CmoCh14G008790 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G008790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	translation elongation factor Ts (EF-Ts), putative
Location	Cmo_Chr14 : 4660447 .. 4665752 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTGCCAATACTGTAACACCACGACTCCATTTCTACTTGCTTGAAGAAAATCACTCCGTCAAGCTTTGTTCATCGCTCCAAACAAGCAGAAAACTGGAAAAGTTTGGTTTGTATCATTGTATGTTGAATTAACCAGTCGTCCACCATCTTCATTCGTCTTCCCGTCCTGTGAAACGGCCTGGTATGGTTTCCGCTTCGTTCTTTAGAGCATTCATATTCAATTCAAAGCTTAAACCTCTCCGTCACTAACCTCTTATTTACATTTTTCGTTGTTGCTCATTGGTAACCATTTCGGTGTTCTTTGTTGATTATTTCGATATATTGATGCTAAGTTTTATCCTCTGTAATTTTTTTTTTTTTTTTTTTTGCTGCTTTCAGAGATTGTTTTTTGAATGCTAGCATGGCGTTTTCTAGAGCTGCAAAACGTTCCCTTGGAATTATGATTGCTAACAGGCTGCTGAACAATGCTAGTCGACGTGGATTTTCCGGTTGCGCAACCAGTAGGATCTTTGTTGGTGAAGGTGTTCAATATGGAAGTTCAGTTCCCTACGCTTCCGATGCCAATTCTGTTCTTTATTCGAGACTTAGTCTGCTGAGAAGATTTAGTGTGGAAACCCCCGCCGGGTCGGACCAGATGAGTCTCATAAGGCAGCTGAGAGAAAGGACTAGTGCACCAATTAAAGACGTCAAGGCTGCTCTTATTGATTGCAATTGGGATATTGGTAAGACATCCTGATAGTTTCTGAAACTTTCTTTTGCTTTCGGTTTCATTGGCTTATATGTAATGTTAGAAGTGCAGAAGCAGCACAGACAGAACTGCGAAAAAGAGGAAAGGTGCTGGCCCTGAAAAAGTCTTCTCGAACTGCTGCTGAAGGGCTTCTTGCCTTGGCCCAAAATGAAACCAAAGCTGTTGTTATTGAACTTAACTGCGAGACTGACTTTGTTGCTAGGAATGAGATTTTTCAATACTTGGTAAGTTTTTGATTGTCTTATTCATTTTTGTGCAACATTTCCATTTCAATAGTGTGAATTACTATGCTTGTAAATGATCATGTGTAGATCGTACGAATTTCTGTAGCTTTCTTCTACAGGAAACCTTGTTCTTTTGCTCATAAGATGTCGTTTTATTTTGATCCCAGGCTCTATCTTTAGCAAGGCAAGCATTGTTGTCTGAGAGTTTGTCTCATGACGTTTCCGGGACTTTTCCTGTTGGACTAGAGCAATTGGAGGTTAGATTTTTGTAAAAAATGCCTGCTTTCTTCTTGAACTTTTGTTACTTAGTCTCATATTTTACGGATGCAAGTAATGATGGGTGAAACTAGCAAATATGGGTGGTATCAGTTGGTTATCGAATGGTTTACATTCGATAGTAGGAGGACCATTTCTTTTTAAGAAATGAAAAATTCATCAATGAATATAAGATGATTTGGGGAGGATCAATTCATTGGAGATGGTCCTGTCTACTCAGGCCTCTTTTCTCTAATCTTCAAGTTGTTTATTCTTCTAACAATGATCCCATGCCTTGGTTTTTTCATCTTCCCAAGGGGATGGGGCACCGTTGCTTTGGGATAGCCTTGTGGCAAGAATTATTGTTTTTCCTCTCTGCTGAATTANTAAAAAAAAAAAAAACAAATGTCCACGTACTTCAACCTTCTATGCAGTAATATCCATCGAACTGAAACTTGAAAACAACCAATTATCTAATTATTATGGAGCATATGCCGTGCCCAAATATTTGCTTATCGTTACCTTTTAAGGGGACCATCTGGATGCAATCCAATTGCATCTAAAGTGCCTTTATCCACAACGAGTTGAAATTGCCCTTCCAAGTTTGTCTCAAGAACATCATCAACCTAAGCCAATGTAAAACAGTACAATTATGATGATCGCACTACTGTAAAATAATGCAATTATGATGATCGCACTATATCATGCATAAACTGAATATAAAATGTTGAGCTTTAAAATTAAAAAAATGGACTAATATTTCCAATCCTGACTATTCACGAATCACAGAAGTGTTGAGCTTCAAAATTTCAGCACGCATGTCCATACTAATACATATGGAATTAGAAACTTCCACAGATCGGAGTAGCAGGGTTGAGTAGAATAATTCTAAGACAGGTTGATAGGACATGAGTTTGTAACTTTTGTGCGTGTAAAATTCTGTATTTCCACTTGCTTTCTGGATCGGCAGATGATTTGCATTCACGACGCTGAAAATTTCAAACAACACCATACAATGCTTGATCCCCGTAATTTAATAACCCAGTTATATAGCTCAAAAAGGCATTGAACCAATGACCGGCTTGTATGATCCAAGGGCATTTAACAACTATCCTTATTTATTAATATGTTTTTTGGAAACTAATTTACTCAACTTTAAAAAGTTTCACAAATAATCTCTAGACATCAAATCATGCTTGATATCAATGATTGACAATATACAGACGTGACAATCATTTCTTGAAACTTAGATGCAACATAATCTGACAAACAATTGGAAGGATTTATGAAGTTGACTAAACAGGTATCCTCCAACTCTATTACATGCCTAATCTGTCTCCCAAATCAAAGTTGTCAATTATCGTCCCTTGCAAAAGTAGAAAAAAAACAAATATTGAGTCTATTTAGATCTAATTCTGAAAACTAAGGATTTAAGGTTGAAAACTCAAGGATCAAACAATCAAATAGACACAAGGATAGACAAAGAATAATAGTAAAAAATCTAATTTACCCTTAAAAAAATGATCAATTGACCCAATTACTTACCCTTTTATGCCTATGGCTAACTGCCAAATAAGGTTACCTAAATTTCAAGATGGACAATGCACTACTCACATCACATGTACCACAAAAGTCATATTAGCCTAATAGTTATGGTGACAGTCATTTAGAAAACATTTAAATTCTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAGCCAGGAACGTACACATGGGGAAAAGAAAATACACGTTCTACAAAAAAACGAAAATAAATCCCTACCAATTCCCAAAGTCCAGAAACACCACCAATTTCGTAAGTAGAAGGTAAGAACTATGTTCCATAGCACATCCAAGAGAGAGACAAGGTGATTTGTGAAGATTTTGAAAAAGAATAAGTACGGTAATCAAAATATCCTCATGCCAAGTCATACCAAAAATTTAATTGTGGAAAAACCATCTCGCTCTGCAAGGCTTCTAGCAAGATCTATTGCCCCTTCACTATAATCAGTTCCTGTCAAATTAGAGAATCTGCAAGCAAGTTCAAGATGACAAACAGTAAGTACCGAAAGCTTATGCCTTCAATTGGTAAATCTATTACGAAAAAGTTTAACCAATTGAAATAAGATACAAGTCAAAAAGAAAACCTTTCTGAAATGTTAGCAAGAATCAAAAAACAAAATTTCGAAACATACCCCTCCTTAGCAAGTTCTTGAAGCAGCAAACCATTTCCCGTCCCAATATCAAGTACACTCCAACTAGACAAGAATTTGGAACCCTGATCACCATTCAGTGACTTAACATTATCAGCTTGATTGGGAAACCGACCTTGCGAAACATCAGAACACAAAATTTTTGTCCAAGAAGCAACAGTTTCCATAACTTCAGGTCCAAACCTGAAGAATGAAGAAAGTATAAAAATAGAAAGCTAGATGAACAAATACAAGTCAAGTCTCTCTTTGATTCTAACCGTCAATGAAGTTGTGCTTGTTTCTTAGCCAAAAAAAAGTCTTGCCCAGTCAATCTAGAAAATCTACTTTATCTTTTCGATCACAGTTTAACAACACAAATTGCATTTAAAAGAACCATAGTCCTCGAGATGTATTATTGAGAAGAATTATCAGGTACAATAATCCTTTGAGTGAACAACACCCAACATCATGTTCAAAAAGTTAAGAGTCTAAGAATAGTTCTATAATTTCTCGATGGAACTAACAGTAGTACAGCACCAACATATAGTATATTGACAGGCAAAAGTGATTAGAGAATATGATCTATAGTTGAATAGCACAGAAGGCCAGAAAACATAATAACATTACCAGAAAATAAGAAAACAAGATACCTTAAGCAATTCTTACGTACCAGACTTCACCAACATGACCATGTTCATGGAAGTTTGTCAATTCATCAGCATATTGAGAATCCCAATAACTTTGGAGACCTAGCATTGATGCCACAGCTTCAGCATCTGGTTCTGTTTCATCCTTGTCAGAACTGAAAATGTAACAAACCTTGTTTAGAATGAAAATACGCTCATTACCAAAAGCATTATACCAGATTAATATGGTCATGCAGTTAAAAATGGAATATTCAACTTTCTTGTCACAAAAATTCTAAGCAAAGGTTTCTTTGATATCCATGAGTGCATAAGTCTATTTACATGTATCTCGACTAATCTCGTGGGATAGCCATCAAAACTCTACTACATTTAGTTGCTGAAGACACTCATAGGATATTAGATCCCAGTAAATAGCTACCTTTAAACCTACTTCTTCATTAGTCCGGCCAACCCATGATGGCTTCTAATCAATTGTTATTGTGACAGTAGTTAAAGCTAAAAGTTGCGAAACAAGGATCTAATCTCTGGGCAAATAAAAAAGGACACATTTACAAAGGTTCTCCCATTCCTCCAGATTGAAGAGCTAAAGGGAAAAACAGTATAGGAAGTCCACACGAAGTCCATTAGACTGAGGAAAGAAATAGCAAGAGATGGGGAAACGGGACTCTCCTCACACCTTCAGGATTCAAGTGTCCGAGAAAGATAAACTACATGAACTGCACCGCGGAACTGTATTCATCTATTCCAGAAATCAACGAGAATAACATGATCATTGAATGCTTTAGGAATCAGTCTAACCAAAAGAAAAAAAAAAAAACAACACGCCAAGTTCCCAACAGTCAAAACAAAAACAGAGTTTTAAAACAGCGCGGTTTCAACTATTTCCAGTTAGATTCACACAGTTCGAAAGAAGAAACTACGCTAGACCTGTAATCCGAAGCGGCACGCAAATTTCCAGCAGATAGAGCCTCGGCAGCGTCGGCATTACGCTGGTCATCGTCGAGGGTGCTACCATACTCACTCTTGATGGACCAAGAGTCAGCGGCCACTGAGCGATCGTCGTCAGAGACCAGATCAACGGCGGACGGAGCACCCCGAGCGTCATCCGGCGTCAATCGCATCGCAGCCATGATCAGAAAAATGGAAGAAAAGAAGAAAAAAAAACCCTAG

