CmoCh13G011780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGAACGTACTGGACCCGAGATTCTGTAATCGGAGCAGATTTAAGCTCCCAAAACCCTAATGTGTACTCTCTCTTATTGACAATAATCTCAGTCCCCAGCGAAGAGAGCAACCGGACCAGTCCCAGGGTTTTAGACGGTGGGTTTTACCGGTTTTTGCCGAACAAGATGGTTGCTGATAAGGGCAAGAAGGCTAAGCTCTCCGAAAAGGGCGAAGACGACAATTCGGAGGTCATCGATGAGAAACTCGTAATATCCATCGAGAAGTTGCAGGAAATTCAAGACGAGCTCGAGAAGGTACTGATTCGATTCCTTTATGCTCTCTATATCGTTCCATCTGGTATTTTCTTTTGGCGGCCCCTGTGTTTAATGTTTACGAGGAGGAGAATGAAGCGAAGCGAGAAGCCTAGCTTGTGAACTATCTTGTTTTTTTGTGCTCAGTTGAGTTTGTGCCTTGTATCTAACTCAATTGGTCGGGGCACGTCTTCTAATTATACTTCAATTTGATACCCAAAGCTTGAGTCTTTTTTATAGGTTCGCTGAAGAACGTCAATGCCGACGTTCAATTCCTTTTGCCTGCTCTTGGGAAATCTGATTGTTCGTTCTTATACATCTTATGGTTGAGTGGTTTTGTTCATTGTGCGTGTTATGACTTAAAATCCATTTCTGCAGGTTCCCTAACAATTAAACAAAATGAATTGCGATAAATGTTCATCTTGAATTACACCTGCAACCCTAAAGTCGTGGTTGTAACCTATGGTTGTGTTTTCCTGTTTTTCCTGTCCCTGTACATGCCTTTTAACTTCTAATACTGCAGAATGCTGGTATCTTATTGATAGGGTACATATACTTAATTATATAGTCACAGTGTCACAGCTAGATTAACATTGATGTATATTTTACAATTAATTAAAATTTTCCATCAAGTTTGAAATAACTACTATTTTATAATCATTGCTGTTCATTTGGTTTGATCTTCAAGATCAATGAGGAGGCCAGTGACAAAGTCTTGGAAGTGGAGCAGAAGTATAATGAAGTACGAAAACCTGTCTACGATAAGCGGAATGAGATCATCAAATCAATTCCTGACTTCTGGTTAACAGCTGTTAGTATTATCCTCTCAAACATGACTTCTTTGAACTGATTATGACCTTGTTGTCATGCTGAAGAGTTTCATAACTGTTGCATTCTCTTTGTTTCCTGTAGAAAAAAATAACTGTTTCTTCCTCATCTTGCAGTTCTTAAGTCATCCTGCTCTTTGTGAACTTTTGACTGAAGAGGACCAGAAGGTTTGGCTTGACTCTTTTTTTTAGTTAATTTGTTTTGAGTTTTCAAAGTTGTAAATGGAAATGCAAGTAAAATGCTTAATTTTAATAGTGAAACTGATTTTGAGCCCCATAATTTTGTTATGGTACCTCGTGTCTAAATGTTCTTTGAAATGTTGTTTGTTGCTTTGTCTTTGTTAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTCAAAGATGTCAAATCGGGTTACTCAATTACTTTTGTGAGTTTGATCATTCCTTTAGCTTGCCCCTTTCATGTTCTGTTCCTATATTTTGCTTTTATTTTTTCTTATAGTGATTTCTTGCACTTGGTTCCTTATATTCTATTACAAATTTTCAATCAATGAACATCTTTACGAGTATTTCTTTTGTTTCTTTGATTCTACAGAACTTCAACACGAACCCTTATTTTGAAGAGACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACAAGGAAAGTTAATGCTACATCGATAAAATGGAAAGAGGGAATGGTGAGGGTTTTTTTCCCGGATAAGTACTTGTATTAGTTAGTCCAATTATTTTCACTAACTGTTTGCTGTACTCTACATATCTGAAGGGCATACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGGCCTCAGGTTGAGGAAAGGTTGGTTGTTAGAACCTGTTTATCAATAATCACCATTTTTTTAAAGAAAAAAGTTGTGGTGATTTGTGAAAGCACCGTCACTGTCCTATCTATTTTATGCTAGTTTGTTTGTCATACGAAGTCATATTTTAATTTATGAGGAAACAGCTATCATTCAGTTTACCTGACTTTAGATTCAATGGTCATCAAGGGATTCAAGGATGAGTTGATAATAAAAAGGCAAATGGCCAGAGAGTTTTAAGCTCTGAAAAATGAGGCTGTTTATCAAGTGTATACCACAAGTCTTTTTCTAGTACCTCAATACTAAGGTTTCAATTCAAGTAAAGACATAGATCGGAAGTTTATTTCACATTTTTAATTCTGCAAGATCGTGACAATTAGAAACATCTCATGATTGGGAAAAGGAAGCCTTTTTGTTGGATGATTCATCAGTCTGATTGGTTGATTGGCTTTAGTTTACTTTCTTATTTTCTGAGCACTGAAATTTGGCTGTACTACTCTTCATTGGGTTTGTAGATCTGGAGAAATTGGGCTGGAATTTACTTTTCTGTGGAAAAGGATTTTTTAATCTTTTGAAGTAATTTGTATTGAAAAGCTTCAACAGGGAAGGAAAATGTCAGAAAGTTTTTGTTGCTCAATTCTCTGATATCGTATACTCAGCTATATTATTATTATGGAAGAATGCATTTCCAAGTGACATACCTCCTGTGCATGAAATGAAGAAAATGCCTGGAACCTTTTTTTTTTTTTTTTTTTTAACATGACCTCACTAGTAGTACACTTTTTCCTGTTTTGGGTGCAGCTTTTTTAGCTGGTTTAGCAATACAGAACAGAAAGATATTGATGACTTTCATGATGAGGTAAGATGAAAATATTGTGCATATTGAGATCACCCCCACAAAAAGTTCTTTTTTTGAATATGGCGTTTGCATCTCTCAGAGGCAGGCGCTGACCAAAACACACATACATACACAATTTTTCCCAATTCCAAAAAGAGGAATACTATAATCTTTGTGATGACTGCCCTTTCACTTTAAAATAAATGCTATGTTCTGAAATCCTCTTTGGGTTGCAGGTTGCAGAAATTATCAAGGAGGACTTATGGCCTAACCCTTTATCCTACTTCAATAATGTGTGATTCTATCTGCTTCATTGGTTTTCCTCTTCTCAGCACACATGGCTATTTTCTCTGACGGTTATTGTACTGTGATACAGGAGGCTGATGAAGATGAATTAGAGGAAGAAGAATCTAATGAAGAGGTGAAGAAAAATAGTTTTACGGGCCTTTTTTAAACTCCTGATTAAGGCAGCTAATTCGTTATACTTGGCTGTTGTCTCATAGTTCACTAAATGGCTGTTCTGTAATCTTTTGCGTGTAGATTATAATTTATGTTTTGCTATTGCTTCTTTGCAGGGAAAGGAAGACGATGACTCTGAAGAGGATGACGACGACCAAGACGATGAGAATGATGCAGGTGATGACGAAGATGATGACTAG GTGAACGTACTGGACCCGAGATTCTGTAATCGGAGCAGATTTAAGCTCCCAAAACCCTAATGTGTACTCTCTCTTATTGACAATAATCTCAGTCCCCAGCGAAGAGAGCAACCGGACCAGTCCCAGGGTTTTAGACGGTGGGTTTTACCGGTTTTTGCCGAACAAGATGGTTGCTGATAAGGGCAAGAAGGCTAAGCTCTCCGAAAAGGGCGAAGACGACAATTCGGAGGTCATCGATGAGAAACTCGTAATATCCATCGAGAAGTTGCAGGAAATTCAAGACGAGCTCGAGAAGATCAATGAGGAGGCCAGTGACAAAGTCTTGGAAGTGGAGCAGAAGTATAATGAAGTACGAAAACCTGTCTACGATAAGCGGAATGAGATCATCAAATCAATTCCTGACTTCTGGTTAACAGCTTTCTTAAGTCATCCTGCTCTTTGTGAACTTTTGACTGAAGAGGACCAGAAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTCAAAGATGTCAAATCGGGTTACTCAATTACTTTTAACTTCAACACGAACCCTTATTTTGAAGAGACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACAAGGAAAGTTAATGCTACATCGATAAAATGGAAAGAGGGAATGGTGAGGGGCATACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGGCCTCAGGTTGAGGAAAGCTGGTTTAGCAATACAGAACAGAAAGATATTGATGACTTTCATGATGAGGAGGCTGATGAAGATGAATTAGAGGAAGAAGAATCTAATGAAGAGGGAAAGGAAGACGATGACTCTGAAGAGGATGACGACGACCAAGACGATGAGAATGATGCAGGTGATGACGAAGATGATGACTAG ATGGTTGCTGATAAGGGCAAGAAGGCTAAGCTCTCCGAAAAGGGCGAAGACGACAATTCGGAGGTCATCGATGAGAAACTCGTAATATCCATCGAGAAGTTGCAGGAAATTCAAGACGAGCTCGAGAAGATCAATGAGGAGGCCAGTGACAAAGTCTTGGAAGTGGAGCAGAAGTATAATGAAGTACGAAAACCTGTCTACGATAAGCGGAATGAGATCATCAAATCAATTCCTGACTTCTGGTTAACAGCTTTCTTAAGTCATCCTGCTCTTTGTGAACTTTTGACTGAAGAGGACCAGAAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTCAAAGATGTCAAATCGGGTTACTCAATTACTTTTAACTTCAACACGAACCCTTATTTTGAAGAGACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACAAGGAAAGTTAATGCTACATCGATAAAATGGAAAGAGGGAATGGTGAGGGGCATACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGGCCTCAGGTTGAGGAAAGCTGGTTTAGCAATACAGAACAGAAAGATATTGATGACTTTCATGATGAGGAGGCTGATGAAGATGAATTAGAGGAAGAAGAATCTAATGAAGAGGGAAAGGAAGACGATGACTCTGAAGAGGATGACGACGACCAAGACGATGAGAATGATGCAGGTGATGACGAAGATGATGACTAG
BLAST of CmoCh13G011780 vs. Swiss-Prot
Match: NRP1_ARATH (NAP1-related protein 1 OS=Arabidopsis thaliana GN=NRP1 PE=1 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.9e-71 Identity = 161/258 (62.40%), Postives = 203/258 (78.68%), Query Frame = 1
BLAST of CmoCh13G011780 vs. Swiss-Prot
Match: NRP2_ARATH (NAP1-related protein 2 OS=Arabidopsis thaliana GN=NRP2 PE=1 SV=2) HSP 1 Score: 249.6 bits (636), Expect = 3.5e-65 Identity = 162/257 (63.04%), Postives = 200/257 (77.82%), Query Frame = 1
BLAST of CmoCh13G011780 vs. Swiss-Prot
Match: NRP2_ORYSJ (NAP1-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0576700 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55 Identity = 145/249 (58.23%), Postives = 191/249 (76.71%), Query Frame = 1
BLAST of CmoCh13G011780 vs. Swiss-Prot
Match: NRP2_ORYSI (NAP1-related protein 2 OS=Oryza sativa subsp. indica GN=OsI_07785 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 5.6e-55 Identity = 145/249 (58.23%), Postives = 190/249 (76.31%), Query Frame = 1
BLAST of CmoCh13G011780 vs. Swiss-Prot
