CmoCh14G006180 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G006180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionThioredoxin h
LocationCmo_Chr14 : 3116941 .. 3119259 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTCGTCTGGCAAAGTCTACGCCGACGCATCAATTTTTCTTGCGTACGGAGAAAAATGGGAGTCCTTCTATCGAAGATCGGAGCTCTTCTTTCAAACTGGTTCGGCCCCTCGACGGCGAGGGCCGAAGATGCGTCGTCGGAGCCGTCTTCCGTGTTGTCTTTTCACTCCTCAGCTAGATGGCAACTCCACTTCAATTCCGCTAAGGAATCCTCCAAGCTCGTAAGTCTCTATTTTACTATTTCAATTGCCAGTTGTTGGATCAAAGGGATTTTTTCTAGGGTTACTGTTGTCAATTCGATTGCTGATCTGATCTCTTTCTCTTCCTTGAATTTGTTGGATTGTGGGAGAGTAGATGGTGATTGATTTCTCCGCGACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCCAGCAAATACACCGATGTTGAGTTCGTCAAAATCGATGTAGATGAGCTATCTGTACGCCTTTCTCCTTCTCTCAATTTTGCTTCCTCTTATTTCTGTGTCAGAATCTTAACCGCGATTGTAGTCATAAATTTTGTTGCTAATGTTAGGGCGTTTTTTCAGTTTAGTGCATGAATTTAAAACCATTTCTTTCATCTTCAAAATCAATTTAAAACATCTCTTTTATGTTAGTAATGCTGATATTGTCCACTTTGATCATAAGTTCTGACTTGACTTTTTGTTTCCCCAAGAGACCTCGTACTAGTATTCCTTACTTATAAACCCATGATCAACCCCTTAATTAGCCGATGTAGGACTCCTCTCCCAACAATCCTCCCCTTGAACAAAGTAAATTATAGAGCCTCCTTTGAGGCTTAGGGAGCCCTTGAACAACCTCCCCTTAATCTCGATTCTCTGGAGTCCTCGAACAAATTACACCCTTTGTTTGACACTTAAGCCACTTGACTACACCTTCGAAGCTTGCAACTTTTTTGTTTGACATTCGAAGATTCTATTGATATGGCGAAGTTAAGGGCATGACTCTGATATTATGTTAGGAATCACGAACCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTTATCACTTTGATTTTGGTTTCCACAAAAGGCCTCATACCAATGGAGATAGTATTTCTTATTTATAAACCCATGATCAACCCCTTAATTAGCTGATGTGGGACTCCCCAACCATCCCCAACACTCTAATCATTAAAATTTAATTTATGTTTAATTTTATATTTTTAAATGTGATTTTCAAATCATTAAAATTTATTATGAATCGTGTGAAACATGCCTTTAGTCTTTGTTGTTTTCATTCTAACTTTATGTTGTCCAATAAATGCTTAGTGAGTTAGTATAAGTTTCAAAGAGATATTAGGCATGTAGGAGAGTAAACATTTGCAATTTCTACCCATTTCTTACAAATTTGGAAGAGAAATGAGAAAATTTCTTCCCTTATCGCGTAGGTTTATCATAAGCTAATATTAATATTGACTTACGGAAATGATATAGTCGAAAAATGTTAAAACATGCAAACATGGTCATAGCTATTCTCACCAAAAGGTACCTCTAGTCTCACATGTTCTTGTTCGACAAACGAAATTTTTTCAAATGTAGGGACTAAATTGAAACATTTTAAACAACAAGAGTAGATTGAAAATAGAAAATACACCAATATTAGGGACTAAAACATACATTTAGCTAGAATTTAATTGCAAGATTGACAAGATTGTTCGTGAAATCAGGATGTGGCTCAGGAATTTGGAGTACAAGCTATGCCCACATTTATGTTGCTGAGGAGAGGGAAAGTGGTGGATACAGTGGTTGGAGCCCGCAAAGAAGAGCTGGAGAAGAAGATTCAAAAGCACAGATGAGCATCTGGTTGAACTTTAATCCAAAAACCCCCAACAATAAGTCCTCTCACTCTCACACTTCTTCCTCTCCTTTATGTAGACATTTGAAAGTTATCTATTTTCTAACTTGGTCAGCTATTTGAATGTTAAACTCCATCCTCAATCTATCCATCTTCTCTGTTCTGTAAGGCATACCCATTGTTTGCCTTTAGTTGGTGAAGTGCTTAAAAGCCCAACAGTTTTAGGATGTTTTCTTGCAAACAGCTCAAGTTCTGAAGCTGACTTGAACTTTGTTATCTGTGTGAAACAAATCTTGATAGTATAATGCTTAGTTAAGACAATTTCTATGATCTGTAAGAACCGTGTGCTGCTCCTCTTCTTCATCTTCTTCCTTTTTTTCAGTGTCTTTGCTATTATAATAGCATTTGTTGTGGCCTTCCTCTATGGGAATGCAAATATTTGCTTGTGAATGC