mRNA sequence

TAGTTGCCAATACTGTAACACCACGACTCCATTTCTACTTGCTTGAAGAAAATCACTCCGTCAAGCTTTGTTCATCGCTCCAAACAAGCAGAAAACTGGAAAAGTTTGGTTTGTATCATTGTATGTTGAATTAACCAGTCGTCCACCATCTTCATTCGTCTTCCCGTCCTGTGAAACGGCCTGAGATTGTTTTTTGAATGCTAGCATGGCGTTTTCTAGAGCTGCAAAACGTTCCCTTGGAATTATGATTGCTAACAGGCTGCTGAACAATGCTAGTCGACGTGGATTTTCCGGTTGCGCAACCAGTAGGATCTTTGTTGGTGAAGGTGTTCAATATGGAAGTTCAGTTCCCTACGCTTCCGATGCCAATTCTGTTCTTTATTCGAGACTTAGTCTGCTGAGAAGATTTAGTGTGGAAACCCCCGCCGGGTCGGACCAGATGAGTCTCATAAGGCAGCTGAGAGAAAGGACTAGTGCACCAATTAAAGACGTCAAGGCTGCTCTTATTGATTGCAATTGGGATATTGAAGCAGCACAGACAGAACTGCGAAAAAGAGGAAAGGTGCTGGCCCTGAAAAAGTCTTCTCGAACTGCTGCTGAAGGGCTTCTTGCCTTGGCCCAAAATGAAACCAAAGCTGTTGTTATTGAACTTAACTGCGAGACTGACTTTGTTGCTAGGAATGAGATTTTTCAATACTTGGCTCTATCTTTAGCAAGGCAAGCATTGTTGTCTGAGAGTTTGTCTCATGACGTTTCCGGGACTTTTCCTGTTGGACTAGAGCAATTGGAGATGATTTGCATTCACGACGCTGAAAATTTCAAACAACACCATACAATGCTTGATCCCCCCAAAAAAAAGTCTTGCCCAGTCAATCTAGAAAATCTACTTTATCTTTTCGATCACAGTTTAACAACACAAATTGCATTTAAAAGAACCATAGTCCTCGAGATACTTCACCAACATGACCATGTTCATGGAAGTTTGTCAATTCATCAGCATATTGAGAATCCCAATAACTTTGGAGACCTAGCATTGATGCCACAGCTTCAGCATCTGTTAAAGCTAAAAGTTGCGAAACAAGGATCTAATCTCTGGGCAAATAAAAAAGGACACATTTACAAAGCGGCACGCAAATTTCCAGCAGATAGAGCCTCGGCAGCGTCGGCATTACGCTGGTCATCGTCGAGGGTGCTACCATACTCACTCTTGATGGACCAAGAGTCAGCGGCCACTGAGCGATCGTCGTCAGAGACCAGATCAACGGCGGACGGAGCACCCCGAGCGTCATCCGGCGTCAATCGCATCGCAGCCATGATCAGAAAAATGGAAGAAAAGAAGAAAAAAAAACCCTAG

Coding sequence (CDS)

ATGGCGTTTTCTAGAGCTGCAAAACGTTCCCTTGGAATTATGATTGCTAACAGGCTGCTGAACAATGCTAGTCGACGTGGATTTTCCGGTTGCGCAACCAGTAGGATCTTTGTTGGTGAAGGTGTTCAATATGGAAGTTCAGTTCCCTACGCTTCCGATGCCAATTCTGTTCTTTATTCGAGACTTAGTCTGCTGAGAAGATTTAGTGTGGAAACCCCCGCCGGGTCGGACCAGATGAGTCTCATAAGGCAGCTGAGAGAAAGGACTAGTGCACCAATTAAAGACGTCAAGGCTGCTCTTATTGATTGCAATTGGGATATTGAAGCAGCACAGACAGAACTGCGAAAAAGAGGAAAGGTGCTGGCCCTGAAAAAGTCTTCTCGAACTGCTGCTGAAGGGCTTCTTGCCTTGGCCCAAAATGAAACCAAAGCTGTTGTTATTGAACTTAACTGCGAGACTGACTTTGTTGCTAGGAATGAGATTTTTCAATACTTGGCTCTATCTTTAGCAAGGCAAGCATTGTTGTCTGAGAGTTTGTCTCATGACGTTTCCGGGACTTTTCCTGTTGGACTAGAGCAATTGGAGATGATTTGCATTCACGACGCTGAAAATTTCAAACAACACCATACAATGCTTGATCCCCCCAAAAAAAAGTCTTGCCCAGTCAATCTAGAAAATCTACTTTATCTTTTCGATCACAGTTTAACAACACAAATTGCATTTAAAAGAACCATAGTCCTCGAGATACTTCACCAACATGACCATGTTCATGGAAGTTTGTCAATTCATCAGCATATTGAGAATCCCAATAACTTTGGAGACCTAGCATTGATGCCACAGCTTCAGCATCTGTTAAAGCTAAAAGTTGCGAAACAAGGATCTAATCTCTGGGCAAATAAAAAAGGACACATTTACAAAGCGGCACGCAAATTTCCAGCAGATAGAGCCTCGGCAGCGTCGGCATTACGCTGGTCATCGTCGAGGGTGCTACCATACTCACTCTTGATGGACCAAGAGTCAGCGGCCACTGAGCGATCGTCGTCAGAGACCAGATCAACGGCGGACGGAGCACCCCGAGCGTCATCCGGCGTCAATCGCATCGCAGCCATGATCAGAAAAATGGAAGAAAAGAAGAAAAAAAAACCCTAG

Homology

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BLAST of CmoCh14G008790 vs. Swiss-Prot
Match: EFTS_ARATH (Elongation factor Ts, mitochondrial OS=Arabidopsis thaliana GN=EFTS PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.0e-50
Identity = 118/196 (60.20%), Postives = 142/196 (72.45%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF+RA +R +G+   +     +S   +S  A+    +    QY SSVP  S   S++  
Sbjct: 1   MAFARAVRRPIGVFYYSVSSRFSSGNEYSTVASKFETLS---QYKSSVP--SGYTSLVRG 60

Query: 61  RLSLLRRFSVETP-AGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGK 120
             + +R FS E P A SDQMSLI+QLRERTSAPIKDVKA+L++CNWD+EAAQ +LRKRGK
Sbjct: 61  FGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGK 120