Match: NRP1_ORYSI (NAP1-related protein 1 OS=Oryza sativa subsp. indica GN=H0219H12.3 PE=3 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.9e-51 Identity = 130/257 (50.58%), Postives = 169/257 (65.76%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TrEMBL
Match: M5WBJ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010080mg PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 5.6e-86 Identity = 199/267 (74.53%), Postives = 226/267 (84.64%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TrEMBL
Match: A5AG47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038571 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 4.5e-83 Identity = 184/251 (73.31%), Postives = 217/251 (86.45%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TrEMBL
Match: A0A061FX30_THECC (NAP1-related protein 2 OS=Theobroma cacao GN=TCM_013948 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 9.3e-81 Identity = 189/276 (68.48%), Postives = 219/276 (79.35%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TrEMBL
Match: D7SIC8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g06030 PE=3 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79 Identity = 184/270 (68.15%), Postives = 217/270 (80.37%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TrEMBL
Match: A0A059A3Y0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02468 PE=3 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79 Identity = 175/256 (68.36%), Postives = 207/256 (80.86%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TAIR10
Match: AT1G74560.3 (AT1G74560.3 NAP1-related protein 1) HSP 1 Score: 279.6 bits (714), Expect = 1.8e-75 Identity = 150/211 (71.09%), Postives = 179/211 (84.83%), Query Frame = 1
BLAST of CmoCh13G011780 vs. TAIR10
Match: AT1G18800.1 (AT1G18800.1 NAP1-related protein 2) HSP 1 Score: 260.0 bits (663), Expect = 1.5e-69 Identity = 158/258 (61.24%), Postives = 197/258 (76.36%), Query Frame = 1
BLAST of CmoCh13G011780 vs. NCBI nr
Match: gi|659066366|ref|XP_008441189.1| (PREDICTED: NAP1-related protein 2 [Cucumis melo]) HSP 1 Score: 398.7 bits (1023), Expect = 7.5e-108 Identity = 230/266 (86.47%), Postives = 240/266 (90.23%), Query Frame = 1
BLAST of CmoCh13G011780 vs. NCBI nr
Match: gi|778656813|ref|XP_011649718.1| (PREDICTED: NAP1-related protein 2 [Cucumis sativus]) HSP 1 Score: 396.0 bits (1016), Expect = 4.9e-107 Identity = 228/266 (85.71%), Postives = 239/266 (89.85%), Query Frame = 1
BLAST of CmoCh13G011780 vs. NCBI nr
Match: gi|595848193|ref|XP_007209477.1| (hypothetical protein PRUPE_ppa010080mg [Prunus persica]) HSP 1 Score: 325.5 bits (833), Expect = 8.1e-86 Identity = 199/267 (74.53%), Postives = 226/267 (84.64%), Query Frame = 1
BLAST of CmoCh13G011780 vs. NCBI nr
Match: gi|694387089|ref|XP_009369309.1| (PREDICTED: NAP1-related protein 2 [Pyrus x bretschneideri]) HSP 1 Score: 321.6 bits (823), Expect = 1.2e-84 Identity = 196/267 (73.41%), Postives = 222/267 (83.15%), Query Frame = 1
BLAST of CmoCh13G011780 vs. NCBI nr
Match: gi|657965744|ref|XP_008374537.1| (PREDICTED: NAP1-related protein 2-like [Malus domestica]) HSP 1 Score: 320.5 bits (820), Expect = 2.6e-84 Identity = 196/267 (73.41%), Postives = 221/267 (82.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |