CmoCh13G011930 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G011930
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-binding protein
LocationCmo_Chr13 : 9431658 .. 9432317 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTTGTTCACCCTTTCACTCTCTCGCAAATGGCACCCATTGATGAGCTTGATTACGCTAACCCCATTTCAGTTTTTCAGATTTTGTTTCTGTTTTTTCTCAATTTCCTACTTGAATACTTGTTTCCAGGTCCCTTGTACGTTTTCATGCTCTGTGCCGCCTTCCATTTTTATCTGTGGAATTCATGGGTTGCCCACCGCAACATCATCAAACGCTTTGAGGCTTCTGATGGTGCGACATGCACACCAAGTGCTCGACGGAATGCTCATGTGGGGCATTGCTACACAGGAATTGTGGGCATGCCTGTTAATGACGCACATGAAGTGAAACTAACCATTGAAGATGTGAAAACTATGATGGAGGCACTCCATAACAACATGGAAACTAATAACCTTGAGTTGAAGGCTGAGATTGAGGGGGTATTTGAGGAAGAATTGAGTGTAGGGGAAGTTAAGGAAGCTTTTGATTTGTTTGATGAGAATGGTGATGGGTTTATTGATGCAGAGGACTTGAAGAAAGTGTTGGATGCCATGGGATTTACAGTGGCTTCAGAAGTTGATGAATGCAGGAGAATGATAAGTGGATATGACAAGAATGGAGATGGGCGTTTAGATTTTGAAGAATTTGCTAAGCTTGTTGAACAGAGTTTTTGTTGA

mRNA sequence

ATGCTACTTGTTCACCCTTTCACTCTCTCGCAAATGGCACCCATTGATGAGCTTGATTACGCTAACCCCATTTCAGTTTTTCAGATTTTGTTTCTGTTTTTTCTCAATTTCCTACTTGAATACTTGTTTCCAGGTCCCTTGTACGTTTTCATGCTCTGTGCCGCCTTCCATTTTTATCTGTGGAATTCATGGGTTGCCCACCGCAACATCATCAAACGCTTTGAGGCTTCTGATGGTGCGACATGCACACCAAGTGCTCGACGGAATGCTCATGTGGGGCATTGCTACACAGGAATTGTGGGCATGCCTGTTAATGACGCACATGAAGTGAAACTAACCATTGAAGATGTGAAAACTATGATGGAGGCACTCCATAACAACATGGAAACTAATAACCTTGAGTTGAAGGCTGAGATTGAGGGGGTATTTGAGGAAGAATTGAGTGTAGGGGAAGTTAAGGAAGCTTTTGATTTGTTTGATGAGAATGGTGATGGGTTTATTGATGCAGAGGACTTGAAGAAAGTGTTGGATGCCATGGGATTTACAGTGGCTTCAGAAGTTGATGAATGCAGGAGAATGATAAGTGGATATGACAAGAATGGAGATGGGCGTTTAGATTTTGAAGAATTTGCTAAGCTTGTTGAACAGAGTTTTTGTTGA

Coding sequence (CDS)

ATGCTACTTGTTCACCCTTTCACTCTCTCGCAAATGGCACCCATTGATGAGCTTGATTACGCTAACCCCATTTCAGTTTTTCAGATTTTGTTTCTGTTTTTTCTCAATTTCCTACTTGAATACTTGTTTCCAGGTCCCTTGTACGTTTTCATGCTCTGTGCCGCCTTCCATTTTTATCTGTGGAATTCATGGGTTGCCCACCGCAACATCATCAAACGCTTTGAGGCTTCTGATGGTGCGACATGCACACCAAGTGCTCGACGGAATGCTCATGTGGGGCATTGCTACACAGGAATTGTGGGCATGCCTGTTAATGACGCACATGAAGTGAAACTAACCATTGAAGATGTGAAAACTATGATGGAGGCACTCCATAACAACATGGAAACTAATAACCTTGAGTTGAAGGCTGAGATTGAGGGGGTATTTGAGGAAGAATTGAGTGTAGGGGAAGTTAAGGAAGCTTTTGATTTGTTTGATGAGAATGGTGATGGGTTTATTGATGCAGAGGACTTGAAGAAAGTGTTGGATGCCATGGGATTTACAGTGGCTTCAGAAGTTGATGAATGCAGGAGAATGATAAGTGGATATGACAAGAATGGAGATGGGCGTTTAGATTTTGAAGAATTTGCTAAGCTTGTTGAACAGAGTTTTTGTTGA
Homology
[Close]
BLAST of CmoCh13G011930 vs. Swiss-Prot
Match: CML45_ARATH (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana GN=CML45 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17
Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 1 

Query: 97  TGIVGMPVNDAHEVKLTIEDVKTMMEALHNNMETNNLELKA-----EIEGVFEE-ELSVG 156
           T I      D  +  L  EDV  +M++L  + +  N  L+      E+  +FEE E S+ 
Sbjct: 76  TSIKHEEYRDDDDDGLCREDVGMVMKSLGLSTDQENEGLQKQYSSKEVSNLFEEKEPSLE 135

Query: 157 EVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEF 216
           EVK+AFD+FDEN DGFID  DL++VL  +G    S ++ CRRMI  +D + DGR+DF  F
Sbjct: 136 EVKQAFDVFDENRDGFIDPIDLQRVLTILGLKQGSNLENCRRMIRSFDGSKDGRIDFYGF 195

Query: 217 AKLVEQSFC 220
            K +E +FC
Sbjct: 196 VKFMENNFC 204

[Close]
BLAST of CmoCh13G011930 vs. Swiss-Prot
Match: CML30_ARATH (Probable calcium-binding protein CML30 OS=Arabidopsis thaliana GN=CML30 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-17
Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 1 

Query: 105 NDAHEVKLTIEDVKTMMEAL---HNNMETNNLELKAEIEGVFEE-ELSVGEVKEAFDLFD 164
           +D  ++ ++ E+ + +M +L   +N+ +        E+  +FEE E S+ EVK+AFD+FD
Sbjct: 76  DDDDDIDISREEAEMVMRSLGLFYNDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFDVFD 135

Query: 165 ENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSF 219
           EN DGFIDA +L++VL  +GF   S +D C  MI   D N DG++DF EF K +E SF
Sbjct: 136 ENKDGFIDAIELQRVLTILGFKQGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFMETSF 193

[Close]
BLAST of CmoCh13G011930 vs. Swiss-Prot
Match: CML47_ARATH (Probable calcium-binding protein CML47 OS=Arabidopsis thaliana GN=CML47 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-15
Identity = 66/208 (31.73%), Postives = 107/208 (51.44%), Query Frame = 1 

Query: 15  IDELDYANPISVFQI-LFLFFLNFLLEYLFPGPLYVFMLCAAFHFYLWNSWVAHRNIIKR 74
           +++    +PIS+  I +FLF LN ++        + F     FH +  N+++   +I   
Sbjct: 1   MEDSSLLSPISLLTIVIFLFILNLMMIIQDFSSSFPFR----FHLFFSNAYILFTSI--- 60

Query: 75  FEASDGATCTPSARRNAHVGHCYTGIVGMPVNDAHEVKLTIEDVKTMM---EALHNNMET 134
                         RN         I  + V +  ++K ++E+VK ++   EAL+  +  
Sbjct: 61  --------------RNNKQNTELPIIKKVVVPNRADIKTSVEEVKAIIDDSEALYECLIE 120

Query: 135 NNLELKAEIEGVFEEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDEC 194
              E   E   +  +E+    VKEAF LFDEN DGFID  +LK VL  +G+   +++ EC
Sbjct: 121 EGEEYLLEKNEMMGKEI----VKEAFRLFDENQDGFIDENELKHVLSLLGYDECTKM-EC 180

Query: 195 RRMISGYDKNGDGRLDFEEFAKLVEQSF 219
           R+M+  YD+N DG++DF EF KL+E+SF
Sbjct: 181 RKMVKVYDENRDGKIDFYEFVKLIEKSF 182

[Close]
BLAST of CmoCh13G011930 vs. Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 31/63 (49.21%), Postives = 48/63 (76.19%), Query Frame = 1 

Query: 152 VKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFA 211
           ++EAF++FD+NGDGFI  ++L+ VL ++G       D+CRRMIS  D +GDGR+DF+EF 
Sbjct: 100 MREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFK 159

Query: 212 KLV 215
           +++
Sbjct: 160 QMM 162

[Close]
BLAST of CmoCh13G011930 vs. Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 1 

Query: 144 EEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDG 203
           EEE   G+++EAF +FD NGDG+I  ++L  VL ++G       +ECRRMI   D++GDG
Sbjct: 171 EEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDG 230

Query: 204 RLDFEEFAKLV 215
           R+DF EF +++
Sbjct: 231 RVDFHEFLQMM 241

[Close]
BLAST of CmoCh13G011930 vs. TrEMBL
Match: A0A0A0LTE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033260 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.2e-64
Identity = 140/215 (65.12%), Postives = 160/215 (74.42%), Query Frame = 1 

Query: 12  MAPIDELDYANPISVFQILFLFFLNFLLEYLFPGPLYVFMLCAAFHFYLWNSWVAHRNII 71
           M PID +DY NPISVF ILFLFFLNF+L   FPG   +F+L AAF FYLWNSWVA R+II
Sbjct: 1   MEPIDVVDYTNPISVFHILFLFFLNFILGRFFPGLFNIFILSAAFIFYLWNSWVAQRSII 60

Query: 72  KRFEASDGATCTPSARRNAHVGH-CYTGIVGMPVND--AHEVKLTIEDVKTMMEAL---H 131
                      TPS RRN H  H C T IVGM VND    + KL+IEDVKTMME L   H
Sbjct: 61  -----------TPSVRRNDHEEHCCCTKIVGMLVNDKRVEQAKLSIEDVKTMMEVLDHEH 120

Query: 132 NNMETNNLELKAEIEGVFEEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMG-FTVA 191
           NN   ++     E+EG+FEEE+S+GEVKEAFDLFDENGDGFIDAEDLKKVL  +G  TV 
Sbjct: 121 NNNNRDSDSDNLELEGMFEEEVSLGEVKEAFDLFDENGDGFIDAEDLKKVLCGLGLITVG 180

Query: 192 SEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSFC 220
           S++DEC+RM+SG+D +GDGRLDFEEFAKLVEQSFC
Sbjct: 181 SDIDECKRMLSGFDNDGDGRLDFEEFAKLVEQSFC 204

[Close]
BLAST of CmoCh13G011930 vs. TrEMBL
Match: M5WTA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024931mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 1 

Query: 105 NDAHEVK-LTIEDVKTMMEALHNNMETNNLEL------KAEIEGVFEEELSVGEVKEAFD 164
           ND  + K L   ++  MME L    + +  E+        EI  +FEEE S+ EVKEAF 
Sbjct: 88  NDVDDKKQLCTGELGQMMEKLGTLFDADGGEVVEGRLGSKEIADLFEEEPSLEEVKEAFH 147

Query: 165 LFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQS 220
           +FDEN DGFIDA ++ KVL A+GF  ASEV EC+RMI  +D NGDG++DF EF +L+E+S
Sbjct: 148 VFDENKDGFIDAGEINKVLCALGFVGASEV-ECKRMIKAFDHNGDGQIDFNEFVQLMEKS 207

[Close]
BLAST of CmoCh13G011930 vs. TrEMBL
Match: A0A161WUC2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011089 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18
Identity = 54/113 (47.79%), Postives = 80/113 (70.80%), Query Frame = 1 

Query: 112 LTIEDVKTMMEALHNNMETNNLELKA-----EIEGVFEE-ELSVGEVKEAFDLFDENGDG 171
           L+ EDV+T+M+ L    +  +L L+      E   +FEE E S+ EV+EAFD+FDEN DG
Sbjct: 85  LSREDVETVMQNLGLFYQPEDLNLQGRFSSDEFINMFEENEASLDEVREAFDVFDENRDG 144

Query: 172 FIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSF 219
           FIDA +++KV+ A+G    SE++ C+ MIS +D+NGDGR+DF+EF +L+ +SF
Sbjct: 145 FIDAREVQKVVRALGLNENSEMENCKMMISEFDENGDGRIDFQEFVRLMNESF 197

[Close]
BLAST of CmoCh13G011930 vs. TrEMBL
Match: W9QJD1_9ROSA (Putative calcium-binding protein CML45 OS=Morus notabilis GN=L484_008596 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18
Identity = 57/119 (47.90%), Postives = 80/119 (67.23%), Query Frame = 1 

Query: 100 VGMPVNDAHEVKLTIEDVKTMMEALHNNMETNNLELKAEIEGVFEEELSVGEVKEAFDLF 159
           V +P    +E KL IE+VK  ME L    E N  +     E +FEEE+S+ EV+EAFD+F
Sbjct: 59  VSLPKKIDNEKKLCIEEVKDAMEKL---AEKNLCD-----EELFEEEVSLEEVREAFDVF 118

Query: 160 DENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSF 219
           DEN DGFIDA ++++VL A+G    SE D C+ MI  +D++GD ++DF+EF K++E SF
Sbjct: 119 DENKDGFIDAGEVQRVLCALGSVETSEKD-CKSMIKAFDRDGDEKIDFKEFVKIMEDSF 168

[Close]
BLAST of CmoCh13G011930 vs. TrEMBL
Match: A0A078FNC8_BRANA (BnaA04g11660D protein OS=Brassica napus GN=BnaA04g11660D PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.7e-18
Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 1 

Query: 82  CTPSARRNAHVGHCYTGIVGMPVNDAHEVKLTIEDVKTMMEALHNNMETNNLELKA---- 141
           C P  +   +V    +  + +  +  H+  L IED + +M++L    +  +L L+     
Sbjct: 53  CCPLLQHQQYVSEKKSKNLEVQSSITHDDGLCIEDAEMVMQSLGLITDPESLGLQKRYTA 112

Query: 142 -EIEGVFEE-ELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMIS 201
            E+  +FEE E S+ EVK+AFD+FDEN DGF+D  DL++VL  +G    S +D CRRMIS
Sbjct: 113 EELSNLFEEKEPSLEEVKQAFDVFDENRDGFLDPVDLQRVLTILGLKQGSNLDNCRRMIS 172

Query: 202 GYDKNGDGRLDFEEFAKLVEQSFC 220
            +D N DGR+DF  F K +E + C
Sbjct: 173 SFDGNKDGRIDFHGFVKFMENNLC 196

[Close]
BLAST of CmoCh13G011930 vs. TAIR10
Match: AT5G39670.1 (AT5G39670.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 1 

Query: 97  TGIVGMPVNDAHEVKLTIEDVKTMMEALHNNMETNNLELKA-----EIEGVFEE-ELSVG 156
           T I      D  +  L  EDV  +M++L  + +  N  L+      E+  +FEE E S+ 
Sbjct: 76  TSIKHEEYRDDDDDGLCREDVGMVMKSLGLSTDQENEGLQKQYSSKEVSNLFEEKEPSLE 135

Query: 157 EVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEF 216
           EVK+AFD+FDEN DGFID  DL++VL  +G    S ++ CRRMI  +D + DGR+DF  F
Sbjct: 136 EVKQAFDVFDENRDGFIDPIDLQRVLTILGLKQGSNLENCRRMIRSFDGSKDGRIDFYGF 195

Query: 217 AKLVEQSFC 220
            K +E +FC
Sbjct: 196 VKFMENNFC 204

[Close]
BLAST of CmoCh13G011930 vs. TAIR10
Match: AT3G29000.1 (AT3G29000.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 1 

Query: 105 NDAHEVKLTIEDVKTMMEAL---HNNMETNNLELKAEIEGVFEE-ELSVGEVKEAFDLFD 164
           +D  ++ ++ E+ + +M +L   +N+ +        E+  +FEE E S+ EVK+AFD+FD
Sbjct: 76  DDDDDIDISREEAEMVMRSLGLFYNDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFDVFD 135

Query: 165 ENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSF 219
           EN DGFIDA +L++VL  +GF   S +D C  MI   D N DG++DF EF K +E SF
Sbjct: 136 ENKDGFIDAIELQRVLTILGFKQGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFMETSF 193

[Close]
BLAST of CmoCh13G011930 vs. TAIR10
Match: AT3G47480.1 (AT3G47480.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 66/208 (31.73%), Postives = 107/208 (51.44%), Query Frame = 1 

Query: 15  IDELDYANPISVFQI-LFLFFLNFLLEYLFPGPLYVFMLCAAFHFYLWNSWVAHRNIIKR 74
           +++    +PIS+  I +FLF LN ++        + F     FH +  N+++   +I   
Sbjct: 1   MEDSSLLSPISLLTIVIFLFILNLMMIIQDFSSSFPFR----FHLFFSNAYILFTSI--- 60

Query: 75  FEASDGATCTPSARRNAHVGHCYTGIVGMPVNDAHEVKLTIEDVKTMM---EALHNNMET 134
                         RN         I  + V +  ++K ++E+VK ++   EAL+  +  
Sbjct: 61  --------------RNNKQNTELPIIKKVVVPNRADIKTSVEEVKAIIDDSEALYECLIE 120

Query: 135 NNLELKAEIEGVFEEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDEC 194
              E   E   +  +E+    VKEAF LFDEN DGFID  +LK VL  +G+   +++ EC
Sbjct: 121 EGEEYLLEKNEMMGKEI----VKEAFRLFDENQDGFIDENELKHVLSLLGYDECTKM-EC 180

Query: 195 RRMISGYDKNGDGRLDFEEFAKLVEQSF 219
           R+M+  YD+N DG++DF EF KL+E+SF
Sbjct: 181 RKMVKVYDENRDGKIDFYEFVKLIEKSF 182

[Close]
BLAST of CmoCh13G011930 vs. TAIR10
Match: AT4G03290.1 (AT4G03290.1 EF hand calcium-binding protein family)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13
Identity = 31/73 (42.47%), Postives = 53/73 (72.60%), Query Frame = 1 

Query: 144 EEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDG 203
           E+E+   ++KEAF++FD NGDGFI  ++LK VL ++G      ++ECR+MI   D +GDG
Sbjct: 74  EDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDG 133

Query: 204 RLDFEEFAKLVEQ 217
           R+++ EF +++++
Sbjct: 134 RVNYMEFRQMMKK 146

[Close]
BLAST of CmoCh13G011930 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-13
Identity = 30/72 (41.67%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 144 EEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDG 203
           EE+    ++KEAF++FD+NGDGFI  ++LK VL ++G      +D+C++MI   D +GDG
Sbjct: 72  EEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDG 131

Query: 204 RLDFEEFAKLVE 216
           R++++EF ++++
Sbjct: 132 RVNYKEFRQMMK 143

[Close]
BLAST of CmoCh13G011930 vs. NCBI nr
Match: gi|659068733|ref|XP_008445901.1| (PREDICTED: probable calcium-binding protein CML30 [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 5.2e-76
Identity = 149/212 (70.28%), Postives = 172/212 (81.13%), Query Frame = 1 

Query: 12  MAPIDELDYANPISVFQILFLFFLNFLLEYLFPGPLYVFMLCAAFHFYLWNSWVAHRNII 71
           MAP D +DY NPISVF IL LFFLNF+LE  FPG  Y+F+L AAF FYLWNSW A RNII
Sbjct: 1   MAPTDVIDYTNPISVFHILCLFFLNFILERFFPGLFYIFILYAAFLFYLWNSWAAQRNII 60

Query: 72  KRFEASDGATCTPSARRNAHVGHCYTGIVGMPVNDAHEVKLTIEDVKTMMEAL----HNN 131
           +R EA+D  TCTPS R+N H  HC T IVG PVND  EVKL+IEDVKTMME L    +NN
Sbjct: 61  RRLEAAD-VTCTPSVRQNDHEEHCCTKIVGTPVNDKREVKLSIEDVKTMMETLDHEHNNN 120

Query: 132 METNNLELKAEIEGVFEEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEV 191
            +++NL L AE+E +FEEELS+GEV+EAFDLFDEN DGFIDAEDL+KVL  +GF VAS++
Sbjct: 121 RDSDNLGLSAELEEMFEEELSLGEVQEAFDLFDENDDGFIDAEDLEKVLCGLGFAVASDI 180

Query: 192 DECRRMISGYDKNGDGRLDFEEFAKLVEQSFC 220
           D+C+ MISG+D NGDGRLDFEEFAKLVEQSFC
Sbjct: 181 DQCKTMISGFDNNGDGRLDFEEFAKLVEQSFC 211

[Close]
BLAST of CmoCh13G011930 vs. NCBI nr
Match: gi|449439625|ref|XP_004137586.1| (PREDICTED: probable calcium-binding protein CML47 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 6.0e-64
Identity = 140/215 (65.12%), Postives = 160/215 (74.42%), Query Frame = 1 

Query: 12  MAPIDELDYANPISVFQILFLFFLNFLLEYLFPGPLYVFMLCAAFHFYLWNSWVAHRNII 71
           M PID +DY NPISVF ILFLFFLNF+L   FPG   +F+L AAF FYLWNSWVA R+II
Sbjct: 1   MEPIDVVDYTNPISVFHILFLFFLNFILGRFFPGLFNIFILSAAFIFYLWNSWVAQRSII 60

Query: 72  KRFEASDGATCTPSARRNAHVGH-CYTGIVGMPVND--AHEVKLTIEDVKTMMEAL---H 131
                      TPS RRN H  H C T IVGM VND    + KL+IEDVKTMME L   H
Sbjct: 61  -----------TPSVRRNDHEEHCCCTKIVGMLVNDKRVEQAKLSIEDVKTMMEVLDHEH 120

Query: 132 NNMETNNLELKAEIEGVFEEELSVGEVKEAFDLFDENGDGFIDAEDLKKVLDAMG-FTVA 191
           NN   ++     E+EG+FEEE+S+GEVKEAFDLFDENGDGFIDAEDLKKVL  +G  TV 
Sbjct: 121 NNNNRDSDSDNLELEGMFEEEVSLGEVKEAFDLFDENGDGFIDAEDLKKVLCGLGLITVG 180

Query: 192 SEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSFC 220
           S++DEC+RM+SG+D +GDGRLDFEEFAKLVEQSFC
Sbjct: 181 SDIDECKRMLSGFDNDGDGRLDFEEFAKLVEQSFC 204

[Close]
BLAST of CmoCh13G011930 vs. NCBI nr
Match: gi|1009124977|ref|XP_015879362.1| (PREDICTED: probable calcium-binding protein CML30 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 116.3 bits (290), Expect = 6.7e-23
Identity = 59/116 (50.86%), Postives = 82/116 (70.69%), Query Frame = 1 

Query: 109 EVKLTIEDVKTMMEALHNNMETNNLELKA-----EIEGVFEEELSVGEVKEAFDLFDENG 168
           +VKL+ EDV T+ME L       + EL+       + G+FEEE S+ EVKEAFD+FD+NG
Sbjct: 98  DVKLSREDVTTVMETLGIFCSPESEELQDWFSSNNLPGLFEEEPSLKEVKEAFDVFDKNG 157

Query: 169 DGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSFC 220
           DGFIDAE+L++VL  +G    S+++ C+RMI  +D+N DGR+DF E+ KL+E SFC
Sbjct: 158 DGFIDAEELQRVLSLLGLKQGSDIENCKRMIRSFDENRDGRIDFNEYVKLMEASFC 213

[Close]
BLAST of CmoCh13G011930 vs. NCBI nr
Match: gi|1009124975|ref|XP_015879361.1| (PREDICTED: probable calcium-binding protein CML30 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-22
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 1 

Query: 109 EVKLTIEDVKTMMEALHNNMETNNLELKA-----EIEGVFEEELSVGEVKEAFDLFDENG 168
           +VKL+ EDV  +ME L       + EL+       + G+FEEE S+ EVKEAFD+FD+NG
Sbjct: 98  DVKLSREDVTMVMETLGIFCSPESKELQDWFSSNNLPGLFEEEPSLKEVKEAFDVFDKNG 157

Query: 169 DGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAKLVEQSFC 220
           DGFIDAE+L++VL  +G    S+++ C+RMI  +D+N DGR+DF E+ KL+E SFC
Sbjct: 158 DGFIDAEELQRVLSLLGLKQGSDIENCKRMIRSFDENRDGRIDFNEYVKLMEASFC 213

