CmoCh14G004990 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G004990
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Single-stranded nucleic acid binding R3H) (Single-stranded nucleic acid-binding protein R3H)
LocationCmo_Chr14 : 2475159 .. 2478701 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACCCCTTTCCCCTCCGCCTGGTGGGATAAGAAAGAGGGTTCTCTCTCTTTTTCCTTCTCCTCCTCCAGATGCTAAGAATTAAACCCTTTCCCTGTTTCTGCACCTTACCTCTTCCTATTCTTCTTCTCCTCCTCTGACACAGAAGGGGAAGAAGAAACCCTTTGAAGGAATCGAACAGTTTCAGAGTCTTGTGCGTTGAATCATAAACAGAGCTCTTTTCCATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCAGTGAGTTCTTTTGTTATTTCTTTCGTTTTTTTTTTAAGGGGTTGAATTGCCCAGTTGACCTAATCTTGAATCTGTTCTTGGGATCAATTGATTTCGATTTGCGAGTTTGTATTGGTTGATTTGGATTTGGATTTGGATTTGCTATAAGCTTGTAGTTGGGTTAGATCTGTTTTTCTCTTTGAGGTTCCTGTCTTTTTGTTTGTGGATGAAATCTGGATTTGGCCAAGAATCTTATGATTATGGGTTCATATTTCTTAAGAAATAGAATGATTTCATTGTAGAGATTATGGATTTACAAGAAATCAGATGAAATTTACCCAACCCACCAAGGGGATTACAGAAAATTCTCAATTGGCTATAATTTGTGTTCACTATGATGAACACACCAAATAGAAGAAAGCAGCCTGACTTGGTCCTTCTGTCTCGATGTTTCCATAAAACCATCACCATGGAGCACGACCGCAGAATTCTAGCGTTTTTTCGCCTAACCAGAAATGAGCTGTAAAAGGCTTCGGTGCAAGTCGTAGGCAAAACCCAACTGAGTTTGAAAGATTTAAACAATCTATACCAATATGAGACAGCAAATCGGCATTTAATGATATATTTGGTAGTTAGTAGGGATTTTTTTTGTGAGATCCCCACGTCGGTTGGGGAGGAGAACGGAACACCCTTTACAGGGGTGTGGAAACCTCTCCCTAGTAGATGTGTTTTAAAAACCTTGTAGGGAAGTTCGAAAGGGAAAGCCCAAAGAGGACGATATCTGTTAGCGGTGTGCTTGGGCCATTATAAATGGTATCAGAGCCAGATATCAGGCGGTGTGCTAGCGAGGACGGTGAGCCCCGAAGGGGGATGGACACGGAGCAATGTGCCAAGCCCCGGGGGGGGGGATTGTCAGATCCCTCGTCGGTTGGAGAGGGGAACAAGACATTGGGATTTCTTCATTTGAACATTGGTTTCTTTTAATAATGTGAATGATTTACATGTTAATTTACGGTTTCTTTTCAGTTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATGTTCGTGTATTTGGCCTTGTTTTTTGGTATCTTTATACACTGAATGTCTGTCTATTAAGCCTACGTCTATGTTATGCCAATGACTCTTTGTTGAAACAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGTACTTTTAATTAACGTACCTTTTCCGTTCGCTAAAGGTTGCAAGTATTGTTTGTCGAAAACCAAGAAAAAAGTTTGTCAATCCTTTTGCATTGTGGATGCTCGGCATTGTTTTTCGTTTGTTTATTCACGATTGATATGAGATGTAACAGCCTAACTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTGCTTCACCTTTCGAGTTTCCCCTCAAGGTTTTTAAAATGCGTATTTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTTTACTCCCCAATCAATGTGAGATCTTATGATAAAAGATAAGAAGCTTTGGCTCACATCGGTTGGGGAGGAGAAAGAAGCATTCTTTATATGGGTTTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAGATCCTTGAGGGAAAACCCGAAAGGGAAAGCCCAATGAGGACAATTTCTACTAGTGGTGGGGCTTGGGCTGTTACATGAGATCATAAAACTAGAGTTGAATAGTTCGGTTGATAATGTTGAAAGACGTTTTTAGAAAGCAATCGATATTTCACTGATAAGATGAGATAGGACGGAGAGATATGATTGAGGAGTTCCGTTGCACGAGGATGAAAGGTTTTCGTGGCACGCTAGGTTATGCTCTTGGGGGCTTTGGGAAGAAAGAAACATTAGAGTTTTTAGAGGGTTCGAGAGACTCTCGAGTTAGGTGTGGTCTCGTATTAGGTTCAATGTTTACTAACTGGCATTGATCTCGATGAACGTTCGGTTTAGTCTCGGCCAGAACTTGTAAATGATGAATAATTGTGAATGTTTTGAACTCTAATGGTAGCATCTGGTGGTATGTTATATTGCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAGAGATGTGATGATGATGATGAGGAGCTTAGGTGAAAAACACTTTACAATTAGATTTTGTTGTGTACTCTTGTTTGATTGACTGCTTGGAATCTCAGTTCTAGTTTTTGCATAACTTCTTATAACACTTTCTCTCATACTCCATTATGCCATTAGCTGCTATACAACACTCCTTAATAACATTTCTCCCATTCAACATTGATTTTCTTGGTATTTTCACACGTTCATCGGTCTCATAGCGACGTGAAGAGTGACTAAGATTAAAGTATAAACAGACTCG

