CmoCh14G009070 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G009070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDisease resistance protein
LocationCmo_Chr14 : 4811089 .. 4812047 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATATCGAGAAGTCAGACTATGTAATTAGCTATCTTCTAATACCCTTTTTAACTTAGTCAGCATAAAGCTTTCACATTACTTCAAATTACAAGCTCTCCCACAATTTGATCAATTTGCTTGTCTCAAGTATTTGGATCTTCAATCATTACCCAACCTTGATTACATTGATAACAATGAATATCCTTCTTCATCACTGTTTTTTCCATCTCTTGAGAAATTAGCATCGAAGACATGCACAATTTAAAAGGAGGGTGGAAGAGTGAAACTTTATTGGAAAGCTTCTCCAAACAATTTCCTATAACAATGTGTTGCCTTTGTGAACTTGTGGTAGATGTTTGTCCTCATTTGGTTTTAATTCCTTGGCATGCACCACTCACTCAATTTGAGTGAAATTAGTTCACAACTACTTACTGTGGTAATTGAAAGGAATTGTCAATCAGTGTGTTGAACACTTATCTTTTGTTTACCTTAGTGAAATTGATGATCTTGAGTTTCTACCAAAAGAGTTATTCTATCGTTTCACAAATCTTTGGCATCTTGTAATAGAAGATTGCAAAAGCTTACAAATGTCTTCTTCTCTTGTACAACATTTTATTAATGATGTACTATGGAAAGAGTTTCGAAGTCTTCAGTCTTTACGTTTTTGTAGAATTCTCAAGTTGGAGTATTTGCCTAATGGGATGCGACATGTGACAACTCTTCAAGATATTTACATAGGTGCATGCCCAAATTCAATAACTCTACCAGAATGGATAGGCGAACTCACAACACTCTCAAACCTAATGATCTATCGTTGTCCAAAGCTCAGTTCATTGCCGGAAGGAATTCACCACCTCCGCTCTTTAGAATTATTGAGAATTCGAGATAGCCCCAAATTGATAGAGAGGTACAAGGAAAAAGACGGAGAAGATTGGCAAAAAAATTCTCATATTCGTTACGTAGATATTTCATAA

mRNA sequence

ATGAGGATATCGAGAAGTCAGACTATTGAAATTGATGATCTTGAGTTTCTACCAAAAGAGTTATTCTATCGTTTCACAAATCTTTGGCATCTTGTAATAGAAGATTGCAAAAGCTTACAAATGTCTTCTTCTCTTGTACAACATTTTATTAATGATGTACTATGGAAAGAGTTTCGAAGTCTTCAGTCTTTACGTTTTTGTAGAATTCTCAAGTTGGAGTATTTGCCTAATGGGATGCGACATGTGACAACTCTTCAAGATATTTACATAGGTGCATGCCCAAATTCAATAACTCTACCAGAATGGATAGGCGAACTCACAACACTCTCAAACCTAATGATCTATCGTTGTCCAAAGCTCAGTTCATTGCCGGAAGGAATTCACCACCTCCGCTCTTTAGAATTATTGAGAATTCGAGATAGCCCCAAATTGATAGAGAGGTACAAGGAAAAAGACGGAGAAGATTGGCAAAAAAATTCTCATATTCGTTACGTAGATATTTCATAA

Coding sequence (CDS)

ATGAGGATATCGAGAAGTCAGACTATTGAAATTGATGATCTTGAGTTTCTACCAAAAGAGTTATTCTATCGTTTCACAAATCTTTGGCATCTTGTAATAGAAGATTGCAAAAGCTTACAAATGTCTTCTTCTCTTGTACAACATTTTATTAATGATGTACTATGGAAAGAGTTTCGAAGTCTTCAGTCTTTACGTTTTTGTAGAATTCTCAAGTTGGAGTATTTGCCTAATGGGATGCGACATGTGACAACTCTTCAAGATATTTACATAGGTGCATGCCCAAATTCAATAACTCTACCAGAATGGATAGGCGAACTCACAACACTCTCAAACCTAATGATCTATCGTTGTCCAAAGCTCAGTTCATTGCCGGAAGGAATTCACCACCTCCGCTCTTTAGAATTATTGAGAATTCGAGATAGCCCCAAATTGATAGAGAGGTACAAGGAAAAAGACGGAGAAGATTGGCAAAAAAATTCTCATATTCGTTACGTAGATATTTCATAA
Homology
[Close]
BLAST of CmoCh14G009070 vs. Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15
Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 1 