[Close]
BLAST of CmoCh13G011930 vs. NCBI nr
Match: gi|470130510|ref|XP_004301146.1| (PREDICTED: probable calcium-binding protein CML47 [Fragaria vesca subsp. vesca])

HSP 1 Score: 113.2 bits (282), Expect = 5.6e-22
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1 

Query: 95  CYTGIVGMPVN--DAHEVKLTIEDVKTMMEALHNNMETNNLELKAEIEGVFEEELSVGEV 154
           C    VG+  N  D  + KL + ++  +ME L +  + N  +   E+  + EEE S+ EV
Sbjct: 74  CIYKTVGVEQNTKDLGDTKLCLGELAAVMENLGSLCDDNGAK---EMADLLEEEPSLEEV 133

Query: 155 KEAFDLFDENGDGFIDAEDLKKVLDAMGFTVASEVDECRRMISGYDKNGDGRLDFEEFAK 214
           K+AF LFDEN DGFIDA ++KKVL  +GF  ASE  EC+RMI  +D+NGDGR+DFEEF K
Sbjct: 134 KDAFHLFDENADGFIDAGEIKKVLHVLGFIQASE-SECKRMIKSFDQNGDGRIDFEEFVK 193

Query: 215 LVEQSFC 220
           L+E SFC
Sbjct: 194 LMEDSFC 196

The following BLAST results are available for this feature:
BLAST of CmoCh13G011930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML45_ARATH1.9e-1741.86Probable calcium-binding protein CML45 OS=Arabidopsis thaliana GN=CML45 PE=1 SV=... [more]
CML30_ARATH4.2e-1741.53Probable calcium-binding protein CML30 OS=Arabidopsis thaliana GN=CML30 PE=2 SV=... [more]
CML47_ARATH5.1e-1531.73Probable calcium-binding protein CML47 OS=Arabidopsis thaliana GN=CML47 PE=2 SV=... [more]
CML28_ORYSJ1.8e-1249.21Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 ... [more]
CML22_ORYSJ3.1e-1246.48Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 ... [more]
BLAST of CmoCh13G011930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTE2_CUCSA4.2e-6465.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033260 PE=4 SV=1[more]
M5WTA8_PRUPE1.1e-1950.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024931mg PE=4 SV=1[more]
A0A161WUC2_DAUCA1.2e-1847.79Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011089 PE=4 SV=1[more]
W9QJD1_9ROSA5.9e-1847.90Putative calcium-binding protein CML45 OS=Morus notabilis GN=L484_008596 PE=4 SV... [more]
A0A078FNC8_BRANA7.7e-1838.89BnaA04g11660D protein OS=Brassica napus GN=BnaA04g11660D PE=4 SV=1[more]
BLAST of CmoCh13G011930 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G39670.11.1e-1841.86 Calcium-binding EF-hand family protein[more]
AT3G29000.12.4e-1841.53 Calcium-binding EF-hand family protein[more]
AT3G47480.12.9e-1631.73 Calcium-binding EF-hand family protein[more]
AT4G03290.12.3e-1342.47 EF hand calcium-binding protein family[more]
AT1G05990.13.9e-1341.67 EF hand calcium-binding protein family[more]
BLAST of CmoCh13G011930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068733|ref|XP_008445901.1|5.2e-7670.28PREDICTED: probable calcium-binding protein CML30 [Cucumis melo][more]
gi|449439625|ref|XP_004137586.1|6.0e-6465.12PREDICTED: probable calcium-binding protein CML47 [Cucumis sativus][more]
gi|1009124977|ref|XP_015879362.1|6.7e-2350.86PREDICTED: probable calcium-binding protein CML30 isoform X2 [Ziziphus jujuba][more]
gi|1009124975|ref|XP_015879361.1|2.5e-2250.00PREDICTED: probable calcium-binding protein CML30 isoform X1 [Ziziphus jujuba][more]
gi|470130510|ref|XP_004301146.1|5.6e-2249.61PREDICTED: probable calcium-binding protein CML47 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G011930.1CmoCh13G011930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 152..214
