CmoCh13G007860 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G007860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ankyrin repeat family protein
Location	Cmo_Chr13 : 7515056 .. 7516463 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTAATTTCTACGAAGCTTCATCGTCGATGCAAGTGAACATGAACCGATGATTGTTGATGATAAAACTTCCCATCACAAGATGGGTATTCAACGGGTTAGAGCTAAACTCCACAGCTTCAATATTCATGAAAGTAAGCTTTCTGTAATGACTTGAAATTTTCTACTTAATTTAAGGTCGTTATTGTATACGTACCATAAATATTGAATACGGAAGATTTATTTAAAAACATCTTTAACACGACACAACAAAAGACCTGAAATAAAATAAAGAAGCATTTAAGTTAAAAACATAGCCTAAGGAAAATAAATATCTCTCTTATGCATGTGTCATGGTCTCGAGTTGTGTGTGTCATCCTTGCCATGCTAATCTCCTCTATATCTTCCAATTTTATCGGATGCCCTGTTAGTGTGATGTCCCACGTTGGTTGGGGAGGAAAACAAACCAACATTTATAAGGGTGTGGAAACCTTCCCTTGGTAGACGTGTTAAAGCCCAAAGACGACAATATCTACTAGTAGTGGATCTGTGCCATTACACTTTCATTTATTTGAATTCAATCTAACACAAACAATCGTATTAGATTGAATCGATCAAGTTTTGTTCGAACGTGTTTACTAAACTTATATATTAATATTTTCTAGGGAACCTAAGAATGGACCATCCTCGGCAGCATATTTGGCTATGCGATGCTGCAACTAGAGGTGACTGGAAGGCTGCGGAGGACATCGAAAAGGAACATAAAGGAATCCTTTCAGAGGTAATAAATAAGGATAGAAAAGAAACAGCTCTCCACATTGCCACCAGATTCAACCAGGCTGCGTTCGTGGAGAAGCTGGTTCAAAAACTGACCAAAAACGACTTGGAAGCCACAAATATATACGGAAACACAGCCCTTTGCATAGCTGCGACATCAGGCGCTGTGGATATTGCCAAGTTCATGGTGCGGAAGCATAACAATTTAGTCCTAATTCGTGGCTCTGGAAATGCCACCCCTGTTTTAATTGCTGCTAGATATAAACACAACCATATGGTATCTTATTTCCTCCAAATGAAATGGATCATTGAAGAAATGGAAATTAACGACCAAATGGAGCTTCTTCTTAGTGCCATTGCCACCGACCATTACGGTTCGTTTTTACTCACAAAATTTAATTTTTATCAATCGAGTCGGTTTAAAATACTTTTTTATTTAGTCCGAACTCTTAATTATTGTGTCTTTTTTATTTTTTTTTACTCTACAGATATAGCTTTGCTTATTCTAAAGTGGAAGCAGAAATTAGCATTAGAACGAGACGTCAACGACGATACACCCTTACATATAATGGCCCGAAAAACTAACGCAATTGGCACAAATAATGACCCAACCAAGTGGCAATCATCGATCAGTAGATATATATTGTAA

mRNA sequence

ATGGCGGTAATTTCTACGAAGCTTCATCGTCGATGCAAAGGTGACTGGAAGGCTGCGGAGGACATCGAAAAGGAACATAAAGGAATCCTTTCAGAGGTAATAAATAAGGATAGAAAAGAAACAGCTCTCCACATTGCCACCAGATTCAACCAGGCTGCGTTCGTGGAGAAGCTGGTTCAAAAACTGACCAAAAACGACTTGGAAGCCACAAATATATACGGAAACACAGCCCTTTGCATAGCTGCGACATCAGGCGCTGTGGATATTGCCAAGTTCATGGTGCGGAAGCATAACAATTTAGTCCTAATTCGTGGCTCTGGAAATGCCACCCCTGTTTTAATTGCTGCTAGATATAAACACAACCATATGGTATCTTATTTCCTCCAAATGAAATGGATCATTGAAGAAATGGAAATTAACGACCAAATGGAGCTTCTTCTTAGTGCCATTGCCACCGACCATTACGATATAGCTTTGCTTATTCTAAAGTGGAAGCAGAAATTAGCATTAGAACGAGACGTCAACGACGATACACCCTTACATATAATGGCCCGAAAAACTAACGCAATTGGCACAAATAATGACCCAACCAAGTGGCAATCATCGATCAGTAGATATATATTGTAA

Coding sequence (CDS)

ATGGCGGTAATTTCTACGAAGCTTCATCGTCGATGCAAAGGTGACTGGAAGGCTGCGGAGGACATCGAAAAGGAACATAAAGGAATCCTTTCAGAGGTAATAAATAAGGATAGAAAAGAAACAGCTCTCCACATTGCCACCAGATTCAACCAGGCTGCGTTCGTGGAGAAGCTGGTTCAAAAACTGACCAAAAACGACTTGGAAGCCACAAATATATACGGAAACACAGCCCTTTGCATAGCTGCGACATCAGGCGCTGTGGATATTGCCAAGTTCATGGTGCGGAAGCATAACAATTTAGTCCTAATTCGTGGCTCTGGAAATGCCACCCCTGTTTTAATTGCTGCTAGATATAAACACAACCATATGGTATCTTATTTCCTCCAAATGAAATGGATCATTGAAGAAATGGAAATTAACGACCAAATGGAGCTTCTTCTTAGTGCCATTGCCACCGACCATTACGATATAGCTTTGCTTATTCTAAAGTGGAAGCAGAAATTAGCATTAGAACGAGACGTCAACGACGATACACCCTTACATATAATGGCCCGAAAAACTAACGCAATTGGCACAAATAATGACCCAACCAAGTGGCAATCATCGATCAGTAGATATATATTGTAA

Homology

[Close]

BLAST of CmoCh13G007860 vs. Swiss-Prot
Match: ANK2_MOUSE (Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 1


Query: 39  KETALHIATRFNQAAFVEKLVQKLTKNDLEATNIYGNTALCIAATSGAVDIAKFMVRKHN 98
           ++T LHIA+R  +   V+ L+Q +   D   TN  G T L I+A  G VD+A  ++    
Sbjct: 497 EQTPLHIASRLGKTEIVQLLLQHMAHPDAATTN--GYTPLHISAREGQVDVASVLLEAGA 556

Query: 99  NLVLIRGSGNATPVLIAARYKHNHMVSYFLQMKWIIEEMEINDQMELLLSAIATDHYD-- 158
              L    G  TP+ +AA+Y    +    LQ +   +    N    L ++A    HYD  
Sbjct: 557 AHSLATKKG-FTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAA----HYDNQ 616

Query: 159 -IALLILKWKQKLALERDVNDDTPLHIMARK 187
            +ALL+L+ K         N  TPLHI A+K
Sbjct: 617 KVALLLLE-KGASPHATAKNGYTPLHIAAKK 639

[Close]

BLAST of CmoCh13G007860 vs. Swiss-Prot
Match: ANK2_HUMAN (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 1


Query: 39  KETALHIATRFNQAAFVEKLVQKLTKNDLEATNIYGNTALCIAATSGAVDIAKFMVRKHN 98
           ++T LHIA+R  +   V+ L+Q +   D   TN  G T L I+A  G VD+A  ++    
Sbjct: 497 EQTPLHIASRLGKTEIVQLLLQHMAHPDAATTN--GYTPLHISAREGQVDVASVLLEAGA 556

Query: 99  NLVLIRGSGNATPVLIAARYKHNHMVSYFLQMKWIIEEMEINDQMELLLSAIATDHYD-- 158
              L    G  TP+ +AA+Y    +    LQ +   +    N    L ++A    HYD  
Sbjct: 557 AHSLATKKG-FTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAA----HYDNQ 616

