CmoCh14G002020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G002020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Senescence regulator
Location	Cmo_Chr14 : 911792 .. 912313 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAAGGAGAGGTTTAGGCTTTGGATTCGGTTTCAACTCGAAACCTAACTACATCTATCCTTCGTCGGAGACTGCAGTCAACCATGCCGACTCTTCTGCCGCCGATAACCTCTTCGAGTTCGACGAGGCGGATATCTGGACATCCGCTCATACTCCGCCGCTGGAATCGAGGAAGATTTTTCCGATCCCGAACAAACTTCCAAAGAGGAGCGGCGCTGCGGCGTCGGGAGAGAAGGCGGTGAAGGCATCTTCGTCGTTACCGGTCAACATTCCAGACTGGTCGAAGATTCTGCAGAGCGACCAGAGCAAGCAAGGCCGGAGAGAAACAGAGGAGGAGGATTTCGATGATAGCGATGACGACAACAACGACATTCGGCGGGCGCCACCGCACGAGTATTTAGCGCGACGGCGAGGCGATTCGCTTTCGGTTCACGAGGGGATCGGAAGAACGCTGAAGGGCAGAGATTTGAGAATGGTGAGAAATGCAATTTGGGAAAAAACTGGGTTCGAAGATTAA

mRNA sequence

ATGGCGTCAAGGAGAGGTTTAGGCTTTGGATTCGGTTTCAACTCGAAACCTAACTACATCTATCCTTCGTCGGAGACTGCAGTCAACCATGCCGACTCTTCTGCCGCCGATAACCTCTTCGAGTTCGACGAGGCGGATATCTGGACATCCGCTCATACTCCGCCGCTGGAATCGAGGAAGATTTTTCCGATCCCGAACAAACTTCCAAAGAGGAGCGGCGCTGCGGCGTCGGGAGAGAAGGCGGTGAAGGCATCTTCGTCGTTACCGGTCAACATTCCAGACTGGTCGAAGATTCTGCAGAGCGACCAGAGCAAGCAAGGCCGGAGAGAAACAGAGGAGGAGGATTTCGATGATAGCGATGACGACAACAACGACATTCGGCGGGCGCCACCGCACGAGTATTTAGCGCGACGGCGAGGCGATTCGCTTTCGGTTCACGAGGGGATCGGAAGAACGCTGAAGGGCAGAGATTTGAGAATGGTGAGAAATGCAATTTGGGAAAAAACTGGGTTCGAAGATTAA

Coding sequence (CDS)

ATGGCGTCAAGGAGAGGTTTAGGCTTTGGATTCGGTTTCAACTCGAAACCTAACTACATCTATCCTTCGTCGGAGACTGCAGTCAACCATGCCGACTCTTCTGCCGCCGATAACCTCTTCGAGTTCGACGAGGCGGATATCTGGACATCCGCTCATACTCCGCCGCTGGAATCGAGGAAGATTTTTCCGATCCCGAACAAACTTCCAAAGAGGAGCGGCGCTGCGGCGTCGGGAGAGAAGGCGGTGAAGGCATCTTCGTCGTTACCGGTCAACATTCCAGACTGGTCGAAGATTCTGCAGAGCGACCAGAGCAAGCAAGGCCGGAGAGAAACAGAGGAGGAGGATTTCGATGATAGCGATGACGACAACAACGACATTCGGCGGGCGCCACCGCACGAGTATTTAGCGCGACGGCGAGGCGATTCGCTTTCGGTTCACGAGGGGATCGGAAGAACGCTGAAGGGCAGAGATTTGAGAATGGTGAGAAATGCAATTTGGGAAAAAACTGGGTTCGAAGATTAA

Homology

[Close]

BLAST of CmoCh14G002020 vs. TrEMBL
Match: A0A0A0LDH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G739050 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-67
Identity = 141/180 (78.33%), Postives = 158/180 (87.78%), Query Frame = 1


