CmoCh14G001800 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTGGAGGAGGTACAATATTTCTTCCAAACTTGGTGTATTTTCTATATTTCCCCATGGGTGGTAAAAGTTGACGGGTCAGATGTTTTTCTTTGGCCCTTAGGATCTGTTTAAACTTTTCTTGCTTGCAAGTACATACATCTATATCTTATTCATTAGGAATTTCATTATATAAGCAGAAAATAAATTTTGCTTCGTACGTTTTTATTTTGTTCAACAGTTTTAGGATGTTGAGTAATGTTCACCTTAATTGATTTTTCTTCTTGAACGGGGAGACCATATTTATGCTATACATTAACAATTCCGTAAATTTTTCGTCATTTCACTTTCAAATTTCAATGATTGAAATCAGACACCAAGACCTGTGCAAAAATAAAATAAAGTAACTAAAACAATCACGCACCAACAAGTAGTTCGATGACTCTCACTGTCTGATAATATCAATTCATAGGGCTAAAAATAGTTTAACTTATTTGCTGCGTTATGAAATCAATTGATTTTTTTTAATTACACTATAACACTTGTACCAGGTGTTTATGTTGTGGGTTTCTAATTACCATTCTTTACTAGTACAGATTGAGCAACTTTTCATATATTTTCAGGCAACTATTTGTATCTGGCGGCTGTTTCAATAAAAAATTCCAAGTCACAGTCTATACACCTGAGGAGTTGCAACATTCTAACTCTAATGCAAGAGAAATCGAGTTGCTTGATTTTTTCTCATTCTCCCAAGAGATTGCAATTTATTATGAAATTCTTCTCTGGGGAATGTGGTTCGGATGTCTTCTGTCAAATACTTCAATCCTTATGTTCATCCATCTATGGACATGAACTTGTTAAAGGTAACATTTTATACAAATTCAGAATTGCTGATTGTCAACATTTTCTTTGGCTAACTATATTTTGTGGATCAACTTAAATCTGAAAAGCGGGAATAACACTAGTACTATTTGGTGGTGTACGAAAGCATTCAAAAGACCAGAATAAAGTCCCTGTTAGATGGGTTATTCATGTCATAGATGTTGGTATGCTTCTATGTCATCCTTTCCCATGTTCACTTCTGGATTTTGAACAATTATTTTGAAAAGAATGCAGTGTGATCAATGAACAGACATCATAGATAACTTTTCATTGTCAATTTCTTAGGTTGTCCTGGACTTGGCAAAAATCAACTACGGCAAGCGACTGCAGCTGTCTCAACACATGGTATTTATTTTTGTGGTAATGCAGCAACCAAGGCCGGGCCTAACTGTAGCTGTTGTGAGGGATTCCAGGAAAGATGACCATGCTTTTGGGGTCGGTATTTGTCTTTTCTTAAGCACTAAGACGACATTTCCTATATTTGAAATCCAGGAATAAGTTCTTATAATGGTTGTGATTCTCTGCTTTTTTAATCGTGGAAACAAAATATTGTGGCTGCTTGATGATTTTGGAAGTCATTCATAATCTTTTGTTCCTTAACTCGCTAGTACTGTATAAATCCTTACATTCGGAGCCCGGGAAATGCTTATTCTGAGCAATAGCACAAGTCTTTCGGGCTTATTGCATACATAGATTTCACAAGTTGGTAAAAGTTGAACGATATTGGATCTAATCTTTCAACGTTTTACAATAACAGAGTGTAGTTGATTGAAGAGCGTTTTATATGAATGCTCATCTGATGATTAAAAGGTGATGATAATTTACTTTTTCCAAAATCACTATGGTACTTGTAGATGGTGGATGATGCTGTAAAGATGAATTTGATAAAATGTCTGCAGAACATCAGGCGTTGTGGCCCGAAACCTGAATTTCACTTGAATTCTTACGTTTCATTTTCCATGGCTAGATGTTCTTACATTAGATTATTGTAGGCCCTACTGGCAGAAATTGTACTTACCAACTGCGTGACCAGAATCATGAGCGGATGTTACACCAGTTACAGCAAGGCAACTGAAAAGTCTGGTGAGGCTGGCAGAAGCTCGAGCTCGAGTAGACCTCAGGGAAAAAATTACAGTCCAAGATACCATGGTTAGTCATTGAAGGATGTAGCCAAATTTTAATTTCTATAACTCATACTCGTCTTTAAATATTAGGCTTGTTTATTACTCACTTTTAGTTTTGTTTTTCACACTGTCATCGTCATCATTTTTAGATTTTTTTTTTTTTTTTTGTCAATTTTCAAAATGAAAAATGGGGAAAAAAAAATTAAAATCTTCTTTTCATAGTTTCTGATATTCGTTAGAATTTCCATTTTTTAGATTTTTTTGGAAGAATAAAAAACTAATTATAAAACAAAGGTTGTTGGTAAGCTTGATTTTTAATAACCGAATTGTGGTCGTATCACACGGATTCCATGAGAAAATTACAAACTTCACCTTGCACGAGTTTTTAAGTGCTAATTTCATATGTATTATTAACTTTGCAGGATGTGGTAGAAATAATGAAGGAATCCCTTTATGACAAGTATGCAGATGAACATGGCGTCCTGGATTTTGGTCGAAGTGGGGGAAATGAGTCAACAGAAAGAAGCCAAGTGATTTATGAGTGCACTCACAAACAATCAGAGTTGCAGCATAAAGACAGTTTTTCCTATCGCATTCGTCTCTAAGCTAACCACATATGCTATCGCCTGGAGGAAATATATAGCTTGGCAGATAGAATTGGTCGAGTAGCTGACATCGTTACCTTCATAGAAAATCTTGATAGTGTTTGATATCTGTTTTATAAGGGGCCAAAGACATACCAGGTTTAGTTCACAATCCTCTTAGCAAGCATAAAACCAATTAAAAAACAAAACTATGCATCAACAGATCATTATCAATCTTTGCACTAACCCATCCATGTTTTAAACAGGTGCTGTTCTCATCGTACACCAGTCAGTCAGCAAGGCCAGGAGGATAAAACCGGGCGATATTGAGAGGTCATACTTTTTTTACTCTATTTTTTCTCCCGCAATGTCTCCAGGCTACAGATGCCTCTTCCACAATACCAAGCACGTATTAATTATTAGTTGATGCTAAAATAATTGCATAGTATATACCAATGAATAAAAGTATTTAAACGGTACATAAAGGATGCTGTTCTGCTGGATAATATCCATATTATCTTTGCAGTTCACGCATTGTTTTTCATGTTTCAAGAAGCCCCTTTAGATAAATTGTGAATTCAAATATAGGTCATATATTCAAATTAGGATTGTCACAGAGCTTTCCATAAGTTGGAATGCACATGAACTAGTTCAGACTGTAGACACGCACTGCCACATAAATACATACATAATAAGCACTTTGTTTCATTAGCATTATGCAGTCCAATGTATTATCTTCCCTCAGAAAACTTTTACAAAATCAAATATGCAGTATAAATATTTCTACTTTTTCGTATTTTCTTTTCCTCCTTATTTTCTATTGGAATCCTTGACAATATACTACAGTGACACACCGAACGGTTGAGGTAGAGGACCAATGAGAAATAAGTTGGAATGATCCGAAGCCAGGCTTAATTTAATAATCACGATCTAAAGGCTCCAATCTCCACTCACTCCCATAATAAGAATTGGGCAAACCCAACCAAAACTTGAAAGCCTCAGCTGCTCTCTTCTTCTCAATCCTTCTATCCTGTCTGGCCTTTGATGCATGTTTACTAGTAAACATCCTAGAATGCATTTCCACGTAAATTCTACTGTACTTTGTCTTGTTGGGTGGAATCCCATACTCTTCCATACAAGCCACGATTTCTAGAGCCTTCCTAAAGAAAGCAGCCCGGACACATATATCGGCTAGAGTATCCAATAGCCCTTCATCAGGTTTCAAGGAAGGGGGAGATGAAGAATCAGACTTATGTCTATTCACTGAACATCTCTCCTTTACTTCGTTCCATAGCAGAAGGGCTTCACCTGGTTTTCTAGCTAAAGAAATTCCATTGGCGAGACTGCCATATGTAGAAACATCAGGGAAAAATCCATTCTCTTTCATTTTCTGGACTAATTGTTTTGCTTCTTCTATCAATCCTAGCCTACAATACCCTTCAATCAACATATTCCAGGCTACTATATCAGCTTTCACTCTAGGATCATTCAACATTTCATCAAACACTTTCCTCGCTAGCTTTGGTTGACCCGAATGAGCAAAAGCTTTCATCAGAGTGGTATAACTAACCTTGGTGGGTGCTATTCCTTTCGATCGCATCTCATTAAAGAACCCAAGAGCTCCTGCACTATCATCGACCAGTATGCATCCATCAATCAAGATGTTATAAGAAACCACATCAGGTTCAATGCCTGCCCCATTGACCATCTCCTTAAGCAGCTCCCTGGCCTTGTCCATCTGAAGCAACCTGCAATAACCCTTTAGGAGAATATTGTAGGTAATTCTATTAGCAGGACACCCAATTCTTGTCATTTCAGCAAGCACTTGACGTGCTCGGTCCATCGACCCTGCCTTTACCAGAGCCGAAACTACAGTCGTATATGATACATGATCAGGATGACTGGATTGATCACCCTGATTGCGCATCGCCTCGAGCATGCGTATTGTATCAGCTACTCGACCCTCATTCATATACCCTTTCATCAGAGTCGTATAAATTCTCGAGTTAGGAGAATAGGCTTTTGGCAACAACGGTGGCTCTGAATCACTATCTTCATTCAAATTAGGAAGCAACTTCTTGAATATCTCATCTTCATCTTCATCTTCATATTCATTCAAATCTTCCGCATCTTCGATCTCCTTCAAATTACCATCCCTGAGAATCCTGCAAATATCTCTTTTCCCTTCTCTCATTGCTTGAACTACCTTCTCAGCCGTTTCCAAATCTCCAAACCCTACATAAGCCGCCACAACCGAATGCAAAGTCGTCATACACATTGGAATATCCTTTGCAAGGATCATCTCCAACACATACACAATAAGATCCTTCCTATTGGCTCTCGCACAGAGCTTGATCATGACATTGAAAGTCAAAACATCAGGCTCAGCACCAAATTCTCCCATTTCCTCGAACAATTGCAGAAACTTCTCATAGGCACCCATGTTGGCGCAGGCATTGAGAACGCCGTTAAAGGCCGCTGTGTCCGGCCGCGAGTCAGCTGTTATTGCCGGATCTGCAAACCGGCGGAGGCGCTGAGTCACTGAACTGAATAGCTTGATTGCTTCTGCAGGTCCACCGTCTGGTGAAGCTGCAAGGCGGCTGACGACGGCGCTCCACGCTTTTACGTGGGGAAGGTAACCTGAACGAAGCATGGACTTAATGACAGAACTGGCGTAAGGAGTGTGTCCAGCCTTGGCGGCAGCAACGGCAAGGAGGCCGAGGGAATTGGCGTCGAGACGGTGGAGCTGGTTGTCATGGCGGAGGCGCGTGAGGATGGACTGAGCTCGAGTGAGGCTCGAAGGGGTGTTTTGGTAAGACAATTGAGAAACTAAACGGCTGAGACAAGTAGGGCTGGGTAGATTAGTACATTGGGTATACGTAATCCAGGCCTCATCCGTTTTCCTCTGGCGTAGCTGTGATAAGAGTCTCTGTTCTAAGGAACTGGAAGACGCATCGGATAGGAGAGAGAGGTCAGTGAAACTAGTTTGACGGGCGGTGCTGTGCACCAGGAAGGGGCGGACAGCGGTAGCGGCAGCGGCGGTGTCAGCAGTGGAAGTGGTGGTGGAGAGTGGTGGAGAGGGCCGAAGGGGAAAGGTTAAAGGGAGGTGCAAGTTAAGATTGGCAGTGAAGATGAGCATGGGGACGGTTGTGACGGAGGAAAAGGCGGCGACGGCGGCAGTGATTCATGGCTGCTCCATGAATGGAATAGAAGGGAAGAGATTGAGGGAGGATTTATCTGAAAATTGGGGGGAAAATGGGGTTTTAGAGAAGGAGATAA ATGGATATTGGAGGAGGCAACTATTTGTATCTGGCGGCTGTTTCAATAAAAAATTCCAAGTCACAGTCTATACACCTGAGGAGTTGCAACATTCTAACTCTAATGCAAGAGAAATCGAGTTGCTTGATTTTTTCTCATTCTCCCAAGAGATTGCAATTTATTATGAAATTCTTCTCTGGGGAATGTGGTTCGGATGTCTTCTGTCAAATACTTCAATCCTTATGTTCATCCATCTATGGACATGAACTTGTTAAAGCGGGAATAACACTAGTACTATTTGGTGGTGTACGAAAGCATTCAAAAGACCAGAATAAAGTCCCTGTTAGATGGGTTATTCATGTCATAGATGTTGGTTGTCCTGGACTTGGCAAAAATCAACTACGGCAAGCGACTGCAGCTGTCTCAACACATGTTACAGCAAGGCAACTGAAAAGTCTGGTGAGGCTGGCAGAAGCTCGAGCTCGAGTAGACCTCAGGGAAAAAATTACAGTCCAAGATACCATGGATGTGGTAGAAATAATGAAGGAATCCCTTTATGACAAGTATGCAGATGAACATGGCGTCCTGGATTTTGGTCGAAGTGGGGGAAATGAGTCAACAGAAAGAAGCCAAGTGATTTATGAGTGCACTCACAAACAATCAGAGTTGCAGCATAAAGACAGTTTTTCCTATCGCATTCGTCTCTAAGCTAACCACATATGCTATCGCCTGGAGGAAATATATAGCTTGGCAGATAGAATTGGTCGAGTAGCTGACATCGTTACCTTCATAGAAAATCTTGATAGTGTTTGATATCTGTTTTATAAGGGGCCAAAGACATACCAGGTGCTGTTCTCATCGTACACCAGTCAGTCAGCAAGGCCAGGAGGATAAAACCGGGCGATATTGAGAGGTCCACCGTCTGGTGAAGCTGCAAGGCGGCTGACGACGGCGCTCCACGCTTTTACGTGGGGAAGGTAACCTGAACGAAGCATGGACTTAATGACAGAACTGGCGTAAGGAGTGTGTCCAGCCTTGGCGGCAGCAACGGCAAGGAGGCCGAGGGAATTGGCGTCGAGACGGTGGAGCTGGTTGTCATGGCGGAGGCGCGTGAGGATGGACTGAGCTCGAGTGAGGCTCGAAGGGGTGTTTTGGTAAGACAATTGAGAAACTAAACGGCTGAGACAAGTAGGGCTGGGTAGATTAGTACATTGGGTATACGTAATCCAGGCCTCATCCGTTTTCCTCTGGCGTAGCTGTGATAAGAGTCTCTGTTCTAAGGAACTGGAAGACGCATCGGATAGGAGAGAGAGGTCAGTGAAACTAGTTTGACGGGCGGTGCTGTGCACCAGGAAGGGGCGGACAGCGGTAGCGGCAGCGGCGGTGTCAGCAGTGGAAGTGGTGGTGGAGAGTGGTGGAGAGGGCCGAAGGGGAAAGGTTAAAGGGAGGTGCAAGTTAAGATTGGCAGTGAAGATGAGCATGGGGACGGTTGTGACGGAGGAAAAGGCGGCGACGGCGGCAGTGATTCATGGCTGCTCCATGAATGGAATAGAAGGGAAGAGATTGAGGGAGGATTTATCTGAAAATTGGGGGGAAAATGGGGTTTTAGAGAAGGAGATAA