Query: 159 -IALLILKWKQKLALERDVNDDTPLHIMARK 187
            +ALL+L+ K         N  TPLHI A+K
Sbjct: 617 KVALLLLE-KGASPHATAKNGYTPLHIAAKK 639

[Close]

BLAST of CmoCh13G007860 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.8e-75
Identity = 149/196 (76.02%), Postives = 175/196 (89.29%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQ-KLTKNDLEATN 72
           +GDWKAAE+IEK+ KGILSEVI+KDRKETALHIATRFN+AAFVEKL++ KLT+ DLEA N
Sbjct: 83  RGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKN 142

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNTALCIAATSGAVDIA+ M RKHN+LVL RGS NATPVLIAARYKH+HMVS+ L+ M
Sbjct: 143 IYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSM 202

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTN-A 192
             I+++MEI++QMELLLSAIA+DHYDIA LI++W + LAL RD ND TPLHIMARK+N  
Sbjct: 203 NKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNGT 262

Query: 193 IGTNNDPTKWQSSISR 206
           IGT N+PTKWQSSI++
Sbjct: 263 IGTKNNPTKWQSSINK 278

[Close]

BLAST of CmoCh13G007860 vs. TrEMBL
Match: A0A0A0LX18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 8.5e-59
Identity = 127/196 (64.80%), Postives = 153/196 (78.06%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGI-LSEVINKDRKETALHIATRFNQAAFVEKLVQKLTKNDLEATN 72
           KGDWKAAE + +EH+ I L +VI+KDRKETALHIATRFN  AFV+KL+ +LT+NDLEA N
Sbjct: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAKN 61

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNT LCIAA +GA DIAK MV +H  LVL RGSGNA P+LIAARYK  HMVSY L+ M
Sbjct: 62  IYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKAM 121

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTN-A 192
              I+++   D+ E+L S I+++ YDIALLILK    LALERD ND+TPLHIMA+K+N  
Sbjct: 122 NSHIKKLNDTDKKEILFSVISSNDYDIALLILKENDHLALERDDNDNTPLHIMAKKSNGT 181

Query: 193 IGTNNDPTKWQSSISR 206
           IGT N  T WQSSI++
Sbjct: 182 IGTKNKLTDWQSSINK 197

[Close]

BLAST of CmoCh13G007860 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.5e-55
Identity = 115/151 (76.16%), Postives = 135/151 (89.40%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQ-KLTKNDLEATN 72
           +GDWKAAE++EK++KGILS VI+KDRKETALHIATRFN+AAFVEKL++ KLT  DLEA N
Sbjct: 99  RGDWKAAEEMEKKNKGILSNVISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKN 158

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNTALCIAATSGAVDIAK MVRKHN+LVL RGS NATPVLIAARYKH+HMVS+ L+ M
Sbjct: 159 IYGNTALCIAATSGAVDIAKLMVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAM 218

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLI 162
             I+++MEI++QMELLLSAIA+DHY +   I
Sbjct: 219 DLIVQKMEISEQMELLLSAIASDHYGLLFKI 249

[Close]

BLAST of CmoCh13G007860 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35
Identity = 87/153 (56.86%), Postives = 112/153 (73.20%), Query Frame = 1


Query: 4   ISTKLHRRC-KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQKL 63
           +  K+H+   KGDW+ A+ +E  H G L+ VI+ +R ETALHIATR  +A+FVEKLV++L
Sbjct: 98  LRAKMHQAALKGDWEGAKQMEMMHPGALTMVIS-ERSETALHIATRVKRASFVEKLVERL 157

Query: 64  TKNDLEATNIYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNH 123
            +++L + N YGNTALCIAA SGAV IAK +V K+  L LIRGSGNATPVLIAARYKH  
Sbjct: 158 DEHELASKNKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKD 217

Query: 124 MVSYFLQMKWIIEEMEINDQMELLLSAIATDHY 156
           MVSY L  +  +  +   +QMELLL AI+ D+Y
Sbjct: 218 MVSYLLS-QTPVYGLAREEQMELLLGAISADYY 248

[Close]

BLAST of CmoCh13G007860 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 88/201 (43.78%), Postives = 127/201 (63.18%), Query Frame = 1


Query: 9   HRRCKGDWKAAEDIEK-EHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQKLTKNDL 68
           H   KGDW+ AE I K +    +S  I +D  ETALHIA       FVEKL+  +T +D+
Sbjct: 118 HAALKGDWEKAESILKADTSWSVSNYITRDN-ETALHIAAGAKHVEFVEKLIDTMTLDDM 177

Query: 69  EATNIYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYF 128
              N +GNTALC AATSG V IA+ MV+K+ +L LIRG GNATP+ +A  Y+   M SY 
Sbjct: 178 VIINTHGNTALCFAATSGVVRIAELMVKKNKDLPLIRGFGNATPLFMAISYQRKQMASYL 237

Query: 129 LQMKWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDV--NDDTPLHIMAR 188
             +    +++   DQ+ELL++ I +D YDI+L IL+   KLA+ RD   N++T LH++AR
Sbjct: 238 FSVT-DRKQLTSQDQIELLIATIHSDFYDISLEILERNPKLAIMRDTKNNNETALHVLAR 297

Query: 189 KTNAIGTNNDPTKWQSSISRY 207
           K +AI + ++ + W+  I+ +
Sbjct: 298 KPSAISSKSEISIWKKPINSW 316

[Close]

BLAST of CmoCh13G007860 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 60/143 (41.96%), Postives = 78/143 (54.55%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQKLTKNDLEATNI 72
           KGDWKAA  I  E K I+ + I   + ET LHIA       FV  L+  L  NDL   N+
Sbjct: 97  KGDWKAANGIIIEQKYIIYQKITS-KSETVLHIAVAAKHEGFVRNLLGSLESNDLALRNV 156

Query: 73  YGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQMKW 132
            GNTALC AA SG V+IAK ++ K+ +L +IRG G  TP+ +AA + H  MV Y L    
Sbjct: 157 DGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEMVKY-LYKNT 216

Query: 133 IIEEMEINDQMELLLSAIATDHY 156
              E    + + L  + I+ D Y
Sbjct: 217 RFREFNDEEFVNLFHAVISADIY 237

[Close]

BLAST of CmoCh13G007860 vs. TAIR10
Match: AT5G60070.1 (AT5G60070.1 ankyrin repeat family protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 45/179 (25.14%), Postives = 77/179 (43.02%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRK-----ETALHIATRFNQAAFVEKLVQKLTKNDL 72
           +GD+ A ++I   H     E+ +  RK     ETAL++A  +  A  V +L++     D 
Sbjct: 42  RGDFSAVKEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAELIKYYDLEDA 101

Query: 73  EATNIYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYF 132
           E     G     IAA  G +D+ + ++ +H  L +     N T +  AA   H  +V Y 
Sbjct: 102 ETKARNGFDPFHIAAKQGELDVLRVLMEEHPELSMTVDLSNTTALHTAAAQGHVEVVEYL 161

Query: 133 LQMKW-IIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMAR 186
           L+     +  +  ++    L SA    H ++   I+  +   A   D    TPLH+  +
Sbjct: 162 LEAAGSSLAAIAKSNGKTALHSAARNGHAEVVKAIVAVEPDTATRTDKKGQTPLHMAVK 220

[Close]

BLAST of CmoCh13G007860 vs. TAIR10
Match: AT5G04680.1 (AT5G04680.1 Ankyrin repeat family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 47/181 (25.97%), Postives = 86/181 (47.51%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQKLTKNDL---EA 72
           +G  +  +D   +H   + E IN    ET L  A    +   V++L+ ++T   +    +
Sbjct: 77  QGRVEVVKDFLNDHPDAVDEWINL--YETPLLKACACGKPEIVKELLWRMTPEQMLPKMS 136

Query: 73  TNIYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ 132
            N+  +TAL + A SG ++IA+ +V K+  L+ I G     PV++A       M  Y L 
Sbjct: 137 QNVSYHTALTVVAVSGNMEIAEALVAKNPKLLEIPGINGQIPVVVAVENTQMEMARY-LY 196

Query: 133 MKWIIEEMEINDQME---LLLSAIATDHYDIALLILKWKQKLALERDVN-DDTPLHIMAR 187
            +  ++ +   D      L L+AI     DIAL +    ++LA+ + +  +  P+ ++A 
Sbjct: 197 TRTPVQVLLAEDGYHGTLLFLNAIFYRMLDIALDLFNMSRRLAVTKHLQIESIPIIVLAS 254

[Close]

BLAST of CmoCh13G007860 vs. NCBI nr
Match: gi|778664857|ref|XP_011648419.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75
Identity = 149/197 (75.63%), Postives = 176/197 (89.34%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQ-KLTKNDLEATN 72
           +GDWKAAE+IEK+ KGILSEVI+KDRKETALHIATRFN+AAFVEKL++ KLT+ DLEA N
Sbjct: 83  RGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKN 142

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNTALCIAATSGAVDIA+ M RKHN+LVL RGS NATPVLIAARYKH+HMVS+ L+ M
Sbjct: 143 IYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSM 202

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTN-A 192
             I+++MEI++QMELLLSAIA+DHYDIA LI++W + LAL RD ND TPLHIMARK+N  
Sbjct: 203 NKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNGT 262

Query: 193 IGTNNDPTKWQSSISRY 207
           IGT N+PTKWQSSI+++
Sbjct: 263 IGTKNNPTKWQSSINKF 279

[Close]

BLAST of CmoCh13G007860 vs. NCBI nr
Match: gi|659067708|ref|XP_008440886.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75
Identity = 149/196 (76.02%), Postives = 175/196 (89.29%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQ-KLTKNDLEATN 72
           +GDWKAAE++EK++KGILS VI+KDRKETALHIATRFN+AAFVEKL++ KLT  DLEA N
Sbjct: 99  RGDWKAAEEMEKKNKGILSNVISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAKN 158

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNTALCIAATSGAVDIAK MVRKHN+LVL RGS NATPVLIAARYKH+HMVS+ L+ M
Sbjct: 159 IYGNTALCIAATSGAVDIAKLMVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKAM 218

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTN-A 192
             I+++MEI++QMELLLSAIA+DHYDIA LI+ W + LAL RD NDDTPLHIMARK+N  
Sbjct: 219 DLIVQKMEISEQMELLLSAIASDHYDIAFLIINWNKSLALIRDSNDDTPLHIMARKSNGT 278

Query: 193 IGTNNDPTKWQSSISR 206
           IGT ++PTKWQSSI++
Sbjct: 279 IGTKHNPTKWQSSINK 294

[Close]

BLAST of CmoCh13G007860 vs. NCBI nr
Match: gi|700209406|gb|KGN64502.1| (hypothetical protein Csa_1G062280 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 5.5e-75
Identity = 149/196 (76.02%), Postives = 175/196 (89.29%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQ-KLTKNDLEATN 72
           +GDWKAAE+IEK+ KGILSEVI+KDRKETALHIATRFN+AAFVEKL++ KLT+ DLEA N
Sbjct: 83  RGDWKAAEEIEKKSKGILSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAKN 142

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNTALCIAATSGAVDIA+ M RKHN+LVL RGS NATPVLIAARYKH+HMVS+ L+ M
Sbjct: 143 IYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKSM 202

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTN-A 192
             I+++MEI++QMELLLSAIA+DHYDIA LI++W + LAL RD ND TPLHIMARK+N  
Sbjct: 203 NKIVQKMEISEQMELLLSAIASDHYDIAFLIIEWNKSLALIRDSNDYTPLHIMARKSNGT 262

Query: 193 IGTNNDPTKWQSSISR 206
           IGT N+PTKWQSSI++
Sbjct: 263 IGTKNNPTKWQSSINK 278

[Close]

BLAST of CmoCh13G007860 vs. NCBI nr
Match: gi|778664854|ref|XP_011648417.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58
Identity = 127/196 (64.80%), Postives = 153/196 (78.06%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGI-LSEVINKDRKETALHIATRFNQAAFVEKLVQKLTKNDLEATN 72
           KGDWKAAE + +EH+ I L +VI+KDRKETALHIATRFN  AFV+KL+ +LT+NDLEA N
Sbjct: 79  KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAKN 138

Query: 73  IYGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQ-M 132
           IYGNT LCIAA +GA DIAK MV +H  LVL RGSGNA P+LIAARYK  HMVSY L+ M
Sbjct: 139 IYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKAM 198

Query: 133 KWIIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTN-A 192
              I+++   D+ E+L S I+++ YDIALLILK    LALERD ND+TPLHIMA+K+N  
Sbjct: 199 NSHIKKLNDTDKKEILFSVISSNDYDIALLILKENDHLALERDDNDNTPLHIMAKKSNGT 258

Query: 193 IGTNNDPTKWQSSISR 206
           IGT N  T WQSSI++
Sbjct: 259 IGTKNKLTDWQSSINK 274

[Close]

BLAST of CmoCh13G007860 vs. NCBI nr
Match: gi|659067701|ref|XP_008440848.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58
Identity = 121/195 (62.05%), Postives = 150/195 (76.92%), Query Frame = 1


Query: 13  KGDWKAAEDIEKEHKGILSEVINKDRKETALHIATRFNQAAFVEKLVQKLTKNDLEATNI 72
           KGDWK+A+ +E  H G L+ VI+ +R ETALHIATR  +A FVEKLV++L ++DL + N 
Sbjct: 7   KGDWKSAKQMEMMHPGALTMVIS-ERSETALHIATRVKRAVFVEKLVERLDEHDLASKNK 66

Query: 73  YGNTALCIAATSGAVDIAKFMVRKHNNLVLIRGSGNATPVLIAARYKHNHMVSYFLQMKW 132
           YGNTALCIAA SGAVDIAK +V K+  L LIRGSGNATPVLIAARYKH  MVSY L  K 
Sbjct: 67  YGNTALCIAAASGAVDIAKLLVLKYKALTLIRGSGNATPVLIAARYKHKDMVSYLLS-KT 126

Query: 133 IIEEMEINDQMELLLSAIATDHYDIALLILKWKQKLALERDVNDDTPLHIMARKTNAIGT 192
            +  +   +QMELLL AI+ D+YDIALLIL+W   L L+RD N++TPLHIMARK+ AIG 
Sbjct: 127 PVYGLASQEQMELLLGAISADYYDIALLILEWNMSLTLQRDFNNETPLHIMARKSGAIGK 186

Query: 193 NNDPTKWQSSISRYI 208
            N PTKW+S I++++
Sbjct: 187 KNKPTKWESCINKWL 199

The following BLAST results are available for this feature:

BLAST of CmoCh13G007860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ANK2_MOUSE	1.4e-06	32.45	Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2	[more]
ANK2_HUMAN	1.4e-06	32.45	Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4	[more]

BLAST of CmoCh13G007860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUS0_CUCSA	3.8e-75	76.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1	[more]
A0A0A0LX18_CUCSA	8.5e-59	64.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1	[more]
E5GC67_CUCME	7.5e-55	76.16	Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LUR7_CUCSA	1.0e-35	56.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1	[more]
A0A0A0LU19_CUCSA	1.5e-34	43.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1	[more]

BLAST of CmoCh13G007860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35830.1	1.1e-22	41.96	Ankyrin repeat family protein	[more]
AT5G60070.1	1.2e-08	25.14	ankyrin repeat family protein	[more]
AT5G04680.1	1.2e-06	25.97	Ankyrin repeat family protein	[more]