Query: 1   MASRRG-LGFGFGFNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHT----PP 60
           MASRRG LGFGFGF+SKPNYIYP+S++ +  ++SS  +NLFEFDE+DIWTSA T    PP
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASDS-LRCSESSTDNNLFEFDESDIWTSATTTAPTPP 60

Query: 61  LESRKIFPIPNKLPKRSGAAASG-EKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEE 120
           +ESRKIFPI  KLPKRSG+AA+  EKAVKASSSLPVNIPDWSKILQ DQ+K GRR   +E
Sbjct: 61  MESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVADE 120

Query: 121 DFDDSDD-DNNDIRRAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           DFDDSDD D++DIRRAPPHEYLARRRGDS SVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DFDDSDDGDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 179

[Close]

BLAST of CmoCh14G002020 vs. TrEMBL
Match: A0A061EZZ8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_022158 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.2e-35
Identity = 95/180 (52.78%), Postives = 118/180 (65.56%), Query Frame = 1


Query: 1   MASRRGLGFGFGFNSKPNYIYPSSETA---VNHADSSAADNLFEFDEADIWTS--AHTPP 60
           MASR+       F SKP+YIYP+ E     VNH  S   ++L EFDEAD+W S  + T  
Sbjct: 1   MASRK-----IFFGSKPSYIYPTMELDDGNVNHPSSDHHNHL-EFDEADVWNSNESTTTT 60

Query: 61  LESRKIFPIPNKLPKR--SGAAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEE 120
           L+++K  P      K+       S  ++  AS+SLPVNIPDWSKIL+ +  + G+ + + 
Sbjct: 61  LDAKKPLPTSRTSSKKLLRKMEVSDRRSQMASASLPVNIPDWSKILKDEYREHGKSDEDV 120

Query: 121 EDFDDSDDDNNDIRRAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           ED DD  D ++D  R PPHEYLARRRG S SVHEGIGRTLKGRDLR VRNAIW+KTGFED
Sbjct: 121 EDDDDDVDHDHD-GRVPPHEYLARRRGASFSVHEGIGRTLKGRDLRRVRNAIWKKTGFED 173

[Close]

BLAST of CmoCh14G002020 vs. TrEMBL
Match: A0A067K226_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16502 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.3e-35
Identity = 89/164 (54.27%), Postives = 108/164 (65.85%), Query Frame = 1


Query: 18  NYIYPSSETAVNHADSSAADNLFEFDEADIWT--SAHTPPLESRKIFPIPNKLPKRSGAA 77
           NYI+ + ET +N   SS   NLFEFDE+DIW+  S+     ES+KI P   +  K  G  
Sbjct: 15  NYIFVNPETDINQVISSD-HNLFEFDESDIWSNNSSSVSQFESKKILPTSRQSKKGGGRN 74

Query: 78  ASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDF------DDSDDDNNDIRRA 137
           + G   V  SSS+PVNIPDWSKI + DQ  +  ++ ++ D       DD DDD+ D  R 
Sbjct: 75  SLGRLPVSCSSSVPVNIPDWSKIYKEDQYTRHNKDQDDLDQESDHYGDDRDDDDRD-GRV 134

Query: 138 PPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           PPHEYLAR+RG S SVHEGIGRTLKGRDLR VRNAIW+K GFED
Sbjct: 135 PPHEYLARKRGASFSVHEGIGRTLKGRDLRQVRNAIWKKVGFED 176

[Close]

BLAST of CmoCh14G002020 vs. TrEMBL
Match: W9S552_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024389 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.4e-32
Identity = 93/181 (51.38%), Postives = 118/181 (65.19%), Query Frame = 1


Query: 1   MASRRGLGFGFGFNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHT-----PP 60
           MASR+       +++KPNYIY +S      +DS A+D LFEFDE++IW++  +       
Sbjct: 1   MASRKS------YHAKPNYIYQAS------SDSMASDALFEFDESEIWSNTSSNQVAPSS 60

