CmoCh13G011150 (gene) Cucurbita moschata (Rifu)

NameCmoCh13G011150
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProtein furry
LocationCmo_Chr13 : 9115489 .. 9115869 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTCCCCAAAGTCTATCTGACTGCCGCGATCGAGGAGGATATGAATGCCCGTGGAGGTGGTTATCAAAAGTAG

mRNA sequence

ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTCCCCAAAGTCTATCTGACTGCCGCGATCGAGGAGGATATGAATGCCCGTGGAGGTGGTTATCAAAAGTAG

Coding sequence (CDS)

ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTCCCCAAAGTCTATCTGACTGCCGCGATCGAGGAGGATATGAATGCCCGTGGAGGTGGTTATCAAAAGTAG
BLAST of CmoCh13G011150 vs. TrEMBL
Match: A0A0A0LVM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039260 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.6e-60
Identity = 113/126 (89.68%), Postives = 118/126 (93.65%), Query Frame = 1

Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

BLAST of CmoCh13G011150 vs. TrEMBL
Match: A0A067KGH4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11736 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-51
Identity = 99/123 (80.49%), Postives = 109/123 (88.62%), Query Frame = 1

Query: 4   ASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPETV 63
           A+SS  QTLKR+IKKPWEITGPCADPEY+ A+PS +EYRV CPAT K K IVPTS+PETV
Sbjct: 8   AASSLLQTLKRFIKKPWEITGPCADPEYRSAIPSPLEYRVHCPATPKIKPIVPTSDPETV 67

Query: 64  FDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNARGGG 123
           +DIKYYTRDQRRNRPPI+RTILKK DVEKMMKET FD A+FP VYLTA +EED NARGGG
Sbjct: 68  YDIKYYTRDQRRNRPPIKRTILKKADVEKMMKETTFDVANFPPVYLTATVEEDYNARGGG 127

Query: 124 YQK 127
           YQK
Sbjct: 128 YQK 130

BLAST of CmoCh13G011150 vs. TrEMBL
Match: A0A0D2MHQ3_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_003G101800 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-51
Identity = 102/125 (81.60%), Postives = 109/125 (87.20%), Query Frame = 1

Query: 2   AKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPE 61
           +KASSS FQ+L+RYIKKPWEITGPCADPEYK AVP A EYRV CPATT +K IVPTS+PE
Sbjct: 39  SKASSSLFQSLRRYIKKPWEITGPCADPEYKNAVPKATEYRVRCPATTLQKPIVPTSDPE 98

Query: 62  TVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNARG 121
           TVFDIKYY+RDQRRNRPPIRRTILKK DV KMMKE  FD  DFPKVYLTA +EED NA G
Sbjct: 99  TVFDIKYYSRDQRRNRPPIRRTILKKDDVVKMMKEKTFDVNDFPKVYLTAKVEEDENAVG 158

Query: 122 GGYQK 127
           GGYQK
Sbjct: 159 GGYQK 163

BLAST of CmoCh13G011150 vs. TrEMBL
Match: A0A0D2RER4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G101800 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-51
Identity = 102/125 (81.60%), Postives = 109/125 (87.20%), Query Frame = 1

Query: 2   AKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPE 61
           +KASSS FQ+L+RYIKKPWEITGPCADPEYK AVP A EYRV CPATT +K IVPTS+PE
Sbjct: 3   SKASSSLFQSLRRYIKKPWEITGPCADPEYKNAVPKATEYRVRCPATTLQKPIVPTSDPE 62

Query: 62  TVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNARG 121
           TVFDIKYY+RDQRRNRPPIRRTILKK DV KMMKE  FD  DFPKVYLTA +EED NA G
Sbjct: 63  TVFDIKYYSRDQRRNRPPIRRTILKKDDVVKMMKEKTFDVNDFPKVYLTAKVEEDENAVG 122

Query: 122 GGYQK 127
           GGYQK
Sbjct: 123 GGYQK 127

BLAST of CmoCh13G011150 vs. TrEMBL
Match: W9RRE2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019074 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-51
Identity = 97/123 (78.86%), Postives = 110/123 (89.43%), Query Frame = 1

Query: 4   ASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPETV 63
           A++S FQ+LKR+ KKPWEITGPCADPEY+ A+P A+EYR+ CPATTK K  VPTSNPETV
Sbjct: 8   ATTSLFQSLKRFFKKPWEITGPCADPEYRSALPGALEYRLSCPATTKLKPSVPTSNPETV 67

Query: 64  FDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNARGGG 123
           +DIKYYTRDQRRNRPPIRRT+LKK DVE+M KET FD ADFP+VYLTAA+EED NARGGG
Sbjct: 68  YDIKYYTRDQRRNRPPIRRTVLKKADVERMKKETTFDIADFPRVYLTAAVEEDYNARGGG 127

Query: 124 YQK 127
           YQK
Sbjct: 128 YQK 130

BLAST of CmoCh13G011150 vs. TAIR10
Match: AT5G08060.1 (AT5G08060.1 unknown protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-43
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 1

Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           ++ A+SS  Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  E+AIVP+S+P
Sbjct: 5   VSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDP 64

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-FDPADFPKVYLTAAIEEDMNA 120
           ETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K FD +DFPKVYLT  +EED++ 
Sbjct: 65  ETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDT 124

Query: 121 RGGGYQK 127
           RGGGY+K
Sbjct: 125 RGGGYEK 131

BLAST of CmoCh13G011150 vs. NCBI nr
Match: gi|659066583|ref|XP_008451315.1| (PREDICTED: uncharacterized protein LOC103492624 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 9.3e-62
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 1

Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

BLAST of CmoCh13G011150 vs. NCBI nr
Match: gi|449439331|ref|XP_004137439.1| (PREDICTED: uncharacterized protein LOC101204278 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 5.1e-60
Identity = 113/126 (89.68%), Postives = 118/126 (93.65%), Query Frame = 1

Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEEDMN  
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

BLAST of CmoCh13G011150 vs. NCBI nr
Match: gi|1009131922|ref|XP_015883106.1| (PREDICTED: uncharacterized protein LOC107418925 [Ziziphus jujuba])

HSP 1 Score: 212.6 bits (540), Expect = 3.9e-52
Identity = 98/126 (77.78%), Postives = 113/126 (89.68%), Query Frame = 1

Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           ++ ASSS FQTLKRYIKKPWEITGPCADPEYK A+P A+EYR+ CPA+ K +A VP+SNP
Sbjct: 5   VSSASSSLFQTLKRYIKKPWEITGPCADPEYKSALPGALEYRLTCPASAKVEACVPSSNP 64

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETV+DIKY+TRDQRRNRPPIRRTIL+KPDVEK+MKE  FD +DFP+VYLT  IEED+NAR
Sbjct: 65  ETVYDIKYFTRDQRRNRPPIRRTILRKPDVEKLMKEKTFDVSDFPRVYLTQTIEEDINAR 124

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 125 GGGYQK 130

BLAST of CmoCh13G011150 vs. NCBI nr
Match: gi|719966862|ref|XP_010260157.1| (PREDICTED: uncharacterized protein LOC104599343 [Nelumbo nucifera])

HSP 1 Score: 211.5 bits (537), Expect = 8.8e-52
Identity = 99/124 (79.84%), Postives = 109/124 (87.90%), Query Frame = 1

Query: 2   AKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPE 61
           + A+ S FQ+LKR+IKKPWEITGPCADPEYK A+PSA+EYRVFCPAT   KA VPTSNPE
Sbjct: 7   SSAAKSLFQSLKRFIKKPWEITGPCADPEYKSALPSALEYRVFCPATAHAKACVPTSNPE 66

Query: 62  TVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNARG 121
           TV+DIKYYTRDQRRNRPPIRRTIL+K DVEKMMKE  FD +DFP VYLTA +EED NARG
Sbjct: 67  TVYDIKYYTRDQRRNRPPIRRTILRKADVEKMMKEKTFDASDFPPVYLTAKVEEDDNARG 126

Query: 122 GGYQ 126
           GGYQ
Sbjct: 127 GGYQ 130

BLAST of CmoCh13G011150 vs. NCBI nr
Match: gi|720006595|ref|XP_010258033.1| (PREDICTED: uncharacterized protein LOC104597932 [Nelumbo nucifera])

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-51
Identity = 103/131 (78.63%), Postives = 111/131 (84.73%), Query Frame = 1

Query: 1   MAKASSS-----FFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIV 60
           MA +SSS      FQ+LKR+IKKPWEITGPCADPEYK A+PSA+EYRVFCPAT   KA V
Sbjct: 1   MAASSSSSGVKSMFQSLKRFIKKPWEITGPCADPEYKSALPSALEYRVFCPATAHAKACV 60

Query: 61  PTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEE 120
           PTSNPETV+DIKYYTRDQRRNRPPIRRTILKK DVEKMMKE  FD +DFP VYLTA +EE
Sbjct: 61  PTSNPETVYDIKYYTRDQRRNRPPIRRTILKKADVEKMMKEKTFDVSDFPPVYLTAKVEE 120

Query: 121 DMNARGGGYQK 127
           D N RGGGYQK
Sbjct: 121 DDNTRGGGYQK 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LVM5_CUCSA3.6e-6089.68Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039260 PE=4 SV=1[more]
A0A067KGH4_JATCU1.4e-5180.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11736 PE=4 SV=1[more]
A0A0D2MHQ3_GOSRA1.8e-5181.60Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_003G101800 PE=... [more]
A0A0D2RER4_GOSRA1.8e-5181.60Uncharacterized protein OS=Gossypium raimondii GN=B456_003G101800 PE=4 SV=1[more]
W9RRE2_9ROSA1.8e-5178.86Uncharacterized protein OS=Morus notabilis GN=L484_019074 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G08060.12.1e-4364.57 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659066583|ref|XP_008451315.1|9.3e-6292.06PREDICTED: uncharacterized protein LOC103492624 [Cucumis melo][more]
gi|449439331|ref|XP_004137439.1|5.1e-6089.68PREDICTED: uncharacterized protein LOC101204278 [Cucumis sativus][more]
gi|1009131922|ref|XP_015883106.1|3.9e-5277.78PREDICTED: uncharacterized protein LOC107418925 [Ziziphus jujuba][more]
gi|719966862|ref|XP_010260157.1|8.8e-5279.84PREDICTED: uncharacterized protein LOC104599343 [Nelumbo nucifera][more]
gi|720006595|ref|XP_010258033.1|1.5e-5178.63PREDICTED: uncharacterized protein LOC104597932 [Nelumbo nucifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G011150.1CmoCh13G011150.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36391FAMILY NOT NAMEDcoord: 1..126
score: 5.1
NoneNo IPR availablePANTHERPTHR36391:SF1SUBFAMILY NOT NAMEDcoord: 1..126
score: 5.1

The following gene(s) are paralogous to this gene:

None