CmoCh14G010770 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G010770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NAD(P)H-quinone oxidoreductase subunit 1 (1.6.5.-)
Location	Cmo_Chr14 : 5996470 .. 5998360 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGACGTTGCTTTCTCCGAGTTTGATTCTTTGGAATTTTGGGACGCCGTAGTGTTGCTGAAATTGAAGGTTTTAGCACCACCTATCTTGTGAGTCTCTCTTTGTTTTTTTTTTTTAACAAATTTTCCACATTTTTTTTTTCAACAAATTTACTTTATTTTTTTTTTCTTTCAACAAATTTTCCTTATTTTTTTTTCTTTCAACAAATTTTCTTTATTTTTTTTGTTTCAACAATTTTTTTTTTGCTTTCGTTGGGTCCATCCTAGAGAGCCGTTATGTTCTCGGAGCTCGATTCTATGAAATTTTTGAACGCCGTAGTGTCGCTAAGATCGAAGGGTATGACACCACCGATCTTGTGAGCCTTTCTTTGTTTTTTTTTCTTCAAACAAATTTTCCAATTTTTTTTTTCTCCATCAAATTTTCTTTGTTTTCTTTTTTCTTTCAACAAATTTTCTTTTTTTTGTTAAGTCCATCCTAGAAAGATGTTGCGTTCTAGGAGCTTGATTCTGAGAAATTTTTGGACGTCGTATTGTCGCTAAGATCGAAGGGTATGGCATCACTGATCTTATGAATCTTTCCTTATTTTTTTTTTCTTCAAACAAATTTTCTAATTTTTTTCTCCAACAAATTTTCTTTTTTCTTTCAATAAATTTTCTTTGTTTTTTTTTTCTTTCAACAAATTTTCTTTGTTTTCCTTGGGTTGATCCTAGAAAGACGTTGGGTTGTAAGAACTTGATTCTGAGAAATTTTGGGATGTCATAGTGTCGCTGAGATCGAACGGTATGACACCACTAATCTTGAGCCTATCTTTGTTTTTTTTTTTCCTTCTAACAAATTTTCTTTGTCGTTTTTTTTTTCTTGCAATAATTTTTTTTTTGTTTTTTTTTTTCCTTTCAACTAATTTTCTTTGTGTTGGGAGCTTGATTCTGAGAAGTTTTGGGACGCCGTAGTTTCACTTAAATCGAACAGGCACCACCGATCTTTGAGCCTTTCTTTGTTTTTTTTTCTTTTAACAATTTTTCTTTGTGTTTTTTTTTCTCCAACAATTTTTCTTTGTTTTTTTTTTCTTGCAATAATATTTTTTGTTTTTTTTCTTCTTTCAACAATTTTTCTTTGTTTTTGTTGGGTCCATCCTAGAAAGAGTTGCGTTCTTCGAACTTGATTCTTTGAAATTTTGGGACGCCGTAGTGTCGCTAAAATTGAAGGGTATAGCACCACCGATCTTGTGAGTCTTTCTTTGTTTTTTTTATTTTTTATCTTTTAACAAATTTTTTTTGTTTTTTTTTCTTCCAACAGATTGTTTTTTCTCGGACAAATTTTCTTTGTTTTTTTCTTCCAATAATTTTTCCCAACAAATTTTCTTTATTTTTTTCTTCAAACAAATTTTTCAATTTTTTTTTCTCCAATAAATTTTTTCGTTGGGTCCATCCTAGAAAGATGTTGCTTTCTCCGAGCTTGATTCTACGAAATTTGGGACGCCATAGTGTCGCTGAGATCGAAGGGTATGGCACCACCGATCTTGTGAGGTTTTTTTTTTTTTCTTTCAACAAATTTTTTTAGTTTTTTTTTCTTTTAACAAATTTTCTGTGTTTTTTTTCTTTCAACAAATTTTCTTTGTTTTAGTTGGGTCCATCCTAGAAAGTATTTCTCCTCCGTCAACCAATTTTTAGAACAGTGATATTATTACAGATTATGATTCTCTAACAGTTTGAGTACAGTTGATATAGTTGAGGCTCAATCAAAATATGATTTTTGGAGGTGGAATTTGTGGCATCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAAAATGTAAGAGGTTACCTTTTGATTTACCAAAAGTGGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCA

mRNA sequence

AAAGACGTTGCTTTCTCCGAGTTTGATTCTTTGGAATTTTGGGACGCCGTAGTGTTGCTGAAATTGAAGAGAGCCGTTATGTTCTCGGAGCTCGATTCTATGAAATTTTTGAACGCCGTAGTGTCGCTAAGATCGAAGGGTATGACACCACCGATCTTTTTGAGTACAGTTGATATAGTTGAGGCTCAATCAAAATATGATTTTTGGAGGTGGAATTTGTGGCATCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAAAATGTAAGAGGTTACCTTTTGATTTACCAAAAGTGGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCA

Coding sequence (CDS)

AAAGACGTTGCTTTCTCCGAGTTTGATTCTTTGGAATTTTGGGACGCCGTAGTGTTGCTGAAATTGAAGAGAGCCGTTATGTTCTCGGAGCTCGATTCTATGAAATTTTTGAACGCCGTAGTGTCGCTAAGATCGAAGGGTATGACACCACCGATCTTTTTGAGTACAGTTGATATAGTTGAGGCTCAATCAAAATATGATTTTTGGAGGTGGAATTTGTGGCATCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAAAATGTAAGAGGTTACCTTTTGATTTACCAAAAGTGGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCA

Homology

[Close]

BLAST of CmoCh14G010770 vs. Swiss-Prot
Match: NU1C_AETGR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema grandiflorum GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

[Close]

BLAST of CmoCh14G010770 vs. Swiss-Prot
Match: NU1C_AETCO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema cordifolium GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

[Close]

BLAST of CmoCh14G010770 vs. Swiss-Prot
Match: NU1C_LEPVR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lepidium virginicum GN=ndhA PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.4e-26
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

[Close]

BLAST of CmoCh14G010770 vs. Swiss-Prot
Match: NU1C_NASOF (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nasturtium officinale GN=ndhA PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.4e-26
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

[Close]

BLAST of CmoCh14G010770 vs. Swiss-Prot
Match: NU1C_TOBAC (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nicotiana tabacum GN=ndhA PE=3 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 4.4e-26
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF++FLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 193 LSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEY 252

Query: 114 S 115
           S
Sbjct: 253 S 253

[Close]

BLAST of CmoCh14G010770 vs. TrEMBL
Match: A0A0S1RR53_9ASPA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Polygonatum cyrtonema GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGFV+FLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 191 LSTVDIVEAQSKYGFWGWNLWRQPIGFVVFLISSLAECERLPFDLPEAEEELVAGYQTEY 250

Query: 114 S 115
           S
Sbjct: 251 S 251

[Close]

BLAST of CmoCh14G010770 vs. TrEMBL
Match: A0A0S0ZGU9_9ASTE (NAD(P)H-quinone oxidoreductase subunit 1 (Fragment) OS=Cordia sebestena GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 185 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEY 244

Query: 114 S 115
           S
Sbjct: 245 S 245

[Close]

BLAST of CmoCh14G010770 vs. TrEMBL
Match: H2FC85_9ASPA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Scadoxus cinnabarinus GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGFV+FLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 191 LSTVDIVEAQSKYGFWGWNLWRQPIGFVVFLISSLAECERLPFDLPEAEEELVAGYQTEY 250

Query: 114 S 115
           S
Sbjct: 251 S 251

[Close]

BLAST of CmoCh14G010770 vs. TrEMBL
Match: H2FC77_9ASPA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Polianthes sp. Pires 2011-05 GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGFV+FLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 191 LSTVDIVEAQSKYGFWGWNLWRQPIGFVVFLISSLAECERLPFDLPEAEEELVAGYQTEY 250

Query: 114 S 115
           S
Sbjct: 251 S 251

[Close]

BLAST of CmoCh14G010770 vs. TrEMBL
Match: H2FCB1_MAIST (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Maianthemum stellatum GN=ndhA PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGFV+FLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 191 LSTVDIVEAQSKYGFWGWNLWRQPIGFVVFLISSLAECERLPFDLPEAEEELVAGYQTEY 250

Query: 114 S 115
           S
Sbjct: 251 S 251

[Close]

BLAST of CmoCh14G010770 vs. TAIR10
Match: ATCG01100.1 (ATCG01100.1 NADH dehydrogenase family protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.5e-27
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

[Close]

BLAST of CmoCh14G010770 vs. TAIR10
Match: ATMG01120.1 (ATMG01120.1 NADH dehydrogenase 1B)

HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 1


Query: 81  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS 115
           V+FLIS LA+  R PFDLP+ E E VAGY  EYS
Sbjct: 188 VMFLISRLAETNRAPFDLPEAEAESVAGYNVEYS 221

[Close]

BLAST of CmoCh14G010770 vs. TAIR10
Match: ATMG00516.1 (ATMG00516.1 NADH dehydrogenase 1C)

HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 1


Query: 81  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS 115
           V+FLIS LA+  R PFDLP+ E E VAGY  EYS
Sbjct: 188 VMFLISRLAETNRAPFDLPEAEAESVAGYNVEYS 221

[Close]

BLAST of CmoCh14G010770 vs. TAIR10
Match: ATMG01275.1 (ATMG01275.1 NADH dehydrogenase 1A)

HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 1


Query: 81  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS 115
           V+FLIS LA+  R PFDLP+ E E VAGY  EYS
Sbjct: 188 VMFLISRLAETNRAPFDLPEAEAESVAGYNVEYS 221

[Close]

BLAST of CmoCh14G010770 vs. NCBI nr
Match: gi|139390404|ref|YP_001123001.1| (NADH dehydrogenase ND1 [Aethionema cordifolium])

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

[Close]

BLAST of CmoCh14G010770 vs. NCBI nr
Match: gi|937632178|gb|ALI89669.1| (NdhA, partial (chloroplast) [Cordia sebestena])

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 185 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEY 244

Query: 114 S 115
           S
Sbjct: 245 S 245

[Close]

BLAST of CmoCh14G010770 vs. NCBI nr
Match: gi|156573605|gb|ABU85138.1| (NADH-plastoquinone oxidoreductase subunit 1 [Yucca schidigera])

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGFV+FLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 191 LSTVDIVEAQSKYGFWGWNLWRQPIGFVVFLISSLAECERLPFDLPEAEEELVAGYQTEY 250

Query: 114 S 115
           S
Sbjct: 251 S 251

[Close]

BLAST of CmoCh14G010770 vs. NCBI nr
Match: gi|810852866|ref|YP_009130091.1| (NADH-plastoquinone oxidoreductase subunit 1 (chloroplast) [Campynema lineare])

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-24
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 1


Query: 55  STVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS 114
           STVDIVEAQSKYDFW WNLW QPIGF++F+ISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Sbjct: 190 STVDIVEAQSKYDFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYS 249

[Close]

BLAST of CmoCh14G010770 vs. NCBI nr
Match: gi|752789742|ref|YP_009115952.1| (NADH dehydrogenase subunit 1 [Scrophularia takesimensis])

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 1


Query: 54  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEY 113
           LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEY
Sbjct: 189 LSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEY 248

Query: 114 S 115
           S
Sbjct: 249 S 249

The following BLAST results are available for this feature:

BLAST of CmoCh14G010770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU1C_AETGR	3.4e-26	86.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema grandiflor...	[more]
NU1C_AETCO	3.4e-26	86.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema cordifoliu...	[more]
NU1C_LEPVR	4.4e-26	85.25	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lepidium virginicum G...	[more]
NU1C_NASOF	4.4e-26	85.25	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nasturtium officinale...	[more]
NU1C_TOBAC	4.4e-26	85.25	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nicotiana tabacum GN=...	[more]

BLAST of CmoCh14G010770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S1RR53_9ASPA	3.7e-24	86.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Polygonatum cyrtonema...	[more]
A0A0S0ZGU9_9ASTE	3.7e-24	86.89	NAD(P)H-quinone oxidoreductase subunit 1 (Fragment) OS=Cordia sebestena GN=ndhA ...	[more]
H2FC85_9ASPA	3.7e-24	86.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Scadoxus cinnabarinus...	[more]
H2FC77_9ASPA	3.7e-24	86.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Polianthes sp. Pires ...	[more]
H2FCB1_MAIST	3.7e-24	86.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Maianthemum stellatum...	[more]

BLAST of CmoCh14G010770 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG01100.1	2.5e-27	85.25	ATCG01100.1 NADH dehydrogenase family protein	[more]
ATMG01120.1	4.1e-06	64.71	ATMG01120.1 NADH dehydrogenase 1B	[more]
ATMG00516.1	4.1e-06	64.71	ATMG00516.1 NADH dehydrogenase 1C	[more]
ATMG01275.1	4.1e-06	64.71	ATMG01275.1 NADH dehydrogenase 1A	[more]

BLAST of CmoCh14G010770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|139390404\|ref\|YP_001123001.1\|	5.4e-24	86.89	NADH dehydrogenase ND1 [Aethionema cordifolium]	[more]
gi\|937632178\|gb\|ALI89669.1\|	5.4e-24	86.89	NdhA, partial (chloroplast) [Cordia sebestena]	[more]
gi\|156573605\|gb\|ABU85138.1\|	5.4e-24	86.89	NADH-plastoquinone oxidoreductase subunit 1 [Yucca schidigera]	[more]
gi\|810852866\|ref\|YP_009130091.1\|	5.4e-24	85.00	NADH-plastoquinone oxidoreductase subunit 1 (chloroplast) [Campynema lineare]	[more]
gi\|752789742\|ref\|YP_009115952.1\|	5.4e-24	86.89	NADH dehydrogenase subunit 1 [Scrophularia takesimensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001694	NADH_UbQ_OxRdtase_su1/FPO

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G010770.1	CmoCh14G010770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 54..114 score: 2.2
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 54..114 score: 1.4
None	No IPR available	PANTHER	PTHR11432:SF7	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 1, CHLOROPLASTIC	coord: 54..114 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G010770	Cucumber (Gy14) v2	cgybcmoB280
CmoCh14G010770	Melon (DHL92) v3.6.1	cmomedB239
CmoCh14G010770	Silver-seed gourd	carcmoB1102
CmoCh14G010770	Cucumber (Chinese Long) v3	cmocucB0271
CmoCh14G010770	Watermelon (97103) v2	cmowmbB229
CmoCh14G010770	Wax gourd	cmowgoB0279
CmoCh14G010770	Cucumber (Gy14) v1	cgycmoB0499
CmoCh14G010770	Cucurbita maxima (Rimu)	cmacmoB244
CmoCh14G010770	Wild cucumber (PI 183967)	cmocpiB231
CmoCh14G010770	Cucumber (Chinese Long) v2	cmocuB228
CmoCh14G010770	Melon (DHL92) v3.5.1	cmomeB210
CmoCh14G010770	Watermelon (Charleston Gray)	cmowcgB206
CmoCh14G010770	Watermelon (97103) v1	cmowmB213
CmoCh14G010770	Cucurbita pepo (Zucchini)	cmocpeB217
CmoCh14G010770	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G010770	Bottle gourd (USVL1VR-Ls)	cmolsiB228