BLAST of CmoCh13G007860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664857\|ref\|XP_011648419.1\|	2.5e-75	75.63	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]	[more]
gi\|659067708\|ref\|XP_008440886.1\|	2.5e-75	76.02	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]	[more]
gi\|700209406\|gb\|KGN64502.1\|	5.5e-75	76.02	hypothetical protein Csa_1G062280 [Cucumis sativus]	[more]
gi\|778664854\|ref\|XP_011648417.1\|	1.2e-58	64.80	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus]	[more]
gi\|659067701\|ref\|XP_008440848.1\|	1.2e-58	62.05	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G007860.1	CmoCh13G007860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 107..136 score: 110.0coord: 38..69 score: 13.0coord: 73..102 score:
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 36..188 score: 4.1
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 36..96 score: 1.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 38..185 score: 16
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 36..185 score: 2.49
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 13..186 score: 7.9
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 13..186 score: 7.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G007860	CSPI01G10360	Wild cucumber (PI 183967)	cmocpiB205
CmoCh13G007860	CsaV3_1G010570	Cucumber (Chinese Long) v3	cmocucB0235
CmoCh13G007860	Cla97C03G055710	Watermelon (97103) v2	cmowmbB212

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G007860	Bottle gourd (USVL1VR-Ls)	cmolsiB189
CmoCh13G007860	Bottle gourd (USVL1VR-Ls)	cmolsiB197
CmoCh13G007860	Bottle gourd (USVL1VR-Ls)	cmolsiB200
CmoCh13G007860	Cucumber (Gy14) v2	cgybcmoB068
CmoCh13G007860	Cucumber (Gy14) v2	cgybcmoB709
CmoCh13G007860	Melon (DHL92) v3.6.1	cmomedB201
CmoCh13G007860	Melon (DHL92) v3.6.1	cmomedB217
CmoCh13G007860	Silver-seed gourd	carcmoB0672
CmoCh13G007860	Silver-seed gourd	carcmoB0882
CmoCh13G007860	Silver-seed gourd	carcmoB1244
CmoCh13G007860	Silver-seed gourd	carcmoB1349
CmoCh13G007860	Cucumber (Chinese Long) v3	cmocucB0254
CmoCh13G007860	Watermelon (97103) v2	cmowmbB196
CmoCh13G007860	Wax gourd	cmowgoB0262
CmoCh13G007860	Cucurbita moschata (Rifu)	cmocmoB170
CmoCh13G007860	Cucurbita moschata (Rifu)	cmocmoB182
CmoCh13G007860	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh13G007860	Cucumber (Gy14) v1	cgycmoB0033
CmoCh13G007860	Cucumber (Gy14) v1	cgycmoB0157
CmoCh13G007860	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G007860	Cucurbita maxima (Rimu)	cmacmoB393
CmoCh13G007860	Cucurbita maxima (Rimu)	cmacmoB637
CmoCh13G007860	Cucurbita maxima (Rimu)	cmacmoB847
CmoCh13G007860	Wild cucumber (PI 183967)	cmocpiB218
CmoCh13G007860	Cucumber (Chinese Long) v2	cmocuB203
CmoCh13G007860	Cucumber (Chinese Long) v2	cmocuB215
CmoCh13G007860	Melon (DHL92) v3.5.1	cmomeB195
CmoCh13G007860	Melon (DHL92) v3.5.1	cmomeB179
CmoCh13G007860	Watermelon (Charleston Gray)	cmowcgB176
CmoCh13G007860	Watermelon (Charleston Gray)	cmowcgB187
CmoCh13G007860	Watermelon (97103) v1	cmowmB176
CmoCh13G007860	Watermelon (97103) v1	cmowmB188
CmoCh13G007860	Cucurbita pepo (Zucchini)	cmocpeB188
CmoCh13G007860	Cucurbita pepo (Zucchini)	cmocpeB182
CmoCh13G007860	Cucurbita pepo (Zucchini)	cmocpeB201