCTCGACAATTGAAAGAATATGAACGAAACTACCCCACGCATGATCTCGAGTTAGCAGCGGTAGTATTCGCTCTAAAAACGTGGCGACACTACCTGTATGGGGAAAAAGTACAAGTCTTCACTGATTATAAGAGCCTCAAGTACTTATTCACGCAGAAGGAGCTCAATATGAGACAGAGGCGATGGTTGGAGCTGGTAAAGGATTATGACATAGAGATTCTGTACCATCCAGGCAAAGCCAACGTGGTAGCTGATGCATTGAGCAGGAAGGCTGTGCATACTTCTGTGATGATCACCACACAGGAAAAACTACAAGATGAGATGAAGAGGGCTGGGATAGACGTGATGATTAAAGGTGGTAATGTTCAGATAGCACAGTTAACTATACAGCCTACCCTACGAAAGAAAGTTATCGACGCTCAGAGGTCTGATGAACACCTCAGTAAAGTGTGGAGTCAGATTGAGACCGAGAGGCCAGTAGGGTATTCTATCTCCTCAAACGGGGGTCTGCTATGGCAAAACCGCCTGTGCGTTCCCCGAGACGAGGGAATCTTAAAAGATATTATGACCGAAGCCCACGATACATCTTATGTGTTCCACCCTGGAAGTACAAAGATGTATCAGGATCTGAAGAGGTTTTACTGGTGGTCCGGAATGAAGAGGGACATAGCGGATTTCGTAAGCCGTTGCTTGACCTGCCAGCAGGTGAAGGCCCCGAGGCAGCGCCCAGCGGGATTGCTACAGCCCTTGAGCGTCCCTCAGTGGAAATGGGAAGCAGTCTGTATGGATTTCATTTCGGGTTTGCCAAAGACAAAGCAGGGTTTCAACGTCGTATGGGTAATTGTAGACAGACTGACTAAGACAGCCCACTTCATTCCAGGAAAGTCCACATATCGAGTAGACCGGTGGGCTCAGTTATATATCAAGGAGATAGTACGCCTGCACGAGGTACCAGTGTCCATAGTATCAGACCGGGACACCAGGTTCACCTCTCAGTTCTGGAGGAGTCTTCAGAAGGCACTAGGGACTCAGTTGAGGTTCAGTACAGCATTCCATCCTCAAACGGACGGACAGACCGAAAGGCTGAATCAGGTTTTAGAGGACATGTTGCGAGCCTGCTCCTTAGATTTCGCTGGGTGTTGGGACGAACATCTGCCTTTAATGGAGTTTGCCTACAACAATAGTTATCAAGCGACCATTCAGATGGCCCCCTTCGAGGCACTGTATGGGCGTAGGTGTCGAACACCAGTGTTTTGGGAAGAGGTAGGCACGCAGCAACTAATGGGACCAGAGTTGGTCCAGGTCACCAACGCAGTGGTGCAGAAAATCAAACAGAGGATACTCACCGCACAGAGTCGACAGAAAAGCTATGCAGATGTGCGTAGAAGGGACCTCAAATTTGAGGTGGGTGACCACGTGTTCCTGAAGGTGGCCCCTATGAGGGGGGTGTTGAGGTTTGGGAAGAAAGGGAAATTGAGCCCAAGGTTCATAGGCCCCTTCGAGATTCTGGACAGAGTCGGGGCTGTGGCTTACAGAATTGCCCTACCACCGAACCTTGCCGCCGTGCACAATGTGTTCCACGTATCCATGCTGCGAAAGTATACTCCCGACCCTACTCATGTAATCGAGCATGGGATGCTTCCTCTTCGAGAAGATCTGTCTTACGAGGAACAGCCTAGCAGGATTTTAGCTCGAGACACTAGGCGGTTGCGTAACAAAGATATTCCCTTGGTAAAGGTCTCATGGGGTAACCGCCGTGAGGAAGAGGCAACCTGGGAACGAGAAGAGGACGTGAGGAAAGCTTATCCCGAACTCTTCCAAGGGATAGCTACTTTCGGGGACGAAAGTTCCTAA
Homology
[Close]
BLAST of CmoCh14G010920 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.5e-144
Identity = 308/955 (32.25%), Postives = 513/955 (53.72%), Query Frame = 1 

Query: 583  LRAKKLIRSGAIAFLASVTLDNSNKQKTSSVH-------------------IVREFVDVF 642
            L  KK     AI+F    TL ++N + +SS H                   I +EF D+ 
Sbjct: 329  LVVKKFSHPAAISF---TTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDIT 388

Query: 643  PE-DLPGLP-PAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSV 702
             E +   LP P + ++F ++L      +    Y + P +++ + +++ + L  G IR S 
Sbjct: 389  AETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESK 448

Query: 703  SPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRS 762
            +    PV+FV KK+G++RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+ +DL+S
Sbjct: 449  AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKS 508

Query: 763  GYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFI 822
             YH +RVR+GD  K AFR   G +E+LVM + ++ APA F   +N +  E  ++ V+ ++
Sbjct: 509  AYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYM 568

Query: 823  DDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPA 882
            DDIL++SKSE++H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T    
Sbjct: 569  DDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE 628

Query: 883  KIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQS 942
             I+ V++W QP    E+R FLG   Y R+F+   S+++  L  L KK   + WTP   Q+
Sbjct: 629  NIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQA 688

Query: 943  FQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEY 1002
             + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + 
Sbjct: 689  IENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKA 748

Query: 1003 ERNYPTHDLELAAVVFALKTWRHYLYG--EKVQVFTDYKSLKYLFTQKE--LNMRQRRWL 1062
            + NY   D E+ A++ +LK WRHYL    E  ++ TD+++L    T +    N R  RW 
Sbjct: 749  QLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQ 808

Query: 1063 ELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKGGNVQ 1122
              ++D++ EI Y PG AN +ADALSR       ++   E +  + +   I+         
Sbjct: 809  LFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-------- 868

Query: 1123 IAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLL--WQNRLCVPRD 1182
            + Q++I    + +V+    +D  L  + +    ++ V  +I    GLL   ++++ +P D
Sbjct: 869  VNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPND 928

Query: 1183 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1242
              + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C TCQ  K+   
Sbjct: 929  TQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNH 988

Query: 1243 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVD 1302
            +P G LQP+   +  WE++ MDFI+ LP++  G+N ++V+VDR +K A  +P   +   +
Sbjct: 989  KPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAE 1048

Query: 1303 RWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1362
            + A+++ + ++     P  I++D D  FTSQ W+         ++FS  + PQTDGQTER
Sbjct: 1049 QTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTER 1108

Query: 1363 LNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEE 1422
             NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E
Sbjct: 1109 TNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLE 1168

Query: 1423 VGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL-KFEVGDHVFLKVAPM 1482
            + +      E  Q T  V Q +K+ + T   + K Y D++ +++ +F+ GD V +K    
Sbjct: 1169 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1228

Query: 1483 RGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHVSMLRKY 1504
             G L   K  KL+P F GPF +L + G   Y + LP ++  +  + FHVS L KY
Sbjct: 1229 TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of CmoCh14G010920 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.5e-144
Identity = 308/955 (32.25%), Postives = 513/955 (53.72%), Query Frame = 1 

Query: 583  LRAKKLIRSGAIAFLASVTLDNSNKQKTSSVH-------------------IVREFVDVF 642
            L  KK     AI+F    TL ++N + +SS H                   I +EF D+ 
Sbjct: 329  LVVKKFSHPAAISF---TTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDIT 388

Query: 643  PE-DLPGLP-PAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSV 702
             E +   LP P + ++F ++L      +    Y + P +++ + +++ + L  G IR S 
Sbjct: 389  AETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESK 448

Query: 703  SPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRS 762
            +    PV+FV KK+G++RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+ +DL+S
Sbjct: 449  AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKS 508

Query: 763  GYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFI 822
             YH +RVR+GD  K AFR   G +E+LVM + ++ APA F   +N +  E  ++ V+ ++
Sbjct: 509  AYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYM 568

Query: 823  DDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPA 882
            DDIL++SKSE++H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T    
Sbjct: 569  DDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE 628

Query: 883  KIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQS 942
             I+ V++W QP    E+R FLG   Y R+F+   S+++  L  L KK   + WTP   Q+
Sbjct: 629  NIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQA 688

Query: 943  FQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEY 1002
             + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + 
Sbjct: 689  IENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKA 748

Query: 1003 ERNYPTHDLELAAVVFALKTWRHYLYG--EKVQVFTDYKSLKYLFTQKE--LNMRQRRWL 1062
            + NY   D E+ A++ +LK WRHYL    E  ++ TD+++L    T +    N R  RW 
Sbjct: 749  QLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQ 808

Query: 1063 ELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKGGNVQ 1122
              ++D++ EI Y PG AN +ADALSR       ++   E +  + +   I+         
Sbjct: 809  LFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-------- 868

Query: 1123 IAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLL--WQNRLCVPRD 1182
            + Q++I    + +V+    +D  L  + +    ++ V  +I    GLL   ++++ +P D
Sbjct: 869  VNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPND 928

Query: 1183 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1242
              + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C TCQ  K+   
Sbjct: 929  TQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNH 988

Query: 1243 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVD 1302
            +P G LQP+   +  WE++ MDFI+ LP++  G+N ++V+VDR +K A  +P   +   +
Sbjct: 989  KPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAE 1048

Query: 1303 RWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1362
            + A+++ + ++     P  I++D D  FTSQ W+         ++FS  + PQTDGQTER
Sbjct: 1049 QTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTER 1108

Query: 1363 LNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEE 1422
             NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E
Sbjct: 1109 TNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLE 1168

Query: 1423 VGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL-KFEVGDHVFLKVAPM 1482
            + +      E  Q T  V Q +K+ + T   + K Y D++ +++ +F+ GD V +K    
Sbjct: 1169 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1228

Query: 1483 RGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHVSMLRKY 1504
             G L   K  KL+P F GPF +L + G   Y + LP ++  +  + FHVS L KY
Sbjct: 1229 TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of CmoCh14G010920 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.5e-144
Identity = 308/955 (32.25%), Postives = 513/955 (53.72%), Query Frame = 1 

Query: 583  LRAKKLIRSGAIAFLASVTLDNSNKQKTSSVH-------------------IVREFVDVF 642
            L  KK     AI+F    TL ++N + +SS H                   I +EF D+ 
Sbjct: 329  LVVKKFSHPAAISF---TTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDIT 388

Query: 643  PE-DLPGLP-PAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSV 702
             E +   LP P + ++F ++L      +    Y + P +++ + +++ + L  G IR S 
Sbjct: 389  AETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESK 448

Query: 703  SPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRS 762
            +    PV+FV KK+G++RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+ +DL+S
Sbjct: 449  AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKS 508

Query: 763  GYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFI 822
             YH +RVR+GD  K AFR   G +E+LVM + ++ APA F   +N +  E  ++ V+ ++
Sbjct: 509  AYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYM 568

Query: 823  DDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPA 882
            DDIL++SKSE++H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T    
Sbjct: 569  DDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE 628

Query: 883  KIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQS 942
             I+ V++W QP    E+R FLG   Y R+F+   S+++  L  L KK   + WTP   Q+
Sbjct: 629  NIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQA 688

Query: 943  FQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEY 1002
             + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + 
Sbjct: 689  IENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKA 748

