CmoCh14G001680 (gene) Cucurbita moschata (Rifu)

NameCmoCh14G001680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr14 : 754405 .. 759450 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGGCTGCTAGAATTCGTCCGGAAGGGGTAAATATATTCATGAATGCGACTACGAATGAAAAAGGAGTTTGATATTTAGCTCTGCTGGTGGGTAATAAGGGATTATTTAGTTCATAATAGTATATGATTCAAGAGTTCCAGATTACATTTCTGACATGAGAGAAAGGTAGGCGGCGAGTTGAATGGTTACTTAACTTAATAGATTTGTAGCCTGATGAAGATGGTTATATGTCGTTAGTTGAGAGCTAGACAACACTGCAGCTTGTAGGCTTCGTTCATTTCGGATTCCCAAAGGATGCCGAAAATGGACCCAGATCGAAGCATCGTTAATCCCCACAAAAGCATTACTTTATGCTCTGTATAATTGTAAGGTGATTTCGGAAGGCACTTTAGTATTTCTTTCAACGGAGGTGGGTGACACTTTCACTTTCAAAAGTAAGAATCGTGAGTTTGTGATTTTCTTTCTACCATTTTCGGTAAGTTCATCTAACTGTTTGAGATCATAACAGTGCTGTTGTGTTCCGTGCTTCAGATATCTCAATCACGATGCCTTCAGTTGAAACCACTCAACTTCCCTCAAGCTGCATCTTGCAGGTATGAAAGGAAAATTGCTAATATTAAATTCTTTCGTACAACTGCCTTGAAGCTTTATAAAATAAATGTAGTGATTTAGCTCAGTATAGCTGACAATAATATTTCATATTAAATAGTAGCTTGTTCACTGAATCCTTTACTTAGTATACTTCATTGCTTCTGACTCGTTACTTTTCTCTTGATACTCTGTTTCACCATTTAGCCTACATGTGTTCAATTTCATTTCTTTTTGTCACAAAAATCTATATAAATTGAACTACCTGAACACATACAAACAGATACGAATAGATATTCATGCATTTTTGGATTCGAGAGGTGTAAAATTCAATCAAAGGAAAAAAGGGACATCAGGGGTCAACATTTCAAGGTAGTAAACTATATTTCACACCCTACCACTTGTGTAGCAATCAAATTAGATTAGAACCGAACATAATAGAGAAATATGTAGCCTATTGATCCTTAGAACTAAGTGAGAAAAGATCCGAAAGAAAAAGCTCAAGCTCCTTAATGTTCACCTCCTTCTTGAGACGGTAAAACCCTACCCCAAGGTTAACCCTTATGCCACCAATTACTCAAGACAGTAAAATAAAAATCCTACCTAAGGTCAAAAGTTGTTTTGTAGATTAGTTGCGGTACACCTAAGCTCACCTACAGACTTGTAGACGACCATAGGTATATATAGTGTCAACTAAACTTTAAAAAGATTAATAGATCTCCAAAATCTCAAATTTAGGACACATGGGAAGAGCAATGATCTGTCTAACCACGTGAACGTAACACTTCCCTCATCAAAATGAAACTTTTGCCCATAACACAAAGCTAAGCTGGGAAATTGGGGAGAAGAGGTTGCAGGGAGAGAGAAAGAGAGAGAGAGAGAGAGTAGAAATATGATTGGATCTTGTGGAATTCCACCGGCTTTGACGAAAGAGTGTTAGGTTGGTTGGTACAAAAGGAAGAGCCATGGATGGGCCACGCTTCCCTTGACTCTTCTCTGCTTGTTTTGTTGCGTATCACAGATAAAAAAGGCAATGACTATCAGCTTATGGAAAAAGGAAGTGAATAACAGGTTGGATTTGGCCCTTTCTTCTGGCTAATTAAATTATAATTTCCTTCTCCCCTATTTTTTTTATTTTTATTTTTATATCCATCTTTATTAGGAGCATTTATTTAGTGTTCTTGGATTGTAGCTGGTGCTCTTATTTTTATAATCATTAGAGAAAGAGAGGAGTTTATCTAATGACCATGTCCAAATTGAAACCTAAATAGTATGCTAAAGGAAGCAGCTATCTTCTTGTCATGGTGGTGGATTTGGAGATGGGCCTGATAGAAAAGCCCATCAGGCCCAACCCAAATTAAAACTAACAAAACGGATATATTACTTTGTTTGATTAAAAAATTTTAAATGTTCTTATACTTTTAAATATCTAATTGAATTCACGTGCTTTCGATTTCAAGAAAAGAGGGCACCAACACGAGTGCTTGTGAGCTCAAACCAAGACATCCACCAAACAACTGTAGACCAGAGCTTTGTAGTCAAATTCAAACTCATAATTGTTTTTTTTTTTTCTTTTAATTTTTAAATTTTTTTAAATGCTTTAAAAGAGAAGGTGAAACATCCCATATTGCCTCCAAAACCAAGCTTCCTTTGAGACATGAGACCTCAACACCATCCTATATTAACTAATTTATATTAATTTAAATCGAGATTGTTATATAAAGGTTAAAATATTTTTCTTTTTCAATTTTTTATGTTTAATCCTTACATTTTCAATAAATCTAAAAATTAGATTTTATTATTAGTTTGAACTTTGAAGTTAATTTTATCTAAATTGGTTAAATAATAATAGTAATATCTTGATTTGAAGGAAAACTAATAAGATTCTTTTTAAAATATAATTAATTATATAGACTGACTTTAATATTATTTAAAAACATATAAAAACAGAAACCTAAATCTAACTCTAAATTTTGCTCAAACTCTTTAGACTTCCCTTCAATAATGAAATCTAGATTATTATTTAAATAAAATGTTCAATCTTGAATGACAACTCTTTTCATGAAAGTATATTAAGTACTATAAGAGTATGAATACTTCTTTCATTTATTATCTGTCATGTTAGCATTCATTTAAAAATGACGTGAGGTTTACTAATTGAAAAAATATATTATTATAATGTAAGAAAAGGAAGTATGATCATATTTTCTCGACGAAAGACGTGTACAAAAGGCTAAATATTTACATAATAGAAAAGGAAAAGGAGGGGAGGGGGGGTCTAACAGGACAATATGATCAATCAGATCCAGACATAATGCTAGGGAACATCTATAAGCTGATCTCAGAAACAGGGTCTTGTGCATGTACCACTCATTTTGGTTGGTGCAGTGTTCACATCACTTCCAAAAGAAAATTAGACTTTTTGTTAATAAAATATTCAAATAAAAATACTTTCCAAATAAATGAAAATGCATTTAAATTCGTTATTTTTATCCTTTAAAGAGAGGGTAAAAAAGATTTTTCCTTAGAGCCAATAATTTCCCATCCTTTTTGTTGAAACAGCTATGGCAATGCTTTTCCAAATCTTAGACAAATTTCACAATTGGGTTTTGATGAGATTTTGTTTGTTGATTGATCAGAAAATTCTGCATTATCGATTTGGTATAATATTTACAAGACATAAAAATTTAAGGAATAATTAATCCATCACCTGAAAAAAGAAAAGTTCTAATTTTATGCCAACTTCCTTATAAAGGAGGAATAAAAAAAAAAACTTTCATCCCCAACAACATTTATCTTTTCCCCTTTTTTCAAAAAAGAAATTATGTCAACTCATCTGTCAATTTCTATATTTACTTATAGTGAAGAAATCATTTTTTAAAAAAATAATAGGCGAAAATTAGACAAATAAAATAAAATAAAATAAAGGAAAAAATTAGAGTGAGAGAGAGACTCATTTATGTCGGTTAACAACTTACAAAGTAGGATTTGAAGAAACCCTATAATAAATAACAGTGAACTCATCCTATCCTATACCATCAAAAAAATTCTTCTTATTGGTTGCCACCCAAGACTTTTGATTGAAAAGAAATCAAGATTTTCCTAGAAGTTGCAACTAATTGCTGTTTTATATTTAGTTTTTTCAGTCAATTGGTATGAAAATTTAAAAAAAATAAGAACAATGGGTCTCAGATGCATGGGAAAATGTTTAAATTTAATCTTTTATAACTCCCCAACTTCAACCTTAGATTTGTTCTATGTTAGGACACACTATTGGAAAGAAATGAATTATATTGACAAACATATCCATGTATCTATGTATCTAAATATGTTAATAAAACAATAATGTAATAACATTTGTAATAATGGGGTTAAGTAAAAATTGTAAATTACATAAAGGTTAATTGTTTGATAATAACCAAATTTATAAGTAGTTGATAACGACACTGGAATCTGTAGTATGAGTTTTGATTGACAAATTATGAGCTTTGTAATTGACAGAATATAATTCCCCACTCTTATCCTTTTCCCTTTTAGCTTATTTCTCTCTCTTTCATAATTGCTTGGCCATGCTGACAGCTATGCAATTCCATTTCAGATTTAATTTCACAACCACTTTATTGTTGCTTTGTAATGGAGATACAGTTTTTAGAATTTCAGAATTTTTTTTCTTTGCAGTTTTATTCAATCTTTTATTAATTGAGGCAAAAGGCTCACTTAAACAATTCCTTTATTTTGCTAATTGAGGCTTAGATCAGCTCATTAATGTCTAATCTCTCTACCATGCCAAAGGAGAAAGACACAAATGCTGAATCCCACTTCAAAAAAGTCTACCTAAAAAAATGAATAGAAATTACTACAAGGCAAGGCAAAGTAGATTGCTGGATTTACAAGGAATGAAATTCCAAATGCAGATCAGAAATGTGGAGGTAGTTTTTACAGTAAGAAAAAGGAGGAGGGGGGGTGCTTTTCTGATTTAGATTAGGAAAAATTGCCTGAAATGGTGGGTTGTGGCTGATGGTAAGGTGATTAGAAATGGTGGGTTTTGCTCATAAATTTCAGTTGGAGCTTTTTTATAATTGCAGTGCAGACATGAAGTGGCGGAAGGCCCCAAACCCATAAAAAAAGCCCACCACTTGTCTATAAAAATACAGAAAAAGAGTAAAAGGCAGAGAGAAAACAGAGAAGGGAGGGAGACTGGGGATTGGGGAGGGACAACAATGTCAGATTTGTAGTTTGTTTAGTGTGTTTTTATTATCCCCATGCTAGATCGCATACGATAGAAAGAAAAAAGAGAAAACAAAACAAAAGAGAAACAGAGAAAGAAAGAGAAACTAACCCGGTGGATCCTCTGTGGAAAAGCAAGCTTCCAAAAACCCTCAGTGATTCAATCGGCTGACTCTCCCCTTTTGATCACTCTGATCTCAGACCAAACGCTGCCACTTTCTTAA

mRNA sequence

ATGTTGAAGGCTGCTAGAATTCGTCCGGAAGGGGTGATTTCGGAAGGCACTTTAGTATTTCTTTCAACGGAGGTGGGTGACACTTTCACTTTCAAAAATATCTCAATCACGATGCCTTCAGTTGAAACCACTCAACTTCCCTCAAGCTGCATCTTGCAGAAAGAAAAAAGAGAAAACAAAACAAAAGAGAAACAGAGAAAGAAAGAGAAACTAACCCGGTGGATCCTCTGTGGAAAAGCAAGCTTCCAAAAACCCTCAGTGATTCAATCGGCTGACTCTCCCCTTTTGATCACTCTGATCTCAGACCAAACGCTGCCACTTTCTTAA

Coding sequence (CDS)

ATGTTGAAGGCTGCTAGAATTCGTCCGGAAGGGGTGATTTCGGAAGGCACTTTAGTATTTCTTTCAACGGAGGTGGGTGACACTTTCACTTTCAAAAATATCTCAATCACGATGCCTTCAGTTGAAACCACTCAACTTCCCTCAAGCTGCATCTTGCAGAAAGAAAAAAGAGAAAACAAAACAAAAGAGAAACAGAGAAAGAAAGAGAAACTAACCCGGTGGATCCTCTGTGGAAAAGCAAGCTTCCAAAAACCCTCAGTGATTCAATCGGCTGACTCTCCCCTTTTGATCACTCTGATCTCAGACCAAACGCTGCCACTTTCTTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G001680.1CmoCh14G001680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 52..72
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G001680Cucurbita moschata (Rifu)cmocmoB209
CmoCh14G001680Cucurbita moschata (Rifu)cmocmoB211
CmoCh14G001680Cucurbita moschata (Rifu)cmocmoB216
CmoCh14G001680Cucurbita moschata (Rifu)cmocmoB222
CmoCh14G001680Cucurbita moschata (Rifu)cmocmoB228
CmoCh14G001680Cucumber (Gy14) v1cgycmoB0095
CmoCh14G001680Cucumber (Gy14) v1cgycmoB0837
CmoCh14G001680Cucurbita maxima (Rimu)cmacmoB244
CmoCh14G001680Cucurbita maxima (Rimu)cmacmoB544
CmoCh14G001680Cucurbita maxima (Rimu)cmacmoB792
CmoCh14G001680Cucurbita maxima (Rimu)cmacmoB848
CmoCh14G001680Wild cucumber (PI 183967)cmocpiB230
CmoCh14G001680Wild cucumber (PI 183967)cmocpiB254
CmoCh14G001680Cucumber (Chinese Long) v2cmocuB227
CmoCh14G001680Cucumber (Chinese Long) v2cmocuB249
CmoCh14G001680Melon (DHL92) v3.5.1cmomeB215
CmoCh14G001680Melon (DHL92) v3.5.1cmomeB237
CmoCh14G001680Watermelon (Charleston Gray)cmowcgB207
CmoCh14G001680Watermelon (Charleston Gray)cmowcgB211
CmoCh14G001680Watermelon (Charleston Gray)cmowcgB214
CmoCh14G001680Watermelon (97103) v1cmowmB214
CmoCh14G001680Watermelon (97103) v1cmowmB236
CmoCh14G001680Watermelon (97103) v1cmowmB237
CmoCh14G001680Cucurbita pepo (Zucchini)cmocpeB229
CmoCh14G001680Cucurbita pepo (Zucchini)cmocpeB240
CmoCh14G001680Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G001680Cucurbita pepo (Zucchini)cmocpeB253
CmoCh14G001680Cucurbita pepo (Zucchini)cmocpeB259
CmoCh14G001680Bottle gourd (USVL1VR-Ls)cmolsiB230
CmoCh14G001680Bottle gourd (USVL1VR-Ls)cmolsiB215
CmoCh14G001680Bottle gourd (USVL1VR-Ls)cmolsiB218
CmoCh14G001680Bottle gourd (USVL1VR-Ls)cmolsiB232
CmoCh14G001680Cucumber (Gy14) v2cgybcmoB279
CmoCh14G001680Cucumber (Gy14) v2cgybcmoB458
CmoCh14G001680Cucumber (Gy14) v2cgybcmoB572
CmoCh14G001680Melon (DHL92) v3.6.1cmomedB222
CmoCh14G001680Melon (DHL92) v3.6.1cmomedB244
CmoCh14G001680Silver-seed gourdcarcmoB0214
CmoCh14G001680Silver-seed gourdcarcmoB0417
CmoCh14G001680Silver-seed gourdcarcmoB1335
CmoCh14G001680Cucumber (Chinese Long) v3cmocucB0270
CmoCh14G001680Cucumber (Chinese Long) v3cmocucB0295
CmoCh14G001680Watermelon (97103) v2cmowmbB239
CmoCh14G001680Watermelon (97103) v2cmowmbB230
CmoCh14G001680Watermelon (97103) v2cmowmbB236
CmoCh14G001680Wax gourdcmowgoB0287