score: 1.0
IPR002048EF-hand domainSMARTSM00054efh_1coord: 151..179
score: 3.7E-6coord: 189..217
score: 3.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 147..182
score: 15.267coord: 185..219
score: 1
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 151..214
score: 1.6
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 111..214
score: 4.47
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 160..172
score: -coord: 198..210
scor
NoneNo IPR availableunknownCoilCoilcoord: 125..145
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 115..219
score: 1.4
NoneNo IPR availablePANTHERPTHR10891:SF574CALCIUM-BINDING PROTEIN CML30-RELATEDcoord: 115..219
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh13G011930Cucsa.112820Cucumber (Gy14) v1cgycmoB0260
CmoCh13G011930CmaCh13G011390Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G011930Cla018603Watermelon (97103) v1cmowmB196
CmoCh13G011930Csa1G033260Cucumber (Chinese Long) v2cmocuB191
CmoCh13G011930MELO3C001988Melon (DHL92) v3.5.1cmomeB184
CmoCh13G011930ClCG04G012200Watermelon (Charleston Gray)cmowcgB193
CmoCh13G011930CSPI01G05680Wild cucumber (PI 183967)cmocpiB195
CmoCh13G011930Lsi02G000780Bottle gourd (USVL1VR-Ls)cmolsiB193
CmoCh13G011930Cp4.1LG20g00290Cucurbita pepo (Zucchini)cmocpeB201
CmoCh13G011930MELO3C001988.2Melon (DHL92) v3.6.1cmomedB207
CmoCh13G011930CsaV3_1G005550Cucumber (Chinese Long) v3cmocucB0224
CmoCh13G011930Cla97C04G079110Watermelon (97103) v2cmowmbB219
CmoCh13G011930Bhi08G000971Wax gourdcmowgoB0263
CmoCh13G011930CsGy1G005400Cucumber (Gy14) v2cgybcmoB060
CmoCh13G011930Carg04702Silver-seed gourdcarcmoB0526
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G011930Cucumber (Gy14) v2cgybcmoB565
CmoCh13G011930Melon (DHL92) v3.6.1cmomedB196
CmoCh13G011930Silver-seed gourdcarcmoB0067
CmoCh13G011930Silver-seed gourdcarcmoB0138
CmoCh13G011930Silver-seed gourdcarcmoB0840
CmoCh13G011930Cucumber (Chinese Long) v3cmocucB0231
CmoCh13G011930Cucumber (Chinese Long) v3cmocucB0249
CmoCh13G011930Watermelon (97103) v2cmowmbB221
CmoCh13G011930Watermelon (97103) v2cmowmbB225
CmoCh13G011930Wax gourdcmowgoB0274
CmoCh13G011930Cucurbita moschata (Rifu)cmocmoB053
CmoCh13G011930Cucurbita moschata (Rifu)cmocmoB088
CmoCh13G011930Cucurbita moschata (Rifu)cmocmoB172
CmoCh13G011930Cucumber (Gy14) v1cgycmoB0583
CmoCh13G011930Cucumber (Gy14) v1cgycmoB0787
CmoCh13G011930Cucurbita maxima (Rimu)cmacmoB083
CmoCh13G011930Cucurbita maxima (Rimu)cmacmoB127
CmoCh13G011930Cucurbita maxima (Rimu)cmacmoB457
CmoCh13G011930Wild cucumber (PI 183967)cmocpiB215
CmoCh13G011930Cucumber (Chinese Long) v2cmocuB200
CmoCh13G011930Cucumber (Chinese Long) v2cmocuB213
CmoCh13G011930Melon (DHL92) v3.5.1cmomeB194
CmoCh13G011930Melon (DHL92) v3.5.1cmomeB176
CmoCh13G011930Watermelon (Charleston Gray)cmowcgB194
CmoCh13G011930Watermelon (Charleston Gray)cmowcgB198
CmoCh13G011930Watermelon (97103) v1cmowmB181
CmoCh13G011930Watermelon (97103) v1cmowmB205
CmoCh13G011930Cucurbita pepo (Zucchini)cmocpeB210
CmoCh13G011930Bottle gourd (USVL1VR-Ls)cmolsiB204
CmoCh13G011930Bottle gourd (USVL1VR-Ls)cmolsiB209