Query: 1003 ERNYPTHDLELAAVVFALKTWRHYLYG--EKVQVFTDYKSLKYLFTQKE--LNMRQRRWL 1062
            + NY   D E+ A++ +LK WRHYL    E  ++ TD+++L    T +    N R  RW 
Sbjct: 749  QLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQ 808

Query: 1063 ELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKGGNVQ 1122
              ++D++ EI Y PG AN +ADALSR       ++   E +  + +   I+         
Sbjct: 809  LFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-------- 868

Query: 1123 IAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLL--WQNRLCVPRD 1182
            + Q++I    + +V+    +D  L  + +    ++ V  +I    GLL   ++++ +P D
Sbjct: 869  VNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPND 928

Query: 1183 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1242
              + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C TCQ  K+   
Sbjct: 929  TQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNH 988

Query: 1243 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVD 1302
            +P G LQP+   +  WE++ MDFI+ LP++  G+N ++V+VDR +K A  +P   +   +
Sbjct: 989  KPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAE 1048

Query: 1303 RWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1362
            + A+++ + ++     P  I++D D  FTSQ W+         ++FS  + PQTDGQTER
Sbjct: 1049 QTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTER 1108

Query: 1363 LNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEE 1422
             NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E
Sbjct: 1109 TNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLE 1168

Query: 1423 VGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL-KFEVGDHVFLKVAPM 1482
            + +      E  Q T  V Q +K+ + T   + K Y D++ +++ +F+ GD V +K    
Sbjct: 1169 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1228

Query: 1483 RGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHVSMLRKY 1504
             G L   K  KL+P F GPF +L + G   Y + LP ++  +  + FHVS L KY
Sbjct: 1229 TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of CmoCh14G010920 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.5e-144
Identity = 308/955 (32.25%), Postives = 513/955 (53.72%), Query Frame = 1 

Query: 583  LRAKKLIRSGAIAFLASVTLDNSNKQKTSSVH-------------------IVREFVDVF 642
            L  KK     AI+F    TL ++N + +SS H                   I +EF D+ 
Sbjct: 329  LVVKKFSHPAAISF---TTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDIT 388

Query: 643  PE-DLPGLP-PAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSV 702
             E +   LP P + ++F ++L      +    Y + P +++ + +++ + L  G IR S 
Sbjct: 389  AETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESK 448

Query: 703  SPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRS 762
            +    PV+FV KK+G++RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+ +DL+S
Sbjct: 449  AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKS 508

Query: 763  GYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFI 822
             YH +RVR+GD  K AFR   G +E+LVM + ++ APA F   +N +  E  ++ V+ ++
Sbjct: 509  AYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYM 568

Query: 823  DDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPA 882
            DDIL++SKSE++H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T    
Sbjct: 569  DDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE 628

Query: 883  KIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQS 942
             I+ V++W QP    E+R FLG   Y R+F+   S+++  L  L KK   + WTP   Q+
Sbjct: 629  NIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQA 688

Query: 943  FQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEY 1002
             + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + 
Sbjct: 689  IENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKA 748

Query: 1003 ERNYPTHDLELAAVVFALKTWRHYLYG--EKVQVFTDYKSLKYLFTQKE--LNMRQRRWL 1062
            + NY   D E+ A++ +LK WRHYL    E  ++ TD+++L    T +    N R  RW 
Sbjct: 749  QLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQ 808

Query: 1063 ELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKGGNVQ 1122
              ++D++ EI Y PG AN +ADALSR       ++   E +  + +   I+         
Sbjct: 809  LFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-------- 868

Query: 1123 IAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLL--WQNRLCVPRD 1182
            + Q++I    + +V+    +D  L  + +    ++ V  +I    GLL   ++++ +P D
Sbjct: 869  VNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPND 928

Query: 1183 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1242
              + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C TCQ  K+   
Sbjct: 929  TQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNH 988

Query: 1243 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVD 1302
            +P G LQP+   +  WE++ MDFI+ LP++  G+N ++V+VDR +K A  +P   +   +
Sbjct: 989  KPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAE 1048

Query: 1303 RWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1362
            + A+++ + ++     P  I++D D  FTSQ W+         ++FS  + PQTDGQTER
Sbjct: 1049 QTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTER 1108

Query: 1363 LNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEE 1422
             NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E
Sbjct: 1109 TNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLE 1168

Query: 1423 VGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL-KFEVGDHVFLKVAPM 1482
            + +      E  Q T  V Q +K+ + T   + K Y D++ +++ +F+ GD V +K    
Sbjct: 1169 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1228

Query: 1483 RGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHVSMLRKY 1504
             G L   K  KL+P F GPF +L + G   Y + LP ++  +  + FHVS L KY
Sbjct: 1229 TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of CmoCh14G010920 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.5e-144
Identity = 308/955 (32.25%), Postives = 513/955 (53.72%), Query Frame = 1 

Query: 583  LRAKKLIRSGAIAFLASVTLDNSNKQKTSSVH-------------------IVREFVDVF 642
            L  KK     AI+F    TL ++N + +SS H                   I +EF D+ 
Sbjct: 329  LVVKKFSHPAAISF---TTLYDNNIEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDIT 388

Query: 643  PE-DLPGLP-PAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSV 702
             E +   LP P + ++F ++L      +    Y + P +++ + +++ + L  G IR S 
Sbjct: 389  AETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESK 448

Query: 703  SPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRS 762
            +    PV+FV KK+G++RM +DY+ LNK    N YPLP I+ L  ++QG+T+F+ +DL+S
Sbjct: 449  AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKS 508

Query: 763  GYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFI 822
             YH +RVR+GD  K AFR   G +E+LVM + ++ APA F   +N +  E  ++ V+ ++
Sbjct: 509  AYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYM 568

Query: 823  DDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPA 882
            DDIL++SKSE++H  H++ VL  L+   L    +KCEF  S+V F+G+ +S KG T    
Sbjct: 569  DDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE 628

Query: 883  KIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQS 942
             I+ V++W QP    E+R FLG   Y R+F+   S+++  L  L KK   + WTP   Q+
Sbjct: 629  NIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQA 688

Query: 943  FQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGK-----VIAYASRQLKEY 1002
             + +K+ LV+ PVL   D S  +++ +DAS   +G VL QK        + Y S ++ + 
Sbjct: 689  IENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKA 748

Query: 1003 ERNYPTHDLELAAVVFALKTWRHYLYG--EKVQVFTDYKSLKYLFTQKE--LNMRQRRWL 1062
            + NY   D E+ A++ +LK WRHYL    E  ++ TD+++L    T +    N R  RW 
Sbjct: 749  QLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQ 808

Query: 1063 ELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKGGNVQ 1122
              ++D++ EI Y PG AN +ADALSR       ++   E +  + +   I+         
Sbjct: 809  LFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-------- 868

Query: 1123 IAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLL--WQNRLCVPRD 1182
            + Q++I    + +V+    +D  L  + +    ++ V  +I    GLL   ++++ +P D
Sbjct: 869  VNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPND 928

Query: 1183 EGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQ 1242
              + + I+ + H+   + HPG   +   + R + W G+++ I ++V  C TCQ  K+   
Sbjct: 929  TQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNH 988

Query: 1243 RPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVD 1302
            +P G LQP+   +  WE++ MDFI+ LP++  G+N ++V+VDR +K A  +P   +   +
Sbjct: 989  KPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAE 1048

Query: 1303 RWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTER 1362
            + A+++ + ++     P  I++D D  FTSQ W+         ++FS  + PQTDGQTER
Sbjct: 1049 QTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTER 1108

Query: 1363 LNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEE 1422
             NQ +E +LR         W +H+ L++ +YNN+  +  QM PFE ++  R    +   E
Sbjct: 1109 TNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLE 1168

Query: 1423 VGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL-KFEVGDHVFLKVAPM 1482
            + +      E  Q T  V Q +K+ + T   + K Y D++ +++ +F+ GD V +K    
Sbjct: 1169 LPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTK 1228

Query: 1483 RGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAV-HNVFHVSMLRKY 1504
             G L   K  KL+P F GPF +L + G   Y + LP ++  +  + FHVS L KY
Sbjct: 1229 TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of CmoCh14G010920 vs. TrEMBL
Match: Q84KB0_CUCME (Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 670/921 (72.75%), Postives = 792/921 (85.99%), Query Frame = 1 

Query: 656  MAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNK 715
            MAPAEL+ELK QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+CIDYRELNKVT+ N+
Sbjct: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 716  YPLPRIDDLFDQLQGATVFSNIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLT 775
            YPLPRIDDLFDQLQGATVFS IDLRSGYHQLR+++ D+PKTAFRSRYGHY+F+VMSF LT
Sbjct: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 776  NAPAVFMELMNRVFKEFLDTFVLVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFS 835
            NAPAVFM+LMNRVF+EFLDTFV+VFIDDIL+YSK+EA+HE HLR VL  LR  +LYAKFS
Sbjct: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 836  KCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDF 895
            KCEFWL +V+FLGHVVS  G++VDPAKIEAV  W +P+TV+EVRSFLGLAGYYRRFV++F
Sbjct: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 896  SKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGL 955
            S+I++ LTQLT+KG PF W+  CE SFQ LK++LVTAPVLTVPDGSGN V+YSDAS KGL
Sbjct: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 956  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYKSL 1015
            GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEK+Q+FTD+KSL
Sbjct: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 1016 KYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQD 1075
            KY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRK  H++ +IT Q  L  
Sbjct: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420

Query: 1076 EMKRAGIDVMIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISS 1135
            +++RA I V++    +Q+AQLT+QPTLR+++IDAQ +D +L +     E  +   +S+SS
Sbjct: 421  DLERAEIAVLVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480

Query: 1136 NGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKR-FYWWSGMKRDIAD 1195
            +GGLL++ RLCVP D  +  ++++EAH + +  HPGST+     +  F     MKR++A+
Sbjct: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAE 540

Query: 1196 FVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRL 1255
            FVS+CL CQQVKAPRQ+PAGLLQPLS+P+WKWE V MDFI+GLP+T +GF V+WV+VDRL
Sbjct: 541  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRL 600

Query: 1256 TKTAHFIPGKSTYRVDRWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQL 1315
            TK+AHF+PGKSTY   +WAQLY+ EIVRLH VPVSIVSDRD RFTS+FW+ LQ A+GT+L
Sbjct: 601  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL 660

Query: 1316 RFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPF 1375
             FSTAFHPQTDGQTERLNQVLEDMLRAC+L+F G WD HL LMEFAYNNSYQATI MAPF
Sbjct: 661  DFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPF 720

Query: 1376 EALYGRRCRTPVFWEEVGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL 1435
            EALYGR CR+PV W EVG Q+LMGPELVQ TN  +QKI+ R+ TAQSRQKSYADVRR+DL
Sbjct: 721  EALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 780

Query: 1436 KFEVGDHVFLKVAPMRGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNV 1495
            +FEVGD VFLKVAPM+GVLRF ++GKLSPRF+GPFEIL+R+G VAYR+ALPP+L+ VH+V
Sbjct: 781  EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDV 840

Query: 1496 FHVSMLRKYTPDPTHVIEHGMLPLREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGNR 1555
            FHVSMLRKY PDP+HV+++  L + E+LSY EQP  +LAR  + LRNK IPLVKV W N 
Sbjct: 841  FHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVKVLWRNH 900

Query: 1556 REEEATWEREEDVRKAYPELF 1576
            R EEATWERE+D+R  YPELF
Sbjct: 901  RVEEATWEREDDMRSRYPELF 921

[Close]
BLAST of CmoCh14G010920 vs. TrEMBL
Match: A0A061EEG7_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_018243 PE=4 SV=1)

HSP 1 Score: 1399.4 bits (3621), Expect = 0.0e+00
Identity = 686/1162 (59.04%), Postives = 864/1162 (74.35%), Query Frame = 1 

Query: 416  PAVQHQRGQAGQHQQGRAVAH--ATTARQADQPDAVVTGTLPVFGHLALVLFDSGSTHSF 475
            P+  H   Q   H  GR  A   A T ++A   +AVV+G L V    A VLFD G+THSF
Sbjct: 312  PSQLHLLRQLLSHLAGRGQARVFALTQQEAQTSNAVVSGILSVCNMNARVLFDPGATHSF 371

Query: 476  VSEEFVELAQLEKELLEITLSVSTPAHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDF 535
            +S  F       +   E  L VSTP  E+ +A    +   V +  +     L+VL   DF
Sbjct: 372  ISTCFASRLGRGRVRREEQLVVSTPLKEIFVAEWEYESCVVRVKDKDTSVNLVVLDTLDF 431

Query: 536  DVILGMDWLGGNRVLIDCETRIVTLRLPSGDIFTYKGATSKGVPSVITSLRAKKLIRSGA 595
            DVILGM+WL      +DC  ++V    P    F+ +G  S    ++I+ + A++L+R G 
Sbjct: 432  DVILGMNWLSPCHASVDCYHKLVRFDFPGEPSFSIQGDRSNAPTNLISVISARRLLRQGC 491

Query: 596  IAFLASVTLDNSNKQKTSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTMPISKAP 655
            I +LA V    +     + V +V+EFVDVFPE+LP LPP REV+F IDL P T PIS  P
Sbjct: 492  IGYLAVVKDSQAKIGDVTQVSVVKEFVDVFPEELPSLPPEREVEFCIDLIPDTRPISIPP 551

Query: 656  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIM 715
            YRMAPAEL+ELK+QL++LLDKGFIRPSVSPWGAPVLFVKKKDGS+R+CIDYR+LNKVT+ 
Sbjct: 552  YRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRQLNKVTVK 611

Query: 716  NKYPLPRIDDLFDQLQGATVFSNIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFS 775
            NKYPLPRIDDLFDQLQGA  FS IDLRSGYHQLR+R  DIPKTAFR+RYGHYEFLVMSF 
Sbjct: 612  NKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFG 671

Query: 776  LTNAPAVFMELMNRVFKEFLDTFVLVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 835
            LTNAPA FM+LMNRVFK +LD FV+VFIDDIL+YSKS  +HE HL+ VL ILR  +LYAK
Sbjct: 672  LTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLKIVLQILREHRLYAK 731

Query: 836  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 895
            FSKCEFWL  VAFLGHVVS +GI VD  KIEAV +WP+PT+V+E+RSF+GLAGYYRRFV+
Sbjct: 732  FSKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVSEIRSFVGLAGYYRRFVK 791

Query: 896  DFSKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 955
            DFSKI + LT+LT+K   F W+  CE SF++LK  L TAPVL++P G+G   ++ DASG 
Sbjct: 792  DFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTMFCDASGV 851

Query: 956  GLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYK 1015
            GLGCVLMQ GKVIAYASRQLK +E+NYP HDLE+AA+VFALK WRHYLYGE  +++TD+K
Sbjct: 852  GLGCVLMQHGKVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHK 911

Query: 1016 SLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKL 1075
            SLKY+F Q++LN+RQ RW+EL+KDYD  ILYHPGKANVVADALSRK++ +   I+     
Sbjct: 912  SLKYIFQQRDLNLRQCRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHIS----- 971

Query: 1076 QDEMKRAGIDVMIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSI 1135
                                    ++P L  K+ +AQ  DE + K     +  +   ++ 
Sbjct: 972  -----------------------IVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTK 1031

Query: 1136 SSNGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIA 1195
             ++G L +  RL VP  +G+ ++I+ EAH  +YV HPG+TKMYQDLK  YWW G+KRD+A
Sbjct: 1032 GTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVA 1091

Query: 1196 DFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDR 1255
            +FVS+CL CQQVKA  Q+PAGLLQPL VP+WKWE + MDF++GLP+T  G++ +W++VDR
Sbjct: 1092 EFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDR 1151

Query: 1256 LTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQ 1315
            LTK+AHF+P K+TY   ++A++Y+ EIVRLH +P+SIVSDR  +FTS+FW  LQ+ALGT+
Sbjct: 1152 LTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALGTK 1211

Query: 1316 LRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAP 1375
            L FSTAFHPQTDGQ+ER  Q LE MLRAC +D    W+++LPL+EFAYNNS+Q +IQMAP
Sbjct: 1212 LDFSTAFHPQTDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAP 1271

Query: 1376 FEALYGRRCRTPVFWEEVGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRD 1435
            FEALYGRRCR+P+ W EVG ++L+GPELVQ     +  I+QR+LTAQSRQKSYAD RRRD
Sbjct: 1272 FEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRD 1331

Query: 1436 LKFEVGDHVFLKVAPMRGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHN 1495
            L+F+VGDHVFLKV+P +GV+RFGKKGKLSPR+IGPFEIL++VGAVAYR+ALPP+L+ +H 
Sbjct: 1332 LEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIHP 1391

Query: 1496 VFHVSMLRKYTPDPTHVIEHGMLPLREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGN 1555
            VFHVSMLRKY PDP+HVI +  + L++DL+YEEQP  IL R  ++LR+KD+  VKV W N
Sbjct: 1392 VFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVLWRN 1445

Query: 1556 RREEEATWEREEDVRKAYPELF 1576
               EE TWE E+++R  +P LF
Sbjct: 1452 HTSEEVTWEAEDEMRTKHPHLF 1445

[Close]
BLAST of CmoCh14G010920 vs. TrEMBL
Match: Q6L3S2_SOLDE (Putative retrotransposon protein, identical OS=Solanum demissum GN=SDM1_41t00017 PE=4 SV=1)

HSP 1 Score: 1399.4 bits (3621), Expect = 0.0e+00
Identity = 748/1453 (51.48%), Postives = 968/1453 (66.62%), Query Frame = 1 

Query: 179  DSGTMTVESRYLRDFQRHKPPSFDEGKMDLIAAENWLEAIETAF--HFMNCPPNLKTHTS 238
            D+  + + +  L+D  R     +  G+++   + +W    E AF  HF   P  LK    
Sbjct: 166  DTERVELAAYQLKDVARTWLDQWKGGRVENAPSASWAN-FEEAFLGHFF--PRELKE--- 225

Query: 239  TNTTQITARVKMQAAFLALKQGDRSVGDYDLEFNRLARFSPAYVSSEELKGERFIAGLRE 298
                   A+V+    FL LKQ   SV +Y L+F +L+R++P  V+    +   F+AGL  
Sbjct: 226  -------AKVR---EFLTLKQEPLSVREYSLKFTQLSRYAPEMVADMRNRMSLFVAGLSR 285

Query: 299  ---------ELRGNVASQSSFVYTKALQVATLLDSP--RTDKLQLGIAQSSHTAAQGKGA 358
                      L G++      VY + ++   L D    R+ + + G           + +
Sbjct: 286  LSSKEGRAAMLIGDMDISRLMVYVQQVEEEKLRDREEFRSKRAKTGNEPGQQKGNANRPS 345

Query: 359  YPSHPRTGRP-------PRGRTDRRGR-------APVRN-------MTLCPNCR---RPH 418
            +    +   P       PR R    G+        PV++        +L P C    R H
Sbjct: 346  FQERQKGPAPSSVSAPAPRYRGGHNGQNSKDFKARPVQSSGSVAQRSSLFPACARCGRTH 405

Query: 419  TGECRAGTGACYRCGQVGHFAVDCPQRNDQRVNL-----------PAVQHQRGQAGQHQQ 478
             G+CR G   C++CGQ GHF  +CP+ N    +L           P     RG       
Sbjct: 406  PGKCRDGQTGCFKCGQEGHFVKECPKNNQGSGSLGSRTQSSSVAPPDRMTPRGATSSTGG 465

Query: 479  GRAVAHATTAR--QADQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKEL 538
            G    +A T+R  Q + P+ VVT  + VF      L D G++ SFV+        +  E 
Sbjct: 466  GANRLYAITSRHEQENSPN-VVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPER 525

Query: 539  LEITLSVSTPAHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDFDVILGMDWLGGNRVL 598
            L     VSTP  E +LA    +   V+I  +     LI L M DFDVILGMDWL      
Sbjct: 526  LCEPFCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMVDFDVILGMDWLHACYAS 585

Query: 599  IDCETRIVTLRLPSGDIFTYKGATSKGVPSVITSLRAKKLIRSGAIAFLASVTLDNSNKQ 658
            IDC TR+V  + PS  I  +  +++      I+ L+A+KL+  G I  LA V   +    
Sbjct: 586  IDCRTRVVKFQFPSEPILEWSSSSAVPKGRFISYLKARKLVSKGCIYHLARVNDSSVEIP 645

Query: 659  KTSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQL 718
               SV IVREF +VFP+DLPG+PP RE+DFGIDL P T PIS  PYRMAPAEL+ELK   
Sbjct: 646  YFQSVPIVREFPEVFPDDLPGIPPEREIDFGIDLIPDTRPISIPPYRMAPAELKELK--- 705

Query: 719  QELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQL 778
             +LL+KGFIRPSVSPWGAPVLFV+KKDGS+R+CIDYR+LNKVTI NKYPLPRIDDLFDQL
Sbjct: 706  -DLLEKGFIRPSVSPWGAPVLFVRKKDGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQL 765

Query: 779  QGATVFSNIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRV 838
            QGAT FS IDLRSGYHQLRVRE DIPKTAFR+RYGHYEFLVMSF LTNAPA FM+LMNRV
Sbjct: 766  QGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRV 825

Query: 839  FKEFLDTFVLVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLG 898
            F+ +LD FV++FIDDIL+YS++E DH  HLR VL  L+ ++LYAKFSKCEFWL  VAFLG
Sbjct: 826  FRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLG 885

Query: 899  HVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKK 958
            H+VS  GI VD  KIEAV  WP+PT+ TE+RSFLGLAGYYRRFV+ FS I+S LT+LT+K
Sbjct: 886  HIVSGDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLTKLTQK 945

Query: 959  GKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAY 1018
               F W+  CE+SFQELKKRL+TAPVLT+P+G+  LVVY DAS  GLGCVLMQ GKVIAY
Sbjct: 946  TGKFQWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYCDASRIGLGCVLMQNGKVIAY 1005

Query: 1019 ASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYKSLKYLFTQKELNMRQ 1078
            ASRQLK +E+NYPTHDLELA VVFALK WRHYLYG  V +FTD+KSL+Y+ TQK LN+RQ
Sbjct: 1006 ASRQLKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKALNLRQ 1065

Query: 1079 RRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMIT--TQEKLQDEMKRAGIDVMI 1138
            RRWLEL+KDYD+ ILYHPGKANVVAD+LSR ++ ++  I    +E  +D  + A + V  
Sbjct: 1066 RRWLELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRF 1125

Query: 1139 KG---GNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLLWQN 1198
                 G + +     + +L  +V + Q  D  L ++ + ++ +R + +    +G L +Q 
Sbjct: 1126 TDSTEGGIAVTS-KAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVLRYQG 1185

Query: 1199 RLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQ 1258
            RLCVP  +G+ + +M EAH + Y  HPGSTKMY+DL+ FYWW+GMK+ IA+FV++C  CQ
Sbjct: 1186 RLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCPNCQ 1245

Query: 1259 QVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPG 1318
            QVK   QRP GL Q + +P+WKWE + MDFI+GLP++++  + +WVIVDR+TK+AHF+P 
Sbjct: 1246 QVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHFLPV 1305

Query: 1319 KSTYRVDRWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQ 1378
            K+T+  + +A+LYI+EIVRLH VP+SI+SDR  +FT+QFW+S QK LG+++  STAFHPQ
Sbjct: 1306 KTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQ 1365

Query: 1379 TDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCR 1438
            TDGQ ER  Q LEDMLRAC +DF   WD+HLPL+EFAYNNSY ++IQMAP+EALYGRRCR
Sbjct: 1366 TDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCR 1425

Query: 1439 TPVFWEEVGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDLKFEVGDHVF 1498
            +P+ W EVG  +L+GP+LV      V+ I++R+ TAQSRQKSY DVRRR L+FEV D V+
Sbjct: 1426 SPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDDWVY 1485

Query: 1499 LKVAPMRGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHVSMLRKY 1558
            LKV+PM+GV+RFGKKGKLSPR+IGP+ I+ RVG+VAY + LP  LAAVH VFH+SML+K 
Sbjct: 1486 LKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHPVFHISMLKKC 1545

Query: 1559 TPDPTHVIEHGMLPLREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGNRREEEATWER 1577
              DP+ ++    + ++++LSYEE P +IL R  RRLR KD+  VKV W N+  EEATWE 
Sbjct: 1546 IGDPSLILPTESVKIKDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRNQFVEEATWEA 1596

[Close]
BLAST of CmoCh14G010920 vs. TrEMBL
Match: A2I5E5_BETVU (Retrotransposon protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 1380.9 bits (3573), Expect = 0.0e+00
Identity = 706/1371 (51.50%), Postives = 927/1371 (67.61%), Query Frame = 1 

Query: 252  FLALKQGDRSVGDYDLEFNRLARFSPAYVSSEELKGERFIAGLREELR----GNVASQSS 311
            F+ L+ G  ++ +Y  +F  L+RF+P  V++EELK +RF  GL +E++    G   +   
Sbjct: 129  FINLRMGSMTISEYYSKFIALSRFAPEVVATEELKAQRFEQGLTDEIQLGLGGETFTSLD 188

Query: 312  FVYTKALQVATLLDSPRTDKLQLGIAQSSHTAAQGKGAYPSHPRTGR---PPRGRTDRRG 371
             VY +A  +  L  S R  K  +   +    +  G        R G      R   D R 
Sbjct: 189  VVYGRASHIYGL-QSRRDKKAGIVGEKRKEVSTGGNQNNFKKNRNGNGNFQGRNNQDNRS 248

Query: 372  RAPVRNMTLCPNCRRPHTG-ECRAGTGACYRCGQVGHFAVDCPQR-----------NDQR 431
            +     + +C  C + H G +C+     C+ C + GH   +C  +           N  R
Sbjct: 249  QGRPERVHICKFCDKNHPGKDCKGELVTCHYCQKKGHREYECYTKHGKGLKIQGNGNQAR 308

Query: 432  VNLPAVQHQR----GQAGQHQQGRAVAHATTAR-------------QADQPDAVVTGTLP 491
                 + +Q     GQ  Q    R  A+  +A+             +A++   VVTG   
Sbjct: 309  PGSNQIGNQGPKPGGQNNQGNHSRPAANDNSAQNKPAGKVFVMSHNEAERSADVVTGNFS 368

Query: 492  VFGHLALVLFDSGSTHSFVSEEFVE-LAQLEKELLEITLSVSTPAHELLLATHRVKGGGV 551
            +       LFDSG+T+SF+S   ++ L  +E E   I LSVS P  E++  T   K   +
Sbjct: 369  INSVFVKTLFDSGATYSFISPSVLKSLGLVEHE--SIDLSVSIPTGEVVKCTKLFKNLPL 428

Query: 552  TIAGRVIEATLIVLRMQDFDVILGMDWLGGNRVLIDCETRIVTLRLPSGDIFTYKGATSK 611
             I G V  + LI   + D DVILGM+WL   +  IDCE + V LR PSG   +Y+     
Sbjct: 429  KIGGSVFPSELIEFNLGDLDVILGMNWLSLYKARIDCEVQKVVLRNPSGKFTSYRRFGKP 488

Query: 612  GVPSVITSLRAKKLIRSGAIAFLASVT-LDNSNKQKTSSVHIVREFVDVFPEDLPGLPPA 671
                VI++L+ +KL+R G   F  SV  +    + K   V IV EF+DVFP ++ G+PPA
Sbjct: 489  KNFGVISALQVQKLMRKGCELFFCSVQDVSKEAELKLEDVSIVNEFMDVFPSEISGMPPA 548

Query: 672  REVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKK 731
            R V+F IDL PGT PISKAPYRMAP E+ ELK QLQELLDKG+IRPS SPWGAPVLFVKK
Sbjct: 549  RAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQLQELLDKGYIRPSASPWGAPVLFVKK 608

Query: 732  KDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRSGYHQLRVREGDI 791
            KDGSMR+CIDYRELN VTI NKYPLPRIDDLFDQL GA+VFS IDLRSGYHQLRV + D+
Sbjct: 609  KDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLNGASVFSKIDLRSGYHQLRVADKDV 668

Query: 792  PKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFIDDILVYSKSEAD 851
            PKTAFR+RYGHYEF VM F LTNAPA+FM+LMNR+F EFLD FV+VFIDDIL+YS++E +
Sbjct: 669  PKTAFRTRYGHYEFTVMPFGLTNAPAIFMDLMNRIFHEFLDKFVVVFIDDILIYSRNETE 728

Query: 852  HEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPT 911
            H+ HLR +L  LR  QLYAKFSKCEF L +VAFLGH VS +G++VDPAKI+AV  WP P 
Sbjct: 729  HDEHLRIILETLRKNQLYAKFSKCEFRLEKVAFLGHFVSKEGVSVDPAKIQAVSEWPTPK 788

Query: 912  TVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAP 971
            +VT++RSFLGLAGYYRRFV+DFSKI+  +T L KK   F W   CE++FQ LK RL TAP
Sbjct: 789  SVTDIRSFLGLAGYYRRFVRDFSKIARPMTNLMKKETKFEWNEKCEEAFQILKDRLTTAP 848

Query: 972  VLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFA 1031
            VLT+PDG+    VYSDAS  GLGCVL Q GKVIAYAS QLK YE NYPTHDLELAA+VFA
Sbjct: 849  VLTLPDGNEGFEVYSDASKNGLGCVLQQNGKVIAYASCQLKPYEANYPTHDLELAAIVFA 908

Query: 1032 LKTWRHYLYGEKVQVFTDYKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVA 1091
            LK WRHYLYG   ++FTD+KSLKY+FTQK+LNMRQRRWLEL+KDYD++I YH GKANVVA
Sbjct: 909  LKIWRHYLYGATCKIFTDHKSLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVA 968

Query: 1092 DALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKG-GNVQIAQLTIQPTLRKKVIDAQRS 1151
            DALSRK+ H+   +   E+L  +MKR  ++++  G    +++ L++  ++  ++I+ Q  
Sbjct: 969  DALSRKSSHSLSTLIVPEELCRDMKRLNLEILNPGESEARLSNLSLGVSIFDEIIEGQVG 1028

Query: 1152 DEHLSKVWSQIETERPVGYSISSNGGLLWQNRLCVPRDEGILK-DIMTEAHDTSYVFHPG 1211
            DEHL K+  +++  + + + I  +G L ++ R CVP+    LK  +M E H+T Y  HPG
Sbjct: 1029 DEHLDKIKEKMKQGKEIDFKIHEDGSLRFKGRWCVPQKCNDLKRRLMDEGHNTPYSVHPG 1088

Query: 1212 STKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCM 1271
              K+Y+DLK  YWW  MKR++A++VS+CLTCQ+VK   +RP G +QPL VP WKW+++ M
Sbjct: 1089 GDKLYKDLKVIYWWPNMKREVAEYVSKCLTCQKVKIDHKRPMGTVQPLEVPGWKWDSISM 1148

Query: 1272 DFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHEVPVSIV 1331
            DF++ LPK++ G + +WVIVDRLTK+A FIP K T++  + A  YIK +VRLH VP  I+
Sbjct: 1149 DFVTALPKSRSGNDTIWVIVDRLTKSAVFIPIKETWKKKQLATTYIKHVVRLHGVPKDII 1208

Query: 1332 SDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWD 1391
            SDRD+RF S+FW+ +Q  LGT L+ STAFHP TDGQTER NQ +EDMLRAC++DF G W+
Sbjct: 1209 SDRDSRFLSKFWKKVQANLGTTLKMSTAFHPATDGQTERTNQTMEDMLRACAIDFQGSWE 1268

Query: 1392 EHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGPELVQVTNAVVQK 1451
            + L L+EF+YNNSY A+I+MAPFEALYGR+CR+P+ W +     ++G E ++ T   V+ 
Sbjct: 1269 DQLDLIEFSYNNSYHASIKMAPFEALYGRKCRSPICWNDYSENVVLGTEFIEETVKNVRL 1328

Query: 1452 IKQRILTAQSRQKSYADVRRRDLKFEVGDHVFLKVAPMRGVLRFGKKGKLSPRFIGPFEI 1511
            I+ RI  AQ RQKSYAD++RR+ +F VGD VFLKV+P +GV+RFGKKGKLS +++GP+EI
Sbjct: 1329 IQARIQAAQDRQKSYADLKRREDEFAVGDKVFLKVSPTKGVMRFGKKGKLSAKYVGPYEI 1388

Query: 1512 LDRVGAVAYRIALPPNLAAVHNVFHVSMLRKYTPDPTHVIEHGMLPLREDLSYEEQPSRI 1571
            L+R+G VAYR+ALP     +H+VFH+S L++Y PD  HV+E   + +   L+YEE+P +I
Sbjct: 1389 LERIGKVAYRLALPMEFEKMHDVFHISQLKRYIPDERHVLEPERVQIDSSLTYEERPVKI 1448

Query: 1572 LARDTRRLRNKDIPLVKVSWGNRREEEATWEREEDVRKAYPELFQGIATFG 1583
            L R  R  RNKD+ +VKV W N   EEATWE EED++K YP+LF  ++  G
Sbjct: 1449 LDRKVRSTRNKDVHIVKVLWSNHESEEATWEAEEDMKKKYPDLFLEVSYEG 1496

[Close]
BLAST of CmoCh14G010920 vs. TrEMBL
Match: M5VK25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1)

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 720/1378 (52.25%), Postives = 944/1378 (68.51%), Query Frame = 1 

Query: 210  AAENWLEAIETAFHFMNCPPNLKTHTSTNTTQITARVKMQAAFLALKQGDRSVGDYDLEF 269
            AA NW E  +  F     PP+              R   ++ FL LKQG  SV +Y+ +F
Sbjct: 142  AAINW-EEFQRVFSEQFYPPSY-------------RHAKKSEFLYLKQGSMSVMEYEHKF 201

Query: 270  NRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTDKLQ 329
            N L+RF+P  V++EE +  RF  GL  E++  V + +++   +AL  A    S    KL 
Sbjct: 202  NELSRFAPELVATEEDRCRRFEEGLWWEIQA-VITANTYPNMRALAHAVERVSR---KLG 261