Query: 121 VLALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESL 180
           VLA KKSSRTAAEG+LA+AQNE K  VIELNCETDFVARNEIFQYLAL++A+ ALL ES 
Sbjct: 121 VLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESS 180

Query: 181 SHDVSGTFPVGLEQLE 196
           S  VSG FP G E  E
Sbjct: 181 SQQVSGVFPFGPELFE 191

[Close]

BLAST of CmoCh14G008790 vs. Swiss-Prot
Match: EFTS_RICCO (Elongation factor Ts, mitochondrial OS=Ricinus communis GN=EFTS PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-46
Identity = 112/200 (56.00%), Postives = 135/200 (67.50%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MA  R A+R L +M+ +RL N    + +S  A                    DA+   + 
Sbjct: 1   MALYRTARRPLQMMLFSRLGN--PEQNYSSWARK------------------DASQSAFG 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
               +R FS   PA ++QMSLI+QLRERTSAPIKDVKA+L+DCNWDIEAAQ +LRKRGKV
Sbjct: 61  MF--VRLFSAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRKRGKV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LA KKS R A EGLLALAQNE KA +IELNCETDFVARN+IFQ LALSLA+QALL+E+ +
Sbjct: 121 LASKKSGRAATEGLLALAQNEGKAALIELNCETDFVARNDIFQCLALSLAKQALLTENTA 178

Query: 181 HDVSGTFPVGLEQLEMICIH 201
              SG  PVG E LE + I+
Sbjct: 181 QQASGIHPVGPECLEDLMIN 178

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BLAST of CmoCh14G008790 vs. Swiss-Prot
Match: EFTS_ORYSI (Elongation factor Ts, mitochondrial OS=Oryza sativa subsp. indica GN=EFTS PE=3 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-41
Identity = 96/156 (61.54%), Postives = 118/156 (75.64%), Query Frame = 1


Query: 41  GVQYGSSVPYASDANSVLYSRLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAAL 100
           G  Y +   + S +N  +    +LLRRFS E PA S+QM+LI+QLRERTSAPIKDVKA+L
Sbjct: 25  GYSYSAFQAHLSSSN--VDQSATLLRRFSSEVPA-SEQMNLIKQLRERTSAPIKDVKASL 84

Query: 101 IDCNWDIEAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNE 160
           + CNWDI+AAQ +LRKRG VLA KKSSRTAAEGLLA+AQ+E +A V+ELNCETDFVARN+
Sbjct: 85  VSCNWDIDAAQKDLRKRGVVLAAKKSSRTAAEGLLAIAQDEKRAAVVELNCETDFVARND 144

Query: 161 IFQYLALSLARQALLSESLSHDVSGTFPVGLEQLEM 197
           +FQYLA SLA+ AL +      V   FP G + LE+
Sbjct: 145 VFQYLASSLAKLALSARDPGELV---FPFGPDYLEV 174

[Close]

BLAST of CmoCh14G008790 vs. Swiss-Prot
Match: EFTS_ORYSJ (Elongation factor Ts, mitochondrial OS=Oryza sativa subsp. japonica GN=EFTS PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-40
Identity = 95/160 (59.38%), Postives = 119/160 (74.38%), Query Frame = 1


Query: 41  GVQYGSSVPYASDANSVLYSRLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAAL 100
           G  Y +   + S +N  +    +LLRRFS E PA S+QM+LI+QLRERTSAPIKDVKA+L
Sbjct: 25  GYSYSAFQAHLSSSN--VDQSATLLRRFSSEVPA-SEQMNLIKQLRERTSAPIKDVKASL 84

Query: 101 IDCNWDIEAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNE 160
           + CNWDI+ AQ +LRKRG VLA KKSSRTAAEGLLA+AQ+E +A V+ELNCETDFVARN+
Sbjct: 85  VSCNWDIDVAQKDLRKRGVVLAAKKSSRTAAEGLLAIAQDEKRAAVVELNCETDFVARND 144

Query: 161 IFQYLALSLARQALLSESLSHDVSGTFPVGLEQLEMICIH 201
           +FQYLA SLA+ AL +      V   FP G + LE + ++
Sbjct: 145 VFQYLASSLAKLALSARDPGELV---FPFGPDYLENLNVN 178

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BLAST of CmoCh14G008790 vs. Swiss-Prot
Match: EFTS_MAIZE (Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-36
Identity = 107/258 (41.47%), Postives = 148/258 (57.36%), Query Frame = 1


Query: 65  LRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKVLALK 124
           +RRF  E  + S+QM+LI+QLR+RTSAPIKDVKA+L+ CNWDIEAAQ +LRKRG  LA K
Sbjct: 47  IRRFGSEV-SSSEQMNLIKQLRQRTSAPIKDVKASLVTCNWDIEAAQKDLRKRGVALAAK 106

Query: 125 KSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLSHDVS 184
           KSSRTAAEGLLA+AQ++ +A V+ELNCETDFVARN++FQYLA SLA+ AL ++       
Sbjct: 107 KSSRTAAEGLLAIAQDDKRAAVVELNCETDFVARNDVFQYLASSLAKMALSAQGPGELF- 166

Query: 185 GTFPVGLEQLEMICIHDAENFKQHHTMLDPPKKKSCPVNLENLLYLFDHSLTTQIAFKRT 244
              P G E LE + I+           LD P K S    +++ +      +   +  +R 
Sbjct: 167 --MPFGPELLENMPIN-----------LDHP-KLSVETTVQSAVTEVAAMVGENVKLRRG 226

Query: 245 IVLEILHQHDHVHGSLSIHQHIENPNNFGDLALMPQLQHLLKLKVAKQGSNLWANKKGHI 304
            +L         HG +S + H       G +A +  L+      +     ++ ++   HI
Sbjct: 227 FMLSTT-----AHGVVSSYMHTCPQPGMGRIAGLVTLETEDSSTLLDSVKSVGSSIAMHI 283

Query: 305 YKAARKFPADRASAASAL 323
             A   F +    +ASAL
Sbjct: 287 VAAKPLFLSKELVSASAL 283

[Close]