Query: 61  LESRKIFPIPNKLPKRSGAAA--SGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEE 120
           LE++K  P   + PK+ G     S   A  AS+SLPVNIPDWSKIL+ D   +  R+ ++
Sbjct: 61  LEAKKWIPAARE-PKKLGMMRKISTAAAPMASASLPVNIPDWSKILKDDY--KDHRKIDD 120

Query: 121 EDFDDSDDDNNDIR-RAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFE 174
            D D  D  N D+  R PPHEYLAR RG SLSVHEG+GRTLKGRDLR VRNAIW+K GFE
Sbjct: 121 GD-DGGDGGNGDLGDRIPPHEYLARTRGASLSVHEGVGRTLKGRDLRRVRNAIWKKVGFE 165

[Close]

BLAST of CmoCh14G002020 vs. TrEMBL
Match: B9IFN1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s09110g PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.4e-32
Identity = 84/165 (50.91%), Postives = 104/165 (63.03%), Query Frame = 1


Query: 13  FNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHTPPLESRKIFPIPN---KLP 72
           FN++ NYIYP+  +  N    +A D +FE DE D++ S+    LESRK  P      K P
Sbjct: 7   FNARANYIYPTLGSGNNTI--TAHDKVFELDEDDVYNSSVVSSLESRKTIPSSRSSKKAP 66

Query: 73  KRSGAAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDFDDSDDDNNDIR-R 132
           ++   A   + A    +SLPVNIPDWSKI    Q K+      + D D   DD++D+  R
Sbjct: 67  RKVEMAK--DLAPVTCASLPVNIPDWSKIYSDHQRKENENSIYQLDDDSDHDDDDDLDGR 126

Query: 133 APPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
            PPHEYLARRRG S SVHEGIGRTLKGRDLR VRNA+WE+ GFED
Sbjct: 127 VPPHEYLARRRGASFSVHEGIGRTLKGRDLRQVRNAVWERVGFED 167

[Close]

BLAST of CmoCh14G002020 vs. TAIR10
Match: AT5G03230.1 (AT5G03230.1 Protein of unknown function, DUF584)

HSP 1 Score: 135.2 bits (339), Expect = 3.9e-32
Identity = 78/166 (46.99%), Postives = 102/166 (61.45%), Query Frame = 1


Query: 13  FNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSA-HTPP--LESRKIFPIPNKLP 72
           F  KP YIYP  +  ++       +N+FEFDE+DI     H  P   ++++   I     
Sbjct: 7   FFVKPKYIYPEPKPEMSD------ENVFEFDESDIHNLGDHQLPNSFDAKRSISISRLRR 66

Query: 73  KRSGAAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDFDDSDDDNND--IR 132
           K +    SG + +  + SLPVNIPDWSKIL+S+       + + +D D+ DDD+ND   R
Sbjct: 67  KPTKTGDSGNREITKTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSNDGGRR 126

Query: 133 RAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
             PPHEYLARRRG S +VHEGIG T KGRDLR +RNAIWEK GF+D
Sbjct: 127 MIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of CmoCh14G002020 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 68/164 (41.46%), Postives = 100/164 (60.98%), Query Frame = 1


Query: 10  GFGFNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHTPPLESRKIFPIPNKLP 69
           G  + ++P+Y +  ++     +  +A+D+  EFDE+D++   H+   +  +      +  
Sbjct: 4   GKSYYARPSYRFLGTDQP---SYFTASDSGLEFDESDLFNPIHSDSPDFCRKISSSVRSG 63

Query: 70  KRSGAAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDFDDSDDDNNDIRRA 129
           K+S    S   +  A+SSLPVN+PDWSKIL+ +     RR  E+ D DD DD+ +     
Sbjct: 64  KKSSNRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDND-DDDDDNEDGGDWL 123

Query: 130 PPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           PPHE+LA+ R  S SVHEG+GRTLKGRDL  VRNAI+EK GF+D
Sbjct: 124 PPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of CmoCh14G002020 vs. TAIR10
Match: AT3G45210.1 (AT3G45210.1 Protein of unknown function, DUF584)

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-21
Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 1