mRNA sequence

CATTCGTCTGGCAAAGTCTACGCCGACGCATCAATTTTTCTTGCGTACGGAGAAAAATGGGAGTCCTTCTATCGAAGATCGGAGCTCTTCTTTCAAACTGGTTCGGCCCCTCGACGGCGAGGGCCGAAGATGCGTCGTCGGAGCCGTCTTCCGTGTTGTCTTTTCACTCCTCAGCTAGATGGCAACTCCACTTCAATTCCGCTAAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCCGCGACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCCAGCAAATACACCGATGTTGAGTTCGTCAAAATCGATGTAGATGAGCTATCTGATGTGGCTCAGGAATTTGGAGTACAAGCTATGCCCACATTTATGTTGCTGAGGAGAGGGAAAGTGGTGGATACAGTGGTTGGAGCCCGCAAAGAAGAGCTGGAGAAGAAGATTCAAAAGCACAGATGAGCATCTGGTTGAACTTTAATCCAAAAACCCCCAACAATAAGTCCTCTCACTCTCACACTTCTTCCTCTCCTTTATGTAGACATTTGAAAGTTATCTATTTTCTAACTTGGTCAGCTATTTGAATGTTAAACTCCATCCTCAATCTATCCATCTTCTCTGTTCTGTAAGGCATACCCATTGTTTGCCTTTAGTTGGTGAAGTGCTTAAAAGCCCAACAGTTTTAGGATGTTTTCTTGCAAACAGCTCAAGTTCTGAAGCTGACTTGAACTTTGTTATCTGTGTGAAACAAATCTTGATAGTATAATGCTTAGTTAAGACAATTTCTATGATCTGTAAGAACCGTGTGCTGCTCCTCTTCTTCATCTTCTTCCTTTTTTTCAGTGTCTTTGCTATTATAATAGCATTTGTTGTGGCCTTCCTCTATGGGAATGCAAATATTTGCTTGTGAATGC

Coding sequence (CDS)

ATGGGAGTCCTTCTATCGAAGATCGGAGCTCTTCTTTCAAACTGGTTCGGCCCCTCGACGGCGAGGGCCGAAGATGCGTCGTCGGAGCCGTCTTCCGTGTTGTCTTTTCACTCCTCAGCTAGATGGCAACTCCACTTCAATTCCGCTAAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCCGCGACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCCAGCAAATACACCGATGTTGAGTTCGTCAAAATCGATGTAGATGAGCTATCTGATGTGGCTCAGGAATTTGGAGTACAAGCTATGCCCACATTTATGTTGCTGAGGAGAGGGAAAGTGGTGGATACAGTGGTTGGAGCCCGCAAAGAAGAGCTGGAGAAGAAGATTCAAAAGCACAGATGA
Homology
[Close]
BLAST of CmoCh14G006180 vs. Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-41
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 1 

Query: 8   IGALLSNWFGPST-ARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCG 67
           +G  LS  FG    A A    SEPS VL F SSARWQLHFN  KES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGAR 127
           PCR++EP+ +AMA K+ DV+FVK+DVDEL DVA+EF V AMPTF+L++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHR 139
           K+ELEKK+ K R
Sbjct: 121 KDELEKKVSKLR 132

[Close]
BLAST of CmoCh14G006180 vs. Swiss-Prot
Match: TRH22_ORYSJ (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-28
Identity = 65/128 (50.78%), Postives = 92/128 (71.88%), Query Frame = 1 

Query: 8   IGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKES-SKLMVIDFSATWCG 67
           +G+  S  F P  A A+D     S V++ HS+A W   + + K + +KL+VIDFSATWCG
Sbjct: 1   MGSFFSTMFTPPPA-ADDGGD--SRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCG 60

Query: 68  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGAR 127
           PCR +EP+F  MA ++ D  F KIDVDELS+VA+++ V+AMPTF+L++ GK V  VVGA+
Sbjct: 61  PCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAK 120

Query: 128 KEELEKKI 135
           K+ELE+K+
Sbjct: 121 KDELERKV 125

[Close]
BLAST of CmoCh14G006180 vs. Swiss-Prot
Match: TRH21_ORYSJ (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 62/123 (50.41%), Postives = 92/123 (74.80%), Query Frame = 1 

Query: 19  STARAEDASSEP---SSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSF 78
           ST++ + A+ E    S+V++ HS A+W   +++ K ++KL+VIDFSA+WCGPC++MEP F
Sbjct: 6   STSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVF 65

Query: 79  NAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQ 138
             MA ++TDV F+K+DVDEL++VA+ + V+AMPTF+L R G+ V  +VGA K+ELEK I 
Sbjct: 66  KEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTIN 125

[Close]
BLAST of CmoCh14G006180 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-27
Identity = 57/112 (50.89%), Postives = 83/112 (74.11%), Query Frame = 1 

Query: 27  SSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSFNAMASKY-TDV 86
           ++E   V+  H++  W +  + AKES+KL+VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA+EFGV+AMPTF+ ++ G+VVD +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]
BLAST of CmoCh14G006180 vs. Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 58/112 (51.79%), Postives = 81/112 (72.32%), Query Frame = 1 

Query: 27  SSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSFNAMASKY-TDV 86
           ++E   V+  H    W +  ++AK+S+KL+VIDF+A+WC PCR++ P F  +A K+ +  
Sbjct: 2   AAEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQKH 138
            F K+DVDEL +VAQEFGV+AMPTF+L++ G VVD VVGARKE+L   I KH
Sbjct: 62  IFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113

[Close]
BLAST of CmoCh14G006180 vs. TrEMBL
Match: A0A0A0LHT3_CUCSA (Thioredoxin h OS=Cucumis sativus GN=Csa_3G827380 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.6e-61
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 1 

Query: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60
           MGVLLS+IGALLSNWFGP TA AE ASS+ SSV SFHSSARWQLHFNS +E+ KLMV+DF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDELSDVAQ FGVQAMPTF+ L+RGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKI+KHR
Sbjct: 121 TVVGARKEELEKKIEKHR 138

[Close]
BLAST of CmoCh14G006180 vs. TrEMBL
Match: B9IJS4_POPTR (Thioredoxin family protein OS=Populus trichocarpa GN=POPTR_0017s11310g PE=4 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-45
Identity = 91/138 (65.94%), Postives = 115/138 (83.33%), Query Frame = 1 

Query: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60
           MG +LS IG++LS  FG S A  + AS   S V +FHSSARWQLHFNS K +++LMVIDF
Sbjct: 1   MGAVLSSIGSILSYLFGASAAGEDSASDGQSGVTAFHSSARWQLHFNSIKNTNQLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120
           +A+WCGPC+ MEP+ +AMA+K+TDV+F KIDVDEL DVAQEFGVQAMPTF+L+++G  VD
Sbjct: 61  AASWCGPCKHMEPAVHAMAAKFTDVQFAKIDVDELPDVAQEFGVQAMPTFVLVKKGNEVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
            VVGA+KEEL++KI+KHR
Sbjct: 121 RVVGAQKEELQRKIEKHR 138

[Close]
BLAST of CmoCh14G006180 vs. TrEMBL
Match: Q4U0W0_NICAL (Thioredoxin H OS=Nicotiana alata GN=Trxh PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-45
Identity = 92/135 (68.15%), Postives = 115/135 (85.19%), Query Frame = 1 

Query: 8   IGALLSNWFGPSTARAEDA----SSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSAT 67
           +G+ LS+  G   A A +A    SSEPS V++FHSS RWQLHFNS+K+ +KL+V+DF+AT
Sbjct: 1   MGSYLSSLLGGGAAEAAEAESGSSSEPSRVIAFHSSNRWQLHFNSSKQLNKLIVVDFAAT 60

Query: 68  WCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVV 127
           WCGPC++MEP  NAM++KYTDV+FVKIDVDELSDVAQEFGVQAMPTF+LL++GK V+ VV
Sbjct: 61  WCGPCKMMEPVINAMSAKYTDVDFVKIDVDELSDVAQEFGVQAMPTFLLLKQGKEVERVV 120

Query: 128 GARKEELEKKIQKHR 139
           GA+K+ELEKKI KHR
Sbjct: 121 GAKKDELEKKILKHR 135

[Close]
BLAST of CmoCh14G006180 vs. TrEMBL
Match: A0A067LAN2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09716 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44
Identity = 89/131 (67.94%), Postives = 110/131 (83.97%), Query Frame = 1 

Query: 8   IGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGP 67
           +G+L S   G S A AED S++ S V +FHS  RWQLHFNS K+SS+LMVIDF+A+WCGP
Sbjct: 1   MGSLFSALAGDSAAAAEDNSADHSGVTTFHSPERWQLHFNSVKDSSQLMVIDFAASWCGP 60

Query: 68  CRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARK 127
           C+LMEP    MA K+TDV+FVKIDVDELSDVAQEFGVQAMPTF+L+++GK VD +VGARK
Sbjct: 61  CKLMEPEVKGMAVKFTDVQFVKIDVDELSDVAQEFGVQAMPTFVLVKKGKEVDRIVGARK 120

Query: 128 EELEKKIQKHR 139
           +EL++KI+KHR
Sbjct: 121 DELQRKIEKHR 131

[Close]
BLAST of CmoCh14G006180 vs. TrEMBL
Match: M5WTK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011576mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-44
Identity = 90/132 (68.18%), Postives = 114/132 (86.36%), Query Frame = 1 

Query: 7   KIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCG 66
           ++G+ LS+  G S A    ASSE S V SFHSSARWQLHFNS K+SS+L+VIDFSA+WCG
Sbjct: 72  RMGSFLSSLLGGSPAYDSAASSEDSRVTSFHSSARWQLHFNSHKDSSQLLVIDFSASWCG 131

Query: 67  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGAR 126
           PCRL+EP+ + M++++TDV+F KIDVDELS+VAQEFGVQAMPTF+LL++GK VD V+GAR
Sbjct: 132 PCRLIEPAVHYMSTQFTDVDFAKIDVDELSEVAQEFGVQAMPTFVLLKKGKEVDRVIGAR 191

Query: 127 KEELEKKIQKHR 139
           K+ELEKKIQK++
Sbjct: 192 KDELEKKIQKYQ 203

[Close]
BLAST of CmoCh14G006180 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 170.2 bits (430), Expect = 8.6e-43
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 1 

Query: 8   IGALLSNWFGPST-ARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCG 67
           +G  LS  FG    A A    SEPS VL F SSARWQLHFN  KES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGAR 127
           PCR++EP+ +AMA K+ DV+FVK+DVDEL DVA+EF V AMPTF+L++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHR 139
           K+ELEKK+ K R
Sbjct: 121 KDELEKKVSKLR 132

[Close]
BLAST of CmoCh14G006180 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28
Identity = 57/112 (50.89%), Postives = 83/112 (74.11%), Query Frame = 1 

Query: 27  SSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSFNAMASKY-TDV 86
           ++E   V+  H++  W +  + AKES+KL+VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA+EFGV+AMPTF+ ++ G+VVD +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]
BLAST of CmoCh14G006180 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-27
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 1 

Query: 33  VLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVEFVKIDV 92
           V++ H+   W      A ES KL+VIDF+A+WC PCR + P F  MA K+T+V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 93  DELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQKH 138
           DEL  VAQEF V+AMPTF+ ++ G ++D VVGA K+E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of CmoCh14G006180 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 119.0 bits (297), Expect = 2.3e-27
Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 1 

Query: 27  SSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVE 86
           +SE   V++ H+   W      A ES  L+V+DF+A+WCGPCR + P F  +A K  +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA ++ +QAMPTFM L+ GK++D VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]
BLAST of CmoCh14G006180 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-27
Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 1 

Query: 33  VLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVEFVKIDV 92
           V++ H+   W     +A ES KL+VIDF+ATWC PCR + P F  +A K+ DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 93  DELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARKEELEKKIQKHR 139
           DEL+ VA+EF VQAMPTF+ ++ G++ +TVVGA KEE+   ++KH+
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHK 112

[Close]
BLAST of CmoCh14G006180 vs. NCBI nr
Match: gi|659085467|ref|XP_008443435.1| (PREDICTED: thioredoxin H2 [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 9.3e-63
Identity = 122/138 (88.41%), Postives = 130/138 (94.20%), Query Frame = 1 

Query: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60
           MGVLLS+IGALLSNWFGP TA AE ASSEPSSV SFHSSARWQLHFNS +E+SKLMVIDF
Sbjct: 29  MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 88

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDEL+DVAQ FGVQAMPTF+ L+RGKVVD
Sbjct: 89  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 148

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKI+KHR
Sbjct: 149 TVVGARKEELEKKIEKHR 166

[Close]
BLAST of CmoCh14G006180 vs. NCBI nr
Match: gi|449459458|ref|XP_004147463.1| (PREDICTED: thioredoxin H2 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 6.6e-61
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 1 

Query: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60
           MGVLLS+IGALLSNWFGP TA AE ASS+ SSV SFHSSARWQLHFNS +E+ KLMV+DF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDELSDVAQ FGVQAMPTF+ L+RGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKI+KHR
Sbjct: 121 TVVGARKEELEKKIEKHR 138

[Close]
BLAST of CmoCh14G006180 vs. NCBI nr
Match: gi|566212725|ref|XP_002324032.2| (thioredoxin family protein [Populus trichocarpa])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 91/138 (65.94%), Postives = 115/138 (83.33%), Query Frame = 1 

Query: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60
           MG +LS IG++LS  FG S A  + AS   S V +FHSSARWQLHFNS K +++LMVIDF
Sbjct: 1   MGAVLSSIGSILSYLFGASAAGEDSASDGQSGVTAFHSSARWQLHFNSIKNTNQLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120
           +A+WCGPC+ MEP+ +AMA+K+TDV+F KIDVDEL DVAQEFGVQAMPTF+L+++G  VD
Sbjct: 61  AASWCGPCKHMEPAVHAMAAKFTDVQFAKIDVDELPDVAQEFGVQAMPTFVLVKKGNEVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
            VVGA+KEEL++KI+KHR
Sbjct: 121 RVVGAQKEELQRKIEKHR 138

[Close]
BLAST of CmoCh14G006180 vs. NCBI nr
Match: gi|1009182224|ref|XP_015872595.1| (PREDICTED: thioredoxin H2 [Ziziphus jujuba])

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-45
Identity = 91/131 (69.47%), Postives = 110/131 (83.97%), Query Frame = 1 

Query: 8   IGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSATWCGP 67
           +G +LS+  G   A    +SSEPS V SFHSS RWQLHFN  KES+KL+VIDFS TWCGP
Sbjct: 1   MGGILSSLLGGPAAAEAASSSEPSQVRSFHSSERWQLHFNEVKESNKLVVIDFSVTWCGP 60

Query: 68  CRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVVGARK 127
           C+LME  FNA++SK+TDV+FVKIDVDELS VAQEFGVQAMPTF+L+++GK VD ++GA+K
Sbjct: 61  CKLMEQIFNALSSKFTDVDFVKIDVDELSKVAQEFGVQAMPTFVLVKKGKEVDRLIGAKK 120

Query: 128 EELEKKIQKHR 139
           EELEKKI+KHR
Sbjct: 121 EELEKKIEKHR 131

[Close]
BLAST of CmoCh14G006180 vs. NCBI nr
Match: gi|66096352|gb|AAY42864.1| (thioredoxin H [Nicotiana alata])

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-45
Identity = 92/135 (68.15%), Postives = 115/135 (85.19%), Query Frame = 1 

Query: 8   IGALLSNWFGPSTARAEDA----SSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDFSAT 67
           +G+ LS+  G   A A +A    SSEPS V++FHSS RWQLHFNS+K+ +KL+V+DF+AT
Sbjct: 1   MGSYLSSLLGGGAAEAAEAESGSSSEPSRVIAFHSSNRWQLHFNSSKQLNKLIVVDFAAT 60

Query: 68  WCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVDTVV 127
           WCGPC++MEP  NAM++KYTDV+FVKIDVDELSDVAQEFGVQAMPTF+LL++GK V+ VV
Sbjct: 61  WCGPCKMMEPVINAMSAKYTDVDFVKIDVDELSDVAQEFGVQAMPTFLLLKQGKEVERVV 120

Query: 128 GARKEELEKKIQKHR 139
           GA+K+ELEKKI KHR
Sbjct: 121 GAKKDELEKKILKHR 135

The following BLAST results are available for this feature:
BLAST of CmoCh14G006180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH2_ARATH1.5e-4161.36Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2[more]
TRH22_ORYSJ1.5e-2850.78Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700 PE=2 SV=1[more]
TRH21_ORYSJ1.9e-2850.41Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800 PE=2 SV=1[more]
TRXH4_ARATH2.2e-2750.89Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2[more]
TRXH2_BRANA1.1e-2651.79Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1[more]
BLAST of CmoCh14G006180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHT3_CUCSA4.6e-6186.23Thioredoxin h OS=Cucumis sativus GN=Csa_3G827380 PE=4 SV=1[more]
B9IJS4_POPTR1.2e-4565.94Thioredoxin family protein OS=Populus trichocarpa GN=POPTR_0017s11310g PE=4 SV=2[more]
Q4U0W0_NICAL2.1e-4568.15Thioredoxin H OS=Nicotiana alata GN=Trxh PE=2 SV=1[more]
A0A067LAN2_JATCU1.4e-4467.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09716 PE=4 SV=1[more]
M5WTK4_PRUPE2.3e-4468.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011576mg PE=4 SV=1[more]
BLAST of CmoCh14G006180 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G39950.18.6e-4361.36 thioredoxin 2[more]
AT1G19730.11.2e-2850.89 Thioredoxin superfamily protein[more]
AT1G45145.11.0e-2752.38 thioredoxin H-type 5[more]
AT3G51030.12.3e-2747.75 thioredoxin H-type 1[more]
AT5G42980.13.9e-2750.94 thioredoxin 3[more]
BLAST of CmoCh14G006180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085467|ref|XP_008443435.1|9.3e-6388.41PREDICTED: thioredoxin H2 [Cucumis melo][more]
gi|449459458|ref|XP_004147463.1|6.6e-6186.23PREDICTED: thioredoxin H2 [Cucumis sativus][more]
gi|566212725|ref|XP_002324032.2|1.8e-4565.94thioredoxin family protein [Populus trichocarpa][more]
gi|1009182224|ref|XP_015872595.1|2.3e-4569.47PREDICTED: thioredoxin H2 [Ziziphus jujuba][more]
gi|66096352|gb|AAY42864.1|3.0e-4568.15thioredoxin H [Nicotiana alata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0000280 nuclear division
biological_process GO:0007000 nucleolus organization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000103 sulfate assimilation
biological_process GO:0034599 cellular response to oxidative stress
