CmoCh14G008570 (gene) Cucurbita moschata (Rifu)

NameCmoCh14G008570
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMLP-like protein 43
LocationCmo_Chr14 : 4529015 .. 4529568 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAAGCTTGAACATGGCCAGATTGCTAAGATCTCGCAGCCTGTGCAGCTCAAGTGTTGTGGTCACAAGTTCTACTAGCGGTAGGTTTGAGCCGTTACATAAATAGATCTAGGTAACGATTCTTACCCATTTTTTGTGTGTGAAAACTACATAGGAAGCCCAAGAGAAGCAAAGACGAGGGTAGCTATCGATGATGCAAACAAATCAATAACATTCCAGTACCGGGAAGGAGATGTATTAAGAGATTTTGAAGTATTTCAAATGAAAATTGAAGTTGTTGAGAATGGTAGCAATGGGAGCTCCGTGGAGTATGTGAAGGCAAATGAAGATGTGGCTCCACCACATAACTATCTTCTATGCGTAGCAAAAGTCAGCAAAGGCCTTGATGAGTACCTTTGCAACAACTGAGCTAAACACCATCCATCTGGTTTGGCTAATCAAATCTGATCTAAATAAACTCTCTCCTTATCTTAATTAATGTTCTTCTTATCTTGTGTGCTTCTAAAGCTTAATTGCAAGAAATAATAATGGTGATCTATGATGCCTTCTTCTA

mRNA sequence

TTTGAAGCTTGAACATGGCCAGATTGCTAAGATCTCGCAGCCTGTGCAGCTCAAGTGTTGTGGTCACAAGTTCTACTAGCGGAAGCCCAAGAGAAGCAAAGACGAGGGTAGCTATCGATGATGCAAACAAATCAATAACATTCCAGTACCGGGAAGGAGATGTATTAAGAGATTTTGAAGTATTTCAAATGAAAATTGAAGTTGTTGAGAATGGTAGCAATGGGAGCTCCGTGGAGTATGTGAAGGCAAATGAAGATGTGGCTCCACCACATAACTATCTTCTATGCGTAGCAAAAGTCAGCAAAGGCCTTGATGAGTACCTTTGCAACAACTGAGCTAAACACCATCCATCTGGTTTGGCTAATCAAATCTGATCTAAATAAACTCTCTCCTTATCTTAATTAATGTTCTTCTTATCTTGTGTGCTTCTAAAGCTTAATTGCAAGAAATAATAATGGTGATCTATGATGCCTTCTTCTA

Coding sequence (CDS)

ATGGCCAGATTGCTAAGATCTCGCAGCCTGTGCAGCTCAAGTGTTGTGGTCACAAGTTCTACTAGCGGAAGCCCAAGAGAAGCAAAGACGAGGGTAGCTATCGATGATGCAAACAAATCAATAACATTCCAGTACCGGGAAGGAGATGTATTAAGAGATTTTGAAGTATTTCAAATGAAAATTGAAGTTGTTGAGAATGGTAGCAATGGGAGCTCCGTGGAGTATGTGAAGGCAAATGAAGATGTGGCTCCACCACATAACTATCTTCTATGCGTAGCAAAAGTCAGCAAAGGCCTTGATGAGTACCTTTGCAACAACTGA
BLAST of CmoCh14G008570 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 4.7e-06
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1

Query: 23  GSPREAKTRV-AIDDANKSITFQYREGDVLRDFEVFQMKIEVV-ENGSNGS----SVEYV 82
           G  + AK R+ A++     ITF+  EGD+L++++ F + I+V  + G  GS     VEY 
Sbjct: 81  GEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYE 140

Query: 83  KANEDVAPPHNYLLCVAKVSKGLDEYLCN 106
           K ++ VA P  +L    +VSK +DE+L N
Sbjct: 141 KIDDKVAHPETFLDFCVEVSKEIDEHLLN 169

BLAST of CmoCh14G008570 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           +++        S++     +G P E K R+AIDDANKSITF+  EGD LR+FEV ++K +
Sbjct: 44  KVVEGNGFSDGSIIHLKFNAGKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQ 103

Query: 63  VVENGSNGS----SVEYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V+ENG+NG     S+E+VKANEDVA PH+YLLCV KV+KGLD+YLCNN
Sbjct: 104 VLENGNNGGTVNWSIEFVKANEDVASPHHYLLCVTKVAKGLDDYLCNN 151

BLAST of CmoCh14G008570 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.4e-22
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           ++L       +SV+      G P E K R+A DDANKSI F+  EGD+LRDFEVF+MK++
Sbjct: 43  KILEGNGFAHASVIHIKYNIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQ 102

Query: 63  V-VENGSNGS----SVEYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V  E GSNGS    S+E+VKANEDVA PH YL   A+ SK LD+YLCNN
Sbjct: 103 VNNEKGSNGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 151

BLAST of CmoCh14G008570 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-21
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           ++L        SV+      G P E K R+A DDANKSI F+  EGD+ RDFEVF+MK++
Sbjct: 57  KILEGNGFAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQ 116

Query: 63  VV-ENGSNGSSV----EYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V+ E GSNGSSV    E+VK NEDVA PH+YL   A+ SK LD+YLCNN
Sbjct: 117 VINEKGSNGSSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 165

BLAST of CmoCh14G008570 vs. TrEMBL
Match: A0A0A0L7P3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G334350 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-17
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 1

Query: 23  GSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIEVVENGSNGS-----SVEYVK 82
           G P E KTR+ +D+ NK++ F+  EGD+L+DFE+FQ+K+EV + G NG      SV ++K
Sbjct: 7   GIPAEVKTRLLVDEPNKAVIFECVEGDLLKDFEMFQVKVEVRDGGKNGVSSVKWSVGFMK 66

Query: 83  ANEDVAPPHNYLLCVAKVSKGLDEYL 104
           ANEDVAPPHNYL    KV KGLD YL
Sbjct: 67  ANEDVAPPHNYLQFGVKVCKGLDAYL 92

BLAST of CmoCh14G008570 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.9e-16
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 1

Query: 23  GSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIEVVENGSNGSS-----VEYVK 82
           G   E+K R+ +D+ NKSI  +  EGDVL++F+VF++K++V ++   G +     VE+VK
Sbjct: 65  GGLEESKVRLTVDEPNKSIAMECLEGDVLKEFQVFKVKVQVKDSDVVGVNSVKWCVEFVK 124

Query: 83  ANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           ANEDVAPP+N+L C  KV K LD YLCNN
Sbjct: 125 ANEDVAPPNNHLKCGIKVCKDLDAYLCNN 153

BLAST of CmoCh14G008570 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31)

HSP 1 Score: 52.0 bits (123), Expect = 2.6e-07
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1

Query: 23  GSPREAKTRV-AIDDANKSITFQYREGDVLRDFEVFQMKIEVV-ENGSNGS----SVEYV 82
           G  + AK R+ A++     ITF+  EGD+L++++ F + I+V  + G  GS     VEY 
Sbjct: 81  GEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYE 140

Query: 83  KANEDVAPPHNYLLCVAKVSKGLDEYLCN 106
           K ++ VA P  +L    +VSK +DE+L N
Sbjct: 141 KIDDKVAHPETFLDFCVEVSKEIDEHLLN 169

BLAST of CmoCh14G008570 vs. TAIR10
Match: AT1G23120.1 (AT1G23120.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 26/85 (30.59%), Postives = 46/85 (54.12%), Query Frame = 1

Query: 23  GSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIEVVENGSNGS----SVEYVKA 82
           G   + K ++ +D+ NKS++F   EGDVL+ ++ +++ ++VV           + EY K 
Sbjct: 60  GKMEQIKEKIDVDEENKSVSFLALEGDVLKQYKSYKITLDVVPKDHKVCIAKWTWEYEKL 119

Query: 83  NEDVAPPHNYLLCVAKVSKGLDEYL 104
           N+DV PP  Y   V   ++ L+  L
Sbjct: 120 NDDVPPPTRYTAFVEDYTRDLETRL 144

BLAST of CmoCh14G008570 vs. TAIR10
Match: AT1G70870.1 (AT1G70870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 8.5e-06
Identity = 30/97 (30.93%), Postives = 47/97 (48.45%), Query Frame = 1

Query: 11  CSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIEVVENGSNG 70
           C  +   T S  G   + K RV ID+ANKS+T    EGDV+ ++  F   ++++      
Sbjct: 40  CKGTKNWTLSVDGKVEKMKERVEIDEANKSMTVFVFEGDVMENYSSFTCNLQIIPKLHGR 99

Query: 71  S----SVEYVKANEDVAPPHNYLLCVAKVSKGLDEYL 104
           S    S EY K N D   P+ Y+     ++K ++  L
Sbjct: 100 SIARWSWEYEKLNADSPAPNKYMDFAVYLTKDIESNL 136

BLAST of CmoCh14G008570 vs. NCBI nr
Match: gi|659114440|ref|XP_008457055.1| (PREDICTED: MLP-like protein 34 [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 9.1e-26
Identity = 61/108 (56.48%), Postives = 79/108 (73.15%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           +++        S++     +G P E K R+AIDDANKSITF+  EGD LRDFEV ++K +
Sbjct: 44  KVVEGNGYSHGSIIHLKYNAGRPEEMKERLAIDDANKSITFECLEGDALRDFEVLKLKFQ 103

Query: 63  VVENGSNGS----SVEYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V ENG+NG     S+E+VKANEDVA PH+YLLCV+KV+KGLD+YLCNN
Sbjct: 104 VFENGNNGGTVNWSIEFVKANEDVASPHHYLLCVSKVAKGLDDYLCNN 151

BLAST of CmoCh14G008570 vs. NCBI nr
Match: gi|449464138|ref|XP_004149786.1| (PREDICTED: kirola [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           +++        S++     +G P E K R+AIDDANKSITF+  EGD LR+FEV ++K +
Sbjct: 44  KVVEGNGFSDGSIIHLKFNAGKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQ 103

Query: 63  VVENGSNGS----SVEYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V+ENG+NG     S+E+VKANEDVA PH+YLLCV KV+KGLD+YLCNN
Sbjct: 104 VLENGNNGGTVNWSIEFVKANEDVASPHHYLLCVTKVAKGLDDYLCNN 151

BLAST of CmoCh14G008570 vs. NCBI nr
Match: gi|778680249|ref|XP_011651277.1| (PREDICTED: major latex protein 146-like [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           ++L       +SV+      G P E K R+A DDANKSI F+  EGD+LRDFEVF+MK++
Sbjct: 43  KILEGNGFAHASVIHIKYNIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQ 102

Query: 63  V-VENGSNGS----SVEYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V  E GSNGS    S+E+VKANEDVA PH YL   A+ SK LD+YLCNN
Sbjct: 103 VNNEKGSNGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 151

BLAST of CmoCh14G008570 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-21
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           ++L        SV+      G P E K R+A DDANKSI F+  EGD+ RDFEVF+MK++
Sbjct: 43  KILEGNGFAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQ 102

Query: 63  VV-ENGSNGSSV----EYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V+ E GSNGSSV    E+VK NEDVA PH+YL   A+ SK LD+YLCNN
Sbjct: 103 VINEKGSNGSSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 151

BLAST of CmoCh14G008570 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-21
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 1

Query: 3   RLLRSRSLCSSSVVVTSSTSGSPREAKTRVAIDDANKSITFQYREGDVLRDFEVFQMKIE 62
           ++L        SV+      G P E K R+A DDANKSI F+  EGD+ RDFEVF+MK++
Sbjct: 57  KILEGNGFAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQ 116

Query: 63  VV-ENGSNGSSV----EYVKANEDVAPPHNYLLCVAKVSKGLDEYLCNN 107
           V+ E GSNGSSV    E+VK NEDVA PH+YL   A+ SK LD+YLCNN
Sbjct: 117 VINEKGSNGSSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MLP31_ARATH4.7e-0637.08MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LCM8_CUCSA1.1e-2555.56Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1[more]
A0A0A0L9D7_CUCSA9.4e-2255.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1[more]
A0A0A0LA22_CUCSA1.6e-2154.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1[more]
A0A0A0L7P3_CUCSA1.1e-1755.81Uncharacterized protein OS=Cucumis sativus GN=Csa_3G334350 PE=4 SV=1[more]
A0A0A0L771_CUCSA5.9e-1650.56Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G70840.12.6e-0737.08 MLP-like protein 31[more]
AT1G23120.11.3e-0630.59 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT1G70870.18.5e-0630.93 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659114440|ref|XP_008457055.1|9.1e-2656.48PREDICTED: MLP-like protein 34 [Cucumis melo][more]
gi|449464138|ref|XP_004149786.1|1.5e-2555.56PREDICTED: kirola [Cucumis sativus][more]
gi|778680249|ref|XP_011651277.1|1.4e-2155.05PREDICTED: major latex protein 146-like [Cucumis sativus][more]
gi|778680829|ref|XP_004151203.2|2.3e-2154.13PREDICTED: major latex protein 149-like [Cucumis sativus][more]
gi|700202691|gb|KGN57824.1|2.3e-2154.13hypothetical protein Csa_3G331340 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000916Bet_v_I/MLP
IPR023393START-like_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
GO:0009607response to biotic stimulus
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G008570.1CmoCh14G008570.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000916Bet v I/Major latex proteinPFAMPF00407Bet_v_1coord: 21..105
score: 5.9
IPR000916Bet v I/Major latex proteinSMARTSM01037Bet_v_1_2coord: 14..106
score: 8.
IPR023393START-like domainGENE3DG3DSA:3.30.530.20coord: 27..106
score: 7.9
NoneNo IPR availablePANTHERPTHR31338FAMILY NOT NAMEDcoord: 13..106
score: 5.1
NoneNo IPR availablePANTHERPTHR31338:SF16POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 13..106
score: 5.1
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 28..105
score: 1.52

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G008570Csa3G321300Cucumber (Chinese Long) v2cmocuB229
CmoCh14G008570ClCG05G011140Watermelon (Charleston Gray)cmowcgB220
CmoCh14G008570CSPI03G21670Wild cucumber (PI 183967)cmocpiB232
CmoCh14G008570MELO3C020273.2Melon (DHL92) v3.6.1cmomedB261
The following gene(s) are paralogous to this gene:

None