Query: 17  LPKELFYRFTNLWHLVIEDCKSLQMSSSL------------VQHFINDVLWKEFRSLQSL 76
           L KE   +F  L  ++I +C  L +SS+L            V     + ++K   +L+ L
Sbjct: 805 LKKEGEEQFPVLEEMIIHECPFLTLSSNLRALTSLRICYNKVATSFPEEMFKNLANLKYL 864

Query: 77  RFCRILKLEYLPNGMRHVTTLQDIYIGACPNSITLPE-WIGELTTLSNLMIYRCPKLSSL 136
              R   L+ LP  +  +  L+ + I  C    +LPE  +  L++L+ L +  C  L  L
Sbjct: 865 TISRCNNLKELPTSLASLNALKSLKIQLCCALESLPEEGLEGLSSLTELFVEHCNMLKCL 924

Query: 137 PEGIHHLRSLELLRIRDSPKLIERYKEKDGEDWQKNSHIRYVDI 168
           PEG+ HL +L  L+IR  P+LI+R ++  GEDW K SHI  V+I
Sbjct: 925 PEGLQHLTTLTSLKIRGCPQLIKRCEKGIGEDWHKISHIPNVNI 968

[Close]
BLAST of CmoCh14G009070 vs. Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 46/139 (33.09%), Postives = 75/139 (53.96%), Query Frame = 1 

Query: 33  IEDCKSLQMSSSLVQHFINDVLWKEFRSLQSLRFCRILKLEYL---PNGMRHVTTLQDIY 92
           I +  +L        H +  +L + F++L++L +  +  LE L   P  +  +  L+ + 
Sbjct: 852 ISNLSTLTSLKIFSNHTVTSLLEEMFKNLENLIYLSVSFLENLKELPTSLASLNNLKCLD 911

Query: 93  IGACPNSITLPE-WIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERY 152
           I  C    +LPE  +  L++L+ L +  C  L  LPEG+ HL +L  L+IR  P+LI+R 
Sbjct: 912 IRYCYALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHLTTLTSLKIRGCPQLIKRC 971

Query: 153 KEKDGEDWQKNSHIRYVDI 168
           ++  GEDW K SHI  V+I
Sbjct: 972 EKGIGEDWHKISHIPNVNI 990

[Close]
BLAST of CmoCh14G009070 vs. Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-11
Identity = 39/131 (29.77%), Postives = 67/131 (51.15%), Query Frame = 1 

Query: 38  SLQMSSSLVQHFINDVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSI 97
           SL +S ++    + + ++K   +L+ L+      L+ LP  +  +  L+ +    C    
Sbjct: 847 SLDISDNVEATSLPEEMFKSLANLKYLKISFFRNLKELPTSLASLNALKSLKFEFCDALE 906

Query: 98  TLPE-WIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDW 157
           +LPE  +  LT+L+ L +  C  L  LPEG+ HL +L  L I   P + +R +   GEDW
Sbjct: 907 SLPEEGVKGLTSLTELSVSNCMMLKCLPEGLQHLTALTTLTITQCPIVFKRCERGIGEDW 966

Query: 158 QKNSHIRYVDI 168
            K +HI Y+ +
Sbjct: 967 HKIAHIPYLTL 977

[Close]
BLAST of CmoCh14G009070 vs. Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10
Identity = 38/131 (29.01%), Postives = 70/131 (53.44%), Query Frame = 1 

Query: 38  SLQMSSSLVQHFINDVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSI 97
           SL++ ++     + + ++    +L+ L F     L+ LP  +  +  L+ + I +C +  
Sbjct: 857 SLRIGANYRATSLPEEMFTSLTNLEFLSFFDFKNLKDLPTSLTSLNALKRLQIESCDSLE 916

Query: 98  TLPEW-IGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDW 157
           + PE  +  LT+L+ L +  C  L  LPEG+ HL +L  L +   P++ +R  ++ GEDW
Sbjct: 917 SFPEQGLEGLTSLTQLFVKYCKMLKCLPEGLQHLTALTNLGVSGCPEVEKRCDKEIGEDW 976

Query: 158 QKNSHIRYVDI 168
            K +HI  +DI
Sbjct: 977 HKIAHIPNLDI 987

[Close]
BLAST of CmoCh14G009070 vs. Swiss-Prot
Match: DRL42_ARATH (Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-08
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 1 

Query: 82  VTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDS 141
           ++ LQ+I I  C +   LP WI E+ +L  L I  C KLS LPE I +L  LE+LR+  S
Sbjct: 648 LSKLQEIDIDYCYDLDELPYWISEIVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRLCSS 707

Query: 142 PKLIERYKEKDGEDWQKNSHIRYVDIS 169
             L E  +  +G      S++R++DIS
Sbjct: 708 MNLSELPEATEG-----LSNLRFLDIS 729

[Close]
BLAST of CmoCh14G009070 vs. TrEMBL
Match: A0A0A0K9P7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G425940 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.5e-24
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1 

Query: 3   ISRSQTIEID--DLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFRS 62
           +S+   +EI   DLEFLP ELF   T+L  L+IE CKSLQMSS       NDV+WK+  +
Sbjct: 741 LSKLSFLEIGTIDLEFLPVELFCNMTHLESLIIERCKSLQMSSPHPVDEDNDVVWKKLSN 800

Query: 63  LQSLRFCRILKLEYLPNGMRHVTTLQ-----------------------DIYIGACPNSI 122
           L++LR   ILKLEY P  ++++T+L+                        + I  CPN  
Sbjct: 801 LRTLRLESILKLEYFPKSLKYITSLETLKLSNCENLVSTEGIGELISLSHLEIDRCPNLP 860

Query: 123 TLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKE 151
            L E +G+L +LS+L+I+ CPKL+SL EGI  L SL  L + D P L+   +E
Sbjct: 861 ILSEDVGDLISLSHLLIWNCPKLTSLSEGITRLTSLSSLCLEDCPNLVSLPQE 913

[Close]
BLAST of CmoCh14G009070 vs. TrEMBL
Match: A0A059B3J0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02956 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-22
Identity = 57/137 (41.61%), Postives = 83/137 (60.58%), Query Frame = 1 

Query: 26   TNLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTL 85
            ++L  L I +CK L +SS   +H      W+    L+ L F R+ KL  LP G++H+TTL
Sbjct: 902  SSLQSLDIRECKELDVSSHDDEH---GTQWRSLAKLRHLTFYRLPKLVALPEGIQHITTL 961

Query: 86   QDIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLI 145
            + + +  C N ++LPEWIG  +TL NL +  C KL+ LP+GI  L SL+ LRI   P L 
Sbjct: 962  ESLDVSRCENLMSLPEWIGNFSTLQNLDVSYCSKLTCLPDGISRLTSLKTLRIAGCPVLQ 1021

Query: 146  ERYKEKDGEDWQKNSHI 163
            ER + + G DW+K +H+
Sbjct: 1022 ERCQRECGADWEKIAHL 1035

[Close]
BLAST of CmoCh14G009070 vs. TrEMBL
Match: A5BBK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017638 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.7e-22
Identity = 71/179 (39.66%), Postives = 91/179 (50.84%), Query Frame = 1 

Query: 11   IDDLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFI-------------------- 70
            IDDL  L  E     T+L +L+I DC SL   S  +QH                      
Sbjct: 1008 IDDLISLSSEGLRCLTSLXNLLINDCHSLMHLSQGIQHLTXLKGLRILQCRELDLSDKED 1067

Query: 71   -NDVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSITLPEWIGELTTL 130
             +D  ++  RSL  L    I KL  LP G+  VT+LQ + IG C    TLP+WIG LT+L
Sbjct: 1068 DDDTPFQGLRSLHHLHIQYIPKLVSLPKGLLQVTSLQSLTIGDCSGLATLPDWIGSLTSL 1127

Query: 131  SNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDWQKNSHIRYVDIS 169
              L I  CPKL SLPE I  L +L+ LRI     L+ER + + GEDW K SH+  + I+
Sbjct: 1128 KELQISDCPKLKSLPEEIRCLSTLQTLRISLCRHLLERCQMEIGEDWPKISHVPEIYIN 1186

[Close]
BLAST of CmoCh14G009070 vs. TrEMBL
Match: F6HV99_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00060 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21
Identity = 71/179 (39.66%), Postives = 91/179 (50.84%), Query Frame = 1 

Query: 11  IDDLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFI-------------------- 70
           IDDL  L  E     T+L +L+I DC SL   S  +QH                      
Sbjct: 809 IDDLISLSSEGLRCLTSLSNLLINDCHSLMHLSQGIQHLTTLKGLRILQCRELDLSDKED 868

Query: 71  -NDVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSITLPEWIGELTTL 130
            +D  ++  RSL  L    I KL  LP G+  VT+LQ + IG C    TLP+WIG LT+L
Sbjct: 869 DDDTPFQGLRSLHHLHIQYIPKLVSLPKGLLQVTSLQSLTIGDCSGLATLPDWIGSLTSL 928

Query: 131 SNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDWQKNSHIRYVDIS 169
             L I  CPKL SLPE I  L +L+ LRI     L+ER + + GEDW K SH+  + I+
Sbjct: 929 KELQISDCPKLKSLPEEIRCLSTLQTLRISLCRHLLERCQMEIGEDWPKISHVPEIYIN 987

[Close]
BLAST of CmoCh14G009070 vs. TrEMBL
Match: A0A067KZA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15943 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-21
Identity = 68/168 (40.48%), Postives = 91/168 (54.17%), Query Frame = 1 

Query: 1    MRISRSQTIE-IDDLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFR 60
            +R  RS +IE  + L  LP EL +  T+L HL I  C  L      +QH           
Sbjct: 992  LRSLRSLSIENCNSLTSLPPELQF-LTSLEHLTIMYCPKLANLPDNMQHL---------S 1051

Query: 61   SLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCPK 120
            +L+SL    + +L  LP G+++VT LQ++ I  CP    LP WI  LT+L +L +  C  
Sbjct: 1052 ALRSLSILNLPELSSLPQGLQYVTNLQNLEIRGCPGLEALPNWISNLTSLRSLALSECQN 1111

Query: 121  LSSLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDWQKNSHIRYVDI 168
            L+ LPEG+ HL SL+ L I+D P L ER +   GEDW K  HI YV I
Sbjct: 1112 LTFLPEGLQHLNSLQHLSIQDCPILEERCRRDIGEDWPKIIHIAYVYI 1149

[Close]
BLAST of CmoCh14G009070 vs. TAIR10
Match: AT5G66900.1 (AT5G66900.1 Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 1 

Query: 82  VTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDS 141
           ++ LQ+I I  C +   LP WI E+ +L  L I  C KLS LPE I +L  LE+LR+  S
Sbjct: 648 LSKLQEIDIDYCYDLDELPYWISEIVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRLCSS 707

Query: 142 PKLIERYKEKDGEDWQKNSHIRYVDIS 169
             L E  +  +G      S++R++DIS
Sbjct: 708 MNLSELPEATEG-----LSNLRFLDIS 729

[Close]
BLAST of CmoCh14G009070 vs. TAIR10
Match: AT1G69550.1 (AT1G69550.1 disease resistance protein (TIR-NBS-LRR class))

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09
Identity = 35/120 (29.17%), Postives = 57/120 (47.50%), Query Frame = 1 

Query: 27   NLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTLQ 86
            NL  L + +C SL    S + + IN         L++L       L  LP+ + ++  LQ
Sbjct: 909  NLQELYLSECSSLVELPSSIGNLIN---------LKTLNLSECSSLVELPSSIGNLINLQ 968

Query: 87   DIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIE 146
            ++Y+  C + + LP  IG L  L  L +  C  L  LP  I +L +L+ L + +   L+E
Sbjct: 969  ELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVE 1019

[Close]
BLAST of CmoCh14G009070 vs. TAIR10
Match: AT5G66890.1 (AT5G66890.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1 

Query: 63  SLRFCRILK-LEYLPNGMRHVTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLS 122
           SL FC ++  L  L +    + +LQ+I I  C N   LP WI ++ +L  L +  C KL 
Sbjct: 234 SLWFCHVVDALNELEDVSETLQSLQEIEIDYCYNLDELPYWISQVVSLKKLSVTNCNKLC 293