ATGGATATTGGAGGAGGCAACTATTTGTATCTGGCGGCTGTTTCAATAAAAAATTCCAAGTCACAGTCTATACACCTGAGGAGTTGCAACATTCTAACTCTAATGCAAGAGAAATCGAGTTGCTTGATTTTTTCTCATTCTCCCAAGAGATTGCAATTTATTATGAAATTCTTCTCTGGGGAATGTGGTTCGGATGTCTTCTGTCAAATACTTCAATCCTTATGTTCATCCATCTATGGACATGAACTTGTTAAAGCGGGAATAACACTAGTACTATTTGGTGGTGTACGAAAGCATTCAAAAGACCAGAATAAAGTCCCTGTTAGATGGGTTATTCATGTCATAGATGTTGGTTGTCCTGGACTTGGCAAAAATCAACTACGGCAAGCGACTGCAGCTGTCTCAACACATGTTACAGCAAGGCAACTGAAAAGTCTGGTGAGGCTGGCAGAAGCTCGAGCTCGAGTAGACCTCAGGGAAAAAATTACAGTCCAAGATACCATGGATGTGGTAGAAATAATGAAGGAATCCCTTTATGACAAGTATGCAGATGAACATGGCGTCCTGGATTTTGGTCGAAGTGGGGGAAATGAGTCAACAGAAAGAAGCCAAGTGATTTATGAGTGCACTCACAAACAATCAGAGTTGCAGCATAAAGACAGTTTTTCCTATCGCATTCGTCTCTAA
BLAST of CmoCh14G001800 vs. Swiss-Prot
Match: MCM8_ARATH (Probable DNA helicase MCM8 OS=Arabidopsis thaliana GN=MCM8 PE=2 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 7.4e-33 Identity = 92/204 (45.10%), Postives = 117/204 (57.35%), Query Frame = 1
BLAST of CmoCh14G001800 vs. Swiss-Prot
Match: MCM8_ORYSJ (Probable DNA helicase MCM8 OS=Oryza sativa subsp. japonica GN=MCM8 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30 Identity = 82/145 (56.55%), Postives = 94/145 (64.83%), Query Frame = 1
BLAST of CmoCh14G001800 vs. Swiss-Prot
Match: MCM8_ORYSI (Probable DNA helicase MCM8 OS=Oryza sativa subsp. indica GN=MCM8 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30 Identity = 82/145 (56.55%), Postives = 94/145 (64.83%), Query Frame = 1
BLAST of CmoCh14G001800 vs. Swiss-Prot
Match: MCM8_XENTR (DNA helicase MCM8 OS=Xenopus tropicalis GN=mcm8 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
BLAST of CmoCh14G001800 vs. Swiss-Prot
Match: MCM8_XENLA (DNA helicase MCM8 OS=Xenopus laevis GN=mcm8 PE=2 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TrEMBL
Match: A0A0A0LDE1_CUCSA (DNA helicase OS=Cucumis sativus GN=Csa_3G736810 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.5e-37 Identity = 97/146 (66.44%), Postives = 105/146 (71.92%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TrEMBL
Match: V4SN54_9ROSI (DNA helicase OS=Citrus clementina GN=CICLE_v10013573mg PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35 Identity = 103/206 (50.00%), Postives = 126/206 (61.17%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TrEMBL
Match: A0A0D2RCB0_GOSRA (DNA helicase OS=Gossypium raimondii GN=B456_002G248900 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 91/144 (63.19%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TrEMBL
Match: A0A0D2RCA5_GOSRA (DNA helicase OS=Gossypium raimondii GN=B456_002G248900 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 91/144 (63.19%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TrEMBL
Match: A0A0D2NSJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G248900 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 91/144 (63.19%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TAIR10
Match: AT3G09660.1 (AT3G09660.1 minichromosome maintenance 8) HSP 1 Score: 142.1 bits (357), Expect = 4.2e-34 Identity = 92/204 (45.10%), Postives = 117/204 (57.35%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TAIR10
Match: AT5G46280.1 (AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein) HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06 Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 1
BLAST of CmoCh14G001800 vs. TAIR10
Match: AT1G44900.1 (AT1G44900.1 minichromosome maintenance (MCM2/3/5) family protein) HSP 1 Score: 49.3 bits (116), Expect = 3.7e-06 Identity = 23/58 (39.66%), Postives = 39/58 (67.24%), Query Frame = 1
BLAST of CmoCh14G001800 vs. NCBI nr
Match: gi|449440379|ref|XP_004137962.1| (PREDICTED: probable DNA helicase MCM8 isoform X1 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37 Identity = 97/146 (66.44%), Postives = 105/146 (71.92%), Query Frame = 1
BLAST of CmoCh14G001800 vs. NCBI nr
Match: gi|778683749|ref|XP_011651938.1| (PREDICTED: probable DNA helicase MCM8 isoform X3 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37 Identity = 97/146 (66.44%), Postives = 105/146 (71.92%), Query Frame = 1
BLAST of CmoCh14G001800 vs. NCBI nr
Match: gi|659083981|ref|XP_008442643.1| (PREDICTED: probable DNA helicase MCM8 isoform X2 [Cucumis melo]) HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37 Identity = 97/146 (66.44%), Postives = 105/146 (71.92%), Query Frame = 1
BLAST of CmoCh14G001800 vs. NCBI nr
Match: gi|778683747|ref|XP_011651937.1| (PREDICTED: probable DNA helicase MCM8 isoform X2 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37 Identity = 97/146 (66.44%), Postives = 105/146 (71.92%), Query Frame = 1
BLAST of CmoCh14G001800 vs. NCBI nr
Match: gi|659083977|ref|XP_008442641.1| (PREDICTED: probable DNA helicase MCM8 isoform X1 [Cucumis melo]) HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36 Identity = 106/206 (51.46%), Postives = 124/206 (60.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |