CmoCh13G011110 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G011110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RHOMBOID-like protein 12
Location	Cmo_Chr13 : 9093955 .. 9098358 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATGAAAAATTGAGGGATATTTATAAAAGGGTCTATCTAAATTTTGTTTTTGGTAAAATATTTAAGTACGATTGCTAGCTTAGAGAATAGAGATCGCGGGTAGCCCAGCACTCCCAAGTATAAACCTGTTTTCCAAACTCCCAGCCAGAGCTCTCTGAAGACCATAATCAAGGAAAACATGAACAAAATCTTTTCTCGCAAACTTGCATCAAGGCTTTCGAATTCCTATGGGAATTCTCACTATTGCAGGGATTGCGCTTCTTTTGCCACACAAGTGCGAACCGGTAACCAAAACTACTTCTATGGCTCCTTCATCACTCGCCCGGTTAAGGATCACTCGCGTTCATGGAGTTCACATCGAAGTTTTACCGAGAAAATTCATGGGTTTTTCTCAGGCCCGGTGGTCGGAAAGCGATTCATATTGAATCCTTCAAACACCCTTTTCAAGGGGTCCATTAAGAGTCTAGTAGGAAGGTCTCTCTTTATGGGAAGCCCATTTTCGAAACTGAAATTTCAGTTGAAACCAGGTTTTGATCATCGATGGTCAGGCAGGTAATGCGTCTGCTCTGTTAGTAACTTCTTTTAATCGCTGAAGAATGTGAAGTCCTTTCATATACAAATGAATTCGTCGCTGAAGAATGTGAAGTCCTTGTTCTTCATTCAGAGCTGAATATCCTAGTTTCCATAATTTCATTTTCGACGGTGAATTCGAATTTTCCCAATTGCATTGTCCTGTTAAAGTTTGCAAACCATTATGCACTACAATATATTAAATGATTGCATGAGCAATTGGGAAATCTGATTAGTTCAAGAACAATTGTTATGCTGATTACTACTTGTTGGCACGAGGAAGGTGGGGAACTTCCAACTTCGTCAAATAAGTTCAAGCACTCCAATTTTTAGATGCCCCCCGTAGCATAGAGACTCTAACCTAGATTAGTGCTTGCTGTTTTGAAACTTCCTTCTTTGTTATTTTAGAATTAGCATTGTTCTTATCATGGGTTACTTAAGTTATTGTATAACATATCAAAATAACTTATTAGCCTTCTACATTTGAATAGGCTTGGTGGGTCTTTTAGTATTGAATACAATAAAACAGGTTATAATCATTTGAACAAAGGGGAGGATACTTCCTGATGAACATTGTTGATTATTTGGGGAAGTCCTTATTTTTGTTTTCTTATTCACAGGAGGGCATGGTTTCAAAGGCTGACGACTAATGATGTAGTGTTGGGGTTGATTATAGCTAATGTTGCTGTTTTCCTCCTCTGGCGGATTGCTGATCCTATCTTTATGTCAAAAAACTTTACTGTGAGTCCTTGATTGCAATTACATGCCTCAGAATTGTAGGCACCAATAGAATTATTTCTTCTCACCGATTTTGGTTAGGATCCATTTCTCTTGAATTGAGAGACTATTGATGTTCCATGGGAGCTCTTATGGGGCCATTCTTGAGGGAATCAACTATGTCCAGAAATCTAGATTATGAGTAATTGCATGTCTAGGAATCAAGATTAATCGTGTTTGTTTGGCATGATATATTCGTGAAAATTTTGTAATTATGGCTGAAAATATTATTACCTATGTTGCCAATCCAAGGGCACCAATTACCATCCAAAAAGTGGATGGTTCAATCTCCCACCCTGCAATTATCGAACAGGAAAAAAATTAGATAACTATGTCTGTTTTGCTAGAATTGTCTATATAAGCGTAATAAAATATCAATTTGTTCTACTGATGCCTCTATAATTTGAAACTAGAGGATTTGGATTAATGATAGGATATCCATCTTTAAAACCCATTTCATCTCACTCATATCCAAATCACCCCTCCATCGGCATCTCAAACACCAAAGATACTTAGTAAACCACATTCCTCGGAAGAGAAACATGGGATTCGACATATCCACCACATGGACGTTTAGAACTTCTCAAGATGAATGGCCCCTGAAAGTTGTTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTTCTTAGCAGATGCGTTTTAAAACCTTGAGGGGAAGCTTGGAAGGAAACGCCCAAAGAGGATAATATTTCTAGCGGTGAGCTTAGGCTGTTACAAATGGTATTAGAGCTAGACACCGAGCGGTGTGCTAGCAAGGACGCTGAGCCCAGAAGGGGGTGGATTATGAGATCCCACATCAATTGGAGAGAGGAACGAGTGTTAGCGAAGACGCTGGGTCTTGAAGGGAGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTGTTTATGAGGGTGTGGAAACTTCTCCCTAACATATATATATATATTGTTTTTATTTATTTAATTATATATATATATATTGTCAAATTGATTAACATGGTTTGAGAAATATTTGTGGCAATGTTACAACATTAGATGCCGTTTTGGAAGTTTTTTAATTTTAAAGCTTGGAACTTCAATTCAACTGTTCTCTGTTGGCAACATTATATTTTCAATATTTCAATTTTCTGTACACAGATCTCTGTAGAAAATGTTAGAAGCGGACGCATACATACATTGATTACATCAGCCTTCAGTCACGTAGAAATTGGCCATATAGTATCCAACATGATTGGACTATACTTCTTTGGGATGAACGTATGGCTATCTTTCTTCGAACTTCTACTAGGTCCTGATTTTATTTGTTTTATTTTCTCTGTTTATATGGGGGTGGCTTGTATAACTTTTTATTTTGTTATGATCTTTACCGCTTTCCTCGTTTTGGCTTAGAATTATGCCTTGTGAATAAAAAGAATTTTGAAGATACATAAATATTGATGAATGAACGTTATTGTGCCTTGTATGCTAATGTTAGAGTTGATATTGGATTTGGAGTAATATATTTCGATTCAAGTTGTTGTCGGGTGAGCTTCGTATGACTTTTGGATATAATGTGTTCAACTTCAGTAGAAGTATTTTTCAAAATTTCCACATAGTGTGGTTAAATAGACAAAAGTAATTTAAAAAGTTCTAAAAGTGCTCACCTAAGAATTGCGCATCCCATACTGTTAGTCTACTTATGAACTATAACCCAGTTCTGTTTGTCTCAAGAGTTTGTATGCTGCTTCTAAAGTTGGCTTTAATGTTTTGAATTCGTCTTTCCCGTTAGTGTTAAAACTGACCTTTGTCATCCTTGTTAGCATTGATAGACCTTATATATTTTGCCTTTAACAGATCGGTCGAGTGTTTGGTCCTGAGTTTTTGTTGGGATTGTATCTGGCTGGAGCAATTGGTGGGTCAGCATTTTACTTGGCACATCATCTGTTTCAAGCATCATCCTCAGAGGTATGCAAATTTTGTCCCAAAAATTGTGTATGGGCTCAGTTCTTTCATTTCAAATTTCTAGGACGCTTATAACATTGTTGGCTGGTTTTCTGCTTTCTACAGAGCCGGCCATTTTGGGGCAAGGATCCCGCACGAGCACAAGGATTGGTATGCTCTTGGAAATCCTTCTGGTTCTTTACTATTACTTTTTCAACTATAGAAGCCCTTCTTATTCTCTGTGTTTAACCTTACATTGTACTGATCACATTCAACGTCCGAACGTCAAGATACTTATTAGAACTTGAATATGATTGGTAGTCGTTTTGAATGATCACTTAGGGTGCAAGCGGAGCTGTAAATGCTATCATGCTGCTTGATATATTCCTCTTCCCAAAGTCGACCCTCTATCTCGAATTCTTTATACCTGTTCCTGCCATCTTACTGGTAAGCTGAACTCTAACTAGCACAAAGATTCACAGTCCACTATGAAAAATCCTGAAAGAGTTCTTGTGGTTTCATTACAGGGCATTTTTCTCATTGGAAAAGACATGTTGAGGATACTAGAGGTATGATGCTTAATTGAGAATACCTAAACTTCTCCATCCGCCTCCACCCTCCGTTCTTTTCTCTGTTGCATATGGCTGAACTCCTACTGTTAAAATCTGTATGGTCTCTGCAGAATGACAGCCAAATTTCAGGATCTGCACACCTCGGGGGTGCTGCAGTTGCAGCCTTAGCCTGGGCCCGAGTTCGCCGGGGTCGTTTCTGAATATCAAAAGAACTTTCGTACTCGCAATCCAGATTTGATGCAGCAATGCACATCATCATCTTCTTTCCCATTTCTCTCATTCTACACTATCTTCTTTTTAGTGTATAGAAGCTGAAAGAGTTTTCAGGGCTTAATTGGTTTAATACATTTATATTTCATTACATAGTTTGTTCAGTAAACTTCTGATTGTTTATATATGTCACGCTGCCTACCTAATGGCAATCCATTAAACTTCTGATAGACCCTGTTTGGAAACATTGAGAAGCTCATTCACGACTAGAATTAAATTTTGGCCTGGATAAGCCGAGGGTGGAGACCCA

mRNA sequence

AAGATGAAAAATTGAGGGATATTTATAAAAGGGTCTATCTAAATTTTGTTTTTGGTAAAATATTTAAGTACGATTGCTAGCTTAGAGAATAGAGATCGCGGGTAGCCCAGCACTCCCAAGTATAAACCTGTTTTCCAAACTCCCAGCCAGAGCTCTCTGAAGACCATAATCAAGGAAAACATGAACAAAATCTTTTCTCGCAAACTTGCATCAAGGCTTTCGAATTCCTATGGGAATTCTCACTATTGCAGGGATTGCGCTTCTTTTGCCACACAAGTGCGAACCGGTAACCAAAACTACTTCTATGGCTCCTTCATCACTCGCCCGGTTAAGGATCACTCGCGTTCATGGAGTTCACATCGAAGTTTTACCGAGAAAATTCATGGGTTTTTCTCAGGCCCGGTGGTCGGAAAGCGATTCATATTGAATCCTTCAAACACCCTTTTCAAGGGGTCCATTAAGAGTCTAGTAGGAAGGTCTCTCTTTATGGGAAGCCCATTTTCGAAACTGAAATTTCAGTTGAAACCAGGTTTTGATCATCGATGGTCAGGCAGGAGGGCATGGTTTCAAAGGCTGACGACTAATGATGTAGTGTTGGGGTTGATTATAGCTAATGTTGCTGTTTTCCTCCTCTGGCGGATTGCTGATCCTATCTTTATGTCAAAAAACTTTACTATCTCTGTAGAAAATGTTAGAAGCGGACGCATACATACATTGATTACATCAGCCTTCAGTCACGTAGAAATTGGCCATATAGTATCCAACATGATTGGACTATACTTCTTTGGGATGAACATCGGTCGAGTGTTTGGTCCTGAGTTTTTGTTGGGATTGTATCTGGCTGGAGCAATTGGTGGGTCAGCATTTTACTTGGCACATCATCTGTTTCAAGCATCATCCTCAGAGAGCCGGCCATTTTGGGGCAAGGATCCCGCACGAGCACAAGGATTGGGTGCAAGCGGAGCTGTAAATGCTATCATGCTGCTTGATATATTCCTCTTCCCAAAGTCGACCCTCTATCTCGAATTCTTTATACCTGTTCCTGCCATCTTACTGGGCATTTTTCTCATTGGAAAAGACATGTTGAGGATACTAGAGAATGACAGCCAAATTTCAGGATCTGCACACCTCGGGGGTGCTGCAGTTGCAGCCTTAGCCTGGGCCCGAGTTCGCCGGGGTCGTTTCTGAATATCAAAAGAACTTTCGTACTCGCAATCCAGATTTGATGCAGCAATGCACATCATCATCTTCTTTCCCATTTCTCTCATTCTACACTATCTTCTTTTTAGTGTATAGAAGCTGAAAGAGTTTTCAGGGCTTAATTGGTTTAATACATTTATATTTCATTACATAGTTTGTTCAGTAAACTTCTGATTGTTTATATATGTCACGCTGCCTACCTAATGGCAATCCATTAAACTTCTGATAGACCCTGTTTGGAAACATTGAGAAGCTCATTCACGACTAGAATTAAATTTTGGCCTGGATAAGCCGAGGGTGGAGACCCA

Coding sequence (CDS)

ATGAACAAAATCTTTTCTCGCAAACTTGCATCAAGGCTTTCGAATTCCTATGGGAATTCTCACTATTGCAGGGATTGCGCTTCTTTTGCCACACAAGTGCGAACCGGTAACCAAAACTACTTCTATGGCTCCTTCATCACTCGCCCGGTTAAGGATCACTCGCGTTCATGGAGTTCACATCGAAGTTTTACCGAGAAAATTCATGGGTTTTTCTCAGGCCCGGTGGTCGGAAAGCGATTCATATTGAATCCTTCAAACACCCTTTTCAAGGGGTCCATTAAGAGTCTAGTAGGAAGGTCTCTCTTTATGGGAAGCCCATTTTCGAAACTGAAATTTCAGTTGAAACCAGGTTTTGATCATCGATGGTCAGGCAGGAGGGCATGGTTTCAAAGGCTGACGACTAATGATGTAGTGTTGGGGTTGATTATAGCTAATGTTGCTGTTTTCCTCCTCTGGCGGATTGCTGATCCTATCTTTATGTCAAAAAACTTTACTATCTCTGTAGAAAATGTTAGAAGCGGACGCATACATACATTGATTACATCAGCCTTCAGTCACGTAGAAATTGGCCATATAGTATCCAACATGATTGGACTATACTTCTTTGGGATGAACATCGGTCGAGTGTTTGGTCCTGAGTTTTTGTTGGGATTGTATCTGGCTGGAGCAATTGGTGGGTCAGCATTTTACTTGGCACATCATCTGTTTCAAGCATCATCCTCAGAGAGCCGGCCATTTTGGGGCAAGGATCCCGCACGAGCACAAGGATTGGGTGCAAGCGGAGCTGTAAATGCTATCATGCTGCTTGATATATTCCTCTTCCCAAAGTCGACCCTCTATCTCGAATTCTTTATACCTGTTCCTGCCATCTTACTGGGCATTTTTCTCATTGGAAAAGACATGTTGAGGATACTAGAGAATGACAGCCAAATTTCAGGATCTGCACACCTCGGGGGTGCTGCAGTTGCAGCCTTAGCCTGGGCCCGAGTTCGCCGGGGTCGTTTCTGA

Homology

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BLAST of CmoCh13G011110 vs. Swiss-Prot
Match: RBL12_ARATH (RHOMBOID-like protein 12, mitochondrial OS=Arabidopsis thaliana GN=RBL12 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.6e-84
Identity = 185/338 (54.73%), Postives = 230/338 (68.05%), Query Frame = 1


Query: 6   SRKLASRLSNSYGNSHYCRDCASFA---TQVRTGNQNYFYGSFITRPVK--DHSRSWSSH 65
           S +L   L+N   +SH  R   +      Q R    +Y   S  + PV   D S+ W S 
Sbjct: 14  SSRLTKLLANPTTHSHLNRQTFTSLYKPNQSRHFRTHYLPSSPSSPPVSRFDPSQLWRS- 73

Query: 66  RSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSLFMGSPFSK--LKFQLKPGF 125
               EKI GFF+  +  K   L          ++S VG   F+GS F K   +FQ   GF
Sbjct: 74  ----EKIRGFFASALGNKAVKLG-------NLVESRVG---FIGSQFPKKGFEFQRFSGF 133

Query: 126 DHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHT 185
             R  G + W Q L+  DVVLGL+IAN  VF++WR+ +  FM  NF IS++N +SGR+HT
Sbjct: 134 QRR--GWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLHT 193

Query: 186 LITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQA 245
           LITSAFSH++IGHIVSNMIGLYFFG +I R FGP+FLL LYLAGA+GGS FYL HH + A
Sbjct: 194 LITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAYMA 253

Query: 246 SSS-ESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLI 305
           ++S + +  + +DP+R  GLGASGAVNAIMLLDIFL P++TLYLEFFIPVPA+LLGIFLI
Sbjct: 254 ATSPKGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLI 313

Query: 306 GKDMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           GKD+LRI E +S ISGSAHLGGAAVAA+AWAR+R+GRF
Sbjct: 314 GKDILRITEGNSNISGSAHLGGAAVAAIAWARIRKGRF 334

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BLAST of CmoCh13G011110 vs. Swiss-Prot
Match: RBL16_ARATH (Rhomboid-like protein 16, chloroplastic OS=Arabidopsis thaliana GN=RBL16 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-44
Identity = 114/282 (40.43%), Postives = 161/282 (57.09%), Query Frame = 1


Query: 62  SFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSLFMGSPFSKLKFQLK--PGFD 121
           S + ++HGFF+G +      L   N +          R+ F  S      F+     GF 
Sbjct: 52  SRSARVHGFFAGKLGNTNLKLKFGNVM--------ESRAGFFSSELPSHGFESGGFTGFQ 111

Query: 122 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIA--DPIFMSKNFTISVENVRSGRIH 181
            R  G ++W      N VV GL+IAN AVF +WR+   D ++M KNF +S  +  +GRIH
Sbjct: 112 KR--GWKSWING--ANGVVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIH 171

Query: 182 TLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQ 241
           TLITS FSHV   HI+ NM+GL +FG  I R FGP +LL LY AGA+GGS F+L+ H   
Sbjct: 172 TLITSGFSHVGATHIILNMMGLCYFGARIARSFGPRYLLKLYFAGALGGSVFFLSSHALS 231

Query: 242 ASSSESRPFWGKDPARAQ--GLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIF 301
             S + +    KD  +     LGA+G V AI LLD+ L+PK T Y    + VP +  GI+
Sbjct: 232 VISLKGQRVVPKDQLKVPIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP-VFAGIY 291

Query: 302 LIGKDMLRILE--NDSQISGSAHLGGAAVAALAWARVRRGRF 336
            +G +++++LE  N++ ++    LGG  VA +AWAR+R+GRF
Sbjct: 292 SLGLNIIKMLEGKNNNTLTSLDQLGGVVVAVIAWARIRKGRF 320

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BLAST of CmoCh13G011110 vs. Swiss-Prot
Match: RBL17_ARATH (Rhomboid-like protein 17, chloroplastic OS=Arabidopsis thaliana GN=RBL17 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-36
Identity = 105/281 (37.37%), Postives = 149/281 (53.02%), Query Frame = 1


Query: 62  SFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSLFMGSPFSKLKFQLK--PGFD 121
           S + K+HGFF+  +      L   N +          R+ F  S      F+     GF 
Sbjct: 58  SRSAKVHGFFASKLGNTNLKLKFGNVM--------ESRAGFFSSELPSHGFESGGFTGFQ 117

Query: 122 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL 181
            R  G ++W      N VV GL+IAN AVF +WR++D     +++ +S  +  SG IHTL
Sbjct: 118 KR--GWKSWING--ANGVVFGLVIANAAVFTMWRVSD-----RSWMLSTYSFTSGYIHTL 177

Query: 182 ITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQAS 241
           ITS FSH+    I+ NMIG+ +FG  I R  GP +LL LY AGA+GGS  +L++H   A+
Sbjct: 178 ITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLAT 237

Query: 242 SSESRPFWGKDPARA---QGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFL 301
                       + A   Q LGA G++ AI LLD+F++PK T Y    + V  ++  I  
Sbjct: 238 LKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRV-HVMFRIIN 297

Query: 302 IGKDMLRILENDSQ--ISGSAHLGGAAVAALAWARVRRGRF 336
           +G ++L I E       S S  LGG  VAA+AWAR+++GRF
Sbjct: 298 LGVEILNIPEGGPNHIASSSGQLGGVVVAAMAWARIKKGRF 320

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BLAST of CmoCh13G011110 vs. Swiss-Prot
Match: PCP1_YEAST (Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCP1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 64/234 (27.35%), Postives = 104/234 (44.44%), Query Frame = 1


Query: 95  SLVGRSLFMGSPF-SKLKFQLKPGFDHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWR 154
           +++G SL  G  F S   F+  P F          + +    ++V  L+  NVAVF LW+
Sbjct: 111 TILGLSLMAGIYFGSPYLFEHVPPFT---------YFKTHPKNLVYALLGINVAVFGLWQ 170

Query: 155 IADPIFMSKNFTISVENVRSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPE 214
           +       + + +  ++  + +I ++I SAFSH E  H+  NM+ L+ FG ++  + G  
Sbjct: 171 LPKCWRFLQKYMLLQKDYVTSKI-SIIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGAS 230

Query: 215 FLLGLYLAGAIGGSAFYLAHHLFQASSSESRPFWGKDPARAQGLGASGAVNAIMLLDIFL 274
               LY+  AI GS F L +           P   +       LGASGA+  ++    +L
Sbjct: 231 NFFSLYMNSAIAGSLFSLWY-----------PKLARLAIVGPSLGASGALFGVLGCFSYL 290

Query: 275 FPKSTLYLEFFIPVPAILLGIFL--IGKDMLRILENDSQISGSAHLGGAAVAAL 326
           FP + + L F  PVP      FL  +  +             +AHLGG+ +  L
Sbjct: 291 FPHAKILL-FVFPVPGGAWVAFLASVAWNAAGCALRWGSFDYAAHLGGSMMGVL 322

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BLAST of CmoCh13G011110 vs. Swiss-Prot
Match: YOHB_SCHPO (Uncharacterized protein C13E7.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13E7.11 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 58/200 (29.00%), Postives = 91/200 (45.50%), Query Frame = 1


Query: 133 TTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTI---SVENVRSGRIHTLITSAFSHVEI 192
           ++  +VL +I  NV VF LWR   P F   N  +   +V N     + ++I SAFSH   
Sbjct: 75  SSRSLVLSIIGINVGVFALWRA--PRFSHLNRFLQKYAVMNPIFINMPSMIVSAFSHQSG 134

Query: 193 GHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQASSSESRPFWGK 252
            H++ NM+  Y F   I  VFG    +  Y++  +  +   L HH  +  +         
Sbjct: 135 WHLLFNMVAFYSFAPAIVDVFGNNQFVAFYISSILFSNVASLLHHRLRFGTK-------- 194

Query: 253 DPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGK---DMLRILE 312
                  LGASGA+ AI     + FP +++ +  F+P   I +G+ L+G    D   ++ 
Sbjct: 195 --VTPGSLGASGAIYAIAAATSYFFPNASVSI-IFLPFIPIKIGVALLGLMAFDAWGLIS 254

Query: 313 -------NDSQISGSAHLGG 320
                  N + I  +AHLGG
Sbjct: 255 RGFSSFANFTLIDHAAHLGG 261

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BLAST of CmoCh13G011110 vs. TrEMBL
Match: A0A0A0LTI7_CUCSA (Rhomboid-like protein OS=Cucumis sativus GN=Csa_1G039320 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 3.3e-161
Identity = 287/336 (85.42%), Postives = 313/336 (93.15%), Query Frame = 1


Query: 1   MNKIFSRKLASRLSNSYGNSHYCRDCASFATQVRTGNQNYFYGSFITRPVKDHSRSWSSH 60
           MNK+FSRKL SRLSNSY NS  C+DCASF+T VRT NQN+ +GSF+TRP++DHSRSWSSH
Sbjct: 1   MNKLFSRKLVSRLSNSYANSLDCKDCASFSTLVRTHNQNHLFGSFVTRPIQDHSRSWSSH 60

Query: 61  RSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLV-GRSLFMGSPFSKLKFQLKPGFD 120
           RSF +KIHGFFS PVVGKRFI+NPSNT FKGS+KS+V  RSLF G+PFSKLKFQLKPGF 
Sbjct: 61  RSFAQKIHGFFSVPVVGKRFIVNPSNTYFKGSMKSVVESRSLFTGTPFSKLKFQLKPGFV 120

Query: 121 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL 180
           H+W GRR+WFQRLT N+VVLGLIIANVAVFLLWRIADPIFMSKNFTIS+ENVRSGRIHTL
Sbjct: 121 HQWGGRRSWFQRLTPNEVVLGLIIANVAVFLLWRIADPIFMSKNFTISLENVRSGRIHTL 180

Query: 181 ITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQAS 240
           ITSAFSH++ GHIVSNM+GLYFFGMNIG VFG EFLL LYLAGAIGGSAFYLAHHLFQA 
Sbjct: 181 ITSAFSHIDTGHIVSNMVGLYFFGMNIGNVFGSEFLLKLYLAGAIGGSAFYLAHHLFQAL 240

Query: 241 SSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGK 300
           SS+SR FWG+DP RA+GLGASGAVNAIMLLDIFLFPK+TLYL+FFIPVPAILLGIFLIGK
Sbjct: 241 SSKSRSFWGEDPVRAKGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGK 300

Query: 301 DMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           DMLR+LENDSQISGSAHLGGAAVAALAWARVRRGRF
Sbjct: 301 DMLRMLENDSQISGSAHLGGAAVAALAWARVRRGRF 336

[Close]

BLAST of CmoCh13G011110 vs. TrEMBL
Match: M5WCB7_PRUPE (Rhomboid-like protein OS=Prunus persica GN=PRUPE_ppa015911mg PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.8e-104
Identity = 205/344 (59.59%), Postives = 249/344 (72.38%), Query Frame = 1


Query: 1   MNKIFSRKLASRLSNSYGNSHYCRDCASFATQVRTG--------NQNYFYGSFITRPVKD 60
           M ++   KLAS L     NS      + F  Q             +NYF+ SF T P+  
Sbjct: 1   MQRLLRLKLASNLPKKLSNSTTTTTSSIFHFQPHKTLSLTKPPQTRNYFFSSFTTPPLHH 60

Query: 61  HSRSWSSHRSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSL-FMGSPFSKLK 120
           H  SW S  + T+KI+GF   P++ ++F +  SNTL + S KSL    L F+ + F K  
Sbjct: 61  HLHSWRSQHTLTQKINGFLFNPLLKRQFCMGFSNTLLRVSSKSLSDFRLGFLRAQFPKQS 120

Query: 121 FQLKPGFDHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENV 180
           F+  P F    S  R+WF+R++  DVVLGLIIANVAVF+LWRIADP FM+KNFTIS++NV
Sbjct: 121 FRFNPNFTSPRSPWRSWFRRVSDGDVVLGLIIANVAVFILWRIADPSFMAKNFTISLDNV 180

Query: 181 RSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYL 240
            SGR+HTLITSAFSH+++GHI+SNMIGLYFFG NIGRVFGPEFLL LYLAGA+GGS  +L
Sbjct: 181 TSGRLHTLITSAFSHMDVGHIISNMIGLYFFGTNIGRVFGPEFLLKLYLAGAVGGSVCFL 240

Query: 241 AHHLFQASSSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAIL 300
            H  + A+SS+ R  W  DP++  GLGASGAVNAIMLLDIFLFPKSTLYLEF IPVPAIL
Sbjct: 241 VHKAYMAASSKGRQPWNMDPSKIPGLGASGAVNAIMLLDIFLFPKSTLYLEFIIPVPAIL 300

Query: 301 LGIFLIGKDMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           LGIFLIGKD+L I+E DS ISG+AHLGGAAVAA+AWAR+R+GRF
Sbjct: 301 LGIFLIGKDVLGIIEGDSHISGAAHLGGAAVAAIAWARLRKGRF 344

[Close]

BLAST of CmoCh13G011110 vs. TrEMBL
Match: A0A061FUJ8_THECC (Rhomboid-like protein OS=Theobroma cacao GN=TCM_011956 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.4e-95
Identity = 192/309 (62.14%), Postives = 227/309 (73.46%), Query Frame = 1


Query: 28  SFATQVRTGNQNYFYGSFITRPVKDHSRSWSSHRSFTEKIHGFFSGPVVGKRFILNPSNT 87
           +F++  +    N F  S  + P   HS  W S  S T +I GF S PVV KRF LN S+ 
Sbjct: 35  TFSSIAKPTVDNQFLNSSFSHPFHHHSFPWRSQLSLTGEIRGFLSYPVVAKRFWLNFSSI 94

Query: 88  LFKGSIKSLVG-RSLFMGSPFSKLKFQLKPGFDHRWSGRRAWFQRLTTNDVVLGLIIANV 147
             K S KSL+G R  F+     + +F     F  + S  R WFQRLT +D+VLGLII NV
Sbjct: 95  HLKTSGKSLLGCRVWFLRPQIPRGRFD----FGLQTSRWRLWFQRLTASDMVLGLIITNV 154

Query: 148 AVFLLWRIADPIFMSKNFTISVENVRSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNI 207
           AVFLLWRIAD  FM  NF +S++N +SGR+HTLITSAFSH++I HI+SNMIGLYFFG NI
Sbjct: 155 AVFLLWRIADRKFMMNNFMVSLDNFKSGRLHTLITSAFSHIDIEHIISNMIGLYFFGSNI 214

Query: 208 GRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQASSSESRPFWGKDPARAQGLGASGAVNAI 267
           GR+FGPE+LL LYLAGAIGGS FYL HH F A SS+    W  DP++  GLGASGAVNAI
Sbjct: 215 GRIFGPEYLLKLYLAGAIGGSVFYLVHHAFLALSSKGHAMWMMDPSKTPGLGASGAVNAI 274

Query: 268 MLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGKDMLRILENDSQISGSAHLGGAAVAALA 327
           MLLDIFL PK+TLY +F IPVPA+LLGIFLIGKD+LRI+E +S ISGSAHLGGAAVAA+A
Sbjct: 275 MLLDIFLNPKATLYFDFIIPVPAMLLGIFLIGKDVLRIIEGNSHISGSAHLGGAAVAAIA 334

Query: 328 WARVRRGRF 336
           WAR+RRGRF
Sbjct: 335 WARLRRGRF 339

[Close]

BLAST of CmoCh13G011110 vs. TrEMBL
Match: F6GTD8_VITVI (Rhomboid-like protein OS=Vitis vinifera GN=VIT_17s0000g05140 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.3e-95
Identity = 182/277 (65.70%), Postives = 213/277 (76.90%), Query Frame = 1


Query: 57  WSSHRSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSL-FMGSPFSKLKFQLK 116
           W SH   +  ++GF S P + K+F+      L KGS K+L    + F+ + F +  F   
Sbjct: 58  WPSHHGLSRSVYGFISNPTLLKQFL---PTALLKGSSKTLAASRVGFLRAQFPRRSFGFS 117

Query: 117 PGFDHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGR 176
           P FD      R+W   L+TNDVVLGLIIANVAVF+LWRI+D  FM  NFTIS++N +SGR
Sbjct: 118 PSFDSYGRRWRSWLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGR 177

Query: 177 IHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHL 236
           IHTLITSAFSH++IGH++SNMIGLYFFGMNIGRVFGPEFLL LYLAGA+ GS FYL HH 
Sbjct: 178 IHTLITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHA 237

Query: 237 FQASSSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIF 296
           F A SS+ +  W  +P+   GLGASGAVNAIMLLDIFLFP+STLYLEFFIPVPAILLGIF
Sbjct: 238 FMAPSSKGQQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIF 297

Query: 297 LIGKDMLRILENDSQISGSAHLGGAAVAALAWARVRR 333
           LIGKDMLRI+E D QISGSAHLGGAAVAA+AW R+RR
Sbjct: 298 LIGKDMLRIIEGDDQISGSAHLGGAAVAAIAWTRLRR 331

[Close]

BLAST of CmoCh13G011110 vs. TrEMBL
Match: A0A0A7E7Z9_LONJA (Rhomboid-like protein OS=Lonicera japonica PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 185/302 (61.26%), Postives = 225/302 (74.50%), Query Frame = 1


Query: 40  YFYGSFITRPVKDHSRSWSSHRSFTEKIHGFFSGPVVGKRFILN--PSNTLFKGS-IKSL 99
           +F+    +     +SR W       +KIHGF S P++ K   L+  PSN L KG  IK+L
Sbjct: 57  HFFSHSSSSSSSSYSRLW-----VYQKIHGFLSNPILVKLVSLSLLPSNALLKGPPIKAL 116

Query: 100 VGRSLFMG---SPFSKLKFQLKPGFDHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWR 159
           +  S  +G     FS+  FQL P FD+     ++W +R + +DVVLGLI+ANVAVF+LWR
Sbjct: 117 LDCSRVVGFLRPQFSRRSFQLNPSFDYHRRSWQSWLRRFSPDDVVLGLILANVAVFMLWR 176

Query: 160 IADPIFMSKNFTISVENVRSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPE 219
           +AD  FM KNF IS++N RSGR+HT+ITSAFSH+E+ HI+SNMIGLYFFG +I R FGPE
Sbjct: 177 VADRDFMRKNFMISLDNFRSGRVHTMITSAFSHIEVEHIISNMIGLYFFGTSIARYFGPE 236

Query: 220 FLLGLYLAGAIGGSAFYLAHHLFQASSSESRPFWGKDPARAQGLGASGAVNAIMLLDIFL 279
           FLL LYL+GA+ GS FYL HH F ++SSE +  W  DP+R  GLGASGAVNAIMLLDIFL
Sbjct: 237 FLLKLYLSGAVAGSVFYLVHHAFMSASSEGKRMWSHDPSRTPGLGASGAVNAIMLLDIFL 296

Query: 280 FPKSTLYLEFFIPVPAILLGIFLIGKDMLRILENDSQISGSAHLGGAAVAALAWARVRRG 336
           FP+ TLYLEF IPVPAILLGIFLIGKD LR+L+ DS ISGSAHLGGAAVAA+AWAR+RRG
Sbjct: 297 FPRKTLYLEFIIPVPAILLGIFLIGKDTLRVLQGDSHISGSAHLGGAAVAAVAWARLRRG 353

[Close]

BLAST of CmoCh13G011110 vs. TAIR10
Match: AT1G18600.1 (AT1G18600.1 RHOMBOID-like protein 12)

HSP 1 Score: 313.2 bits (801), Expect = 2.0e-85
Identity = 185/338 (54.73%), Postives = 230/338 (68.05%), Query Frame = 1


Query: 6   SRKLASRLSNSYGNSHYCRDCASFA---TQVRTGNQNYFYGSFITRPVK--DHSRSWSSH 65
           S +L   L+N   +SH  R   +      Q R    +Y   S  + PV   D S+ W S 
Sbjct: 14  SSRLTKLLANPTTHSHLNRQTFTSLYKPNQSRHFRTHYLPSSPSSPPVSRFDPSQLWRS- 73

Query: 66  RSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSLFMGSPFSK--LKFQLKPGF 125
               EKI GFF+  +  K   L          ++S VG   F+GS F K   +FQ   GF
Sbjct: 74  ----EKIRGFFASALGNKAVKLG-------NLVESRVG---FIGSQFPKKGFEFQRFSGF 133

Query: 126 DHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHT 185
             R  G + W Q L+  DVVLGL+IAN  VF++WR+ +  FM  NF IS++N +SGR+HT
Sbjct: 134 QRR--GWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLHT 193

Query: 186 LITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQA 245
           LITSAFSH++IGHIVSNMIGLYFFG +I R FGP+FLL LYLAGA+GGS FYL HH + A
Sbjct: 194 LITSAFSHIDIGHIVSNMIGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAYMA 253

Query: 246 SSS-ESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLI 305
           ++S + +  + +DP+R  GLGASGAVNAIMLLDIFL P++TLYLEFFIPVPA+LLGIFLI
Sbjct: 254 ATSPKGQGAFVRDPSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLI 313

Query: 306 GKDMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           GKD+LRI E +S ISGSAHLGGAAVAA+AWAR+R+GRF
Sbjct: 314 GKDILRITEGNSNISGSAHLGGAAVAAIAWARIRKGRF 334

[Close]

BLAST of CmoCh13G011110 vs. TAIR10
Match: AT1G74130.1 (AT1G74130.1 Rhomboid-related intramembrane serine protease family protein)

HSP 1 Score: 181.8 bits (460), Expect = 7.0e-46
Identity = 114/282 (40.43%), Postives = 161/282 (57.09%), Query Frame = 1


Query: 62  SFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSLFMGSPFSKLKFQLK--PGFD 121
           S + ++HGFF+G +      L   N +          R+ F  S      F+     GF 
Sbjct: 52  SRSARVHGFFAGKLGNTNLKLKFGNVM--------ESRAGFFSSELPSHGFESGGFTGFQ 111

Query: 122 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIA--DPIFMSKNFTISVENVRSGRIH 181
            R  G ++W      N VV GL+IAN AVF +WR+   D ++M KNF +S  +  +GRIH
Sbjct: 112 KR--GWKSWING--ANGVVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIH 171

Query: 182 TLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQ 241
           TLITS FSHV   HI+ NM+GL +FG  I R FGP +LL LY AGA+GGS F+L+ H   
Sbjct: 172 TLITSGFSHVGATHIILNMMGLCYFGARIARSFGPRYLLKLYFAGALGGSVFFLSSHALS 231

Query: 242 ASSSESRPFWGKDPARAQ--GLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIF 301
             S + +    KD  +     LGA+G V AI LLD+ L+PK T Y    + VP +  GI+
Sbjct: 232 VISLKGQRVVPKDQLKVPIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP-VFAGIY 291

Query: 302 LIGKDMLRILE--NDSQISGSAHLGGAAVAALAWARVRRGRF 336
            +G +++++LE  N++ ++    LGG  VA +AWAR+R+GRF
Sbjct: 292 SLGLNIIKMLEGKNNNTLTSLDQLGGVVVAVIAWARIRKGRF 320

[Close]

BLAST of CmoCh13G011110 vs. TAIR10
Match: AT1G74140.5 (AT1G74140.5 Rhomboid-related intramembrane serine protease family protein)

HSP 1 Score: 154.8 bits (390), Expect = 9.1e-38
Identity = 105/281 (37.37%), Postives = 149/281 (53.02%), Query Frame = 1


Query: 62  SFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSLFMGSPFSKLKFQLK--PGFD 121
           S + K+HGFF+  +      L   N +          R+ F  S      F+     GF 
Sbjct: 58  SRSAKVHGFFASKLGNTNLKLKFGNVM--------ESRAGFFSSELPSHGFESGGFTGFQ 117

Query: 122 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL 181
            R  G ++W      N VV GL+IAN AVF +WR++D     +++ +S  +  SG IHTL
Sbjct: 118 KR--GWKSWING--ANGVVFGLVIANAAVFTMWRVSD-----RSWMLSTYSFTSGYIHTL 177

Query: 182 ITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQAS 241
           ITS FSH+    I+ NMIG+ +FG  I R  GP +LL LY AGA+GGS  +L++H   A+
Sbjct: 178 ITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLAT 237

Query: 242 SSESRPFWGKDPARA---QGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFL 301
                       + A   Q LGA G++ AI LLD+F++PK T Y    + V  ++  I  
Sbjct: 238 LKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFALMLRV-HVMFRIIN 297

Query: 302 IGKDMLRILENDSQ--ISGSAHLGGAAVAALAWARVRRGRF 336
           +G ++L I E       S S  LGG  VAA+AWAR+++GRF
Sbjct: 298 LGVEILNIPEGGPNHIASSSGQLGGVVVAAMAWARIKKGRF 320

[Close]

BLAST of CmoCh13G011110 vs. NCBI nr
Match: gi|659066598|ref|XP_008452017.1| (PREDICTED: uncharacterized protein C13E7.11 [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 4.3e-162
Identity = 290/336 (86.31%), Postives = 313/336 (93.15%), Query Frame = 1


Query: 1   MNKIFSRKLASRLSNSYGNSHYCRDCASFATQVRTGNQNYFYGSFITRPVKDHSRSWSSH 60
           MNK+FSRKLASRLSNSY NS YC+DCASF+T  RT NQN+ +GSF+TRP++DHSRSWSSH
Sbjct: 1   MNKLFSRKLASRLSNSYANSIYCKDCASFSTLGRTHNQNHLFGSFVTRPLQDHSRSWSSH 60

Query: 61  RSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLV-GRSLFMGSPFSKLKFQLKPGFD 120
           RSF +KIHGFFS PVVGKR ++NPSNT FKGS+KS+V  RSLF G+PFSKLKFQLKPGF 
Sbjct: 61  RSFVQKIHGFFSVPVVGKRLMVNPSNTHFKGSMKSVVESRSLFTGTPFSKLKFQLKPGFV 120

Query: 121 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL 180
           H+W GRR+WFQRLT  DVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL
Sbjct: 121 HQWGGRRSWFQRLTPKDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL 180

Query: 181 ITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQAS 240
           ITSAFSH++ GH++SNMIGLYFFGMNIG VFG EFLL LYLAGAIGGSAFYLAHHLFQAS
Sbjct: 181 ITSAFSHIDTGHLISNMIGLYFFGMNIGSVFGSEFLLKLYLAGAIGGSAFYLAHHLFQAS 240

Query: 241 SSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGK 300
           SS+SR FWGKDP RAQGLGASGAVNAIMLLDIFLFPK+TLYL+FFIPVPAILLGIFLIGK
Sbjct: 241 SSKSRSFWGKDPVRAQGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGK 300

Query: 301 DMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           DMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF
Sbjct: 301 DMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336

[Close]

BLAST of CmoCh13G011110 vs. NCBI nr
Match: gi|449439341|ref|XP_004137444.1| (PREDICTED: uncharacterized protein C13E7.11 [Cucumis sativus])

HSP 1 Score: 575.9 bits (1483), Expect = 4.7e-161
Identity = 287/336 (85.42%), Postives = 313/336 (93.15%), Query Frame = 1


Query: 1   MNKIFSRKLASRLSNSYGNSHYCRDCASFATQVRTGNQNYFYGSFITRPVKDHSRSWSSH 60
           MNK+FSRKL SRLSNSY NS  C+DCASF+T VRT NQN+ +GSF+TRP++DHSRSWSSH
Sbjct: 1   MNKLFSRKLVSRLSNSYANSLDCKDCASFSTLVRTHNQNHLFGSFVTRPIQDHSRSWSSH 60

Query: 61  RSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLV-GRSLFMGSPFSKLKFQLKPGFD 120
           RSF +KIHGFFS PVVGKRFI+NPSNT FKGS+KS+V  RSLF G+PFSKLKFQLKPGF 
Sbjct: 61  RSFAQKIHGFFSVPVVGKRFIVNPSNTYFKGSMKSVVESRSLFTGTPFSKLKFQLKPGFV 120

Query: 121 HRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTL 180
           H+W GRR+WFQRLT N+VVLGLIIANVAVFLLWRIADPIFMSKNFTIS+ENVRSGRIHTL
Sbjct: 121 HQWGGRRSWFQRLTPNEVVLGLIIANVAVFLLWRIADPIFMSKNFTISLENVRSGRIHTL 180

Query: 181 ITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQAS 240
           ITSAFSH++ GHIVSNM+GLYFFGMNIG VFG EFLL LYLAGAIGGSAFYLAHHLFQA 
Sbjct: 181 ITSAFSHIDTGHIVSNMVGLYFFGMNIGNVFGSEFLLKLYLAGAIGGSAFYLAHHLFQAL 240

Query: 241 SSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGK 300
           SS+SR FWG+DP RA+GLGASGAVNAIMLLDIFLFPK+TLYL+FFIPVPAILLGIFLIGK
Sbjct: 241 SSKSRSFWGEDPVRAKGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGK 300

Query: 301 DMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           DMLR+LENDSQISGSAHLGGAAVAALAWARVRRGRF
Sbjct: 301 DMLRMLENDSQISGSAHLGGAAVAALAWARVRRGRF 336

[Close]

BLAST of CmoCh13G011110 vs. NCBI nr
Match: gi|645269658|ref|XP_008240098.1| (PREDICTED: uncharacterized protein C13E7.11-like isoform X1 [Prunus mume])

HSP 1 Score: 388.3 bits (996), Expect = 1.4e-104
Identity = 196/299 (65.55%), Postives = 236/299 (78.93%), Query Frame = 1


Query: 38  QNYFYGSFITRPVKDHSRSWSSHRSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLV 97
           QNYF+ SF   P+  H  SW S  + T+KI+GF   P++ ++F +  SNTL + S KSL 
Sbjct: 47  QNYFFSSFTAHPLHHHLHSWRSQHTLTQKINGFLFNPLLKRQFCMGFSNTLLRVSSKSLS 106

Query: 98  G-RSLFMGSPFSKLKFQLKPGFDHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIAD 157
             R  F+ + F K  F+  P F    S  R+WF+R++  DVVLGLIIANVAVF+LWRIAD
Sbjct: 107 DFRLSFLRAQFPKQSFRFNPNFTSPRSPWRSWFRRVSDGDVVLGLIIANVAVFILWRIAD 166

Query: 158 PIFMSKNFTISVENVRSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLL 217
           P FM+KNFTIS++NV SGR+HTLITSAFSH+++GHI+SNMIGLYFFG NIGRVFGPEFLL
Sbjct: 167 PSFMAKNFTISLDNVTSGRLHTLITSAFSHMDVGHIISNMIGLYFFGTNIGRVFGPEFLL 226

Query: 218 GLYLAGAIGGSAFYLAHHLFQASSSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPK 277
            LYLAGA+GGS  +L H  + A+SS+ R  W  DP++  GLGASGAVNAIMLLDIFLFPK
Sbjct: 227 KLYLAGAVGGSVCFLVHKAYMAASSKGRQPWNMDPSKIPGLGASGAVNAIMLLDIFLFPK 286

Query: 278 STLYLEFFIPVPAILLGIFLIGKDMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           STLYLEF IPVPAILLGIFLIGKD+LRI+E DS ISG+AHLGGAAVAA+AWAR+R+GRF
Sbjct: 287 STLYLEFIIPVPAILLGIFLIGKDVLRIIEGDSHISGAAHLGGAAVAAIAWARLRKGRF 345

[Close]

BLAST of CmoCh13G011110 vs. NCBI nr
Match: gi|595851906|ref|XP_007210208.1| (hypothetical protein PRUPE_ppa015911mg [Prunus persica])

HSP 1 Score: 386.7 bits (992), Expect = 4.0e-104
Identity = 205/344 (59.59%), Postives = 249/344 (72.38%), Query Frame = 1


Query: 1   MNKIFSRKLASRLSNSYGNSHYCRDCASFATQVRTG--------NQNYFYGSFITRPVKD 60
           M ++   KLAS L     NS      + F  Q             +NYF+ SF T P+  
Sbjct: 1   MQRLLRLKLASNLPKKLSNSTTTTTSSIFHFQPHKTLSLTKPPQTRNYFFSSFTTPPLHH 60

Query: 61  HSRSWSSHRSFTEKIHGFFSGPVVGKRFILNPSNTLFKGSIKSLVGRSL-FMGSPFSKLK 120
           H  SW S  + T+KI+GF   P++ ++F +  SNTL + S KSL    L F+ + F K  
Sbjct: 61  HLHSWRSQHTLTQKINGFLFNPLLKRQFCMGFSNTLLRVSSKSLSDFRLGFLRAQFPKQS 120

Query: 121 FQLKPGFDHRWSGRRAWFQRLTTNDVVLGLIIANVAVFLLWRIADPIFMSKNFTISVENV 180
           F+  P F    S  R+WF+R++  DVVLGLIIANVAVF+LWRIADP FM+KNFTIS++NV
Sbjct: 121 FRFNPNFTSPRSPWRSWFRRVSDGDVVLGLIIANVAVFILWRIADPSFMAKNFTISLDNV 180

Query: 181 RSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLGLYLAGAIGGSAFYL 240
            SGR+HTLITSAFSH+++GHI+SNMIGLYFFG NIGRVFGPEFLL LYLAGA+GGS  +L
Sbjct: 181 TSGRLHTLITSAFSHMDVGHIISNMIGLYFFGTNIGRVFGPEFLLKLYLAGAVGGSVCFL 240

Query: 241 AHHLFQASSSESRPFWGKDPARAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAIL 300
            H  + A+SS+ R  W  DP++  GLGASGAVNAIMLLDIFLFPKSTLYLEF IPVPAIL
Sbjct: 241 VHKAYMAASSKGRQPWNMDPSKIPGLGASGAVNAIMLLDIFLFPKSTLYLEFIIPVPAIL 300

Query: 301 LGIFLIGKDMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF 336
           LGIFLIGKD+L I+E DS ISG+AHLGGAAVAA+AWAR+R+GRF
Sbjct: 301 LGIFLIGKDVLGIIEGDSHISGAAHLGGAAVAAIAWARLRKGRF 344

[Close]

BLAST of CmoCh13G011110 vs. NCBI nr
Match: gi|694317385|ref|XP_009338077.1| (PREDICTED: rhomboid protein 1, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 373.6 bits (958), Expect = 3.5e-100
Identity = 195/314 (62.10%), Postives = 228/314 (72.61%), Query Frame = 1


Query: 23  CRDCASFATQVRTGNQNYFYGSFITRPVKDHSRSWSSHRSFTEKIHGFFSGPVVGKRFIL 82
           C    S A      NQN+F+ SF   P++ H   W S  +  +KIHGF S   + K+  L
Sbjct: 36  CHKTFSLAKPPIAQNQNHFFSSFPALPLRHHPHPWRSQHTLAQKIHGFLSNSSLRKQSFL 95

Query: 83  NPSNTLFKGSIKSLVGRSL-FMGSPFSKLKFQLKPGFDHRWSGRRAWFQRLTTNDVVLGL 142
             SNTL + S KSL    L F+ + F K  F+    F    S  R WF RL+ N+VVLGL
Sbjct: 96  GFSNTLLRASSKSLSDCRLGFLRAQFPKRSFKFNQNFTSHRSPWRLWFGRLSNNEVVLGL 155

Query: 143 IIANVAVFLLWRIADPIFMSKNFTISVENVRSGRIHTLITSAFSHVEIGHIVSNMIGLYF 202
           I+ANVAVFLLWRIAD  FM  NFTIS+ N  SGR+HTLITSAFSH++ GHI+SNMIGLYF
Sbjct: 156 IVANVAVFLLWRIADRSFMMNNFTISLHNFASGRLHTLITSAFSHIDAGHIISNMIGLYF 215

Query: 203 FGMNIGRVFGPEFLLGLYLAGAIGGSAFYLAHHLFQASSSESRPFWGKDPARAQGLGASG 262
           FGMNIGRVFGPEFLL LYLAGA+GGS F+L H  F A+SS+ R  W  + A+  GLGASG
Sbjct: 216 FGMNIGRVFGPEFLLKLYLAGAVGGSVFFLVHKAFLATSSQGRKPWNTEAAKIPGLGASG 275

Query: 263 AVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGKDMLRILENDSQISGSAHLGGAA 322
           AVNAIMLLDIFLFPK+TLYLEF IPVPAILLGIFLIG D+LRI+E D  ISG+AHLGGAA
Sbjct: 276 AVNAIMLLDIFLFPKATLYLEFIIPVPAILLGIFLIGNDVLRIIEGDRHISGAAHLGGAA 335

Query: 323 VAALAWARVRRGRF 336
           VAA+AWAR+R+GRF
Sbjct: 336 VAAIAWARLRKGRF 349

The following BLAST results are available for this feature:

BLAST of CmoCh13G011110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL12_ARATH	3.6e-84	54.73	RHOMBOID-like protein 12, mitochondrial OS=Arabidopsis thaliana GN=RBL12 PE=2 SV...	[more]
RBL16_ARATH	1.2e-44	40.43	Rhomboid-like protein 16, chloroplastic OS=Arabidopsis thaliana GN=RBL16 PE=2 SV...	[more]
RBL17_ARATH	1.6e-36	37.37	Rhomboid-like protein 17, chloroplastic OS=Arabidopsis thaliana GN=RBL17 PE=2 SV...	[more]
PCP1_YEAST	1.4e-08	27.35	Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]
YOHB_SCHPO	1.4e-08	29.00	Uncharacterized protein C13E7.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of CmoCh13G011110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTI7_CUCSA	3.3e-161	85.42	Rhomboid-like protein OS=Cucumis sativus GN=Csa_1G039320 PE=3 SV=1	[more]
M5WCB7_PRUPE	2.8e-104	59.59	Rhomboid-like protein OS=Prunus persica GN=PRUPE_ppa015911mg PE=3 SV=1	[more]
A0A061FUJ8_THECC	2.4e-95	62.14	Rhomboid-like protein OS=Theobroma cacao GN=TCM_011956 PE=3 SV=1	[more]
F6GTD8_VITVI	5.3e-95	65.70	Rhomboid-like protein OS=Vitis vinifera GN=VIT_17s0000g05140 PE=3 SV=1	[more]
A0A0A7E7Z9_LONJA	1.2e-94	61.26	Rhomboid-like protein OS=Lonicera japonica PE=2 SV=1	[more]

BLAST of CmoCh13G011110 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18600.1	2.0e-85	54.73	RHOMBOID-like protein 12	[more]
AT1G74130.1	7.0e-46	40.43	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G74140.5	9.1e-38	37.37	Rhomboid-related intramembrane serine protease family protein	[more]

BLAST of CmoCh13G011110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066598\|ref\|XP_008452017.1\|	4.3e-162	86.31	PREDICTED: uncharacterized protein C13E7.11 [Cucumis melo]	[more]
gi\|449439341\|ref\|XP_004137444.1\|	4.7e-161	85.42	PREDICTED: uncharacterized protein C13E7.11 [Cucumis sativus]	[more]
gi\|645269658\|ref\|XP_008240098.1\|	1.4e-104	65.55	PREDICTED: uncharacterized protein C13E7.11-like isoform X1 [Prunus mume]	[more]
gi\|595851906\|ref\|XP_007210208.1\|	4.0e-104	59.59	hypothetical protein PRUPE_ppa015911mg [Prunus persica]	[more]
gi\|694317385\|ref\|XP_009338077.1\|	3.5e-100	62.10	PREDICTED: rhomboid protein 1, mitochondrial-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G011110.1	CmoCh13G011110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 107..232 score: 1.6E-110coord: 249..335 score: 1.6E
IPR022764	Peptidase S54, rhomboid domain	GENE3D	G3DSA:1.20.1540.10		coord: 134..326 score: 7.7
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 172..329 score: 5.9
None	No IPR available	PANTHER	PTHR22936:SF17	F25I16.6 PROTEIN-RELATED	coord: 249..335 score: 1.6E-110coord: 107..232 score: 1.6E
None	No IPR available	unknown	SSF144091	Rhomboid-like	coord: 134..331 score: 5.36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G011110	Cucsa.113340	Cucumber (Gy14) v1	cgycmoB0262
CmoCh13G011110	CmaCh13G010670	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G011110	Cla018552	Watermelon (97103) v1	cmowmB194
CmoCh13G011110	Csa1G039320	Cucumber (Chinese Long) v2	cmocuB202
CmoCh13G011110	MELO3C002041	Melon (DHL92) v3.5.1	cmomeB180
CmoCh13G011110	ClCG04G011680	Watermelon (Charleston Gray)	cmowcgB191
CmoCh13G011110	CSPI01G06250	Wild cucumber (PI 183967)	cmocpiB204
CmoCh13G011110	Lsi02G001290	Bottle gourd (USVL1VR-Ls)	cmolsiB198
CmoCh13G011110	MELO3C002041.2	Melon (DHL92) v3.6.1	cmomedB202
CmoCh13G011110	CsaV3_1G006110	Cucumber (Chinese Long) v3	cmocucB0234
CmoCh13G011110	Cla97C04G078530	Watermelon (97103) v2	cmowmbB216
CmoCh13G011110	Bhi08G000901	Wax gourd	cmowgoB0247
CmoCh13G011110	CsGy1G005950	Cucumber (Gy14) v2	cgybcmoB067
CmoCh13G011110	Carg04769	Silver-seed gourd	carcmoB0526

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G011110	Cucumber (Chinese Long) v3	cmocucB0242
CmoCh13G011110	Cucumber (Chinese Long) v3	cmocucB0247
CmoCh13G011110	Cucumber (Chinese Long) v3	cmocucB0252
CmoCh13G011110	Watermelon (97103) v2	cmowmbB222
CmoCh13G011110	Wax gourd	cmowgoB0275
CmoCh13G011110	Cucurbita moschata (Rifu)	cmocmoB052
CmoCh13G011110	Cucurbita moschata (Rifu)	cmocmoB089
CmoCh13G011110	Cucurbita moschata (Rifu)	cmocmoB171
CmoCh13G011110	Cucurbita moschata (Rifu)	cmocmoB188
CmoCh13G011110	Cucumber (Gy14) v1	cgycmoB0585
CmoCh13G011110	Cucurbita maxima (Rimu)	cmacmoB399
CmoCh13G011110	Cucurbita maxima (Rimu)	cmacmoB082
CmoCh13G011110	Cucurbita maxima (Rimu)	cmacmoB125
CmoCh13G011110	Cucumber (Chinese Long) v2	cmocuB210
CmoCh13G011110	Melon (DHL92) v3.5.1	cmomeB191
CmoCh13G011110	Watermelon (Charleston Gray)	cmowcgB195
CmoCh13G011110	Watermelon (97103) v1	cmowmB202
CmoCh13G011110	Cucurbita pepo (Zucchini)	cmocpeB183
CmoCh13G011110	Cucurbita pepo (Zucchini)	cmocpeB196
CmoCh13G011110	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G011110	Cucurbita pepo (Zucchini)	cmocpeB212
CmoCh13G011110	Bottle gourd (USVL1VR-Ls)	cmolsiB206
CmoCh13G011110	Bottle gourd (USVL1VR-Ls)	cmolsiB210
CmoCh13G011110	Cucumber (Gy14) v2	cgybcmoB453
CmoCh13G011110	Melon (DHL92) v3.6.1	cmomedB213
CmoCh13G011110	Melon (DHL92) v3.6.1	cmomedB216
CmoCh13G011110	Silver-seed gourd	carcmoB0626
CmoCh13G011110	Silver-seed gourd	carcmoB0698
CmoCh13G011110	Silver-seed gourd	carcmoB0810