CmoCh13G007480 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G007480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CRIB domain-containing protein RIC10
Location	Cmo_Chr13 : 7332967 .. 7334766 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAACAAATTGAAAGGGATCTACAAAAGTTTCAAGTACATTTCCCAAATCTTTGGTATTGTTTCTGTTTCTGTTTCTTCTCTCTTTTACACAATTCCCCTCTTAACTTTTGATTTGGGTTTTGATTATTTGGGACTGAATTTTGGGGTTTCAGTGGTGAAAGAACGAGAGATGGAGATTGGGTATCCTACGGATGTGAAGCATGTGGCACATATTGGATGGGATGGCCATTCTGGAACAGCGCCCAGTTGGGTACGTTATTATCATCATCTGATCTCAATATTTTCACTTCTTTGCACAATTTAGCTATCTGGGTCTCTTAAATTCTCCCTTGTTCTGGCAGATGAATGAATTCAAAACAGCACCACAGCATTTATCAGCTGCGTCGTTTGGGGATATTAGTGACAGAATAGATTCTAGTTCTTCTGCTGTTACAGCTCCTACAACATGGTCTTCTCTTGGTACTTTCTTGCCACCCTCCATTGTAGCTTCTCCTTTTCATTTTTGGATCACTTCTTTTTTATAGTAAAGAAATTGCTGTAGAAATGGTACTGAGAATATGTTGGATTGGAAGGAAGGTATTTTGTGTTCGTGGACAAGTGAAAACAGGGGCTTTTCACGGGTTAACCTATGAGATGAACAGATTTTGAAGATTCTTTACCCTATTTGAGAGATTTTGGCTTTTATGTCACGAGATCATCTCTCCTCTGTCTGGGGTAATCCAAAAATGTGATATTAGATCCCATATCGATGGGAGAGGGGAACGAAGCATTTGTTATAAGGGTGTGGAAAACTCTCCCTAGCAAATGTGTTTTAAAACCGTGAGGCTGACGATGATACGTAATGAGCCAAAGCAGACAATGTCTACTAGTGATGGGCTTGAGCCGTTACAAATAGTATCAGAGACAAACACCGAGCGGTGTGTCAATGAGGACGTTGGGGGTCATTAAGGAGAGTGAATTGTGAGATCTCACATCGGTTGGAGAGTGGAACGAAACATTCCTTAAAAGAGTGTGGAAACTTCTCTCTAGTATATGCGTTTTAAAACCGTGAGGCTGATGGCAATACGTAACGAGCCAAAGTGGACAATATTTGCTACCTAGCGGTGGGCTTAGGCGGTTACAATCAATCTTTTCCATCTTTTAATGGTTGAATCTCCCTAACCCATGTTGATAAGCCAATCCACTCCCTAATTTCGTTCGGTTCATCACCAAATTGCTGTCTAAACATGAAGTTACTGGCCTACATGAGATTTACTATTCTATTTCACTTTGTACATTTGACTGTCTATATTTGTTGTCAGAGTTTCATCCTAGAGGTCGCTGTCGTAGTTCTTGGATCTTTGTTGACACTTGAACTAAGTGCTAAATTTGGATAGTCTGTCATCCCAGTTCTGACCAGCCTTTGTGATACTCAAGACATTTTCTTCTTTTTTGGGGTCTCCTTGCTCGACGTTGATAGCCAGTTCATAATTTTCTGTACAGAATTGATGGAATTTGCACATGGCCTGTGATTGTTTGGTTGCTGTGGTGTGTCCATCAAATGAATGCCGAATCATTGCTTATCAAAGATTTTTATTTTCTTTTGTGTACAGATTTTGATCAAGCAATGCTACGCCAACAATCATCAGACTTGTTTGGTGAACTTCCACGCACAGAAATTCCCAACATTCCCACAAAACCAAAGAAAAAAACCAGAAACTTCTCTCCAAAATCTTCTTCAAAATCATCTCGAGCATCAAAGACAAAGCCATCATCCTTCGGCGAGATCAAGATGGTACCCAATTTGCAAGTATAG

mRNA sequence

ATGTCAAACAAATTGAAAGGGATCTACAAAAGTTTCAAGTACATTTCCCAAATCTTTGTGGTGAAAGAACGAGAGATGGAGATTGGGTATCCTACGGATGTGAAGCATGTGGCACATATTGGATGGGATGGCCATTCTGGAACAGCGCCCAGTTGGATGAATGAATTCAAAACAGCACCACAGCATTTATCAGCTGCGTCGTTTGGGGATATTAGTGACAGAATAGATTCTAGTTCTTCTGCTGTTACAGCTCCTACAACATGGTCTTCTCTTGATTTTGATCAAGCAATGCTACGCCAACAATCATCAGACTTGTTTGGTGAACTTCCACGCACAGAAATTCCCAACATTCCCACAAAACCAAAGAAAAAAACCAGAAACTTCTCTCCAAAATCTTCTTCAAAATCATCTCGAGCATCAAAGACAAAGCCATCATCCTTCGGCGAGATCAAGATGGTACCCAATTTGCAAGTATAG

Coding sequence (CDS)

ATGTCAAACAAATTGAAAGGGATCTACAAAAGTTTCAAGTACATTTCCCAAATCTTTGTGGTGAAAGAACGAGAGATGGAGATTGGGTATCCTACGGATGTGAAGCATGTGGCACATATTGGATGGGATGGCCATTCTGGAACAGCGCCCAGTTGGATGAATGAATTCAAAACAGCACCACAGCATTTATCAGCTGCGTCGTTTGGGGATATTAGTGACAGAATAGATTCTAGTTCTTCTGCTGTTACAGCTCCTACAACATGGTCTTCTCTTGATTTTGATCAAGCAATGCTACGCCAACAATCATCAGACTTGTTTGGTGAACTTCCACGCACAGAAATTCCCAACATTCCCACAAAACCAAAGAAAAAAACCAGAAACTTCTCTCCAAAATCTTCTTCAAAATCATCTCGAGCATCAAAGACAAAGCCATCATCCTTCGGCGAGATCAAGATGGTACCCAATTTGCAAGTATAG

Homology

[Close]

BLAST of CmoCh13G007480 vs. Swiss-Prot
Match: RIC10_ARATH (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana GN=RIC10 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVV-KER-EMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKT 60
           MS K+KGIYK FK ISQIF V KER E+EIG+PTDVKHVAHIGW+G SG+AP WM+EFK 
Sbjct: 1   MSMKMKGIYKGFKCISQIFAVEKERDEIEIGFPTDVKHVAHIGWEGSSGSAPGWMSEFKV 60

Query: 61  APQHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIP 120
             + LS            ++  + +  T+ SS DFDQ   ++  SD   ++P     N+P
Sbjct: 61  GAELLSPR-----PSSFSNARPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLP 120

Query: 121 TKPKKKT----RNFSPKSSSKSSRASKTKPSSF 148
              KKK+    ++ S  SS KSSR+S    SS+
Sbjct: 121 KNNKKKSSRRKKSSSSSSSPKSSRSSVLSKSSY 148

[Close]

BLAST of CmoCh13G007480 vs. Swiss-Prot
Match: RIC11_ARATH (CRIB domain-containing protein RIC11 OS=Arabidopsis thaliana GN=RIC11 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-16
Identity = 65/146 (44.52%), Postives = 84/146 (57.53%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYKSFK I  +FV KER++EIG+PT+VKHVAHIGW G SG+ P WM++FK   
Sbjct: 1   MAMKMKGIYKSFKSI--MFVGKERDLEIGHPTEVKHVAHIGW-GSSGSDPGWMSDFKAGA 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
           + LS  +      R   S       TT  S +FDQ  L    SD   ++P   IP   +K
Sbjct: 61  EFLSPRTSSFSHTRHSDSFF-----TTSDSTEFDQDQL--NISDRIRDVP--PIPVGLSK 120

Query: 121 PKKKTRNFSPKSSSKSSRASKTKPSS 147
              K++N   K SS SS  S+  P S
Sbjct: 121 IHTKSKNRRKKPSSTSSPRSRPSPKS 134

[Close]

BLAST of CmoCh13G007480 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16
Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 1


Query: 2   SNKLKGIYKSFKYISQIFVV---KEREMEIGYPTDVKHVAHIGWDGHS--GTAPSWMNEF 61
           S K+K + K  +YISQ+F +   KE EM+IG PTDVKHVAHIGWDG S   TAPSWMN+F
Sbjct: 7   STKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDF 66

Query: 62  KTAPQHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPN 121
           K++P   S    G+                       D + ++ QS   FG   R    +
Sbjct: 67  KSSPVMESIQGLGE-----------------------DDSSVKCQSE--FGGRTR----D 124

Query: 122 IPTKPKKKTRNFSPKSSSKSSRASKTK 144
           +P  PK   ++ S K S    R+ KTK
Sbjct: 127 LPKLPKSTRKSSSEKGSPTKERSDKTK 124

[Close]

BLAST of CmoCh13G007480 vs. Swiss-Prot
Match: RIC9_ARATH (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-14
Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 1


Query: 1   MSNKLKGIY-KSFKYISQIF-VVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKT 60
           M+ + KG+Y KSFK  S IF V +E EMEIGYPTDV+HV+HIGWD  S +APSW++EFKT
Sbjct: 1   MATRFKGLYNKSFKCFSDIFDVEEEEEMEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKT 60

Query: 61  APQHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRT-EIPNI 120
                              S++ +   ++W   D   AM      + FGE+  + E+   
Sbjct: 61  -------------------SNNVLEPNSSWPFQDLKSAM------EAFGEVESSKEMERE 110

Query: 121 PTKPKKKTRNFSPKSSSKSS 138
            TK     +N   K SSK+S
Sbjct: 121 STK-----QNLKKKLSSKAS 110

[Close]

BLAST of CmoCh13G007480 vs. Swiss-Prot
Match: RIC5_ARATH (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-14
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


Query: 1  MSNKLKGIYKSFKYISQIFV-VKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTA 60
          M++ +KG+ K  +YI++IF   KE EM+IG PTDVKHVAHIGW+G S T PSWM++FK  
Sbjct: 1  MTSPMKGLLKGLRYIARIFEDEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKPT 60

Query: 61 PQ 62
           Q
Sbjct: 61 DQ 62

[Close]

BLAST of CmoCh13G007480 vs. TrEMBL
Match: A0A0A0LX49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064680 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-75
Identity = 148/159 (93.08%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDG SGTAPSWMNEFKTAP
Sbjct: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
           +H SAASFGDISDR DSSS+AVTAPTTWSSLDFDQAMLRQQ+SD FGELPRTEIPN+PTK
Sbjct: 61  EHFSAASFGDISDRRDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIPNLPTK 120

Query: 121 PKKKTRNFSPK-SSSKSSRASKTKPSSFGEIKMVPNLQV 159
           PKKKTRNFSPK SSSKSSR SKTKP SFGEIKMVPNLQV
Sbjct: 121 PKKKTRNFSPKSSSSKSSRVSKTKPPSFGEIKMVPNLQV 159

[Close]

BLAST of CmoCh13G007480 vs. TrEMBL
Match: B9H1G0_POPTR (ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 10 OS=Populus trichocarpa GN=POPTR_0004s02000g PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 94/163 (57.67%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYK FKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSG+APSWMNEFKT P
Sbjct: 1   MATKIKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
              S  +  +  D    SSS + +P  WSS DFD ++  Q   ++F ++P +++PN+P K
Sbjct: 61  D-FSTTTVANPRD----SSSVILSP--WSSQDFDHSLGHQTMPNVFNDIPPSDLPNVPKK 120

Query: 121 P---KKKTRNFSPKSSSKSSRAS-KTKPSSFG-EIKMVPNLQV 159
           P   KKKT + SPKSSS +SR+S KTK  +   E++  P +QV
Sbjct: 121 PKIRKKKTSSSSPKSSSSTSRSSRKTKQKAMQYELESTPKVQV 156

[Close]

BLAST of CmoCh13G007480 vs. TrEMBL
Match: A0A061GGE1_THECC (ROP-interactive CRIB motif-containing protein 10 OS=Theobroma cacao GN=TCM_030172 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.0e-37
Identity = 90/144 (62.50%), Postives = 106/144 (73.61%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYK FK+ISQIFVVKEREMEIGYPTDVKHVAHIGWDG SGTAPSWMNEFKT P
Sbjct: 1   MATKIKGIYKGFKFISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTGP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
              +A S G      +S  S  TA +TWSS DF+Q++  + ++ +  +L   ++PNIP K
Sbjct: 61  D-FTATSIG------NSRGSNPTALSTWSSQDFEQSLGCEPATQMIRDLSSADLPNIPKK 120

Query: 121 PK-KKTRNFSPKSSSKSSRASKTK 144
            K KK    SPKSSSKSSR SKTK
Sbjct: 121 QKRKKKTTSSPKSSSKSSRTSKTK 137

[Close]

BLAST of CmoCh13G007480 vs. TrEMBL
Match: A0A067GJB3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027719mg PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 92/148 (62.16%), Postives = 109/148 (73.65%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDG SG+APSWMNEFK AP
Sbjct: 72  MATKMKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGQSGSAPSWMNEFKAAP 131

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
              S+     I + +DSS         WSS DF+Q M +Q +S+LF ++  T++P IP K
Sbjct: 132 DFTSS-----IGNPVDSS--------PWSSQDFEQQMGQQPASELFKDILPTDLPKIPKK 191

Query: 121 P--KKKTRNFSPK---SSSKSSRASKTK 144
              KKK+ N SPK   SSS+SSRA+KTK
Sbjct: 192 QKRKKKSSNNSPKSSSSSSRSSRAAKTK 206

[Close]

BLAST of CmoCh13G007480 vs. TrEMBL
Match: A0A059CFE7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01296 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-36
Identity = 92/149 (61.74%), Postives = 110/149 (73.83%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYK FKYISQIFVVKER+MEIGYPTDVKHVAHIGWDG SG+ PSWMNEFK AP
Sbjct: 58  MATKMKGIYKGFKYISQIFVVKERDMEIGYPTDVKHVAHIGWDGPSGSGPSWMNEFKNAP 117

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
               + S G I D  DSSS    A +TWSS DF+Q + +Q +S++F E   T++PNIP K
Sbjct: 118 DF--STSLGTIGDPGDSSS---VARSTWSSQDFEQILGQQSTSEMFKENLPTDLPNIPKK 177

Query: 121 PKKK--TRNFSPK--SSSKSSRASKTKPS 146
            K+K      SPK  SSS+SSRA+K+K S
Sbjct: 178 QKRKKSKSTSSPKSSSSSRSSRAAKSKAS 201

[Close]

BLAST of CmoCh13G007480 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10)

HSP 1 Score: 110.9 bits (276), Expect = 7.1e-25
Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVV-KER-EMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKT 60
           MS K+KGIYK FK ISQIF V KER E+EIG+PTDVKHVAHIGW+G SG+AP WM+EFK 
Sbjct: 1   MSMKMKGIYKGFKCISQIFAVEKERDEIEIGFPTDVKHVAHIGWEGSSGSAPGWMSEFKV 60

Query: 61  APQHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIP 120
             + LS            ++  + +  T+ SS DFDQ   ++  SD   ++P     N+P
Sbjct: 61  GAELLSPR-----PSSFSNARPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLP 120

Query: 121 TKPKKKT----RNFSPKSSSKSSRASKTKPSSF 148
              KKK+    ++ S  SS KSSR+S    SS+
Sbjct: 121 KNNKKKSSRRKKSSSSSSSPKSSRSSVLSKSSY 148

[Close]

BLAST of CmoCh13G007480 vs. TAIR10
Match: AT4G21745.1 (AT4G21745.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 65/146 (44.52%), Postives = 84/146 (57.53%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYKSFK I  +FV KER++EIG+PT+VKHVAHIGW G SG+ P WM++FK   
Sbjct: 1   MAMKMKGIYKSFKSI--MFVGKERDLEIGHPTEVKHVAHIGW-GSSGSDPGWMSDFKAGA 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
           + LS  +      R   S       TT  S +FDQ  L    SD   ++P   IP   +K
Sbjct: 61  EFLSPRTSSFSHTRHSDSFF-----TTSDSTEFDQDQL--NISDRIRDVP--PIPVGLSK 120

Query: 121 PKKKTRNFSPKSSSKSSRASKTKPSS 147
              K++N   K SS SS  S+  P S
Sbjct: 121 IHTKSKNRRKKPSSTSSPRSRPSPKS 134

[Close]

BLAST of CmoCh13G007480 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17
Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 1


Query: 2   SNKLKGIYKSFKYISQIFVV---KEREMEIGYPTDVKHVAHIGWDGHS--GTAPSWMNEF 61
           S K+K + K  +YISQ+F +   KE EM+IG PTDVKHVAHIGWDG S   TAPSWMN+F
Sbjct: 7   STKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDF 66

Query: 62  KTAPQHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPN 121
           K++P   S    G+                       D + ++ QS   FG   R    +
Sbjct: 67  KSSPVMESIQGLGE-----------------------DDSSVKCQSE--FGGRTR----D 124

Query: 122 IPTKPKKKTRNFSPKSSSKSSRASKTK 144
           +P  PK   ++ S K S    R+ KTK
Sbjct: 127 LPKLPKSTRKSSSEKGSPTKERSDKTK 124

[Close]

BLAST of CmoCh13G007480 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15
Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 1


Query: 1   MSNKLKGIY-KSFKYISQIF-VVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKT 60
           M+ + KG+Y KSFK  S IF V +E EMEIGYPTDV+HV+HIGWD  S +APSW++EFKT
Sbjct: 1   MATRFKGLYNKSFKCFSDIFDVEEEEEMEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKT 60

Query: 61  APQHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRT-EIPNI 120
                              S++ +   ++W   D   AM      + FGE+  + E+   
Sbjct: 61  -------------------SNNVLEPNSSWPFQDLKSAM------EAFGEVESSKEMERE 110

Query: 121 PTKPKKKTRNFSPKSSSKSS 138
            TK     +N   K SSK+S
Sbjct: 121 STK-----QNLKKKLSSKAS 110

[Close]

BLAST of CmoCh13G007480 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


Query: 1  MSNKLKGIYKSFKYISQIFV-VKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTA 60
          M++ +KG+ K  +YI++IF   KE EM+IG PTDVKHVAHIGW+G S T PSWM++FK  
Sbjct: 1  MTSPMKGLLKGLRYIARIFEDEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKPT 60

Query: 61 PQ 62
           Q
Sbjct: 61 DQ 62

[Close]

BLAST of CmoCh13G007480 vs. NCBI nr
Match: gi|449472647|ref|XP_004153657.1| (PREDICTED: CRIB domain-containing protein RIC10 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 4.1e-75
Identity = 148/159 (93.08%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDG SGTAPSWMNEFKTAP
Sbjct: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
           +H SAASFGDISDR DSSS+AVTAPTTWSSLDFDQAMLRQQ+SD FGELPRTEIPN+PTK
Sbjct: 61  EHFSAASFGDISDRRDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIPNLPTK 120

Query: 121 PKKKTRNFSPK-SSSKSSRASKTKPSSFGEIKMVPNLQV 159
           PKKKTRNFSPK SSSKSSR SKTKP SFGEIKMVPNLQV
Sbjct: 121 PKKKTRNFSPKSSSSKSSRVSKTKPPSFGEIKMVPNLQV 159

[Close]

BLAST of CmoCh13G007480 vs. NCBI nr
Match: gi|659067807|ref|XP_008441384.1| (PREDICTED: CRIB domain-containing protein RIC10-like [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74
Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           MSNKLKGIYKSFKYISQIFV+KEREMEIGYPTDVKHVAHIGWDG SGTAPSWMNEFKTAP
Sbjct: 1   MSNKLKGIYKSFKYISQIFVMKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
           +H SAASFGDISDR DSSS+AVTAPTTWSSLDFDQAMLRQQ+SD FGELPRTEIPN+P K
Sbjct: 61  EHFSAASFGDISDRRDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIPNLPIK 120

Query: 121 PKKKTRNFSPK-SSSKSSRASKTKPSSFGEIKMVPNLQV 159
           PKKKTRNFSPK SSSKSSR SKTKPSSFGEIKMVPNLQV
Sbjct: 121 PKKKTRNFSPKSSSSKSSRVSKTKPSSFGEIKMVPNLQV 159

[Close]

BLAST of CmoCh13G007480 vs. NCBI nr
Match: gi|1009108152|ref|XP_015883283.1| (PREDICTED: CRIB domain-containing protein RIC10 [Ziziphus jujuba])

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-42
Identity = 97/160 (60.62%), Postives = 123/160 (76.88%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           MS K+KGIYKSFKYISQIFVVKERE+EIGYPTDVKHVAHIGWDG SG+APSWMNEFKTAP
Sbjct: 1   MSTKMKGIYKSFKYISQIFVVKERELEIGYPTDVKHVAHIGWDGPSGSAPSWMNEFKTAP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
              SA S G+I +R DS+  A+   +TWSS DF+Q+M  Q +SD+F ++P  E+PN+P K
Sbjct: 61  D-FSATSLGNIGERRDSNPMAL---STWSSQDFEQSMGHQSTSDMFMDVPSNELPNVPKK 120

Query: 121 PKKK--TRNFSPKSSS---KSSRASKTKPSSFGEIKMVPN 156
            K+K    + SPKSSS   +SSR +K+K +++  ++  PN
Sbjct: 121 QKRKKSKSDSSPKSSSSLVRSSRTTKSKATTYNNLEAPPN 156

[Close]

BLAST of CmoCh13G007480 vs. NCBI nr
Match: gi|743885989|ref|XP_011037714.1| (PREDICTED: CRIB domain-containing protein RIC10-like [Populus euphratica])

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38
Identity = 95/163 (58.28%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYK FKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSG+APSWMNEFKT P
Sbjct: 1   MATKIKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
              S  +  +  D    SSS + +P  WSS DFD +M  Q   ++F ++P +++PN+P K
Sbjct: 61  D-FSTTTVANPRD----SSSVILSP--WSSQDFDHSMGSQTMPNVFNDIPPSDLPNVPKK 120

Query: 121 P---KKKTRNFSPKSSSKSSRAS-KTKPSSFG-EIKMVPNLQV 159
           P   KKKT + SPKSSS +SR+S KTK  +   E++  P +QV
Sbjct: 121 PKIRKKKTSSSSPKSSSSTSRSSRKTKQKAMQYELESTPKVQV 156

[Close]

BLAST of CmoCh13G007480 vs. NCBI nr
Match: gi|224078691|ref|XP_002305604.1| (ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 10 [Populus trichocarpa])

HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38
Identity = 94/163 (57.67%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGTAPSWMNEFKTAP 60
           M+ K+KGIYK FKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSG+APSWMNEFKT P
Sbjct: 1   MATKIKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPP 60

Query: 61  QHLSAASFGDISDRIDSSSSAVTAPTTWSSLDFDQAMLRQQSSDLFGELPRTEIPNIPTK 120
              S  +  +  D    SSS + +P  WSS DFD ++  Q   ++F ++P +++PN+P K
Sbjct: 61  D-FSTTTVANPRD----SSSVILSP--WSSQDFDHSLGHQTMPNVFNDIPPSDLPNVPKK 120

Query: 121 P---KKKTRNFSPKSSSKSSRAS-KTKPSSFG-EIKMVPNLQV 159
           P   KKKT + SPKSSS +SR+S KTK  +   E++  P +QV
Sbjct: 121 PKIRKKKTSSSSPKSSSSTSRSSRKTKQKAMQYELESTPKVQV 156

The following BLAST results are available for this feature:

BLAST of CmoCh13G007480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC10_ARATH	1.3e-23	47.06	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana GN=RIC10 PE=2 SV=1	[more]
RIC11_ARATH	2.0e-16	44.52	CRIB domain-containing protein RIC11 OS=Arabidopsis thaliana GN=RIC11 PE=2 SV=1	[more]
RIC7_ARATH	7.4e-16	39.46	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1	[more]
RIC9_ARATH	2.4e-14	40.00	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1	[more]
RIC5_ARATH	4.1e-14	58.06	CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1	[more]

BLAST of CmoCh13G007480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX49_CUCSA	2.9e-75	93.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064680 PE=4 SV=1	[more]
B9H1G0_POPTR	1.7e-38	57.67	ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 10 OS=Populus trichocarpa GN=POPTR...	[more]
A0A061GGE1_THECC	7.0e-37	62.50	ROP-interactive CRIB motif-containing protein 10 OS=Theobroma cacao GN=TCM_03017...	[more]
A0A067GJB3_CITSI	1.2e-36	62.16	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027719mg PE=4 SV=1	[more]
A0A059CFE7_EUCGR	2.0e-36	61.74	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01296 PE=4 SV=1	[more]

BLAST of CmoCh13G007480 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04900.1	7.1e-25	47.06	ROP-interactive CRIB motif-containing protein 10	[more]
AT4G21745.1	1.1e-17	44.52	PAK-box/P21-Rho-binding family protein	[more]
AT4G28556.1	4.2e-17	39.46	PAK-box/P21-Rho-binding family protein	[more]
AT1G61795.1	1.3e-15	40.00	PAK-box/P21-Rho-binding family protein	[more]
AT3G23380.1	2.3e-15	58.06	ROP-interactive CRIB motif-containing protein 5	[more]

BLAST of CmoCh13G007480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449472647\|ref\|XP_004153657.1\|	4.1e-75	93.08	PREDICTED: CRIB domain-containing protein RIC10 [Cucumis sativus]	[more]
gi\|659067807\|ref\|XP_008441384.1\|	1.2e-74	92.45	PREDICTED: CRIB domain-containing protein RIC10-like [Cucumis melo]	[more]
gi\|1009108152\|ref\|XP_015883283.1\|	3.5e-42	60.63	PREDICTED: CRIB domain-containing protein RIC10 [Ziziphus jujuba]	[more]
gi\|743885989\|ref\|XP_011037714.1\|	1.4e-38	58.28	PREDICTED: CRIB domain-containing protein RIC10-like [Populus euphratica]	[more]
gi\|224078691\|ref\|XP_002305604.1\|	2.4e-38	57.67	ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 10 [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G007480.1	CmoCh13G007480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 22..59 score: 6.2
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 27..59 score: 7.2
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 28..59 score: 1.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 28..41 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..143 score: 1.1
None	No IPR available	PANTHER	PTHR23177:SF27	SUBFAMILY NOT NAMED	coord: 1..143 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G007480	Cucsa.045370	Cucumber (Gy14) v1	cgycmoB0033
CmoCh13G007480	Cucsa.086040	Cucumber (Gy14) v1	cgycmoB0157
CmoCh13G007480	CmaCh13G007240	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G007480	CmaCh18G002410	Cucurbita maxima (Rimu)	cmacmoB393
CmoCh13G007480	CmaCh03G005250	Cucurbita maxima (Rimu)	cmacmoB637
CmoCh13G007480	CmaCh07G003000	Cucurbita maxima (Rimu)	cmacmoB847
CmoCh13G007480	Cla019401	Watermelon (97103) v1	cmowmB176
CmoCh13G007480	Csa1G064680	Cucumber (Chinese Long) v2	cmocuB203
CmoCh13G007480	Csa6G514880	Cucumber (Chinese Long) v2	cmocuB215
CmoCh13G007480	MELO3C002478	Melon (DHL92) v3.5.1	cmomeB179
CmoCh13G007480	MELO3C007376	Melon (DHL92) v3.5.1	cmomeB195
CmoCh13G007480	ClCG03G004940	Watermelon (Charleston Gray)	cmowcgB187
CmoCh13G007480	ClCG01G022130	Watermelon (Charleston Gray)	cmowcgB176
CmoCh13G007480	CSPI01G10920	Wild cucumber (PI 183967)	cmocpiB205
CmoCh13G007480	CSPI06G33710	Wild cucumber (PI 183967)	cmocpiB218
CmoCh13G007480	Lsi01G004100	Bottle gourd (USVL1VR-Ls)	cmolsiB189
CmoCh13G007480	Lsi02G006250	Bottle gourd (USVL1VR-Ls)	cmolsiB197
CmoCh13G007480	Cp4.1LG20g03860	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G007480	Cp4.1LG09g08780	Cucurbita pepo (Zucchini)	cmocpeB182
CmoCh13G007480	MELO3C002478.2	Melon (DHL92) v3.6.1	cmomedB201
CmoCh13G007480	MELO3C007376.2	Melon (DHL92) v3.6.1	cmomedB217
CmoCh13G007480	CsaV3_6G049190	Cucumber (Chinese Long) v3	cmocucB0254
CmoCh13G007480	CsaV3_1G011000	Cucumber (Chinese Long) v3	cmocucB0235
CmoCh13G007480	Cla97C01G021780	Watermelon (97103) v2	cmowmbB196
CmoCh13G007480	Cla97C03G056110	Watermelon (97103) v2	cmowmbB212
CmoCh13G007480	Bhi08G001453	Wax gourd	cmowgoB0251
CmoCh13G007480	CsGy1G010830	Cucumber (Gy14) v2	cgybcmoB068
CmoCh13G007480	Carg07531	Silver-seed gourd	carcmoB1349
CmoCh13G007480	Carg13711	Silver-seed gourd	carcmoB1244
CmoCh13G007480	Carg26538	Silver-seed gourd	carcmoB1078

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G007480	CmoCh18G002890	Cucurbita moschata (Rifu)	cmocmoB170
CmoCh13G007480	CmoCh03G005490	Cucurbita moschata (Rifu)	cmocmoB182

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G007480	Silver-seed gourd	carcmoB0882
CmoCh13G007480	Silver-seed gourd	carcmoB1181
CmoCh13G007480	Wax gourd	cmowgoB0240
CmoCh13G007480	Cucurbita moschata (Rifu)	cmocmoB177
CmoCh13G007480	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh13G007480	Cucumber (Gy14) v1	cgycmoB0405
CmoCh13G007480	Cucurbita maxima (Rimu)	cmacmoB499
CmoCh13G007480	Wild cucumber (PI 183967)	cmocpiB220
CmoCh13G007480	Cucumber (Chinese Long) v2	cmocuB218
CmoCh13G007480	Melon (DHL92) v3.5.1	cmomeB190
CmoCh13G007480	Watermelon (Charleston Gray)	cmowcgB181
CmoCh13G007480	Watermelon (97103) v1	cmowmB188
CmoCh13G007480	Cucurbita pepo (Zucchini)	cmocpeB188
CmoCh13G007480	Bottle gourd (USVL1VR-Ls)	cmolsiB188
CmoCh13G007480	Bottle gourd (USVL1VR-Ls)	cmolsiB200
CmoCh13G007480	Cucumber (Gy14) v2	cgybcmoB709