Query: 330  LGIAQSSHTAAQGKGAYPSHPRTGRPPRGRTDRRGRAPVRNMTLCPNCRRPHTGECRAGT 389
              + +               P  G P +G + R G +           R   +   R+G+
Sbjct: 262  GNVGRRRRDT----------PGIGGPSQGPSKRGGSSSSSASGGWSEGRGSSSSSGRSGS 321

Query: 390  GACYR--CGQVGHFAVD--CPQRNDQRVNLPAVQHQRGQAGQHQQGRAVAHATTAR---- 449
               +    G     A+    P       +  A    RG++G+  +G+     T AR    
Sbjct: 322  RPAWTQYSGHSLQLALPGLLPGTLAGSSSSKAPSSSRGRSGRQSRGQPGRSTTQARVFSM 381

Query: 450  ---QADQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLEITLSVSTP 509
               +A     V+TG +P+FG+LA VL D G+THSFV+  F+    +    +  + S+S P
Sbjct: 382  TQQEAYATPDVITGMIPIFGYLARVLIDPGATHSFVAHNFIPYISIRPTPITGSFSISLP 441

Query: 510  AHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDFDVILGMDWLGGNRVLIDCETRIVTL 569
              E+L A    +   V +    +EA LI L + D D+ILGMDWL  +   +DC  + VTL
Sbjct: 442  TGEVLYADRVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLEKHHASVDCFRKEVTL 501

Query: 570  RLPSGDIFTYKGATSKGVPSVITSLRAKKLIRSGAIAFLASVTLDNSNKQKTSSVHIVRE 629
            R P     T++G        +I+++ AKKL++ G   +LA +            + +V E
Sbjct: 502  RSPGQPKVTFRGERRVLPTCLISAITAKKLLKKGYEGYLAHIIDTREITLNLEDIPVVCE 561

Query: 630  FVDVFPEDLPGLPPAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIR 689
            F ++FP+DLPGLPP RE++F ID  PGT PI + PYRMAPAELRELK QLQEL+D  FIR
Sbjct: 562  FPNIFPDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIR 621

Query: 690  PSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNID 749
            PSVSPWGAPVLFV+K+DG+MR+CIDYR+LNKVTI N+YPLPRIDDLFDQL+GA  FS ID
Sbjct: 622  PSVSPWGAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRIDDLFDQLKGAKYFSKID 681

Query: 750  LRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVL 809
            LRSGYHQLR+RE DIP TA R+RYGHYEFLVM F LTNAPA FM+LMNRVF+ +LD FV+
Sbjct: 682  LRSGYHQLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRPYLDHFVI 741

Query: 810  VFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITV 869
            VFIDDILVYS++   H+ HLR VL  LR +QLYAKFSKC+FWL  V FLGHV+S++GI V
Sbjct: 742  VFIDDILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHVISAEGIYV 801

Query: 870  DPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVC 929
            DP K+EA++ W Q T+VTE+RSFLGLAGYYRRFV+ FS I++ LT+LT+K   F WT  C
Sbjct: 802  DPQKVEAIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEEC 861

Query: 930  EQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYER 989
            EQSFQELKKRL TAPVL +PD +GN V+YSDAS +GLGCVLMQ  +VIAYASRQLK++E+
Sbjct: 862  EQSFQELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKKHEQ 921

Query: 990  NYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYKSLKYLFTQKELNMRQRRWLELVKDY 1049
            NYP HDLELAAVVFALK WRHYLYGE  Q+FTD+KSLKY FTQ+ELNMRQRRWLEL+KDY
Sbjct: 922  NYPVHDLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDY 981

Query: 1050 DIEILYHPGKANVVADALSRKAVHTSVMI-TTQEKLQDEMKRAGIDVMIKGGNVQIAQLT 1109
            D  I Y+PG+ANVVADALSRK   +   + TT   L  E+++ G+++ +      +A L 
Sbjct: 982  DCTIEYYPGRANVVADALSRKTTGSLTHLRTTYLPLLVELRKDGVELEMTQQGGILASLH 1041

Query: 1110 IQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLLWQNRLCVPRDEGILKDI 1169
            ++P L +++I AQ  D  L ++  ++E+     Y+I  +G L+   RL VP+++ + ++I
Sbjct: 1042 VRPILVERIIVAQLGDPTLCRIRGEVESGSRKDYAIRGDGALVTGTRLHVPKNDYLKREI 1101

Query: 1170 MTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQ 1229
            + EAH ++Y  HPGSTKMY+ L+ +Y W  MK DIA +VSRCL CQQVKA RQ+P+GL+Q
Sbjct: 1102 LEEAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSRCLICQQVKAERQKPSGLMQ 1161

Query: 1230 PLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVDRWAQLYI 1289
            PL +P+WKWE + MDF+  LP+T +G + +WVIVDRLTK+ HF+P K TY + + A+L++
Sbjct: 1162 PLPIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKSTHFLPIKETYSLTKLAKLFV 1221

Query: 1290 KEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTERLNQVLED 1349
             EIVRLH  PVSIVSDRD RFTS+FW+ LQ+A+GT+L+FSTAFHPQTDGQ+ER  Q LED
Sbjct: 1222 DEIVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFSTAFHPQTDGQSERTIQTLED 1281

Query: 1350 MLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM 1409
            MLR+C L     WD HL L+EFAYNNSY A+I+MAP+EALYGR+CRTP+ W EVG ++L 
Sbjct: 1282 MLRSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALYGRQCRTPICWNEVGDKKLE 1341

Query: 1410 GPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDLKFEVGDHVFLKVAPMRGVLRFGK 1469
              + +Q T   V+ IK+++  AQ RQKSYAD R +DL+F VGD VFLK++P +GV+RFGK
Sbjct: 1342 KVDSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDWVFLKLSPWKGVMRFGK 1401

Query: 1470 KGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHVSMLRKYTPDPTHVIEHGMLP 1529
            +GKLSPR+IGP+EI +R+G VAYR+ALP  L+ VH+VFHVSMLRKY  DP+H++E+  + 
Sbjct: 1402 RGKLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLRKYMSDPSHILEYQPVE 1461

Query: 1530 LREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGNRREEEATWEREEDVRKAYPELF 1576
            + EDLSYEEQP +IL R  + LR++ IP+VKV W ++  EEATWE E  +R  YP LF
Sbjct: 1462 VEEDLSYEEQPVQILDRKEQMLRSRFIPVVKVLWRSQTVEEATWEPEAQMRVKYPYLF 1491

[Close]
BLAST of CmoCh14G010920 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 9.0e-27
Identity = 58/125 (46.40%), Postives = 80/125 (64.00%), Query Frame = 1 

Query: 817 HLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGH--VVSSKGITVDPAKIEAVMRWPQPTT 876
           HL  VL I    Q YA   KC F   ++A+LGH  ++S +G++ DPAK+EA++ WP+P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 877 VTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPV 936
            TE+R FLGL GYYRRFV+++ KI   LT+L KK     WT +   +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 937 LTVPD 940
           L +PD
Sbjct: 123 LALPD 126

[Close]
BLAST of CmoCh14G010920 vs. NCBI nr
Match: gi|28558781|gb|AAO45752.1| (pol protein [Cucumis melo subsp. melo])

HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 670/921 (72.75%), Postives = 792/921 (85.99%), Query Frame = 1 

Query: 656  MAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNK 715
            MAPAEL+ELK QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+CIDYRELNKVT+ N+
Sbjct: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 716  YPLPRIDDLFDQLQGATVFSNIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLT 775
            YPLPRIDDLFDQLQGATVFS IDLRSGYHQLR+++ D+PKTAFRSRYGHY+F+VMSF LT
Sbjct: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 776  NAPAVFMELMNRVFKEFLDTFVLVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFS 835
            NAPAVFM+LMNRVF+EFLDTFV+VFIDDIL+YSK+EA+HE HLR VL  LR  +LYAKFS
Sbjct: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 836  KCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDF 895
            KCEFWL +V+FLGHVVS  G++VDPAKIEAV  W +P+TV+EVRSFLGLAGYYRRFV++F
Sbjct: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 896  SKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGL 955
            S+I++ LTQLT+KG PF W+  CE SFQ LK++LVTAPVLTVPDGSGN V+YSDAS KGL
Sbjct: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 956  GCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYKSL 1015
            GCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYGEK+Q+FTD+KSL
Sbjct: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 1016 KYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKLQD 1075
            KY FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRK  H++ +IT Q  L  
Sbjct: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420

Query: 1076 EMKRAGIDVMIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISS 1135
            +++RA I V++    +Q+AQLT+QPTLR+++IDAQ +D +L +     E  +   +S+SS
Sbjct: 421  DLERAEIAVLVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480

Query: 1136 NGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKR-FYWWSGMKRDIAD 1195
            +GGLL++ RLCVP D  +  ++++EAH + +  HPGST+     +  F     MKR++A+
Sbjct: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAE 540

Query: 1196 FVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRL 1255
            FVS+CL CQQVKAPRQ+PAGLLQPLS+P+WKWE V MDFI+GLP+T +GF V+WV+VDRL
Sbjct: 541  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRL 600

Query: 1256 TKTAHFIPGKSTYRVDRWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQL 1315
            TK+AHF+PGKSTY   +WAQLY+ EIVRLH VPVSIVSDRD RFTS+FW+ LQ A+GT+L
Sbjct: 601  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL 660

Query: 1316 RFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPF 1375
             FSTAFHPQTDGQTERLNQVLEDMLRAC+L+F G WD HL LMEFAYNNSYQATI MAPF
Sbjct: 661  DFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPF 720

Query: 1376 EALYGRRCRTPVFWEEVGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDL 1435
            EALYGR CR+PV W EVG Q+LMGPELVQ TN  +QKI+ R+ TAQSRQKSYADVRR+DL
Sbjct: 721  EALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 780

Query: 1436 KFEVGDHVFLKVAPMRGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNV 1495
            +FEVGD VFLKVAPM+GVLRF ++GKLSPRF+GPFEIL+R+G VAYR+ALPP+L+ VH+V
Sbjct: 781  EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDV 840

Query: 1496 FHVSMLRKYTPDPTHVIEHGMLPLREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGNR 1555
            FHVSMLRKY PDP+HV+++  L + E+LSY EQP  +LAR  + LRNK IPLVKV W N 
Sbjct: 841  FHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVKVLWRNH 900

Query: 1556 REEEATWEREEDVRKAYPELF 1576
            R EEATWERE+D+R  YPELF
Sbjct: 901  RVEEATWEREDDMRSRYPELF 921

[Close]
BLAST of CmoCh14G010920 vs. NCBI nr
Match: gi|590649404|ref|XP_007032400.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao])

HSP 1 Score: 1399.4 bits (3621), Expect = 0.0e+00
Identity = 686/1162 (59.04%), Postives = 864/1162 (74.35%), Query Frame = 1 

Query: 416  PAVQHQRGQAGQHQQGRAVAH--ATTARQADQPDAVVTGTLPVFGHLALVLFDSGSTHSF 475
            P+  H   Q   H  GR  A   A T ++A   +AVV+G L V    A VLFD G+THSF
Sbjct: 312  PSQLHLLRQLLSHLAGRGQARVFALTQQEAQTSNAVVSGILSVCNMNARVLFDPGATHSF 371

Query: 476  VSEEFVELAQLEKELLEITLSVSTPAHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDF 535
            +S  F       +   E  L VSTP  E+ +A    +   V +  +     L+VL   DF
Sbjct: 372  ISTCFASRLGRGRVRREEQLVVSTPLKEIFVAEWEYESCVVRVKDKDTSVNLVVLDTLDF 431