Query: 123 SLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDWQKNSHIRYVDIS 169
            + E I  LR LE LR+     L+E  +  D  D     ++R++D+S
Sbjct: 294 RVIEAIGDLRDLETLRLSSCASLLELPETIDRLD-----NLRFLDVS 335

[Close]
BLAST of CmoCh14G009070 vs. TAIR10
Match: AT3G25510.1 (AT3G25510.1 disease resistance protein (TIR-NBS-LRR class), putative)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08
Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = 1 

Query: 26   TNLWHLVIEDCKSL-QMSSS---------LVQHFINDVL-----WKEFRSLQSLRFCRIL 85
            TNLW L +  C SL ++ SS         L  H  ++++     +    +L  L      
Sbjct: 877  TNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCS 936

Query: 86   KLEYLPNGMRHVTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHL 141
             L  LP+ + ++T LQ++ +  C N + LP  IG L  L  L + RC KL +LP  I +L
Sbjct: 937  SLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNI-NL 996

[Close]
BLAST of CmoCh14G009070 vs. TAIR10
Match: AT5G66910.1 (AT5G66910.1 Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 1 

Query: 82  VTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDS 141
           ++ LQ+I I  C +   LP WI E+ +L  L I  C KLS LPE I +L  LE+LR+   
Sbjct: 654 LSNLQEIDIDYCYDLDELPYWIPEVVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRMCSC 713

Query: 142 PKLIERYKEKDGEDWQKNSHIRYVDIS 169
             L E       E  ++ S++R +DIS
Sbjct: 714 MNLSEL-----PEATERLSNLRSLDIS 735

[Close]
BLAST of CmoCh14G009070 vs. NCBI nr
Match: gi|778728529|ref|XP_011659434.1| (PREDICTED: putative disease resistance protein RGA1 isoform X1 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-24
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1 

Query: 3    ISRSQTIEID--DLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFRS 62
            +S+   +EI   DLEFLP ELF   T+L  L+IE CKSLQMSS       NDV+WK+  +
Sbjct: 920  LSKLSFLEIGTIDLEFLPVELFCNMTHLESLIIERCKSLQMSSPHPVDEDNDVVWKKLSN 979

Query: 63   LQSLRFCRILKLEYLPNGMRHVTTLQ-----------------------DIYIGACPNSI 122
            L++LR   ILKLEY P  ++++T+L+                        + I  CPN  
Sbjct: 980  LRTLRLESILKLEYFPKSLKYITSLETLKLSNCENLVSTEGIGELISLSHLEIDRCPNLP 1039

Query: 123  TLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKE 151
             L E +G+L +LS+L+I+ CPKL+SL EGI  L SL  L + D P L+   +E
Sbjct: 1040 ILSEDVGDLISLSHLLIWNCPKLTSLSEGITRLTSLSSLCLEDCPNLVSLPQE 1092

[Close]
BLAST of CmoCh14G009070 vs. NCBI nr
Match: gi|700189869|gb|KGN45102.1| (hypothetical protein Csa_7G425940 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-24
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1 

Query: 3   ISRSQTIEID--DLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFRS 62
           +S+   +EI   DLEFLP ELF   T+L  L+IE CKSLQMSS       NDV+WK+  +
Sbjct: 741 LSKLSFLEIGTIDLEFLPVELFCNMTHLESLIIERCKSLQMSSPHPVDEDNDVVWKKLSN 800

Query: 63  LQSLRFCRILKLEYLPNGMRHVTTLQ-----------------------DIYIGACPNSI 122
           L++LR   ILKLEY P  ++++T+L+                        + I  CPN  
Sbjct: 801 LRTLRLESILKLEYFPKSLKYITSLETLKLSNCENLVSTEGIGELISLSHLEIDRCPNLP 860

Query: 123 TLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKE 151
            L E +G+L +LS+L+I+ CPKL+SL EGI  L SL  L + D P L+   +E
Sbjct: 861 ILSEDVGDLISLSHLLIWNCPKLTSLSEGITRLTSLSSLCLEDCPNLVSLPQE 913

[Close]
BLAST of CmoCh14G009070 vs. NCBI nr
Match: gi|778728533|ref|XP_011659435.1| (PREDICTED: putative disease resistance protein RGA1 isoform X2 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-24
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1 

Query: 3    ISRSQTIEID--DLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFINDVLWKEFRS 62
            +S+   +EI   DLEFLP ELF   T+L  L+IE CKSLQMSS       NDV+WK+  +
Sbjct: 920  LSKLSFLEIGTIDLEFLPVELFCNMTHLESLIIERCKSLQMSSPHPVDEDNDVVWKKLSN 979

Query: 63   LQSLRFCRILKLEYLPNGMRHVTTLQ-----------------------DIYIGACPNSI 122
            L++LR   ILKLEY P  ++++T+L+                        + I  CPN  
Sbjct: 980  LRTLRLESILKLEYFPKSLKYITSLETLKLSNCENLVSTEGIGELISLSHLEIDRCPNLP 1039

Query: 123  TLPEWIGELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKE 151
             L E +G+L +LS+L+I+ CPKL+SL EGI  L SL  L + D P L+   +E
Sbjct: 1040 ILSEDVGDLISLSHLLIWNCPKLTSLSEGITRLTSLSSLCLEDCPNLVSLPQE 1092

[Close]
BLAST of CmoCh14G009070 vs. NCBI nr
Match: gi|659131095|ref|XP_008465507.1| (PREDICTED: probable disease resistance protein At4g33300 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23
Identity = 66/146 (45.21%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 3   ISRSQTIEID--DLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFIND--VLWKEF 62
           +S+  T+EI+  D++FLP+ L     +L  L I  CK LQMSSS + +   D  V WKE 
Sbjct: 85  LSKLSTLEIENIDIKFLPEALNCNMKDLQVLSIRSCKYLQMSSSRLVYEEEDRLVYWKEL 144

Query: 63  RSLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSITLPEWIGELTTLSNLMIYRCP 122
            +L+ L F  I KLEYLP G+ ++T L+ +Y+  C N +++ E IG+L++LS+L+I  CP
Sbjct: 145 SNLRHLCFWDIPKLEYLPKGLEYMTALESLYLQECGNLVSI-EGIGQLSSLSDLIICNCP 204

Query: 123 KLSSLPEGIHHLRSLELLRIRDSPKL 145
            L+SLPEG+  L SL  L IRD P L
Sbjct: 205 NLTSLPEGVSGLTSLSYLSIRDCPNL 229

[Close]
BLAST of CmoCh14G009070 vs. NCBI nr
Match: gi|1009161115|ref|XP_015898723.1| (PREDICTED: putative disease resistance protein RGA1 [Ziziphus jujuba])

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 65/181 (35.91%), Postives = 98/181 (54.14%), Query Frame = 1 

Query: 3   ISRSQTIEIDDLEFLPKELFYRFTNLWHLVIEDCKSLQMSSSLVQHFIN----------- 62
           + R + IE DDL +LP   F   T+L  L+ + C  L+  S ++QH I+           
Sbjct: 358 VLRLRNIE-DDLHYLPN-WFKSLTSLRSLIFDGCSKLKHLSPIIQHLISLRDLYIAGCNE 417

Query: 63  -------DVLWKEFRSLQSLRFCRILKLEYLPNGMRHVTTLQDIYIGACPNSITLPEWIG 122
                   + WK  +SL SL F  + +LE  P G+++ TTL+D+    C N   +PEW  
Sbjct: 418 LDMSNAEVISWKACKSLVSLSFNDLPRLETPPEGLQYFTTLRDLGFLECKNLKAIPEWFS 477

Query: 123 ELTTLSNLMIYRCPKLSSLPEGIHHLRSLELLRIRDSPKLIERYKEKDGEDWQKNSHIRY 166
             T+L+   +Y CP L+SLPEGI  + SL+ LRI   P L++R + + GEDW K +HI +
Sbjct: 478 NFTSLTEFRLYVCPNLTSLPEGICSITSLQKLRISGCPILLQRCEREKGEDWPKIAHIPH 536