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0004791 thioredoxin-disulfide reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G006180.1CmoCh14G006180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 1..137
score: 3.2
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 22..137
score: 1.9
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 31..137
score: 8.88
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 49..137
score: 4.2
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 17..138
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 57..75
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 64..73
score: 1.3E-6coord: 103..114
score: 1.3E-6coord: 56..64
score: 1.
NoneNo IPR availablePANTHERPTHR10438:SF243THIOREDOXIN H2coord: 1..137
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G006180Cucsa.339110Cucumber (Gy14) v1cgycmoB0926
CmoCh14G006180CmaCh11G010430Cucurbita maxima (Rimu)cmacmoB130
CmoCh14G006180CmaCh14G006070Cucurbita maxima (Rimu)cmacmoB244
CmoCh14G006180Cla010144Watermelon (97103) v1cmowmB230
CmoCh14G006180Cla017030Watermelon (97103) v1cmowmB214
CmoCh14G006180Csa3G827380Cucumber (Chinese Long) v2cmocuB226
CmoCh14G006180MELO3C009894Melon (DHL92) v3.5.1cmomeB215
CmoCh14G006180ClCG05G024700Watermelon (Charleston Gray)cmowcgB218
CmoCh14G006180ClCG10G014800Watermelon (Charleston Gray)cmowcgB207
CmoCh14G006180CSPI03G39260Wild cucumber (PI 183967)cmocpiB229
CmoCh14G006180Lsi03G014570Bottle gourd (USVL1VR-Ls)cmolsiB230
CmoCh14G006180Cp4.1LG03g07860Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G006180MELO3C009894.2Melon (DHL92) v3.6.1cmomedB244
CmoCh14G006180CsaV3_3G041740Cucumber (Chinese Long) v3cmocucB0270
CmoCh14G006180Cla97C10G197690Watermelon (97103) v2cmowmbB230
CmoCh14G006180Bhi11G002527Wax gourdcmowgoB0281
CmoCh14G006180CsGy3G036850Cucumber (Gy14) v2cgybcmoB279
CmoCh14G006180Carg09769Silver-seed gourdcarcmoB0592
CmoCh14G006180Carg22909Silver-seed gourdcarcmoB0298
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh14G006180CmoCh11G010660Cucurbita moschata (Rifu)cmocmoB091
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G006180Wax gourdcmowgoB0355
CmoCh14G006180Cucurbita moschata (Rifu)cmocmoB057
CmoCh14G006180Cucumber (Gy14) v1cgycmoB0204
CmoCh14G006180Cucumber (Gy14) v1cgycmoB0438
CmoCh14G006180Cucumber (Gy14) v1cgycmoB0586
CmoCh14G006180Wild cucumber (PI 183967)cmocpiB222
CmoCh14G006180Wild cucumber (PI 183967)cmocpiB225
CmoCh14G006180Wild cucumber (PI 183967)cmocpiB256
CmoCh14G006180Cucumber (Chinese Long) v2cmocuB219
CmoCh14G006180Cucumber (Chinese Long) v2cmocuB222
CmoCh14G006180Cucumber (Chinese Long) v2cmocuB252
CmoCh14G006180Melon (DHL92) v3.5.1cmomeB202
CmoCh14G006180Watermelon (Charleston Gray)cmowcgB200
CmoCh14G006180Watermelon (Charleston Gray)cmowcgB224
CmoCh14G006180Watermelon (97103) v1cmowmB206
CmoCh14G006180Watermelon (97103) v1cmowmB240
CmoCh14G006180Cucurbita pepo (Zucchini)cmocpeB249
CmoCh14G006180Bottle gourd (USVL1VR-Ls)cmolsiB224
CmoCh14G006180Bottle gourd (USVL1VR-Ls)cmolsiB240
CmoCh14G006180Melon (DHL92) v3.6.1cmomedB236
CmoCh14G006180Silver-seed gourdcarcmoB0360
CmoCh14G006180Cucumber (Chinese Long) v3cmocucB0260
CmoCh14G006180Cucumber (Chinese Long) v3cmocucB0261
CmoCh14G006180Cucumber (Chinese Long) v3cmocucB0300
CmoCh14G006180Watermelon (97103) v2cmowmbB247
CmoCh14G006180Watermelon (97103) v2cmowmbB260