Query: 536  DVILGMDWLGGNRVLIDCETRIVTLRLPSGDIFTYKGATSKGVPSVITSLRAKKLIRSGA 595
            DVILGM+WL      +DC  ++V    P    F+ +G  S    ++I+ + A++L+R G 
Sbjct: 432  DVILGMNWLSPCHASVDCYHKLVRFDFPGEPSFSIQGDRSNAPTNLISVISARRLLRQGC 491

Query: 596  IAFLASVTLDNSNKQKTSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTMPISKAP 655
            I +LA V    +     + V +V+EFVDVFPE+LP LPP REV+F IDL P T PIS  P
Sbjct: 492  IGYLAVVKDSQAKIGDVTQVSVVKEFVDVFPEELPSLPPEREVEFCIDLIPDTRPISIPP 551

Query: 656  YRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIM 715
            YRMAPAEL+ELK+QL++LLDKGFIRPSVSPWGAPVLFVKKKDGS+R+CIDYR+LNKVT+ 
Sbjct: 552  YRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRQLNKVTVK 611

Query: 716  NKYPLPRIDDLFDQLQGATVFSNIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFS 775
            NKYPLPRIDDLFDQLQGA  FS IDLRSGYHQLR+R  DIPKTAFR+RYGHYEFLVMSF 
Sbjct: 612  NKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFG 671

Query: 776  LTNAPAVFMELMNRVFKEFLDTFVLVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAK 835
            LTNAPA FM+LMNRVFK +LD FV+VFIDDIL+YSKS  +HE HL+ VL ILR  +LYAK
Sbjct: 672  LTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLKIVLQILREHRLYAK 731

Query: 836  FSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQ 895
            FSKCEFWL  VAFLGHVVS +GI VD  KIEAV +WP+PT+V+E+RSF+GLAGYYRRFV+
Sbjct: 732  FSKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVSEIRSFVGLAGYYRRFVK 791

Query: 896  DFSKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGK 955
            DFSKI + LT+LT+K   F W+  CE SF++LK  L TAPVL++P G+G   ++ DASG 
Sbjct: 792  DFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTMFCDASGV 851

Query: 956  GLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYK 1015
            GLGCVLMQ GKVIAYASRQLK +E+NYP HDLE+AA+VFALK WRHYLYGE  +++TD+K
Sbjct: 852  GLGCVLMQHGKVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHK 911

Query: 1016 SLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMITTQEKL 1075
            SLKY+F Q++LN+RQ RW+EL+KDYD  ILYHPGKANVVADALSRK++ +   I+     
Sbjct: 912  SLKYIFQQRDLNLRQCRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHIS----- 971

Query: 1076 QDEMKRAGIDVMIKGGNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSI 1135
                                    ++P L  K+ +AQ  DE + K     +  +   ++ 
Sbjct: 972  -----------------------IVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTK 1031

Query: 1136 SSNGGLLWQNRLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIA 1195
             ++G L +  RL VP  +G+ ++I+ EAH  +YV HPG+TKMYQDLK  YWW G+KRD+A
Sbjct: 1032 GTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVA 1091

Query: 1196 DFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDR 1255
            +FVS+CL CQQVKA  Q+PAGLLQPL VP+WKWE + MDF++GLP+T  G++ +W++VDR
Sbjct: 1092 EFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDR 1151

Query: 1256 LTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQ 1315
            LTK+AHF+P K+TY   ++A++Y+ EIVRLH +P+SIVSDR  +FTS+FW  LQ+ALGT+
Sbjct: 1152 LTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALGTK 1211

Query: 1316 LRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAP 1375
            L FSTAFHPQTDGQ+ER  Q LE MLRAC +D    W+++LPL+EFAYNNS+Q +IQMAP
Sbjct: 1212 LDFSTAFHPQTDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAP 1271

Query: 1376 FEALYGRRCRTPVFWEEVGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRD 1435
            FEALYGRRCR+P+ W EVG ++L+GPELVQ     +  I+QR+LTAQSRQKSYAD RRRD
Sbjct: 1272 FEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRD 1331

Query: 1436 LKFEVGDHVFLKVAPMRGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHN 1495
            L+F+VGDHVFLKV+P +GV+RFGKKGKLSPR+IGPFEIL++VGAVAYR+ALPP+L+ +H 
Sbjct: 1332 LEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIHP 1391

Query: 1496 VFHVSMLRKYTPDPTHVIEHGMLPLREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGN 1555
            VFHVSMLRKY PDP+HVI +  + L++DL+YEEQP  IL R  ++LR+KD+  VKV W N
Sbjct: 1392 VFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVLWRN 1445

Query: 1556 RREEEATWEREEDVRKAYPELF 1576
               EE TWE E+++R  +P LF
Sbjct: 1452 HTSEEVTWEAEDEMRTKHPHLF 1445

[Close]
BLAST of CmoCh14G010920 vs. NCBI nr
Match: gi|47824950|gb|AAT38724.1| (Putative retrotransposon protein, identical [Solanum demissum])

HSP 1 Score: 1399.4 bits (3621), Expect = 0.0e+00
Identity = 748/1453 (51.48%), Postives = 968/1453 (66.62%), Query Frame = 1 

Query: 179  DSGTMTVESRYLRDFQRHKPPSFDEGKMDLIAAENWLEAIETAF--HFMNCPPNLKTHTS 238
            D+  + + +  L+D  R     +  G+++   + +W    E AF  HF   P  LK    
Sbjct: 166  DTERVELAAYQLKDVARTWLDQWKGGRVENAPSASWAN-FEEAFLGHFF--PRELKE--- 225

Query: 239  TNTTQITARVKMQAAFLALKQGDRSVGDYDLEFNRLARFSPAYVSSEELKGERFIAGLRE 298
                   A+V+    FL LKQ   SV +Y L+F +L+R++P  V+    +   F+AGL  
Sbjct: 226  -------AKVR---EFLTLKQEPLSVREYSLKFTQLSRYAPEMVADMRNRMSLFVAGLSR 285

Query: 299  ---------ELRGNVASQSSFVYTKALQVATLLDSP--RTDKLQLGIAQSSHTAAQGKGA 358
                      L G++      VY + ++   L D    R+ + + G           + +
Sbjct: 286  LSSKEGRAAMLIGDMDISRLMVYVQQVEEEKLRDREEFRSKRAKTGNEPGQQKGNANRPS 345

Query: 359  YPSHPRTGRP-------PRGRTDRRGR-------APVRN-------MTLCPNCR---RPH 418
            +    +   P       PR R    G+        PV++        +L P C    R H
Sbjct: 346  FQERQKGPAPSSVSAPAPRYRGGHNGQNSKDFKARPVQSSGSVAQRSSLFPACARCGRTH 405

Query: 419  TGECRAGTGACYRCGQVGHFAVDCPQRNDQRVNL-----------PAVQHQRGQAGQHQQ 478
             G+CR G   C++CGQ GHF  +CP+ N    +L           P     RG       
Sbjct: 406  PGKCRDGQTGCFKCGQEGHFVKECPKNNQGSGSLGSRTQSSSVAPPDRMTPRGATSSTGG 465

Query: 479  GRAVAHATTAR--QADQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKEL 538
            G    +A T+R  Q + P+ VVT  + VF      L D G++ SFV+        +  E 
Sbjct: 466  GANRLYAITSRHEQENSPN-VVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPER 525

Query: 539  LEITLSVSTPAHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDFDVILGMDWLGGNRVL 598
            L     VSTP  E +LA    +   V+I  +     LI L M DFDVILGMDWL      
Sbjct: 526  LCEPFCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMVDFDVILGMDWLHACYAS 585

Query: 599  IDCETRIVTLRLPSGDIFTYKGATSKGVPSVITSLRAKKLIRSGAIAFLASVTLDNSNKQ 658
            IDC TR+V  + PS  I  +  +++      I+ L+A+KL+  G I  LA V   +    
Sbjct: 586  IDCRTRVVKFQFPSEPILEWSSSSAVPKGRFISYLKARKLVSKGCIYHLARVNDSSVEIP 645

Query: 659  KTSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQL 718
               SV IVREF +VFP+DLPG+PP RE+DFGIDL P T PIS  PYRMAPAEL+ELK   
Sbjct: 646  YFQSVPIVREFPEVFPDDLPGIPPEREIDFGIDLIPDTRPISIPPYRMAPAELKELK--- 705

Query: 719  QELLDKGFIRPSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQL 778
             +LL+KGFIRPSVSPWGAPVLFV+KKDGS+R+CIDYR+LNKVTI NKYPLPRIDDLFDQL
Sbjct: 706  -DLLEKGFIRPSVSPWGAPVLFVRKKDGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQL 765

Query: 779  QGATVFSNIDLRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRV 838
            QGAT FS IDLRSGYHQLRVRE DIPKTAFR+RYGHYEFLVMSF LTNAPA FM+LMNRV
Sbjct: 766  QGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRV 825

Query: 839  FKEFLDTFVLVFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLG 898
            F+ +LD FV++FIDDIL+YS++E DH  HLR VL  L+ ++LYAKFSKCEFWL  VAFLG
Sbjct: 826  FRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLG 885

Query: 899  HVVSSKGITVDPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKK 958
            H+VS  GI VD  KIEAV  WP+PT+ TE+RSFLGLAGYYRRFV+ FS I+S LT+LT+K
Sbjct: 886  HIVSGDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLTKLTQK 945

Query: 959  GKPFAWTPVCEQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAY 1018
               F W+  CE+SFQELKKRL+TAPVLT+P+G+  LVVY DAS  GLGCVLMQ GKVIAY
Sbjct: 946  TGKFQWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYCDASRIGLGCVLMQNGKVIAY 1005

Query: 1019 ASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYKSLKYLFTQKELNMRQ 1078
            ASRQLK +E+NYPTHDLELA VVFALK WRHYLYG  V +FTD+KSL+Y+ TQK LN+RQ
Sbjct: 1006 ASRQLKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKALNLRQ 1065

Query: 1079 RRWLELVKDYDIEILYHPGKANVVADALSRKAVHTSVMIT--TQEKLQDEMKRAGIDVMI 1138
            RRWLEL+KDYD+ ILYHPGKANVVAD+LSR ++ ++  I    +E  +D  + A + V  
Sbjct: 1066 RRWLELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRF 1125

Query: 1139 KG---GNVQIAQLTIQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLLWQN 1198
                 G + +     + +L  +V + Q  D  L ++ + ++ +R + +    +G L +Q 
Sbjct: 1126 TDSTEGGIAVTS-KAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVLRYQG 1185

Query: 1199 RLCVPRDEGILKDIMTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQ 1258
            RLCVP  +G+ + +M EAH + Y  HPGSTKMY+DL+ FYWW+GMK+ IA+FV++C  CQ
Sbjct: 1186 RLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCPNCQ 1245

Query: 1259 QVKAPRQRPAGLLQPLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPG 1318
            QVK   QRP GL Q + +P+WKWE + MDFI+GLP++++  + +WVIVDR+TK+AHF+P 
Sbjct: 1246 QVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHFLPV 1305

Query: 1319 KSTYRVDRWAQLYIKEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQ 1378
            K+T+  + +A+LYI+EIVRLH VP+SI+SDR  +FT+QFW+S QK LG+++  STAFHPQ
Sbjct: 1306 KTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQ 1365

Query: 1379 TDGQTERLNQVLEDMLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCR 1438
            TDGQ ER  Q LEDMLRAC +DF   WD+HLPL+EFAYNNSY ++IQMAP+EALYGRRCR
Sbjct: 1366 TDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCR 1425

Query: 1439 TPVFWEEVGTQQLMGPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDLKFEVGDHVF 1498
            +P+ W EVG  +L+GP+LV      V+ I++R+ TAQSRQKSY DVRRR L+FEV D V+
Sbjct: 1426 SPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDDWVY 1485

Query: 1499 LKVAPMRGVLRFGKKGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHVSMLRKY 1558
            LKV+PM+GV+RFGKKGKLSPR+IGP+ I+ RVG+VAY + LP  LAAVH VFH+SML+K 
Sbjct: 1486 LKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHPVFHISMLKKC 1545

Query: 1559 TPDPTHVIEHGMLPLREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGNRREEEATWER 1577
              DP+ ++    + ++++LSYEE P +IL R  RRLR KD+  VKV W N+  EEATWE 
Sbjct: 1546 IGDPSLILPTESVKIKDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRNQFVEEATWEA 1596

[Close]
BLAST of CmoCh14G010920 vs. NCBI nr
Match: gi|121501699|gb|ABM55240.1| (retrotransposon protein [Beta vulgaris])

HSP 1 Score: 1380.9 bits (3573), Expect = 0.0e+00
Identity = 706/1371 (51.50%), Postives = 927/1371 (67.61%), Query Frame = 1 

Query: 252  FLALKQGDRSVGDYDLEFNRLARFSPAYVSSEELKGERFIAGLREELR----GNVASQSS 311
            F+ L+ G  ++ +Y  +F  L+RF+P  V++EELK +RF  GL +E++    G   +   
Sbjct: 129  FINLRMGSMTISEYYSKFIALSRFAPEVVATEELKAQRFEQGLTDEIQLGLGGETFTSLD 188

Query: 312  FVYTKALQVATLLDSPRTDKLQLGIAQSSHTAAQGKGAYPSHPRTGR---PPRGRTDRRG 371
             VY +A  +  L  S R  K  +   +    +  G        R G      R   D R 
Sbjct: 189  VVYGRASHIYGL-QSRRDKKAGIVGEKRKEVSTGGNQNNFKKNRNGNGNFQGRNNQDNRS 248

Query: 372  RAPVRNMTLCPNCRRPHTG-ECRAGTGACYRCGQVGHFAVDCPQR-----------NDQR 431
            +     + +C  C + H G +C+     C+ C + GH   +C  +           N  R
Sbjct: 249  QGRPERVHICKFCDKNHPGKDCKGELVTCHYCQKKGHREYECYTKHGKGLKIQGNGNQAR 308

Query: 432  VNLPAVQHQR----GQAGQHQQGRAVAHATTAR-------------QADQPDAVVTGTLP 491
                 + +Q     GQ  Q    R  A+  +A+             +A++   VVTG   
Sbjct: 309  PGSNQIGNQGPKPGGQNNQGNHSRPAANDNSAQNKPAGKVFVMSHNEAERSADVVTGNFS 368

Query: 492  VFGHLALVLFDSGSTHSFVSEEFVE-LAQLEKELLEITLSVSTPAHELLLATHRVKGGGV 551
            +       LFDSG+T+SF+S   ++ L  +E E   I LSVS P  E++  T   K   +
Sbjct: 369  INSVFVKTLFDSGATYSFISPSVLKSLGLVEHE--SIDLSVSIPTGEVVKCTKLFKNLPL 428

Query: 552  TIAGRVIEATLIVLRMQDFDVILGMDWLGGNRVLIDCETRIVTLRLPSGDIFTYKGATSK 611
             I G V  + LI   + D DVILGM+WL   +  IDCE + V LR PSG   +Y+     
Sbjct: 429  KIGGSVFPSELIEFNLGDLDVILGMNWLSLYKARIDCEVQKVVLRNPSGKFTSYRRFGKP 488

Query: 612  GVPSVITSLRAKKLIRSGAIAFLASVT-LDNSNKQKTSSVHIVREFVDVFPEDLPGLPPA 671
                VI++L+ +KL+R G   F  SV  +    + K   V IV EF+DVFP ++ G+PPA
Sbjct: 489  KNFGVISALQVQKLMRKGCELFFCSVQDVSKEAELKLEDVSIVNEFMDVFPSEISGMPPA 548

Query: 672  REVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIRPSVSPWGAPVLFVKK 731
            R V+F IDL PGT PISKAPYRMAP E+ ELK QLQELLDKG+IRPS SPWGAPVLFVKK
Sbjct: 549  RAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQLQELLDKGYIRPSASPWGAPVLFVKK 608

Query: 732  KDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNIDLRSGYHQLRVREGDI 791
            KDGSMR+CIDYRELN VTI NKYPLPRIDDLFDQL GA+VFS IDLRSGYHQLRV + D+
Sbjct: 609  KDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLNGASVFSKIDLRSGYHQLRVADKDV 668

Query: 792  PKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVLVFIDDILVYSKSEAD 851
            PKTAFR+RYGHYEF VM F LTNAPA+FM+LMNR+F EFLD FV+VFIDDIL+YS++E +
Sbjct: 669  PKTAFRTRYGHYEFTVMPFGLTNAPAIFMDLMNRIFHEFLDKFVVVFIDDILIYSRNETE 728

Query: 852  HEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITVDPAKIEAVMRWPQPT 911
            H+ HLR +L  LR  QLYAKFSKCEF L +VAFLGH VS +G++VDPAKI+AV  WP P 
Sbjct: 729  HDEHLRIILETLRKNQLYAKFSKCEFRLEKVAFLGHFVSKEGVSVDPAKIQAVSEWPTPK 788

Query: 912  TVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVCEQSFQELKKRLVTAP 971
            +VT++RSFLGLAGYYRRFV+DFSKI+  +T L KK   F W   CE++FQ LK RL TAP
Sbjct: 789  SVTDIRSFLGLAGYYRRFVRDFSKIARPMTNLMKKETKFEWNEKCEEAFQILKDRLTTAP 848

Query: 972  VLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFA 1031
            VLT+PDG+    VYSDAS  GLGCVL Q GKVIAYAS QLK YE NYPTHDLELAA+VFA
Sbjct: 849  VLTLPDGNEGFEVYSDASKNGLGCVLQQNGKVIAYASCQLKPYEANYPTHDLELAAIVFA 908

Query: 1032 LKTWRHYLYGEKVQVFTDYKSLKYLFTQKELNMRQRRWLELVKDYDIEILYHPGKANVVA 1091
            LK WRHYLYG   ++FTD+KSLKY+FTQK+LNMRQRRWLEL+KDYD++I YH GKANVVA
Sbjct: 909  LKIWRHYLYGATCKIFTDHKSLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVA 968

Query: 1092 DALSRKAVHTSVMITTQEKLQDEMKRAGIDVMIKG-GNVQIAQLTIQPTLRKKVIDAQRS 1151
            DALSRK+ H+   +   E+L  +MKR  ++++  G    +++ L++  ++  ++I+ Q  
Sbjct: 969  DALSRKSSHSLSTLIVPEELCRDMKRLNLEILNPGESEARLSNLSLGVSIFDEIIEGQVG 1028

Query: 1152 DEHLSKVWSQIETERPVGYSISSNGGLLWQNRLCVPRDEGILK-DIMTEAHDTSYVFHPG 1211
            DEHL K+  +++  + + + I  +G L ++ R CVP+    LK  +M E H+T Y  HPG
Sbjct: 1029 DEHLDKIKEKMKQGKEIDFKIHEDGSLRFKGRWCVPQKCNDLKRRLMDEGHNTPYSVHPG 1088

Query: 1212 STKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQPLSVPQWKWEAVCM 1271
              K+Y+DLK  YWW  MKR++A++VS+CLTCQ+VK   +RP G +QPL VP WKW+++ M
Sbjct: 1089 GDKLYKDLKVIYWWPNMKREVAEYVSKCLTCQKVKIDHKRPMGTVQPLEVPGWKWDSISM 1148

Query: 1272 DFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVDRWAQLYIKEIVRLHEVPVSIV 1331
            DF++ LPK++ G + +WVIVDRLTK+A FIP K T++  + A  YIK +VRLH VP  I+
Sbjct: 1149 DFVTALPKSRSGNDTIWVIVDRLTKSAVFIPIKETWKKKQLATTYIKHVVRLHGVPKDII 1208

Query: 1332 SDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTERLNQVLEDMLRACSLDFAGCWD 1391
            SDRD+RF S+FW+ +Q  LGT L+ STAFHP TDGQTER NQ +EDMLRAC++DF G W+
Sbjct: 1209 SDRDSRFLSKFWKKVQANLGTTLKMSTAFHPATDGQTERTNQTMEDMLRACAIDFQGSWE 1268

Query: 1392 EHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLMGPELVQVTNAVVQK 1451
            + L L+EF+YNNSY A+I+MAPFEALYGR+CR+P+ W +     ++G E ++ T   V+ 
Sbjct: 1269 DQLDLIEFSYNNSYHASIKMAPFEALYGRKCRSPICWNDYSENVVLGTEFIEETVKNVRL 1328

Query: 1452 IKQRILTAQSRQKSYADVRRRDLKFEVGDHVFLKVAPMRGVLRFGKKGKLSPRFIGPFEI 1511
            I+ RI  AQ RQKSYAD++RR+ +F VGD VFLKV+P +GV+RFGKKGKLS +++GP+EI
Sbjct: 1329 IQARIQAAQDRQKSYADLKRREDEFAVGDKVFLKVSPTKGVMRFGKKGKLSAKYVGPYEI 1388

Query: 1512 LDRVGAVAYRIALPPNLAAVHNVFHVSMLRKYTPDPTHVIEHGMLPLREDLSYEEQPSRI 1571
            L+R+G VAYR+ALP     +H+VFH+S L++Y PD  HV+E   + +   L+YEE+P +I
Sbjct: 1389 LERIGKVAYRLALPMEFEKMHDVFHISQLKRYIPDERHVLEPERVQIDSSLTYEERPVKI 1448

Query: 1572 LARDTRRLRNKDIPLVKVSWGNRREEEATWEREEDVRKAYPELFQGIATFG 1583
            L R  R  RNKD+ +VKV W N   EEATWE EED++K YP+LF  ++  G
Sbjct: 1449 LDRKVRSTRNKDVHIVKVLWSNHESEEATWEAEEDMKKKYPDLFLEVSYEG 1496

[Close]
BLAST of CmoCh14G010920 vs. NCBI nr
Match: gi|595793033|ref|XP_007200265.1| (hypothetical protein PRUPE_ppa015000mg [Prunus persica])

HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 720/1378 (52.25%), Postives = 944/1378 (68.51%), Query Frame = 1 

Query: 210  AAENWLEAIETAFHFMNCPPNLKTHTSTNTTQITARVKMQAAFLALKQGDRSVGDYDLEF 269
            AA NW E  +  F     PP+              R   ++ FL LKQG  SV +Y+ +F
Sbjct: 142  AAINW-EEFQRVFSEQFYPPSY-------------RHAKKSEFLYLKQGSMSVMEYEHKF 201

Query: 270  NRLARFSPAYVSSEELKGERFIAGLREELRGNVASQSSFVYTKALQVATLLDSPRTDKLQ 329
            N L+RF+P  V++EE +  RF  GL  E++  V + +++   +AL  A    S    KL 
Sbjct: 202  NELSRFAPELVATEEDRCRRFEEGLWWEIQA-VITANTYPNMRALAHAVERVSR---KLG 261

Query: 330  LGIAQSSHTAAQGKGAYPSHPRTGRPPRGRTDRRGRAPVRNMTLCPNCRRPHTGECRAGT 389
              + +               P  G P +G + R G +           R   +   R+G+
Sbjct: 262  GNVGRRRRDT----------PGIGGPSQGPSKRGGSSSSSASGGWSEGRGSSSSSGRSGS 321

Query: 390  GACYR--CGQVGHFAVD--CPQRNDQRVNLPAVQHQRGQAGQHQQGRAVAHATTAR---- 449
               +    G     A+    P       +  A    RG++G+  +G+     T AR    
Sbjct: 322  RPAWTQYSGHSLQLALPGLLPGTLAGSSSSKAPSSSRGRSGRQSRGQPGRSTTQARVFSM 381

Query: 450  ---QADQPDAVVTGTLPVFGHLALVLFDSGSTHSFVSEEFVELAQLEKELLEITLSVSTP 509
               +A     V+TG +P+FG+LA VL D G+THSFV+  F+    +    +  + S+S P
Sbjct: 382  TQQEAYATPDVITGMIPIFGYLARVLIDPGATHSFVAHNFIPYISIRPTPITGSFSISLP 441

Query: 510  AHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDFDVILGMDWLGGNRVLIDCETRIVTL 569
              E+L A    +   V +    +EA LI L + D D+ILGMDWL  +   +DC  + VTL
Sbjct: 442  TGEVLYADRVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLEKHHASVDCFRKEVTL 501

Query: 570  RLPSGDIFTYKGATSKGVPSVITSLRAKKLIRSGAIAFLASVTLDNSNKQKTSSVHIVRE 629
            R P     T++G        +I+++ AKKL++ G   +LA +            + +V E
Sbjct: 502  RSPGQPKVTFRGERRVLPTCLISAITAKKLLKKGYEGYLAHIIDTREITLNLEDIPVVCE 561

Query: 630  FVDVFPEDLPGLPPAREVDFGIDLEPGTMPISKAPYRMAPAELRELKEQLQELLDKGFIR 689
            F ++FP+DLPGLPP RE++F ID  PGT PI + PYRMAPAELRELK QLQEL+D  FIR
Sbjct: 562  FPNIFPDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIR 621

Query: 690  PSVSPWGAPVLFVKKKDGSMRMCIDYRELNKVTIMNKYPLPRIDDLFDQLQGATVFSNID 749
            PSVSPWGAPVLFV+K+DG+MR+CIDYR+LNKVTI N+YPLPRIDDLFDQL+GA  FS ID
Sbjct: 622  PSVSPWGAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRIDDLFDQLKGAKYFSKID 681

Query: 750  LRSGYHQLRVREGDIPKTAFRSRYGHYEFLVMSFSLTNAPAVFMELMNRVFKEFLDTFVL 809
            LRSGYHQLR+RE DIP TA R+RYGHYEFLVM F LTNAPA FM+LMNRVF+ +LD FV+
Sbjct: 682  LRSGYHQLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRPYLDHFVI 741

Query: 810  VFIDDILVYSKSEADHEIHLRKVLTILRAQQLYAKFSKCEFWLSEVAFLGHVVSSKGITV 869
            VFIDDILVYS++   H+ HLR VL  LR +QLYAKFSKC+FWL  V FLGHV+S++GI V
Sbjct: 742  VFIDDILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHVISAEGIYV 801

Query: 870  DPAKIEAVMRWPQPTTVTEVRSFLGLAGYYRRFVQDFSKISSALTQLTKKGKPFAWTPVC 929
            DP K+EA++ W Q T+VTE+RSFLGLAGYYRRFV+ FS I++ LT+LT+K   F WT  C
Sbjct: 802  DPQKVEAIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEEC 861

Query: 930  EQSFQELKKRLVTAPVLTVPDGSGNLVVYSDASGKGLGCVLMQKGKVIAYASRQLKEYER 989
            EQSFQELKKRL TAPVL +PD +GN V+YSDAS +GLGCVLMQ  +VIAYASRQLK++E+
Sbjct: 862  EQSFQELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKKHEQ 921

Query: 990  NYPTHDLELAAVVFALKTWRHYLYGEKVQVFTDYKSLKYLFTQKELNMRQRRWLELVKDY 1049
            NYP HDLELAAVVFALK WRHYLYGE  Q+FTD+KSLKY FTQ+ELNMRQRRWLEL+KDY
Sbjct: 922  NYPVHDLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDY 981

Query: 1050 DIEILYHPGKANVVADALSRKAVHTSVMI-TTQEKLQDEMKRAGIDVMIKGGNVQIAQLT 1109
            D  I Y+PG+ANVVADALSRK   +   + TT   L  E+++ G+++ +      +A L 
Sbjct: 982  DCTIEYYPGRANVVADALSRKTTGSLTHLRTTYLPLLVELRKDGVELEMTQQGGILASLH 1041

Query: 1110 IQPTLRKKVIDAQRSDEHLSKVWSQIETERPVGYSISSNGGLLWQNRLCVPRDEGILKDI 1169
            ++P L +++I AQ  D  L ++  ++E+     Y+I  +G L+   RL VP+++ + ++I
Sbjct: 1042 VRPILVERIIVAQLGDPTLCRIRGEVESGSRKDYAIRGDGALVTGTRLHVPKNDYLKREI 1101

Query: 1170 MTEAHDTSYVFHPGSTKMYQDLKRFYWWSGMKRDIADFVSRCLTCQQVKAPRQRPAGLLQ 1229
            + EAH ++Y  HPGSTKMY+ L+ +Y W  MK DIA +VSRCL CQQVKA RQ+P+GL+Q
Sbjct: 1102 LEEAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSRCLICQQVKAERQKPSGLMQ 1161

Query: 1230 PLSVPQWKWEAVCMDFISGLPKTKQGFNVVWVIVDRLTKTAHFIPGKSTYRVDRWAQLYI 1289
            PL +P+WKWE + MDF+  LP+T +G + +WVIVDRLTK+ HF+P K TY + + A+L++
Sbjct: 1162 PLPIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKSTHFLPIKETYSLTKLAKLFV 1221

Query: 1290 KEIVRLHEVPVSIVSDRDTRFTSQFWRSLQKALGTQLRFSTAFHPQTDGQTERLNQVLED 1349
             EIVRLH  PVSIVSDRD RFTS+FW+ LQ+A+GT+L+FSTAFHPQTDGQ+ER  Q LED
Sbjct: 1222 DEIVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFSTAFHPQTDGQSERTIQTLED 1281

Query: 1350 MLRACSLDFAGCWDEHLPLMEFAYNNSYQATIQMAPFEALYGRRCRTPVFWEEVGTQQLM 1409
            MLR+C L     WD HL L+EFAYNNSY A+I+MAP+EALYGR+CRTP+ W EVG ++L 
Sbjct: 1282 MLRSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALYGRQCRTPICWNEVGDKKLE 1341

Query: 1410 GPELVQVTNAVVQKIKQRILTAQSRQKSYADVRRRDLKFEVGDHVFLKVAPMRGVLRFGK 1469
              + +Q T   V+ IK+++  AQ RQKSYAD R +DL+F VGD VFLK++P +GV+RFGK
Sbjct: 1342 KVDSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDWVFLKLSPWKGVMRFGK 1401

Query: 1470 KGKLSPRFIGPFEILDRVGAVAYRIALPPNLAAVHNVFHVSMLRKYTPDPTHVIEHGMLP 1529
            +GKLSPR+IGP+EI +R+G VAYR+ALP  L+ VH+VFHVSMLRKY  DP+H++E+  + 
Sbjct: 1402 RGKLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLRKYMSDPSHILEYQPVE 1461

Query: 1530 LREDLSYEEQPSRILARDTRRLRNKDIPLVKVSWGNRREEEATWEREEDVRKAYPELF 1576
            + EDLSYEEQP +IL R  + LR++ IP+VKV W ++  EEATWE E  +R  YP LF
Sbjct: 1462 VEEDLSYEEQPVQILDRKEQMLRSRFIPVVKVLWRSQTVEEATWEPEAQMRVKYPYLF 1491

The following BLAST results are available for this feature:
BLAST of CmoCh14G010920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TF25_SCHPO6.5e-14432.25Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF24_SCHPO6.5e-14432.25Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF23_SCHPO6.5e-14432.25Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF212_SCHPO6.5e-14432.25Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF21_SCHPO6.5e-14432.25Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of CmoCh14G010920 vs. TrEMBL
Match NameE-valueIdentityDescription
Q84KB0_CUCME0.0e+0072.75Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A061EEG7_THECC0.0e+0059.04DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_018243 PE=4 SV... [more]
Q6L3S2_SOLDE0.0e+0051.48Putative retrotransposon protein, identical OS=Solanum demissum GN=SDM1_41t00017... [more]
A2I5E5_BETVU0.0e+0051.50Retrotransposon protein OS=Beta vulgaris PE=4 SV=1[more]
M5VK25_PRUPE0.0e+0052.25Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1[more]
BLAST of CmoCh14G010920 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00860.19.0e-2746.40ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CmoCh14G010920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|28558781|gb|AAO45752.1|0.0e+0072.75pol protein [Cucumis melo subsp. melo][more]
gi|590649404|ref|XP_007032400.1|0.0e+0059.04DNA/RNA polymerases superfamily protein [Theobroma cacao][more]
gi|47824950|gb|AAT38724.1|0.0e+0051.48Putative retrotransposon protein, identical [Solanum demissum][more]
gi|121501699|gb|ABM55240.1|0.0e+0051.50retrotransposon protein [Beta vulgaris][more]
gi|595793033|ref|XP_007200265.1|0.0e+0052.25hypothetical protein PRUPE_ppa015000mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR005162Retrotrans_gag_dom
IPR012337RNaseH-like_sf
IPR013242Retroviral aspartyl protease
IPR016197Chromo-like_dom_sf
IPR021109Peptidase_aspartic_dom_sf
IPR023780Chromo_domain
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G010920.1CmoCh14G010920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 691..850
score: 3.6
IPR000477Reverse transcriptase domainPROFILEPS50878RT_POLcoord: 672..851
score: 9
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 1227..1338
score: 1.5
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 1218..1381
score: 17
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 369..408
score: 1.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 391..407
score: 4.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 391..407
score: 8.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 392..407
score: 10
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 377..412
score: 2.
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 244..296
score: 1.
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 1226..1385
score: 2.4
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 1219..1379
score: 1.21
IPR013242Retroviral aspartyl proteasePFAMPF08284RVP_2coord: 434..561
score: 3.3
IPR016197Chromo domain-likeunknownSSF54160Chromo domain-likecoord: 1490..1573
score: 1.4
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 452..550
score: 1.7
IPR023780Chromo domainPFAMPF00385Chromocoord: 1527..1576
score: 3.
NoneNo IPR availableunknownCoilCoilcoord: 654..674
scor
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 640..781
score: 6.3
NoneNo IPR availableGENE3DG3DSA:3.30.70.270coord: 782..859
score: 1.
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 684..1575
score:
NoneNo IPR availablePANTHERPTHR24559:SF207SUBFAMILY NOT NAMEDcoord: 684..1575
score:
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 615..1044
score: 3.67E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G010920Watermelon (Charleston Gray)cmowcgB206
CmoCh14G010920Watermelon (97103) v1cmowmB213
CmoCh14G010920Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G010920Bottle gourd (USVL1VR-Ls)cmolsiB228
CmoCh14G010920Watermelon (97103) v2cmowmbB229
CmoCh14G010920Wax gourdcmowgoB0279