The following BLAST results are available for this feature:
BLAST of CmoCh14G009070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RGA2_SOLBU8.7e-1532.93Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1[more]
RGA3_SOLBU1.4e-1233.09Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 S... [more]
RGA1_SOLBU4.5e-1129.77Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 S... [more]
RGA4_SOLBU2.2e-1029.01Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 S... [more]
DRL42_ARATH4.6e-0840.23Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g669... [more]
BLAST of CmoCh14G009070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9P7_CUCSA5.5e-2441.04Uncharacterized protein OS=Cucumis sativus GN=Csa_7G425940 PE=3 SV=1[more]
A0A059B3J0_EUCGR2.3e-2241.61Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02956 PE=3 SV=1[more]
A5BBK5_VITVI6.7e-2239.66Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017638 PE=3 SV=1[more]
F6HV99_VITVI1.1e-2139.66Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00060 PE=3 SV=... [more]
A0A067KZA0_JATCU2.6e-2140.48Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15943 PE=3 SV=1[more]
BLAST of CmoCh14G009070 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66900.12.6e-0940.23 Disease resistance protein (CC-NBS-LRR class) family[more]
AT1G69550.13.4e-0929.17 disease resistance protein (TIR-NBS-LRR class)[more]
AT5G66890.11.7e-0833.64 Leucine-rich repeat (LRR) family protein[more]
AT3G25510.12.2e-0832.31 disease resistance protein (TIR-NBS-LRR class), putative[more]
AT5G66910.11.1e-0739.08 Disease resistance protein (CC-NBS-LRR class) family[more]
BLAST of CmoCh14G009070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778728529|ref|XP_011659434.1|7.9e-2441.04PREDICTED: putative disease resistance protein RGA1 isoform X1 [Cucumis sativus][more]
gi|700189869|gb|KGN45102.1|7.9e-2441.04hypothetical protein Csa_7G425940 [Cucumis sativus][more]
gi|778728533|ref|XP_011659435.1|7.9e-2441.04PREDICTED: putative disease resistance protein RGA1 isoform X2 [Cucumis sativus][more]
gi|659131095|ref|XP_008465507.1|2.3e-2345.21PREDICTED: probable disease resistance protein At4g33300 [Cucumis melo][more]
gi|1009161115|ref|XP_015898723.1|1.1e-2235.91PREDICTED: putative disease resistance protein RGA1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G009070.1CmoCh14G009070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 14..153
score: 3.1
NoneNo IPR availablePANTHERPTHR23155:SF563SUBFAMILY NOT NAMEDcoord: 14..153
score: 3.1
NoneNo IPR availableunknownSSF52047RNI-likecoord: 8..166
score: 7.85

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G009070Silver-seed gourdcarcmoB1031
CmoCh14G009070Cucumber (Chinese Long) v3cmocucB0292
CmoCh14G009070Watermelon (97103) v2cmowmbB229
CmoCh14G009070Wax gourdcmowgoB0279
CmoCh14G009070Cucurbita moschata (Rifu)cmocmoB199
CmoCh14G009070Cucurbita moschata (Rifu)cmocmoB203
CmoCh14G009070Cucumber (Gy14) v1cgycmoB0187
CmoCh14G009070Cucurbita maxima (Rimu)cmacmoB244
CmoCh14G009070Cucurbita maxima (Rimu)cmacmoB351
CmoCh14G009070Cucurbita maxima (Rimu)cmacmoB462
CmoCh14G009070Wild cucumber (PI 183967)cmocpiB251
CmoCh14G009070Cucumber (Chinese Long) v2cmocuB246
CmoCh14G009070Melon (DHL92) v3.5.1cmomeB233
CmoCh14G009070Watermelon (Charleston Gray)cmowcgB206
CmoCh14G009070Watermelon (Charleston Gray)cmowcgB209
CmoCh14G009070Watermelon (97103) v1cmowmB213
CmoCh14G009070Cucurbita pepo (Zucchini)cmocpeB224
CmoCh14G009070Cucurbita pepo (Zucchini)cmocpeB241
CmoCh14G009070Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G009070Bottle gourd (USVL1VR-Ls)cmolsiB228
CmoCh14G009070Cucumber (Gy14) v2cgybcmoB456
CmoCh14G009070Melon (DHL92) v3.6.1cmomedB265
CmoCh14G009070Silver-seed gourdcarcmoB0151
CmoCh14G009070Silver-seed gourdcarcmoB0248