mRNA sequence

TTACCCCTTTCCCCTCCGCCTGGTGGGATAAGAAAGAGGGTTCTCTCTCTTTTTCCTTCTCCTCCTCCAGATGCTAAGAATTAAACCCTTTCCCTGTTTCTGCACCTTACCTCTTCCTATTCTTCTTCTCCTCCTCTGACACAGAAGGGGAAGAAGAAACCCTTTGAAGGAATCGAACAGTTTCAGAGTCTTGTGCGTTGAATCATAAACAGAGCTCTTTTCCATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCATTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAGAGATGTGATGATGATGATGAGGAGCTTAGGTGAAAAACACTTTACAATTAGATTTTGTTGTGTACTCTTGTTTGATTGACTGCTTGGAATCTCAGTTCTAGTTTTTGCATAACTTCTTATAACACTTTCTCTCATACTCCATTATGCCATTAGCTGCTATACAACACTCCTTAATAACATTTCTCCCATTCAACATTGATTTTCTTGGTATTTTCACACGTTCATCGGTCTCATAGCGACGTGAAGAGTGACTAAGATTAAAGTATAAACAGACTCG

Coding sequence (CDS)

ATGGAATCGGCTTCCTTCGAACCAACCCCACAAGGGTTCAAGGACAAGGAGTCAATGGTTGATCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGTCATCGTCTTACCATTTTACGGATGGAACTTGACATCCAGAAGTTCTTGCATAATCCGGATCAGCAGCTCTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCATCGTGTTGCTCAACATTATGGCCTTCAAACCATGGTTCAGGACTCCGGCATTGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGGTGGAAAACAGACTCCCTTCTGTGCGGTTATCTGAAATACCTGCGAAGCAATTCGACAATGAGAAAAATGAGCAGGTCAAATTCGTCATCAGACCTCGGCCTAACAAAATGTCTGAAACTTCTGCCAATGATGGAGGTCTCAAACAAAATTCTGTCCGAAGCGTGGAAGAGAGAAAGGAGGAATACGATAGGGCACGAGCTCGAATCTTCAGCTCTCCAAGTAGTCCCGAGTTAGACGATACAACATCTCAATCCCCATCTGAAGGAAAATATGCATGCTCGAACAGGGATGAAACTGAAGGCTTTAGAACTTTGGCTGGTGATTTGGAAAAATTTAATGGCAGGGACGGCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCCGATTATGATCGCAACTATGATAGGTATATTAGGAACCTTCCAACCAATCAAAATTTAAGCTTGGCTCCCTTTACTATGCAAAAAATGCAGCCTCCATTTGTACAATGTGATATGGGTTACTCCCTCATGGGTCATATACCAGGAACTCAACCTTCACTTAGCTATGGGCCTCATCCGAGTCCTGTCGTAAGCCCTTTCTCCGCAATGGGTATGAACCGAACGTCTAGAGACGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCATTCTGCTTTTCAGGCCCCATTCTGCCAGCAACCCCTCAGCTTTGACTACTCTCAAAACCACCATTAG
Homology
[Close]
BLAST of CmoCh14G004990 vs. Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 1 

Query: 23  FLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQLFEFQHFP--TSYLRLAAHRVAQHYGL 82
           FLV  L+ NPR R+ +L++E +I  F+++ + Q   F+ FP  TSY R+  HRVA ++G+
Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM 216

Query: 83  QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIR------ 142
                D  +D  G  +++ KT   R+P  R SE       +EKN   Q +F+++      
Sbjct: 217 -----DHNVDQTGKAVIINKTSSTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASM 276

Query: 143 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFS 172
            R +        DG       +S+EER+EEY R R RIF+
Sbjct: 277 DRDDNQMRVPLQDG----RRSKSIEEREEEYQRVRERIFA 300

[Close]
BLAST of CmoCh14G004990 vs. Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 1 

Query: 23  FLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQLFEFQHFP--TSYLRLAAHRVAQHYGL 82
           FLV  L+ NPR R+ +L++E +I  F+++ + Q   F+ FP  TSY R+  HRVA ++G+
Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM 216

Query: 83  QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIR------ 142
                D  +D  G  +++ KT   R+P  R SE       +EKN   Q +F+++      
Sbjct: 217 -----DHNVDQTGKAVIINKTSNTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASM 276

Query: 143 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPE--LDDTTSQSPSEG 201
            R +        DG       +S+EER+EEY R R RIF+  +     L+D         
Sbjct: 277 DRDDNQIRVPLQDG----RRSKSIEEREEEYQRVRERIFARETGQNGYLNDIRGNREGLS 331

[Close]
BLAST of CmoCh14G004990 vs. Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 3.3e-11
Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 1 

Query: 23  FLVEALQN-PRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQT 82
           FLV  L+N PR R+ +L++E +I  F+ N +    +F    TSY R+  HRVA ++GL  
Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-- 215

Query: 83  MVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIRPRPNKMSE 142
              D  +D  G  ++V KT   R+P  + +E       ++K E  Q +++++ R N   +
Sbjct: 216 ---DHNVDQSGKSVIVNKTSNTRIPDQKFNE----HIKDDKGEDFQKRYILK-RDNSSFD 275

Query: 143 TSANDGGLK---QNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACSNR 202
              N   ++       +S+EER+EEY RAR RIFS  S    ++       + + A S +
Sbjct: 276 KDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQ 331

Query: 203 DETEGFR 204
              + FR
Sbjct: 336 QRRQIFR 331

[Close]
BLAST of CmoCh14G004990 vs. Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.8e-10
Identity = 50/159 (31.45%), Postives = 82/159 (51.57%), Query Frame = 1 

Query: 23  FLVEALQN-PRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQT 82
           FL+  L+N  R R+ +L+ME ++  F+ + +    +F    +SY R+  HRVA ++GL  
Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGL-- 210

Query: 83  MVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIRPRPNKMSE 142
              D  +D  G  +++ KT   R+P  R  E       +EK+E  Q +F+++ R N   +
Sbjct: 211 ---DHNVDQTGKSVIINKTSSTRIPEQRFCE----HLKDEKSEESQKRFILK-RDNSSID 270

Query: 143 TSANDGGLK----QNSVRSVEERKEEYDRARARIFSSPS 175
              N   +         +S+EER+EEY R R RIF+  S
Sbjct: 271 KEDNQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 298

[Close]
BLAST of CmoCh14G004990 vs. Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 6.1e-10
Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 1 

Query: 23  FLVEALQN-PRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGLQT 82
           FL+  L+N  R R+ +L+ME +I  F+ + +    +F    +SY R+  HRVA ++GL  
Sbjct: 152 FLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGL-- 211

Query: 83  MVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNE--QVKFVIRPRPNKMSE 142
              D  +D  G  +++ KT   R+P  R  E       +EK E  Q +F+++ R N   +
Sbjct: 212 ---DHNVDQTGKSVIINKTSSTRIPEQRFCE----HLKDEKGEESQKRFILK-RDNSSID 271

Query: 143 TSANDGGLKQNSV---------RSVEERKEEYDRARARIFSSPS 175
              N    +QN +         +S+EER+EEY R R RIF+  S
Sbjct: 272 KEDN----QQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 300

[Close]
BLAST of CmoCh14G004990 vs. TrEMBL
Match: A0A0A0LFE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G817720 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 1.0e-181
Identity = 320/354 (90.40%), Postives = 334/354 (94.35%), Query Frame = 1 

Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK  ENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMAENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVRSVEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRSVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ PSEGKYACSNRDETEG RTL G+LEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQIPSEGKYACSNRDETEGCRTLGGELEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPSPVVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKVQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           F AMG+N+ SRDASYEQWQSAAMMYAHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 301 FCAMGLNQASRDASYEQWQSAAMMYAHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]
BLAST of CmoCh14G004990 vs. TrEMBL
Match: B9S6G5_RICCO (R3h domain containing protein, putative OS=Ricinus communis GN=RCOM_0536310 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 6.6e-128
Identity = 241/345 (69.86%), Postives = 275/345 (79.71%), Query Frame = 1 

Query: 11  QGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAA 70
           Q   DKESMVDPFLVEALQNPRHRLTILRMELDIQ+FL NP QQ FEFQHFPTSYLRLAA
Sbjct: 5   QAITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRLAA 64

Query: 71  HRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVI 130
           HRVAQHYGL TMVQD+  DG  N+ILV+KT E R P+VRL EIPAKQ++++K+EQVK VI
Sbjct: 65  HRVAQHYGLITMVQDNSFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKSEQVKIVI 124

Query: 131 RPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGK 190
           RPRPNK S    N+ G+KQ+ VRSVEERKEEYDRARARIFSSPSS  LDD  SQ   + K
Sbjct: 125 RPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSIDRK 184

Query: 191 YACSNRDETEGFRTLAGDLEK-FNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLP 250
               ++DE E  R  A D EK  N RDG  SRVAIF+DREKDR+DPDYDR+YDRYIR+LP
Sbjct: 185 STNPSKDELENCRYSANDPEKNINPRDGAPSRVAIFRDREKDRTDPDYDRSYDRYIRSLP 244

Query: 251 TNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRT 310
           TNQ+ +LAP  MQK+Q PF+  D G+  +G +P TQ SLSY P  SPV+SPF A+G N+T
Sbjct: 245 TNQSFNLAPLNMQKIQLPFIPYDTGFPQLGQMPRTQNSLSYQPAASPVMSPFCAVGSNQT 304

Query: 311 SRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           SRD +Y QW SA+MMYAHSY Q RH+ FQAPFCQQPLSF+YSQNH
Sbjct: 305 SRDPAYVQWPSASMMYAHSYEQFRHAVFQAPFCQQPLSFEYSQNH 349

[Close]
BLAST of CmoCh14G004990 vs. TrEMBL
Match: A5AMT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00890 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.1e-127
Identity = 237/342 (69.30%), Postives = 278/342 (81.29%), Query Frame = 1 

Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           DKESMVDPFLVEALQNPRHRLTILRMELDIQ+FL NPDQQ FEFQHFPTSYLRLAAHRVA
Sbjct: 16  DKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLAAHRVA 75

Query: 75  QHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIRPRP 134
            HYGLQTMVQD+ +DG  NRI+V KT E+R P++ LSEIPAKQ +NEK E +K  IR RP
Sbjct: 76  LHYGLQTMVQDNSVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHIKIAIRRRP 135

Query: 135 NKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACS 194
           NK S    N+ G+K++SVR+VEERKEEYD+ARARIFS+P+SP+ DDT  Q+P++GK  C 
Sbjct: 136 NKTSLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTLPQAPADGKNLCL 195

Query: 195 NRDETEGFRTLAGDLEK-FNGRD-GMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQ 254
           N DE EG R    D EK  + RD G +SRVAIF+DREKDR+DPDYDR+Y+RY+RNLPTNQ
Sbjct: 196 NGDENEGCRNSMADPEKNISIRDSGTSSRVAIFRDREKDRTDPDYDRSYERYVRNLPTNQ 255

Query: 255 NLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRD 314
           + SLAPF  QK+Q PF+Q D G+  +G I  TQ SLSY P  +P+++PF AMG+N+TSRD
Sbjct: 256 SFSLAPFDAQKIQHPFLQYDTGFPQLGQIQRTQASLSYRP-SNPIMNPFCAMGLNQTSRD 315

Query: 315 ASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           A Y QW S +MMYAHSY Q RH+ FQAPFCQQPLSFDYSQNH
Sbjct: 316 AVYLQWPSHSMMYAHSYEQFRHAVFQAPFCQQPLSFDYSQNH 356

[Close]
BLAST of CmoCh14G004990 vs. TrEMBL
Match: A0A067JIX3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00069 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.1e-127
Identity = 239/342 (69.88%), Postives = 278/342 (81.29%), Query Frame = 1 

Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           +KESMVDPFLVEALQNPRHRLTILRMELDIQ+FL NPDQQ FEFQHFPTSYLRLAAHRVA
Sbjct: 11  EKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLAAHRVA 70

Query: 75  QHYGLQTMVQDSGIDGFGNRILVRKTV-ENRLPSVRLSEIPAKQFDNEKNEQVKFVIRPR 134
           QHYGL TMVQD+ IDG  N+ILV+KT  E+R P+VRLSEIPAKQ +++K E +K  IRPR
Sbjct: 71  QHYGLITMVQDNSIDGLTNKILVKKTTAESRYPAVRLSEIPAKQLESDKPEHLKIAIRPR 130

Query: 135 PNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYAC 194
           PN+ S   +N+ G+K++ VRSVEERKEEYDRARARIFSSPSSP  DDT SQ   + K A 
Sbjct: 131 PNRGSINESNEFGIKRSPVRSVEERKEEYDRARARIFSSPSSPNSDDTVSQGSIDRKSAS 190

Query: 195 SNRDETEGFRTLAGDLEKF-NGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQ 254
           S++DE +GFR  A D EKF   RDG  SRVAI +DREKDR+DPDYDR+Y+RYIR+LPTNQ
Sbjct: 191 SSKDEHQGFRNSATDQEKFIYTRDGAPSRVAILRDREKDRTDPDYDRSYERYIRSLPTNQ 250

Query: 255 NLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRD 314
           + +L PF MQK+Q PFVQ D G+  +G +P TQ +L Y P  SPV+SPF A+G N+TS D
Sbjct: 251 SFNLTPFHMQKIQLPFVQYDSGFPQLGQMPRTQSALGYRPAASPVMSPFCAVGSNQTSGD 310

Query: 315 ASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           A+Y QW SA+MMYAHSY Q RH+ FQ PFCQQPLSFDYSQNH
Sbjct: 311 AAYVQWPSASMMYAHSYEQFRHAVFQVPFCQQPLSFDYSQNH 352

[Close]
BLAST of CmoCh14G004990 vs. TrEMBL
Match: B9IHM5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03230g PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 6.8e-125
Identity = 236/350 (67.43%), Postives = 274/350 (78.29%), Query Frame = 1 

Query: 9   TPQG---FKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSY 68
           TPQ      +KESM+DPFLVEALQNPRHRLTILRMELDIQ+FL NPDQQ+FEF HFPTSY
Sbjct: 5   TPQAVAAINEKESMMDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQVFEFPHFPTSY 64

Query: 69  LRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQ 128
           LRLAAHRVAQHYGL TMVQD+GIDG  N+ILV+KT E R P+VRLSEIPAKQ  ++  E 
Sbjct: 65  LRLAAHRVAQHYGLITMVQDNGIDGLLNKILVQKTAECRYPAVRLSEIPAKQSGSDTPEM 124

Query: 129 VKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQS 188
           +K  IRPRPNK S    N  G+K++ VRSVEERKEEYDRARARIFSSPSSP  DDT  Q 
Sbjct: 125 IKLAIRPRPNKGSINDPNGFGIKRSPVRSVEERKEEYDRARARIFSSPSSPTADDTVPQL 184

Query: 189 PSEGKYACSNRDETEGFRTLAGDLEK-FNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRY 248
           P++ K   S++DE E  R    D EK    RDGM+SRVAIF+DREKDR+DPDYDR+Y+RY
Sbjct: 185 PTDSKNLSSSKDENEECRISVVDPEKNVFVRDGMSSRVAIFRDREKDRTDPDYDRSYERY 244

Query: 249 IRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAM 308
           +R+LP NQ+ SL PF MQK+  P++Q D  +  +G +P TQ SL Y P  +P +SPF AM
Sbjct: 245 VRSLPANQSFSLTPFNMQKIPIPYMQYDPSFPQLGQMPRTQASLGYHPAANPAMSPFCAM 304

Query: 309 GMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           G N+TSRDA+Y QW S AMMYAHSY+Q RH+ FQAPFCQQPLSFDYSQNH
Sbjct: 305 GSNQTSRDAAYVQWPSTAMMYAHSYDQFRHATFQAPFCQQPLSFDYSQNH 354

[Close]
BLAST of CmoCh14G004990 vs. TAIR10
Match: AT3G56680.1 (AT3G56680.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 335.1 bits (858), Expect = 5.2e-92
Identity = 186/337 (55.19%), Postives = 231/337 (68.55%), Query Frame = 1 

Query: 20  VDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVAQHYGL 79
           VDPFLVEAL N RHRLTILRMELD+Q+ L NP+QQ FEFQHFPTSYLRLAAHRVA HYGL
Sbjct: 24  VDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHRVANHYGL 83

Query: 80  QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIP-AKQFDNEKNEQVKFVIRPRPNKMS 139
            T VQ+SG DG  NRILV KT E++ P+VRLSEIP AKQ +N K E  K  I+ RP+K S
Sbjct: 84  ATAVQESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIKTRPSKGS 143

Query: 140 ETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACSNRDE 199
              A D    +  +RSVEERKEEYD+AR RIFS  +    DD++S++    + A  +RD+
Sbjct: 144 GYGAGDLEKNRGPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSETQVYERNASLSRDD 203

Query: 200 TEGFRTLAGDLEKFNG--RDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQNLSL 259
            +  +    +++K       G TSRVAIF+DREKDR DPDYDR + RYIR+LP NQN +L
Sbjct: 204 KQVSKNAYVEVKKNLSIRESGPTSRVAIFRDREKDRFDPDYDRRHQRYIRSLPVNQNFNL 263

Query: 260 APFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRDASYE 319
            PF +Q++  P+   +MG++    IP     L +GPHPS ++SP+       T+ DA Y 
Sbjct: 264 PPFNIQQIPTPYY--EMGFTGYNQIPSPPAPLGFGPHPSSIMSPYG------TTMDAMYM 323

Query: 320 QWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQN 354
            W +AAMMYAH Y Q R+ + QA F QQPLSFDY QN
Sbjct: 324 HWPNAAMMYAHPYEQFRNGSLQAQFVQQPLSFDYMQN 352

[Close]
BLAST of CmoCh14G004990 vs. TAIR10
Match: AT2G40960.1 (AT2G40960.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 318.2 bits (814), Expect = 6.6e-87
Identity = 184/343 (53.64%), Postives = 233/343 (67.93%), Query Frame = 1 

Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           DK   VDPFLVEALQNPRHRLTILRMELD+Q+FL +PDQQ FEFQHFPTSYLR AAHRVA
Sbjct: 16  DKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAAHRVA 75

Query: 75  QHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIRPRP 134
            HYGL T V+D G DG  +RI+V K+ ++R P+ RLSEIP KQ +  K E +K VI+PRP
Sbjct: 76  NHYGLITSVRDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMKVVIKPRP 135

Query: 135 NKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGKYACS 194
            K S    ++  LK   ++SVEERKE+YDRARARIF+   + + +D++S++        S
Sbjct: 136 TKGSGMEGDE--LKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNPWRVNCSS 195

Query: 195 NRDETEGFR--TLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPTNQ 254
           +RDE +  +   +  D    + +    SR+AI +DREKDR DPDYDR+  RYI NLP +Q
Sbjct: 196 SRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYISNLPVDQ 255

Query: 255 NLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRD 314
           NL +A F +Q M  P    DMG+   G+ P   PSL+ G H   V+SP    G+N+ SRD
Sbjct: 256 NLCVAHFNIQTMGTPIY--DMGF--RGYSPTAPPSLNLGQH--SVMSPCVTTGLNQPSRD 315

Query: 315 AS-YEQW-QSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQN 354
           A+ Y QW  +AA+MY HSY+  R+S FQA F  QPLSFDY QN
Sbjct: 316 AAMYMQWPNAAAVMYTHSYDHFRNSPFQAQFYPQPLSFDYMQN 350

[Close]
BLAST of CmoCh14G004990 vs. TAIR10
Match: AT3G10770.1 (AT3G10770.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 278.1 bits (710), Expect = 7.6e-75
Identity = 172/338 (50.89%), Postives = 212/338 (62.72%), Query Frame = 1 

Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           +KE+MVDPFLVEALQNPRHRLTILRMELDIQKF  NP+Q  FEF  FPTSYLRLAAHRVA
Sbjct: 6   EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVA 65

Query: 75  QHYGLQTMVQDSGI---DGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVIR 134
           QHYGL TM  D+G    DG  NRILV KT E+R P V LSEIP KQ +N + E  K  I+
Sbjct: 66  QHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIK 125

Query: 135 PRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPS--EG 194
           PRP + S    +  G++QN +RSVEERKEEYD+ARARIF+SPSS + +D++S  P   E 
Sbjct: 126 PRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEV 185

Query: 195 KYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLP 254
           +  C NR+ETE        ++      G TSRVAI +DREKDR DPDYDR+YDRY+ + P
Sbjct: 186 RNTCINRNETE-VAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSYDRYVVD-P 245

Query: 255 TNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIP-GTQPSLSYGPHPSPVVSPFSAMGMNR 314
             + + + P + Q   P  +          H+P G Q +L+YG   +P +SPF       
Sbjct: 246 AYRYVRVMP-SGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPF------- 305

Query: 315 TSRDASYEQW-QSAAMMYAHSYNQLRHSAFQAPFCQQP 346
           T   ASY  W  S  M YA   N    + ++ P    P
Sbjct: 306 THNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 333

[Close]
BLAST of CmoCh14G004990 vs. TAIR10
Match: AT5G05100.1 (AT5G05100.1 Single-stranded nucleic acid binding R3H protein)

HSP 1 Score: 272.7 bits (696), Expect = 3.2e-73
Identity = 174/342 (50.88%), Postives = 221/342 (64.62%), Query Frame = 1 

Query: 15  DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAAHRVA 74
           DKE+MVDPFLVEALQNPRHRLTILRMELDIQKF  +P+QQ +EFQ  PTSYLRL AHRVA
Sbjct: 6   DKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVA 65

Query: 75  QHYGL-QTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFD-NEKNEQVKFVIRP 134
           QHYGL  T ++  G+DG GNRIL  KTVE+R P V LSEIP KQ + + + E  K  I+P
Sbjct: 66  QHYGLFTTALEGGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKP 125

Query: 135 RPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSP------ 194
           RPN+ +  S +  G+++N +RSVEERKEEYD+ARARIF+SPSS + +D+++++P      
Sbjct: 126 RPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAPPPPYPR 185

Query: 195 --SEGKYACSNRDETE---GFRTLAGDLEKFNG--RD-GMTSRVAIFKDREKDRSDPDYD 254
             S+   AC +R+ETE    + +   D+E+ NG  RD G TSRVAI +DREKDR DPDYD
Sbjct: 186 LDSKHNTACPSRNETEVVVNYNSNPVDVER-NGVIRDSGRTSRVAIIRDREKDRYDPDYD 245

Query: 255 RNYDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVV 314
           RN  RY+R  P  QN +  P  +     PF       ++   +P TQ SL+YG HP    
Sbjct: 246 RN--RYVRVAPPVQNFNPIPIPL-----PFHD-----AIFPQMPRTQASLNYG-HP---- 305

Query: 315 SPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAP 341
                  +N      SY +W SA M YA + N      F+ P
Sbjct: 306 -------LNPAMTAPSYTEWPSATMTYAQTLNASDVHHFRHP 322

[Close]
BLAST of CmoCh14G004990 vs. TAIR10
Match: AT5G33406.1 (AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related)

HSP 1 Score: 65.9 bits (159), Expect = 5.9e-11
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 1 

Query: 281 IPGTQPSLSYGPHPSPVVSPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAP 340
           IP     L +GP PS  +SP+       T+ DA Y    +AAMMYAH Y QLR+   QA 
Sbjct: 423 IPSIPAPLGFGPPPSSTMSPYG------TTMDAMYMHLPNAAMMYAHPYEQLRNGPLQAQ 482

Query: 341 FCQQPLSFDYSQN 354
           F QQPLSFDY +N
Sbjct: 483 FVQQPLSFDYCRN 489

[Close]
BLAST of CmoCh14G004990 vs. NCBI nr
Match: gi|778685115|ref|XP_004136625.2| (PREDICTED: uncharacterized protein LOC101215817 isoform X1 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 1.5e-181
Identity = 320/354 (90.40%), Postives = 334/354 (94.35%), Query Frame = 1 

Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK  ENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMAENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVRSVEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRSVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ PSEGKYACSNRDETEG RTL G+LEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQIPSEGKYACSNRDETEGCRTLGGELEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPSPVVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKVQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           F AMG+N+ SRDASYEQWQSAAMMYAHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 301 FCAMGLNQASRDASYEQWQSAAMMYAHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]
BLAST of CmoCh14G004990 vs. NCBI nr
Match: gi|659085059|ref|XP_008443221.1| (PREDICTED: R3H domain-containing protein 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 640.2 bits (1650), Expect = 2.2e-180
Identity = 318/354 (89.83%), Postives = 335/354 (94.63%), Query Frame = 1 

Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFL+NPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLNNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK VENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMVENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVR+VEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRTVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ+PSEGKYACSNRDETEG RTL GDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQTPSEGKYACSNRDETEGCRTLGGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPS VVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKIQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSSVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           F AMG+N+ SRDASYEQWQ+AAMMYAHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 301 FCAMGLNQASRDASYEQWQNAAMMYAHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]
BLAST of CmoCh14G004990 vs. NCBI nr
Match: gi|778685118|ref|XP_011652165.1| (PREDICTED: uncharacterized protein LOC101215817 isoform X2 [Cucumis sativus])

HSP 1 Score: 609.4 bits (1570), Expect = 4.1e-171
Identity = 304/338 (89.94%), Postives = 318/338 (94.08%), Query Frame = 1 

Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK  ENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMAENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVRSVEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRSVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ PSEGKYACSNRDETEG RTL G+LEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQIPSEGKYACSNRDETEGCRTLGGELEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPSPVVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKVQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ 339
           F AMG+N+ SRDASYEQWQSAAMMYAHSYNQ RHSAFQ
Sbjct: 301 FCAMGLNQASRDASYEQWQSAAMMYAHSYNQFRHSAFQ 338

[Close]
BLAST of CmoCh14G004990 vs. NCBI nr
Match: gi|659085057|ref|XP_008443220.1| (PREDICTED: R3H domain-containing protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 605.5 bits (1560), Expect = 5.9e-170
Identity = 302/338 (89.35%), Postives = 319/338 (94.38%), Query Frame = 1 

Query: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60
           MESASF+PTPQGF DKESMVDPFLVEALQNPRHRLTILRMELDIQKFL+NPDQQLFEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLNNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK VENRLPSVRLSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMVENRLPSVRLSEIPAKQLDN 120

Query: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMS  SAN+GG KQ+SVR+VEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRTVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ+PSEGKYACSNRDETEG RTL GDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQTPSEGKYACSNRDETEGCRTLGGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300
           YDRYIRNLPTNQNLSLAPF M K+QPPFVQ D GYSL+GH+PGTQ S++YGPHPS VVSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKIQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSSVVSP 300

Query: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ 339
           F AMG+N+ SRDASYEQWQ+AAMMYAHSYNQ RHSAFQ
Sbjct: 301 FCAMGLNQASRDASYEQWQNAAMMYAHSYNQFRHSAFQ 338

[Close]
BLAST of CmoCh14G004990 vs. NCBI nr
Match: gi|255561144|ref|XP_002521584.1| (PREDICTED: R3H domain-containing protein 1 [Ricinus communis])

HSP 1 Score: 465.3 bits (1196), Expect = 9.5e-128
Identity = 241/345 (69.86%), Postives = 275/345 (79.71%), Query Frame = 1 

Query: 11  QGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQHFPTSYLRLAA 70
           Q   DKESMVDPFLVEALQNPRHRLTILRMELDIQ+FL NP QQ FEFQHFPTSYLRLAA
Sbjct: 5   QAITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRLAA 64

Query: 71  HRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDNEKNEQVKFVI 130
           HRVAQHYGL TMVQD+  DG  N+ILV+KT E R P+VRL EIPAKQ++++K+EQVK VI
Sbjct: 65  HRVAQHYGLITMVQDNSFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKSEQVKIVI 124

Query: 131 RPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQSPSEGK 190
           RPRPNK S    N+ G+KQ+ VRSVEERKEEYDRARARIFSSPSS  LDD  SQ   + K
Sbjct: 125 RPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSIDRK 184

Query: 191 YACSNRDETEGFRTLAGDLEK-FNGRDGMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLP 250
               ++DE E  R  A D EK  N RDG  SRVAIF+DREKDR+DPDYDR+YDRYIR+LP
Sbjct: 185 STNPSKDELENCRYSANDPEKNINPRDGAPSRVAIFRDREKDRTDPDYDRSYDRYIRSLP 244

Query: 251 TNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSPFSAMGMNRT 310
           TNQ+ +LAP  MQK+Q PF+  D G+  +G +P TQ SLSY P  SPV+SPF A+G N+T
Sbjct: 245 TNQSFNLAPLNMQKIQLPFIPYDTGFPQLGQMPRTQNSLSYQPAASPVMSPFCAVGSNQT 304

Query: 311 SRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 355
           SRD +Y QW SA+MMYAHSY Q RH+ FQAPFCQQPLSF+YSQNH
Sbjct: 305 SRDPAYVQWPSASMMYAHSYEQFRHAVFQAPFCQQPLSFEYSQNH 349

The following BLAST results are available for this feature:
BLAST of CmoCh14G004990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
R3HD2_MOUSE1.0e-1234.38R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2[more]
R3HD2_BOVIN1.1e-1130.89R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1[more]
R3HD1_HUMAN3.3e-1131.02R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3[more]
ARP21_MOUSE2.8e-1031.45cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2[more]
ARP21_HUMAN6.1e-1032.32cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2[more]
BLAST of CmoCh14G004990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFE9_CUCSA1.0e-18190.40Uncharacterized protein OS=Cucumis sativus GN=Csa_3G817720 PE=4 SV=1[more]
B9S6G5_RICCO6.6e-12869.86R3h domain containing protein, putative OS=Ricinus communis GN=RCOM_0536310 PE=4... [more]
A5AMT9_VITVI1.1e-12769.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00890 PE=4 SV=... [more]
A0A067JIX3_JATCU1.1e-12769.88Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00069 PE=4 SV=1[more]
B9IHM5_POPTR6.8e-12567.43Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03230g PE=4 SV=1[more]
BLAST of CmoCh14G004990 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56680.15.2e-9255.19 Single-stranded nucleic acid binding R3H protein[more]
AT2G40960.16.6e-8753.64 Single-stranded nucleic acid binding R3H protein[more]
AT3G10770.17.6e-7550.89 Single-stranded nucleic acid binding R3H protein[more]
AT5G05100.13.2e-7350.88 Single-stranded nucleic acid binding R3H protein[more]
AT5G33406.15.9e-1149.32 hAT dimerisation domain-containing protein / transposase-related[more]
BLAST of CmoCh14G004990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778685115|ref|XP_004136625.2|1.5e-18190.40PREDICTED: uncharacterized protein LOC101215817 isoform X1 [Cucumis sativus][more]
gi|659085059|ref|XP_008443221.1|2.2e-18089.83PREDICTED: R3H domain-containing protein 2-like isoform X2 [Cucumis melo][more]
gi|778685118|ref|XP_011652165.1|4.1e-17189.94PREDICTED: uncharacterized protein LOC101215817 isoform X2 [Cucumis sativus][more]
gi|659085057|ref|XP_008443220.1|5.9e-17089.35PREDICTED: R3H domain-containing protein 2-like isoform X1 [Cucumis melo][more]
gi|255561144|ref|XP_002521584.1|9.5e-12869.86PREDICTED: R3H domain-containing protein 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001374R3H_dom
IPR024771SUZ
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G004990.1CmoCh14G004990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainGENE3DG3DSA:3.30.1370.50coord: 36..107
score: 8.2
IPR001374R3H domainPFAMPF01424R3Hcoord: 36..87
score: 2.2
IPR001374R3H domainSMARTSM00393R3H_4coord: 18..100
score: 7.7
IPR001374R3H domainPROFILEPS51061R3Hcoord: 34..101
score: 10
IPR001374R3H domainunknownSSF82708R3H domaincoord: 9..135
score: 1.69
IPR024771SUZ domainPFAMPF12752SUZcoord: 125..173
score: 1.4
IPR024771SUZ domainPROFILEPS51673SUZcoord: 104..174
score: 12
NoneNo IPR availablePANTHERPTHR15672CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEINcoord: 310..354
score: 1.5E-183coord: 5..292
score: 1.5E
NoneNo IPR availablePANTHERPTHR15672:SF15EXPRESSED PROTEINcoord: 5..292
score: 1.5E-183coord: 310..354
score: 1.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G004990Cucsa.337520Cucumber (Gy14) v1cgycmoB0926
CmoCh14G004990CmaCh06G000350Cucurbita maxima (Rimu)cmacmoB798
CmoCh14G004990CmaCh14G004920Cucurbita maxima (Rimu)cmacmoB244
CmoCh14G004990Cla017442Watermelon (97103) v1cmowmB214
CmoCh14G004990Csa3G817720Cucumber (Chinese Long) v2cmocuB226
CmoCh14G004990MELO3C009731Melon (DHL92) v3.5.1cmomeB215
CmoCh14G004990ClCG10G016450Watermelon (Charleston Gray)cmowcgB207
CmoCh14G004990CSPI03G37540Wild cucumber (PI 183967)cmocpiB229
CmoCh14G004990Lsi03G016380Bottle gourd (USVL1VR-Ls)cmolsiB230
CmoCh14G004990Lsi01G017660Bottle gourd (USVL1VR-Ls)cmolsiB217
CmoCh14G004990Cp4.1LG03g04270Cucurbita pepo (Zucchini)cmocpeB247
CmoCh14G004990Cp4.1LG08g13600Cucurbita pepo (Zucchini)cmocpeB260
CmoCh14G004990MELO3C009731.2Melon (DHL92) v3.6.1cmomedB244
CmoCh14G004990CsaV3_3G039890Cucumber (Chinese Long) v3cmocucB0270
CmoCh14G004990Cla97C10G199350Watermelon (97103) v2cmowmbB230
CmoCh14G004990Bhi11G002346Wax gourdcmowgoB0290
CmoCh14G004990CsGy3G035030Cucumber (Gy14) v2cgybcmoB279
CmoCh14G004990Carg03502Silver-seed gourdcarcmoB0347
CmoCh14G004990Carg01290Silver-seed gourdcarcmoB0213
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh14G004990CmoCh06G000290Cucurbita moschata (Rifu)cmocmoB225
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G004990Cucurbita pepo (Zucchini)cmocpeB219
CmoCh14G004990Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G004990Cucumber (Gy14) v2cgybcmoB898
CmoCh14G004990Wax gourdcmowgoB0282
CmoCh14G004990Cucurbita maxima (Rimu)cmacmoB641