BLAST of CmoCh14G008790 vs. TrEMBL
Match: A0A0A0LBM0_CUCSA (Elongation factor Ts, mitochondrial OS=Cucumis sativus GN=EFTS PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82
Identity = 167/197 (84.77%), Postives = 180/197 (91.37%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF RA KRS+G +I+N LLNNA+R GFS CAT++IFV EGVQYGSSVP   +ANS +YS
Sbjct: 1   MAFCRATKRSIGSLISNGLLNNATRNGFSSCATNKIFVVEGVQYGSSVPDVHEANSAIYS 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
           RLSLLRRFSVETP GS+QMSLI+QLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV
Sbjct: 61  RLSLLRRFSVETPPGSNQMSLIKQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LALKKS+RTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALL+ESLS
Sbjct: 121 LALKKSARTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLTESLS 180

Query: 181 HDVSGTFPVGLEQLEMI 198
           H+  GTFP G EQLE I
Sbjct: 181 HNDLGTFPFGPEQLEGI 197

[Close]

BLAST of CmoCh14G008790 vs. TrEMBL
Match: A0A0B0NWD1_GOSAR (Elongation factor Ts, mitochondrial OS=Gossypium arboreum GN=EFTS PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 115/195 (58.97%), Postives = 141/195 (72.31%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF + AK+ LGI + N  L+  SR G+S  AT      +G  +  S    +   + LY 
Sbjct: 1   MAFFKNAKQPLGIFLYNIRLSTCSRHGYSTWAT------KGTSFAQSTDTKASKTAYLYW 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
              + RRF+ +  + ++QMSLI+QLRERTSAPIKDVKA+L+DCNWDIEAAQ ELRKRGKV
Sbjct: 61  ---VSRRFNSQAASSAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKELRKRGKV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LA+KKSSRTA EGLLALAQNE KA VIELNCETDFVARNEIF+YLAL+LA++AL  ++ S
Sbjct: 121 LAMKKSSRTATEGLLALAQNEGKAAVIELNCETDFVARNEIFEYLALALAKKALFVQNSS 180

Query: 181 HDVSGTFPVGLEQLE 196
             + G F  G E LE
Sbjct: 181 QQIPGVFSFGPECLE 186

[Close]

BLAST of CmoCh14G008790 vs. TrEMBL
Match: A0A0D2VLD2_GOSRA (Elongation factor Ts, mitochondrial OS=Gossypium raimondii GN=EFTS PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.6e-49
Identity = 136/301 (45.18%), Postives = 179/301 (59.47%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF R AK+ LGI++ N  L+  SR G+S  AT      +G  +  S    +   + LY 
Sbjct: 1   MAFFRNAKQPLGILLYNTRLSTCSRHGYSTWAT------KGTSFAQSTDTKASKTAYLYW 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
              + RRF+ +  + ++QMSLI+QLRERTSAPIKDVKA+L+DCNWDIEAAQ ELRKRG V
Sbjct: 61  ---VSRRFNSQAASSAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKELRKRGNV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LA+KKSSRTA EGLLALAQ E KA VIELNCETDFVARNEIF+YLAL+LA++AL  ++ S
Sbjct: 121 LAMKKSSRTATEGLLALAQLEGKAAVIELNCETDFVARNEIFEYLALALAKKALFVQNSS 180

Query: 181 HDVSGTFPVGLEQLEMICIHDAENFKQHHTMLDPPKKKSCPVNLENLLYLFDHSLTTQIA 240
             + G F  G E LE + ++           LD P K S    ++N +      +   I 
Sbjct: 181 QQIPGVFSFGPECLEDLKLN-----------LDHP-KISGETTIQNAVTEVAAMMGENIK 240

Query: 241 FKRTIVLEILHQHDHVHGSLSIHQHIENPNNFGDLALMPQLQHLLKLKVAKQGSNLWANK 300
            +R +V+         HG +S + H       G +A       +L L+V  + S L A +
Sbjct: 241 LRRGVVMS-----TSSHGVVSAYLHRCPQPGLGRIA------GILSLEVENEISQLDALQ 269

Query: 301 K 302
           K
Sbjct: 301 K 269

[Close]

BLAST of CmoCh14G008790 vs. TrEMBL
Match: A0A0D2SLI2_GOSRA (Elongation factor Ts, mitochondrial OS=Gossypium raimondii GN=EFTS PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.6e-49
Identity = 136/301 (45.18%), Postives = 179/301 (59.47%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF R AK+ LGI++ N  L+  SR G+S  AT      +G  +  S    +   + LY 
Sbjct: 1   MAFFRNAKQPLGILLYNTRLSTCSRHGYSTWAT------KGTSFAQSTDTKASKTAYLYW 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
              + RRF+ +  + ++QMSLI+QLRERTSAPIKDVKA+L+DCNWDIEAAQ ELRKRG V
Sbjct: 61  ---VSRRFNSQAASSAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKELRKRGNV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LA+KKSSRTA EGLLALAQ E KA VIELNCETDFVARNEIF+YLAL+LA++AL  ++ S
Sbjct: 121 LAMKKSSRTATEGLLALAQLEGKAAVIELNCETDFVARNEIFEYLALALAKKALFVQNSS 180

Query: 181 HDVSGTFPVGLEQLEMICIHDAENFKQHHTMLDPPKKKSCPVNLENLLYLFDHSLTTQIA 240
             + G F  G E LE + ++           LD P K S    ++N +      +   I 
Sbjct: 181 QQIPGVFSFGPECLEDLKLN-----------LDHP-KISGETTIQNAVTEVAAMMGENIK 240

Query: 241 FKRTIVLEILHQHDHVHGSLSIHQHIENPNNFGDLALMPQLQHLLKLKVAKQGSNLWANK 300
            +R +V+         HG +S + H       G +A       +L L+V  + S L A +
Sbjct: 241 LRRGVVMS-----TSSHGVVSAYLHRCPQPGLGRIA------GILSLEVENEISQLDALQ 269

Query: 301 K 302
           K
Sbjct: 301 K 269

[Close]

BLAST of CmoCh14G008790 vs. TrEMBL
Match: A0A078HQF9_BRANA (Elongation factor Ts, mitochondrial OS=Brassica napus GN=BnaC09g26150D PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.6e-49
Identity = 124/212 (58.49%), Postives = 148/212 (69.81%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGV---QYGSSVP--YASDAN 60
           MAF+R A+R LG+ + +     ASRR   G   S     +     QY SSVP  YA+   
Sbjct: 1   MAFAREARRPLGVFVYS-----ASRRFGCGNEYSTTVASKWESMSQYRSSVPSGYANPVR 60

Query: 61  SVLYSRLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELR 120
                  +LLR FS E PA  DQMSLI+QLR+RTSAPIKDVKA+L++CNWDIEAAQ +LR
Sbjct: 61  GFG----NLLRSFSSEAPAVVDQMSLIKQLRQRTSAPIKDVKASLVECNWDIEAAQKDLR 120

Query: 121 KRGKVLALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALL 180
           KRGKVLA KKSSRTAAEG+LA+AQNE K  VIELNCETDFVARN+IFQYLAL++AR+ALL
Sbjct: 121 KRGKVLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNDIFQYLALAMARRALL 180

Query: 181 SESLSHDVSGTFPVG---LEQLEMICIHDAEN 205
            E+ S  VSG FP G    E+L++   H   N
Sbjct: 181 VENSSQQVSGVFPFGPDLFEELKLNLDHPKVN 203

[Close]

BLAST of CmoCh14G008790 vs. TAIR10
Match: AT4G11120.1 (AT4G11120.1 translation elongation factor Ts (EF-Ts), putative)

HSP 1 Score: 199.9 bits (507), Expect = 2.8e-51
Identity = 118/196 (60.20%), Postives = 142/196 (72.45%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF+RA +R +G+   +     +S   +S  A+    +    QY SSVP  S   S++  
Sbjct: 1   MAFARAVRRPIGVFYYSVSSRFSSGNEYSTVASKFETLS---QYKSSVP--SGYTSLVRG 60

Query: 61  RLSLLRRFSVETP-AGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGK 120
             + +R FS E P A SDQMSLI+QLRERTSAPIKDVKA+L++CNWD+EAAQ +LRKRGK
Sbjct: 61  FGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGK 120

Query: 121 VLALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESL 180
           VLA KKSSRTAAEG+LA+AQNE K  VIELNCETDFVARNEIFQYLAL++A+ ALL ES 
Sbjct: 121 VLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESS 180

Query: 181 SHDVSGTFPVGLEQLE 196
           S  VSG FP G E  E
Sbjct: 181 SQQVSGVFPFGPELFE 191

[Close]

BLAST of CmoCh14G008790 vs. TAIR10
Match: AT4G29060.1 (AT4G29060.1 elongation factor Ts family protein)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 1


Query: 80  SLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKVLALKKSSRTAAEGLLALAQ 139
           +L++QLRE T A + D K AL     D+E AQ  LRK+G   A KKSSR A+EG +    
Sbjct: 760 ALVKQLREETGAGMMDCKKALAATGGDLEKAQEFLRKKGLSSADKKSSRLASEGRIGSYI 819

Query: 140 NETK-AVVIELNCETDFVARNEIFQYLALSLARQALLSESLSHDVSGTFPVGLEQLE 196
           ++++  V+IE+NCETDFV R+E F+ L   LA QA+ +  + +      P  ++Q E
Sbjct: 820 HDSRIGVLIEVNCETDFVGRSEKFKELVDDLAMQAVANPQVQYVSIEDIPEEIKQKE 876

[Close]

BLAST of CmoCh14G008790 vs. NCBI nr
Match: gi|659114555|ref|XP_008457112.1| (PREDICTED: elongation factor Ts, mitochondrial [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 8.2e-85
Identity = 170/197 (86.29%), Postives = 181/197 (91.88%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF RA KRS+G +I+N LLNNA+R GFS CAT++ FV EGVQYGSSVPY  DANS +YS
Sbjct: 1   MAFCRATKRSIGSLISNGLLNNATRHGFSSCATNKTFVVEGVQYGSSVPYVHDANSAIYS 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
           RLSLLRRFSVETP GSDQMSLI+QLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV
Sbjct: 61  RLSLLRRFSVETPPGSDQMSLIKQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LALKKS+RTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLA+QALLSESLS
Sbjct: 121 LALKKSARTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLAKQALLSESLS 180

Query: 181 HDVSGTFPVGLEQLEMI 198
           H+  GTFPVG EQLE I
Sbjct: 181 HNDPGTFPVGPEQLEGI 197

[Close]

BLAST of CmoCh14G008790 vs. NCBI nr
Match: gi|449445955|ref|XP_004140737.1| (PREDICTED: elongation factor Ts, mitochondrial [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 167/197 (84.77%), Postives = 180/197 (91.37%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF RA KRS+G +I+N LLNNA+R GFS CAT++IFV EGVQYGSSVP   +ANS +YS
Sbjct: 1   MAFCRATKRSIGSLISNGLLNNATRNGFSSCATNKIFVVEGVQYGSSVPDVHEANSAIYS 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
           RLSLLRRFSVETP GS+QMSLI+QLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV
Sbjct: 61  RLSLLRRFSVETPPGSNQMSLIKQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LALKKS+RTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALL+ESLS
Sbjct: 121 LALKKSARTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLTESLS 180

Query: 181 HDVSGTFPVGLEQLEMI 198
           H+  GTFP G EQLE I
Sbjct: 181 HNDLGTFPFGPEQLEGI 197

[Close]

BLAST of CmoCh14G008790 vs. NCBI nr
Match: gi|645246294|ref|XP_008229287.1| (PREDICTED: elongation factor Ts, mitochondrial [Prunus mume])

HSP 1 Score: 208.0 bits (528), Expect = 2.9e-50
Identity = 151/312 (48.40%), Postives = 185/312 (59.29%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLN-------------NASRRGFSGCATSR-IFVGEGVQYGS 60
           MAF   AKRSLG  + NR+LN             +A+ RGFS   +SR     +  +  +
Sbjct: 1   MAFRGGAKRSLGSFLCNRVLNTSYSSSSTCTVSADANGRGFSTWVSSRRSSFAQATEIPT 60

Query: 61  SVPYASDANSVLYSRLSLLRRFSVETPAGS--DQMSLIRQLRERTSAPIKDVKAALIDCN 120
           S+P    AN+   S L  LRRFSV T + S  DQMSLI+QLRERTSAPIKDVKAALID N
Sbjct: 61  SIPLKF-ANTQCGSAL-FLRRFSVGTSSSSSSDQMSLIKQLRERTSAPIKDVKAALIDSN 120

Query: 121 WDIEAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQY 180
           WDIEAAQ ELR+RGKVLA KKSSR AAEGLLAL QNE+KA VIELNCETDFVARN+IFQ+
Sbjct: 121 WDIEAAQKELRRRGKVLASKKSSRMAAEGLLALVQNESKAAVIELNCETDFVARNDIFQH 180

Query: 181 LALSLARQALLSESLSHDVSGTFPVGLEQLEMICIHDAENFKQHHTMLDPPKKKSCPVNL 240
           LAL+LA+QALL ES S  VSG F V  E LE + ++           L+ P K S    +
Sbjct: 181 LALALAKQALLVESSSQLVSGVFHVPSEDLEDLKLN-----------LEHP-KVSGETTV 240

Query: 241 ENLLYLFDHSLTTQIAFKRTIVLEILHQHDHVHGSLSIHQHIENPNNFGDLALMPQLQHL 297
           +N +      +   +  +R IV+       + HG LS + H       G +A       +
Sbjct: 241 QNAITEVAAVMGENVKLRRGIVMS-----TNSHGVLSTYLHTSPQPGLGRIA------GI 287

[Close]

BLAST of CmoCh14G008790 vs. NCBI nr
Match: gi|728837697|gb|KHG17140.1| (Elongation factor Ts, mitochondrial [Gossypium arboreum])

HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49
Identity = 115/195 (58.97%), Postives = 141/195 (72.31%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF + AK+ LGI + N  L+  SR G+S  AT      +G  +  S    +   + LY 
Sbjct: 1   MAFFKNAKQPLGIFLYNIRLSTCSRHGYSTWAT------KGTSFAQSTDTKASKTAYLYW 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
              + RRF+ +  + ++QMSLI+QLRERTSAPIKDVKA+L+DCNWDIEAAQ ELRKRGKV
Sbjct: 61  ---VSRRFNSQAASSAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKELRKRGKV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LA+KKSSRTA EGLLALAQNE KA VIELNCETDFVARNEIF+YLAL+LA++AL  ++ S
Sbjct: 121 LAMKKSSRTATEGLLALAQNEGKAAVIELNCETDFVARNEIFEYLALALAKKALFVQNSS 180

Query: 181 HDVSGTFPVGLEQLE 196
             + G F  G E LE
Sbjct: 181 QQIPGVFSFGPECLE 186

[Close]

BLAST of CmoCh14G008790 vs. NCBI nr
Match: gi|823266700|ref|XP_012466051.1| (PREDICTED: elongation factor Ts, mitochondrial isoform X2 [Gossypium raimondii])

HSP 1 Score: 203.0 bits (515), Expect = 9.4e-49
Identity = 136/301 (45.18%), Postives = 179/301 (59.47%), Query Frame = 1


Query: 1   MAFSRAAKRSLGIMIANRLLNNASRRGFSGCATSRIFVGEGVQYGSSVPYASDANSVLYS 60
           MAF R AK+ LGI++ N  L+  SR G+S  AT      +G  +  S    +   + LY 
Sbjct: 1   MAFFRNAKQPLGILLYNTRLSTCSRHGYSTWAT------KGTSFAQSTDTKASKTAYLYW 60

Query: 61  RLSLLRRFSVETPAGSDQMSLIRQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120
              + RRF+ +  + ++QMSLI+QLRERTSAPIKDVKA+L+DCNWDIEAAQ ELRKRG V
Sbjct: 61  ---VSRRFNSQAASSAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKELRKRGNV 120

Query: 121 LALKKSSRTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLSESLS 180
           LA+KKSSRTA EGLLALAQ E KA VIELNCETDFVARNEIF+YLAL+LA++AL  ++ S
Sbjct: 121 LAMKKSSRTATEGLLALAQLEGKAAVIELNCETDFVARNEIFEYLALALAKKALFVQNSS 180

Query: 181 HDVSGTFPVGLEQLEMICIHDAENFKQHHTMLDPPKKKSCPVNLENLLYLFDHSLTTQIA 240
             + G F  G E LE + ++           LD P K S    ++N +      +   I 
Sbjct: 181 QQIPGVFSFGPECLEDLKLN-----------LDHP-KISGETTIQNAVTEVAAMMGENIK 240

Query: 241 FKRTIVLEILHQHDHVHGSLSIHQHIENPNNFGDLALMPQLQHLLKLKVAKQGSNLWANK 300
            +R +V+         HG +S + H       G +A       +L L+V  + S L A +
Sbjct: 241 LRRGVVMS-----TSSHGVVSAYLHRCPQPGLGRIA------GILSLEVENEISQLDALQ 269

Query: 301 K 302
           K
Sbjct: 301 K 269

The following BLAST results are available for this feature:

BLAST of CmoCh14G008790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EFTS_ARATH	5.0e-50	60.20	Elongation factor Ts, mitochondrial OS=Arabidopsis thaliana GN=EFTS PE=2 SV=1	[more]
EFTS_RICCO	2.0e-46	56.00	Elongation factor Ts, mitochondrial OS=Ricinus communis GN=EFTS PE=3 SV=1	[more]
EFTS_ORYSI	4.2e-41	61.54	Elongation factor Ts, mitochondrial OS=Oryza sativa subsp. indica GN=EFTS PE=3 S...	[more]
EFTS_ORYSJ	1.2e-40	59.38	Elongation factor Ts, mitochondrial OS=Oryza sativa subsp. japonica GN=EFTS PE=2...	[more]
EFTS_MAIZE	1.4e-36	41.47	Elongation factor Ts, mitochondrial OS=Zea mays GN=EFTS PE=2 SV=1	[more]

BLAST of CmoCh14G008790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBM0_CUCSA	1.2e-82	84.77	Elongation factor Ts, mitochondrial OS=Cucumis sativus GN=EFTS PE=3 SV=1	[more]
A0A0B0NWD1_GOSAR	1.7e-49	58.97	Elongation factor Ts, mitochondrial OS=Gossypium arboreum GN=EFTS PE=3 SV=1	[more]
A0A0D2VLD2_GOSRA	6.6e-49	45.18	Elongation factor Ts, mitochondrial OS=Gossypium raimondii GN=EFTS PE=3 SV=1	[more]
A0A0D2SLI2_GOSRA	6.6e-49	45.18	Elongation factor Ts, mitochondrial OS=Gossypium raimondii GN=EFTS PE=3 SV=1	[more]
A0A078HQF9_BRANA	8.6e-49	58.49	Elongation factor Ts, mitochondrial OS=Brassica napus GN=BnaC09g26150D PE=3 SV=1	[more]

BLAST of CmoCh14G008790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11120.1	2.8e-51	60.20	translation elongation factor Ts (EF-Ts), putative	[more]
AT4G29060.1	1.2e-14	41.88	elongation factor Ts family protein	[more]

BLAST of CmoCh14G008790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114555\|ref\|XP_008457112.1\|	8.2e-85	86.29	PREDICTED: elongation factor Ts, mitochondrial [Cucumis melo]	[more]
gi\|449445955\|ref\|XP_004140737.1\|	1.7e-82	84.77	PREDICTED: elongation factor Ts, mitochondrial [Cucumis sativus]	[more]
gi\|645246294\|ref\|XP_008229287.1\|	2.9e-50	48.40	PREDICTED: elongation factor Ts, mitochondrial [Prunus mume]	[more]
gi\|728837697\|gb\|KHG17140.1\|	2.5e-49	58.97	Elongation factor Ts, mitochondrial [Gossypium arboreum]	[more]
gi\|823266700\|ref\|XP_012466051.1\|	9.4e-49	45.18	PREDICTED: elongation factor Ts, mitochondrial isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001816	Transl_elong_EFTs/EF1B
IPR009060	UBA-like_sf
IPR014039	Transl_elong_EFTs/EF1B_dimer
IPR018101	Transl_elong_Ts_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003746	translation elongation factor activity
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006414	translational elongation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G008790.1	CmoCh14G008790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001816	Translation elongation factor EFTs/EF1B	HAMAP	MF_00050	EF_Ts	coord: 79..174 score: 15
IPR001816	Translation elongation factor EFTs/EF1B	PANTHER	PTHR11741	ELONGATION FACTOR TS	coord: 65..195 score: 1.1
IPR009060	UBA-like	unknown	SSF46934	UBA-like	coord: 79..128 score: 2.72
IPR014039	Translation elongation factor EFTs/EF1B, dimerisation	GENE3D	G3DSA:3.30.479.20		coord: 130..182 score: 1.6
IPR014039	Translation elongation factor EFTs/EF1B, dimerisation	PFAM	PF00889	EF_TS	coord: 144..178 score: 6.
IPR014039	Translation elongation factor EFTs/EF1B, dimerisation	unknown	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain	coord: 209..214 score: 6.21E-15coord: 127..181 score: 6.21
IPR018101	Translation elongation factor Ts, conserved site	PROSITE	PS01127	EF_TS_2	coord: 148..158 scor
None	No IPR available	GENE3D	G3DSA:1.10.8.10		coord: 79..128 score: 7.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G008790	CmaCh14G008650	Cucurbita maxima (Rimu)	cmacmoB244
CmoCh14G008790	CmaCh01G003400	Cucurbita maxima (Rimu)	cmacmoB462
CmoCh14G008790	Cla013147	Watermelon (97103) v1	cmowmB232
CmoCh14G008790	MELO3C020320	Melon (DHL92) v3.5.1	cmomeB231
CmoCh14G008790	ClCG05G010720	Watermelon (Charleston Gray)	cmowcgB220
CmoCh14G008790	Lsi05G002770	Bottle gourd (USVL1VR-Ls)	cmolsiB237
CmoCh14G008790	Cp4.1LG03g05770	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G008790	Cp4.1LG02g16640	Cucurbita pepo (Zucchini)	cmocpeB241
CmoCh14G008790	MELO3C020320.2	Melon (DHL92) v3.6.1	cmomedB261
CmoCh14G008790	Cla97C05G093040	Watermelon (97103) v2	cmowmbB244
CmoCh14G008790	Bhi01G001323	Wax gourd	cmowgoB0322
CmoCh14G008790	Carg24237	Silver-seed gourd	carcmoB0248
CmoCh14G008790	Carg07432	Silver-seed gourd	carcmoB1031

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G008790	CmoCh01G003570	Cucurbita moschata (Rifu)	cmocmoB203

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G008790	Wild cucumber (PI 183967)	cmocpiB235
CmoCh14G008790	Cucumber (Chinese Long) v2	cmocuB232
CmoCh14G008790	Cucumber (Gy14) v2	cgybcmoB285
CmoCh14G008790	Cucumber (Chinese Long) v3	cmocucB0276
CmoCh14G008790	Cucumber (Gy14) v1	cgycmoB0246