Query: 37  DNLFEFDEADIWTSAHTPPLESRKIFPIPNKLPKRSGAAASGEKAVKASSSLPVNIPDWS 96
           D+ FEFDE+D++++    P   RK+     K      ++ +       +SSLP+N+ +WS
Sbjct: 29  DSEFEFDESDLYSNRSDSPEFRRKLITSNRK------SSPATVTTTTVASSLPMNVQNWS 88

Query: 97  KILQSDQSKQGRRETEEEDFDDSDDDNNDIRRAPPHEYLARRRGDSLSVHEGIGRTLKGR 156
           KIL     K+ R+  E       +DD+    + PPHEYLA+ R  S SVHEGIGRTLKGR
Sbjct: 89  KIL----GKENRKSIE-------NDDDGGEGKLPPHEYLAKTRMASFSVHEGIGRTLKGR 148

Query: 157 DLRMVRNAIWEKTGFED 174
           D+  VRNAI EKTGF D
Sbjct: 149 DMSRVRNAILEKTGFLD 148

[Close]

BLAST of CmoCh14G002020 vs. TAIR10
Match: AT2G28400.1 (AT2G28400.1 Protein of unknown function, DUF584)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 67/160 (41.88%), Postives = 83/160 (51.88%), Query Frame = 1


Query: 15  SKPNYIYPSSETAVNHADSSAADNLFEFDEADIW-TSAHTPPLESRKIFPIPNKLPKRSG 74
           SK  Y  PS          +A  + FE DE D++ T + +    S     I +     + 
Sbjct: 4   SKCYYPRPSHRFFTTDQHVTATSD-FELDEWDLFNTGSDSSSSFSFSDLTITSGRTGTNR 63

Query: 75  AAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDFDDSDDDNNDIRRAPPHE 134
               G  + KA+SSLPVN+PDWSKIL  +  +Q +   EEE   D        RR PPHE
Sbjct: 64  QIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEILCGEGTRRVPPHE 123

Query: 135 YLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
            LA RR  S SVHEG GRTLKGRDL  VRN I++  G ED
Sbjct: 124 LLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of CmoCh14G002020 vs. TAIR10
Match: AT1G61930.1 (AT1G61930.1 Protein of unknown function, DUF584)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 1


Query: 65  PNKLPKRSGAAASGEK-AVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDFDDSDDDN 124
           P  + K  G    GE+   K +SS PVN+PDWSKI + D  +         + DD DD++
Sbjct: 92  PMIVQKIHGGGGEGEEDRRKLASSAPVNVPDWSKIYRVDSVES------IHELDDEDDED 151

Query: 125 NDIRRAPPHEYLARRR--------GDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGF 172
            +    PPHEYLA+ +        G   SV +G+GRTLKGR+LR VR+AIW +TGF
Sbjct: 152 EESGMMPPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of CmoCh14G002020 vs. NCBI nr
Match: gi|659084050|ref|XP_008442681.1| (PREDICTED: uncharacterized protein LOC103486480 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 4.9e-69
Identity = 141/179 (78.77%), Postives = 158/179 (88.27%), Query Frame = 1


Query: 1   MASRRG-LGFGFGFNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHT----PP 60
           MASRRG LGFGFGF+SKPNYIYP+SE+ + +++SS  + LFEFDE+DIWTSA T    PP
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASES-LRYSESSTENGLFEFDESDIWTSATTTTPTPP 60

Query: 61  LESRKIFPIPNKLPKRSGAAASG-EKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEE 120
           +ESRKIFPI  KLPKRSG+AA+  EKAVKASSSLPVNIPDWSKILQ DQ+K GRR   EE
Sbjct: 61  MESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVAEE 120

Query: 121 DFDDSDDDNNDIRRAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           DFDDSDD+++DIRRAPPHEYLARRRGDS SVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DFDDSDDEDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 178

[Close]

BLAST of CmoCh14G002020 vs. NCBI nr
Match: gi|449440101|ref|XP_004137823.1| (PREDICTED: uncharacterized protein LOC101217342 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-67
Identity = 141/180 (78.33%), Postives = 158/180 (87.78%), Query Frame = 1


Query: 1   MASRRG-LGFGFGFNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHT----PP 60
           MASRRG LGFGFGF+SKPNYIYP+S++ +  ++SS  +NLFEFDE+DIWTSA T    PP
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASDS-LRCSESSTDNNLFEFDESDIWTSATTTAPTPP 60

Query: 61  LESRKIFPIPNKLPKRSGAAASG-EKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEE 120
           +ESRKIFPI  KLPKRSG+AA+  EKAVKASSSLPVNIPDWSKILQ DQ+K GRR   +E
Sbjct: 61  MESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVADE 120

Query: 121 DFDDSDD-DNNDIRRAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           DFDDSDD D++DIRRAPPHEYLARRRGDS SVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DFDDSDDGDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 179

[Close]

BLAST of CmoCh14G002020 vs. NCBI nr
Match: gi|590630634|ref|XP_007027332.1| (Uncharacterized protein TCM_022158 [Theobroma cacao])

HSP 1 Score: 156.0 bits (393), Expect = 6.0e-35
Identity = 95/180 (52.78%), Postives = 118/180 (65.56%), Query Frame = 1


Query: 1   MASRRGLGFGFGFNSKPNYIYPSSETA---VNHADSSAADNLFEFDEADIWTS--AHTPP 60
           MASR+       F SKP+YIYP+ E     VNH  S   ++L EFDEAD+W S  + T  
Sbjct: 1   MASRK-----IFFGSKPSYIYPTMELDDGNVNHPSSDHHNHL-EFDEADVWNSNESTTTT 60

Query: 61  LESRKIFPIPNKLPKR--SGAAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEE 120
           L+++K  P      K+       S  ++  AS+SLPVNIPDWSKIL+ +  + G+ + + 
Sbjct: 61  LDAKKPLPTSRTSSKKLLRKMEVSDRRSQMASASLPVNIPDWSKILKDEYREHGKSDEDV 120

Query: 121 EDFDDSDDDNNDIRRAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           ED DD  D ++D  R PPHEYLARRRG S SVHEGIGRTLKGRDLR VRNAIW+KTGFED
Sbjct: 121 EDDDDDVDHDHD-GRVPPHEYLARRRGASFSVHEGIGRTLKGRDLRRVRNAIWKKTGFED 173

[Close]

BLAST of CmoCh14G002020 vs. NCBI nr
Match: gi|802685259|ref|XP_012082356.1| (PREDICTED: uncharacterized protein LOC105642215 [Jatropha curcas])

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 89/164 (54.27%), Postives = 108/164 (65.85%), Query Frame = 1


Query: 18  NYIYPSSETAVNHADSSAADNLFEFDEADIWT--SAHTPPLESRKIFPIPNKLPKRSGAA 77
           NYI+ + ET +N   SS   NLFEFDE+DIW+  S+     ES+KI P   +  K  G  
Sbjct: 15  NYIFVNPETDINQVISSD-HNLFEFDESDIWSNNSSSVSQFESKKILPTSRQSKKGGGRN 74

Query: 78  ASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRETEEEDF------DDSDDDNNDIRRA 137
           + G   V  SSS+PVNIPDWSKI + DQ  +  ++ ++ D       DD DDD+ D  R 
Sbjct: 75  SLGRLPVSCSSSVPVNIPDWSKIYKEDQYTRHNKDQDDLDQESDHYGDDRDDDDRD-GRV 134

Query: 138 PPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 174
           PPHEYLAR+RG S SVHEGIGRTLKGRDLR VRNAIW+K GFED
Sbjct: 135 PPHEYLARKRGASFSVHEGIGRTLKGRDLRQVRNAIWKKVGFED 176

[Close]

BLAST of CmoCh14G002020 vs. NCBI nr
Match: gi|657990878|ref|XP_008387660.1| (PREDICTED: uncharacterized protein LOC103450120 [Malus domestica])

HSP 1 Score: 149.1 bits (375), Expect = 7.3e-33
Identity = 95/187 (50.80%), Postives = 114/187 (60.96%), Query Frame = 1


Query: 1   MASRRGLGFGFGFNSKPNYIYPSSETAVNHADSSAADNLFEFDEADIWTSAHTPPLESRK 60
           MASR+   +G     KP+ I+P+  T  +   S   D LFEFDEADI  S+ +P  ES+K
Sbjct: 1   MASRKSSFYG-----KPSSIFPAPSTDDSPIGS---DGLFEFDEADIGNSSSSPVAESKK 60

Query: 61  IFPIPNKLPKRSG----------AAASGEKAVKASSSLPVNIPDWSKILQSDQSKQGRRE 120
                 + PK+ G          A   G   V  SSSLPVNIPDWS+IL+    +Q + E
Sbjct: 61  SSVPSRREPKKMGRKMMVMSMSVAEMGGAAKVVTSSSLPVNIPDWSEILKEGYKEQRKLE 120

Query: 121 TEEE---DFDDSDDDNND-IRRAPPHEYLARRRGDSLSVHEGIGRTLKGRDLRMVRNAIW 174
           + E+   DF  +DDDN+    R PPHEYLAR RG S SVHEGIGRTLKGRDLR VRNAIW
Sbjct: 121 SGEDGGGDFYGADDDNDSGYGRVPPHEYLARMRGASFSVHEGIGRTLKGRDLRRVRNAIW 179

The following BLAST results are available for this feature:

BLAST of CmoCh14G002020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh14G002020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDH0_CUCSA	1.4e-67	78.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G739050 PE=4 SV=1	[more]
A0A061EZZ8_THECC	4.2e-35	52.78	Uncharacterized protein OS=Theobroma cacao GN=TCM_022158 PE=4 SV=1	[more]
A0A067K226_JATCU	9.3e-35	54.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16502 PE=4 SV=1	[more]
W9S552_9ROSA	7.4e-32	51.38	Uncharacterized protein OS=Morus notabilis GN=L484_024389 PE=4 SV=1	[more]
B9IFN1_POPTR	7.4e-32	50.91	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s09110g PE=4 SV=1	[more]

BLAST of CmoCh14G002020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03230.1	3.9e-32	46.99	Protein of unknown function, DUF584	[more]
AT5G60680.1	3.2e-26	41.46	Protein of unknown function, DUF584	[more]
AT3G45210.1	2.4e-21	43.80	Protein of unknown function, DUF584	[more]
AT2G28400.1	1.7e-19	41.88	Protein of unknown function, DUF584	[more]
AT1G61930.1	1.7e-16	43.10	Protein of unknown function, DUF584	[more]

BLAST of CmoCh14G002020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084050\|ref\|XP_008442681.1\|	4.9e-69	78.77	PREDICTED: uncharacterized protein LOC103486480 [Cucumis melo]	[more]
gi\|449440101\|ref\|XP_004137823.1\|	2.0e-67	78.33	PREDICTED: uncharacterized protein LOC101217342 [Cucumis sativus]	[more]
gi\|590630634\|ref\|XP_007027332.1\|	6.0e-35	52.78	Uncharacterized protein TCM_022158 [Theobroma cacao]	[more]
gi\|802685259\|ref\|XP_012082356.1\|	1.3e-34	54.27	PREDICTED: uncharacterized protein LOC105642215 [Jatropha curcas]	[more]
gi\|657990878\|ref\|XP_008387660.1\|	7.3e-33	50.80	PREDICTED: uncharacterized protein LOC103450120 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G002020.1	CmoCh14G002020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 42..173 score: 7.8
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 18..173 score: 5.1
None	No IPR available	PANTHER	PTHR33083:SF10	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16	coord: 18..173 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G002020	Cucsa.386090	Cucumber (Gy14) v1	cgycmoB1062
CmoCh14G002020	Cucsa.306910	Cucumber (Gy14) v1	cgycmoB0837
CmoCh14G002020	CmaCh06G003770	Cucurbita maxima (Rimu)	cmacmoB792
CmoCh14G002020	CmaCh14G002100	Cucurbita maxima (Rimu)	cmacmoB244
CmoCh14G002020	Cla017819	Watermelon (97103) v1	cmowmB214
CmoCh14G002020	Cla008740	Watermelon (97103) v1	cmowmB237
CmoCh14G002020	Csa3G739050	Cucumber (Chinese Long) v2	cmocuB227
CmoCh14G002020	MELO3C009339	Melon (DHL92) v3.5.1	cmomeB215
CmoCh14G002020	ClCG10G020310	Watermelon (Charleston Gray)	cmowcgB207
CmoCh14G002020	ClCG02G021170	Watermelon (Charleston Gray)	cmowcgB211
CmoCh14G002020	CSPI03G33210	Wild cucumber (PI 183967)	cmocpiB230
CmoCh14G002020	Lsi10G012660	Bottle gourd (USVL1VR-Ls)	cmolsiB215
CmoCh14G002020	Lsi03G020270	Bottle gourd (USVL1VR-Ls)	cmolsiB230
CmoCh14G002020	Cp4.1LG16g05370	Cucurbita pepo (Zucchini)	cmocpeB229
CmoCh14G002020	Cp4.1LG03g01690	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G002020	Cp4.1LG08g11060	Cucurbita pepo (Zucchini)	cmocpeB259
CmoCh14G002020	MELO3C025773.2	Melon (DHL92) v3.6.1	cmomedB222
CmoCh14G002020	MELO3C009339.2	Melon (DHL92) v3.6.1	cmomedB244
CmoCh14G002020	CsaV3_3G035790	Cucumber (Chinese Long) v3	cmocucB0270
CmoCh14G002020	Cla97C10G203490	Watermelon (97103) v2	cmowmbB230
CmoCh14G002020	Cla97C02G047210	Watermelon (97103) v2	cmowmbB236
CmoCh14G002020	Bhi11G001785	Wax gourd	cmowgoB0285
CmoCh14G002020	CsGy3G030900	Cucumber (Gy14) v2	cgybcmoB279
CmoCh14G002020	Carg03768	Silver-seed gourd	carcmoB0347
CmoCh14G002020	Carg00982	Silver-seed gourd	carcmoB0214

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G002020	CmoCh02G008940	Cucurbita moschata (Rifu)	cmocmoB211
CmoCh14G002020	CmoCh06G003730	Cucurbita moschata (Rifu)	cmocmoB222

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G002020	Cucurbita pepo (Zucchini)	cmocpeB218
CmoCh14G002020	Cucurbita pepo (Zucchini)	cmocpeB240
CmoCh14G002020	Bottle gourd (USVL1VR-Ls)	cmolsiB218
CmoCh14G002020	Cucumber (Gy14) v2	cgybcmoB712
CmoCh14G002020	Silver-seed gourd	carcmoB0460
CmoCh14G002020	Cucumber (Chinese Long) v3	cmocucB0302
CmoCh14G002020	Watermelon (97103) v2	cmowmbB239
CmoCh14G002020	Wax gourd	cmowgoB0287
CmoCh14G002020	Cucurbita moschata (Rifu)	cmocmoB217
CmoCh14G002020	Cucurbita moschata (Rifu)	cmocmoB228
CmoCh14G002020	Cucumber (Gy14) v1	cgycmoB0320
CmoCh14G002020	Cucurbita maxima (Rimu)	cmacmoB544
CmoCh14G002020	Cucurbita maxima (Rimu)	cmacmoB640
CmoCh14G002020	Cucurbita maxima (Rimu)	cmacmoB848
CmoCh14G002020	Wild cucumber (PI 183967)	cmocpiB259
CmoCh14G002020	Cucumber (Chinese Long) v2	cmocuB253
CmoCh14G002020	Watermelon (Charleston Gray)	cmowcgB214
CmoCh14G002020	Watermelon (97103) v1	cmowmB236