CmoCh13G003900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G003900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Lycopene beta-cyclase
Location	Cmo_Chr13 : 4933111 .. 4935852 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTCCGCCATTATAATACCCTGAAAAGCTTCCCAAAGCTTCCAATTCCATTTCAATGGCGATTTCCCATGCCCTTCTTTCACCATTCTCTCTTCCCGACATACCCTCTTCCCCAATTCACTCGCCATTCAGAACCCACTTCCAACCACACTGCACCCTCCGCAGATTCGGCAACTTTCTCGACCTTAAACCCGAGTCCAAACCCCAGCCCCTCAAGTTCGATCTTCCCCTGTTTCATCCCTACTCCGATCGCCCCCGCCGCTTCGACGTGGTGGTCGTTGGCGCCGGCCCCGCCGGCCTCCGCCTCGCTGAGCAGCTCTCCGCCTACGGAATCAAGGTCTGCTGCGTTGACCCTTCCCCGCTTTCTCCTTGGCCCAATAACTACGGCGTTTGGGTGGATGAGTTTCAGGCTCTGGGTTTCCAGGATTGCTTCCACAAGACTTGGCCCATGGCTTCCGTGTATTTAAATGACGAGAAAGTCAAGTTTCTGGATCGCCCCTACGCTCAGGTGCTTACCCTTCAACCCGATGATTTTAGCTTAATTTTGTCTCACTTATATTTTCGTATAAGCTCTCGACATTGTTTTGAGCTGGAGTTTCCTTCTCGTGACCATTTCCTAAATTGGCGGACCCCTTCCCAACAATCATTTTTTGAAATAAAGCACATTACAGAGTGGAGCCCTCGGACAGTCTCCACTAAATCAAGGTTCAGAGTCCTCGAACAAATTACACTCTTTATTGAGCCTCCCCTGAGGCCTATGGAATCCTCGAATAGCCTCCCTTTAATCGAGGCTCAATTCCTTTTTTGGAGTTCTCTATGGAGCCCTCGAACAGTCTCCCCTTAATTGAGGTTCGACTCCTTCTTTAGAGTCTCGAACAAAGTACACCCTTTGTTGAGCCTCCCCTGAAGCCTATGGAGCCCACGAATAGCCTCCCCTTAATCGAGGTTTGACTCCTTCGCTGGAGTCCTTGAACAAAAGGCCTATGGAGCCCTCGAACAGTCTCCCTCTAACCGAGGCTCGACTCCTCCTTTCGAGTCCTCGAGGCTCGACTACTTCTCTACTGTCCTTGAACAAAGTACACCCTTTGTTGAGCCGCTCTGGAGGCCTATAGAGTTCTCAAATAGCCTCTTCTTAATCAAGGATCAACTTCTTAGAGTCTTCGAGCAAAGTACACCCTTTCTTAAAGACTTGAGGATTCTATTGACATGGCTAAAAGGGCATGACTCAGATACCATATTAGGAATCACGACCCTCCACTATGGCATAATATTGTCTACTTTGAACCTAAGCTCTCGTGACTTTGCATTGAGCTTCCAAAATGCTTCCCACCCATGTAAATGGAATGATTACTCATTCCCTAAATTATCCTCCACAATATATACCCTTTTATTCATTGGTTTTGAACGCAGGTGAGCAGGAAGAAACTTAAGATGAAATTAATGGAGGAATGCGCAACAAAAGGAGTAAAGTTCCATAAGGCCAAAGTGTGGGAAATTAAGCATCAAGAATTCGAATCATCAGTGGCTTGCGACGATGGAACTGAAATCAAAGCAAATTTGGTGATCGACACAAGTGGGTTCGCAAGCAGATTCACAGAGTATTCAAATTCGAAGCCAAGAAACTGCGGCTTTCAAATCGCCCATGGAATTCTAGCAGAAGTCGAACAGCACCCATTCGATCTAAACAAGATGGTTCTAATGGATTGGAGAGACACCCATTTAGGGAACGAGCCATACCTGAGACAAGACAACAAAAAATCCCCAACATTCCTCTACGCAATGCCATTCGATTCCAATCTAATCTTCCTGGAAGAGACCTCCCTCGTCGGCCGCCCAGCGCTGCCGTACGCGGTGGTGAAGAGGAGAATGGCAGCCAGACTGCGGCACTTGGGGATAAAGGTGAAGAGAATCTTAGAAGAGGAGAAGTGCGTGATTCCGATGGGGGGTTCTCTACCGAAGATGCCTCAGGCAGTGGTGGCGGCAGGTGGGGTGGCAGGGATGGTGCATCCGGCAAGTGGGTACTCGGTGGTTTTGGGAATGGCAGCGGCGCCAGGGGTTGCGAGAAGGGCCGCGGAGGGGCTAGGCAGCGGCGGGAGGATGATCAGAGGCAGGGCGCTGCAGGGGAGGGTTTGGGAAGGGGTGTGGCCGGCGGAGAGGAGACGTGTGAGGGAGTTTTATTGCTTTGGGATGGAGACGTTGGTGCGGCTTGATTTGGAAGGGTTGAGGAGGTTTTTTGATGCGTTTTTTGATTTGGAAGGGTTTTATTGGGAGGGCTTCTTGTCTTCAAGGTTGTCTATTAGGGAGTTGGGTATGTTGGGATTGTTACTCTTTGGACATGCCTCTCCTATGTCTAAGCTTGATATTCTAACTAAATGCCCTCTTCCTCTTGCTAAAATGATGGCTAATCTTGCCCTCCAAGCTTTGTGATCAATGAATATGTCACCTTCTTTCATCAAATTGTTTTCGAGAACCTTTAGAATTAGTCTCCTCTGTGGATCCCGACCTAAAAACGAGAAGCTCTTGTGTGACTATTTTAGTCGCGGGTGCACAGGAGCGCGAAGGCGAAGGCGAAGGCGAAACAAAAATTGAACGCACTGATTTATCTTCCTTCATGTCGTAGTCTTAGCTTTTCGATGGGTCTTGCATTAGATACATACAACATTCTTTCTGCATTGGCTCTTATTCATTTTTATTTGGGATGTTCATTTGACTTGATGATCCGACTAATCTAGACTACCCA

mRNA sequence

AAATTTCCGCCATTATAATACCCTGAAAAGCTTCCCAAAGCTTCCAATTCCATTTCAATGGCGATTTCCCATGCCCTTCTTTCACCATTCTCTCTTCCCGACATACCCTCTTCCCCAATTCACTCGCCATTCAGAACCCACTTCCAACCACACTGCACCCTCCGCAGATTCGGCAACTTTCTCGACCTTAAACCCGAGTCCAAACCCCAGCCCCTCAAGTTCGATCTTCCCCTGTTTCATCCCTACTCCGATCGCCCCCGCCGCTTCGACGTGGTGGTCGTTGGCGCCGGCCCCGCCGGCCTCCGCCTCGCTGAGCAGCTCTCCGCCTACGGAATCAAGGTCTGCTGCGTTGACCCTTCCCCGCTTTCTCCTTGGCCCAATAACTACGGCGTTTGGGTGGATGAGTTTCAGGCTCTGGGTTTCCAGGATTGCTTCCACAAGACTTGGCCCATGGCTTCCGTGTATTTAAATGACGAGAAAGTCAAGTTTCTGGATCGCCCCTACGCTCAGGTGAGCAGGAAGAAACTTAAGATGAAATTAATGGAGGAATGCGCAACAAAAGGAGTAAAGTTCCATAAGGCCAAAGTGTGGGAAATTAAGCATCAAGAATTCGAATCATCAGTGGCTTGCGACGATGGAACTGAAATCAAAGCAAATTTGGTGATCGACACAAGTGGGTTCGCAAGCAGATTCACAGAGTATTCAAATTCGAAGCCAAGAAACTGCGGCTTTCAAATCGCCCATGGAATTCTAGCAGAAGTCGAACAGCACCCATTCGATCTAAACAAGATGGTTCTAATGGATTGGAGAGACACCCATTTAGGGAACGAGCCATACCTGAGACAAGACAACAAAAAATCCCCAACATTCCTCTACGCAATGCCATTCGATTCCAATCTAATCTTCCTGGAAGAGACCTCCCTCGTCGGCCGCCCAGCGCTGCCGTACGCGGTGGTGAAGAGGAGAATGGCAGCCAGACTGCGGCACTTGGGGATAAAGGTGAAGAGAATCTTAGAAGAGGAGAAGTGCGTGATTCCGATGGGGGGTTCTCTACCGAAGATGCCTCAGGCAGTGGTGGCGGCAGGTGGGGTGGCAGGGATGGTGCATCCGGCAAGTGGGTACTCGGTGGTTTTGGGAATGGCAGCGGCGCCAGGGGTTGCGAGAAGGGCCGCGGAGGGGCTAGGCAGCGGCGGGAGGATGATCAGAGGCAGGGCGCTGCAGGGGAGGGTTTGGGAAGGGGTGTGGCCGGCGGAGAGGAGACGTGTGAGGGAGTTTTATTGCTTTGGGATGGAGACGTTGGTGCGGCTTGATTTGGAAGGGTTGAGGAGGTTTTTTGATGCGTTTTTTGATTTGGAAGGGTTTTATTGGGAGGGCTTCTTGTCTTCAAGGTTGTCTATTAGGGAGTTGGGTATGTTGGGATTGTTACTCTTTGGACATGCCTCTCCTATGTCTAAGCTTGATATTCTAACTAAATGCCCTCTTCCTCTTGCTAAAATGATGGCTAATCTTGCCCTCCAAGCTTTGTGATCAATGAATATGTCACCTTCTTTCATCAAATTGTTTTCGAGAACCTTTAGAATTAGTCTCCTCTGTGGATCCCGACCTAAAAACGAGAAGCTCTTGTGTGACTATTTTAGTCGCGGGTGCACAGGAGCGCGAAGGCGAAGGCGAAGGCGAAACAAAAATTGAACGCACTGATTTATCTTCCTTCATGTCGTAGTCTTAGCTTTTCGATGGGTCTTGCATTAGATACATACAACATTCTTTCTGCATTGGCTCTTATTCATTTTTATTTGGGATGTTCATTTGACTTGATGATCCGACTAATCTAGACTACCCA

Coding sequence (CDS)

ATGGCGATTTCCCATGCCCTTCTTTCACCATTCTCTCTTCCCGACATACCCTCTTCCCCAATTCACTCGCCATTCAGAACCCACTTCCAACCACACTGCACCCTCCGCAGATTCGGCAACTTTCTCGACCTTAAACCCGAGTCCAAACCCCAGCCCCTCAAGTTCGATCTTCCCCTGTTTCATCCCTACTCCGATCGCCCCCGCCGCTTCGACGTGGTGGTCGTTGGCGCCGGCCCCGCCGGCCTCCGCCTCGCTGAGCAGCTCTCCGCCTACGGAATCAAGGTCTGCTGCGTTGACCCTTCCCCGCTTTCTCCTTGGCCCAATAACTACGGCGTTTGGGTGGATGAGTTTCAGGCTCTGGGTTTCCAGGATTGCTTCCACAAGACTTGGCCCATGGCTTCCGTGTATTTAAATGACGAGAAAGTCAAGTTTCTGGATCGCCCCTACGCTCAGGTGAGCAGGAAGAAACTTAAGATGAAATTAATGGAGGAATGCGCAACAAAAGGAGTAAAGTTCCATAAGGCCAAAGTGTGGGAAATTAAGCATCAAGAATTCGAATCATCAGTGGCTTGCGACGATGGAACTGAAATCAAAGCAAATTTGGTGATCGACACAAGTGGGTTCGCAAGCAGATTCACAGAGTATTCAAATTCGAAGCCAAGAAACTGCGGCTTTCAAATCGCCCATGGAATTCTAGCAGAAGTCGAACAGCACCCATTCGATCTAAACAAGATGGTTCTAATGGATTGGAGAGACACCCATTTAGGGAACGAGCCATACCTGAGACAAGACAACAAAAAATCCCCAACATTCCTCTACGCAATGCCATTCGATTCCAATCTAATCTTCCTGGAAGAGACCTCCCTCGTCGGCCGCCCAGCGCTGCCGTACGCGGTGGTGAAGAGGAGAATGGCAGCCAGACTGCGGCACTTGGGGATAAAGGTGAAGAGAATCTTAGAAGAGGAGAAGTGCGTGATTCCGATGGGGGGTTCTCTACCGAAGATGCCTCAGGCAGTGGTGGCGGCAGGTGGGGTGGCAGGGATGGTGCATCCGGCAAGTGGGTACTCGGTGGTTTTGGGAATGGCAGCGGCGCCAGGGGTTGCGAGAAGGGCCGCGGAGGGGCTAGGCAGCGGCGGGAGGATGATCAGAGGCAGGGCGCTGCAGGGGAGGGTTTGGGAAGGGGTGTGGCCGGCGGAGAGGAGACGTGTGAGGGAGTTTTATTGCTTTGGGATGGAGACGTTGGTGCGGCTTGATTTGGAAGGGTTGAGGAGGTTTTTTGATGCGTTTTTTGATTTGGAAGGGTTTTATTGGGAGGGCTTCTTGTCTTCAAGGTTGTCTATTAGGGAGTTGGGTATGTTGGGATTGTTACTCTTTGGACATGCCTCTCCTATGTCTAAGCTTGATATTCTAACTAAATGCCCTCTTCCTCTTGCTAAAATGATGGCTAATCTTGCCCTCCAAGCTTTGTGA

Homology

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BLAST of CmoCh13G003900 vs. Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplastic OS=Citrus sinensis GN=CCS PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 2.2e-183
Identity = 325/505 (64.36%), Postives = 383/505 (75.84%), Query Frame = 1


Query: 7   LLSPFS---------LPDIPSSPIHSPFRTHFQPHCTLR------------RFGNFLDLK 66
           LLSPFS         + D  SSP  S F    Q  C+ +            +FGNFL+L 
Sbjct: 4   LLSPFSPSPLAKVSQIIDSTSSPSFSLFPLGRQNACSRKADHHHHHRIRTSKFGNFLELT 63

Query: 67  PESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQLSA-YGIKVCCVDPSPLS 126
           PES P+ L FDLP FHP SDR  R+DV+++G GPAGLRLAEQ+S+ + +KVCCVDPSPLS
Sbjct: 64  PESVPEFLDFDLPWFHP-SDR-IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 123

Query: 127 PWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEE 186
            WPNNYGVWVDEF+ +G  DC  KTWPM  V++ND K K+LDRPY +VSR  LK KL+E 
Sbjct: 124 TWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLEN 183

Query: 187 CATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCG 246
           C + GVKFHKAKVW + HQEFESS+ CDDG EIKA+L++D SGFAS F EY   KPRN G
Sbjct: 184 CVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEY--DKPRNHG 243

Query: 247 FQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFL 306
           +QIAHGILAEVE HPFDL+KMVLMDWRD+HLGNEPYLR  N K PTFLYAMPFDSNL+FL
Sbjct: 244 YQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFL 303

Query: 307 EETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGG 366
           EETSLV RP L Y  VK RMAARLRH+GI+VKR++E+EKC+IPMGG LP +PQ+V+A GG
Sbjct: 304 EETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGG 363

Query: 367 VAGMVHPASGYSVVLGMAAAPGVARRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVR 426
            +G++HPA+GY V   MA AP +A   AE LGS  RMIRGR L  +VW G+WP +RR  R
Sbjct: 364 TSGLIHPATGYMVARTMALAPALADAIAECLGS-TRMIRGRPLHQKVWNGLWPIDRRCNR 423

Query: 427 EFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPM 486
           EFY FGMETL++LDL+G RRFFDAFFDL  +YW GFLSSRLS+ EL  L L LFGHAS  
Sbjct: 424 EFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFLSSRLSLAELAGLSLSLFGHASNS 483

Query: 487 SKLDILTKCPLPLAKMMANLALQAL 490
           S+LDI+TKCP+PL KMM NLAL+ +
Sbjct: 484 SRLDIVTKCPVPLVKMMGNLALETI 503

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BLAST of CmoCh13G003900 vs. Swiss-Prot
Match: NSY_SOLLC (Neoxanthin synthase, chloroplastic OS=Solanum lycopersicum GN=NSY PE=1 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 1.7e-175
Identity = 298/462 (64.50%), Postives = 364/462 (78.79%), Query Frame = 1


Query: 33  CTLRR-----FGNFLDLKPESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQ 92
           C LR      F +FLDL P SKP+ L  ++    P S+R + FDV+++GAGPAGLRLAEQ
Sbjct: 41  CLLRNKSSKLFCSFLDLAPTSKPESLDVNISWVDPNSNRAQ-FDVIIIGAGPAGLRLAEQ 100

Query: 93  LSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDR 152
           +S YGIKVCCVDPSPLS WPNNYGVWVDEF+ LG +DC    WPM  V++ND K K+L R
Sbjct: 101 VSKYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLEDCLDHKWPMTCVHINDNKTKYLGR 160

Query: 153 PYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSG 212
           PY +VSRKKLK+KL+  C    VKF+KAKVW+++H+EFESS+ CDDG +I+ +LV+D SG
Sbjct: 161 PYGRVSRKKLKLKLLNSCVENRVKFYKAKVWKVEHEEFESSIVCDDGKKIRGSLVVDASG 220

Query: 213 FASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKK 272
           FAS F EY   +PRN G+QIAHG+L EV+ HPFDL+KMVLMDWRD+HLGNEPYLR +N K
Sbjct: 221 FASDFIEYD--RPRNHGYQIAHGVLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNAK 280

Query: 273 SPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIP 332
            PTFLYAMPFD +L+FLEETSLV RP L Y  VKRRM ARLRHLGIKVK ++EEEKCVIP
Sbjct: 281 EPTFLYAMPFDRDLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGIKVKSVIEEEKCVIP 340

Query: 333 MGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVARRAAEGLGSGGRMIRGRAL 392
           MGG LP++PQ V+A GG +G+VHP++GY V   MA AP +A    EGLGS  RMIRG  L
Sbjct: 341 MGGPLPRIPQNVMAIGGNSGIVHPSTGYMVARSMALAPVLAEAIVEGLGS-TRMIRGSQL 400

Query: 393 QGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSI 452
             RVW G+WP +RR VRE Y FGMETL++LDL+G RR FDAFFDL+  YW+GFLSSRLS+
Sbjct: 401 YHRVWNGLWPLDRRCVRECYSFGMETLLKLDLKGTRRLFDAFFDLDPKYWQGFLSSRLSV 460

Query: 453 RELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQAL 490
           +ELG+L L LFGH S M++LDI+TKCPLPL +++ NLA+++L
Sbjct: 461 KELGLLSLCLFGHGSNMTRLDIVTKCPLPLVRLIGNLAIESL 498

[Close]

BLAST of CmoCh13G003900 vs. Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 5.1e-172
Identity = 290/464 (62.50%), Postives = 363/464 (78.23%), Query Frame = 1


Query: 26  RTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLA 85
           + HF+   + + F +FLDL P SKP+    ++ L  P S R + FDV+++GAGPAGLRLA
Sbjct: 40  KCHFRNESS-KLFCSFLDLAPISKPESFDVNISLVDPNSGRAQ-FDVIIIGAGPAGLRLA 99

Query: 86  EQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFL 145
           E +S YGIKVCCVDPSPLS WPNNYGVWVDEF+ LG +DC    WPM  V++ND K K+L
Sbjct: 100 EHVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLEDCLDHKWPMTCVHINDHKTKYL 159

Query: 146 DRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDT 205
            RPY +VSRKKLK++L+  C    VKF+KAKVW+++H+EFESS+ CDDG +I+ +LV+D 
Sbjct: 160 GRPYGRVSRKKLKLRLLNSCVENRVKFYKAKVWKVEHEEFESSIVCDDGKKIRGSLVVDA 219

Query: 206 SGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDN 265
           SGFAS F EY   KPRN G+QIAHG+L EV+ HPFDL+KMVLMDWRD+HLGNEPYLR +N
Sbjct: 220 SGFASDFIEYD--KPRNHGYQIAHGVLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNN 279

Query: 266 KKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCV 325
            K PTFLYAMPFD NL+FLEETSLV RP L Y  VKRRM ARLRHLGIKV+ ++EEEKCV
Sbjct: 280 AKEPTFLYAMPFDRNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGIKVRSVIEEEKCV 339

Query: 326 IPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVARRAAEGLGSGGRMIRGR 385
           IPMGG LP++PQ V+A GG +G+VHP++GY V   MA AP +A    +GLGS  RMIRG 
Sbjct: 340 IPMGGPLPRIPQNVMAIGGNSGIVHPSTGYMVARSMALAPVLAEAIVKGLGS-TRMIRGS 399

Query: 386 ALQGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRL 445
            L  RVW G+WP +RR + E Y FGMETL++LDL+G RR FDAFFDL+  YW+GFLSSRL
Sbjct: 400 QLYHRVWNGLWPLDRRCIGECYSFGMETLLKLDLKGTRRLFDAFFDLDPKYWQGFLSSRL 459

Query: 446 SIRELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQAL 490
           S++EL +L L LFGH S +++LDI+TKCP+PL +++ NLA+++L
Sbjct: 460 SVKELAILSLCLFGHGSNLTRLDIVTKCPVPLVRLIGNLAIESL 498

[Close]

BLAST of CmoCh13G003900 vs. Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplastic OS=Capsicum annuum GN=CCS PE=2 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 3.3e-171
Identity = 300/499 (60.12%), Postives = 371/499 (74.35%), Query Frame = 1


Query: 7   LLSPFSLP--DIPSSPIHSPFRTHFQPHCTLRR--------------FGNFLDLKPESKP 66
           LL PF  P   IP+  ++S       P+ T ++              F +FLDL P SKP
Sbjct: 4   LLKPFPSPLLSIPTPNMYSFKHNSTFPNPTKQKDSRKFHYRNKSSTHFCSFLDLAPTSKP 63

Query: 67  QPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNY 126
           + L  ++       D    FDV+++G GPAGLRLAEQ+S YGIKVCCVDPSPLS WPNNY
Sbjct: 64  ESLDVNISWVDTDLDGAE-FDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNY 123

Query: 127 GVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGV 186
           GVWVDEF+ LG +DC    WP++ V+++D K K+LDRPY +VSRKKLK+KL+  C    V
Sbjct: 124 GVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRV 183

Query: 187 KFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHG 246
           KF+KAKV ++KH+EFESS+ CDDG +I  +L++D SG+AS F EY   KPRN G+Q+AHG
Sbjct: 184 KFYKAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGYASDFIEYD--KPRNHGYQVAHG 243

Query: 247 ILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLV 306
           ILAEV+ HPFDL+KM+LMDWRD+HLGNEPYLR  N K PTFLYAMPFD NL+FLEETSLV
Sbjct: 244 ILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLVFLEETSLV 303

Query: 307 GRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVH 366
            RP L Y  VKRRM ARLRHLGIKV+ +LEEEKCVI MGG LP++PQ V+A GG +G+VH
Sbjct: 304 SRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVH 363

Query: 367 PASGYSVVLGMAAAPGVARRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFG 426
           P+SGY V   MA AP +A    E LGS  RMIRG  L  RVW G+WP++RRRVRE YCFG
Sbjct: 364 PSSGYMVARSMALAPVLAEAIVESLGS-TRMIRGSQLYHRVWNGLWPSDRRRVRECYCFG 423

Query: 427 METLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDIL 486
           METL++LDLEG RR FDAFFD++  YW GFLSSRLS++EL +L L LFGHAS +++LDI+
Sbjct: 424 METLLKLDLEGTRRLFDAFFDVDPKYWHGFLSSRLSVKELAVLSLYLFGHASNLARLDIV 483

Query: 487 TKCPLPLAKMMANLALQAL 490
           TKC +PL K++ NLA+++L
Sbjct: 484 TKCTVPLVKLLGNLAIESL 498

[Close]

BLAST of CmoCh13G003900 vs. Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 9.6e-139
Identity = 246/444 (55.41%), Postives = 319/444 (71.85%), Query Frame = 1


Query: 42  LDLKPESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPS 101
           LDL PE+K + L F+LPL+   + + +  D+ +VG GPAGL +A+Q+S  G+ VC +DPS
Sbjct: 57  LDLVPETKKENLDFELPLYD--TSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPS 116

Query: 102 PLSPWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKL 161
           P   WPNNYGVWVDEF+A+   DC   TW  A VY+++   K L RPY +V+RK+LK K+
Sbjct: 117 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKM 176

Query: 162 MEECATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPR 221
           +++C T GVKFH++KV  + H+E  S+V C DG +I+A++V+D +GF+    +Y   KP 
Sbjct: 177 LQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYD--KPY 236

Query: 222 NCGFQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNL 281
           N G+Q+A+GI+AEV+ HPFD++KMV MDWRD HL + P L++ N K PTFLYAMPF SN 
Sbjct: 237 NPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNR 296

Query: 282 IFLEETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVA 341
           IFLEETSLV RP L    ++ RMAARL+HLGI VKRI E+E+CVIPMGG LP +PQ VV 
Sbjct: 297 IFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVG 356

Query: 342 AGGVAGMVHPASGYSVVLGMAAAPGVARRAAEGLGS-GGRMIRGRALQGRVWEGVWPAER 401
            GG AGMVHP++GY V   +AAAP VA      LGS     +RG  L   VW  +WP ER
Sbjct: 357 IGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIER 416

Query: 402 RRVREFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGH 461
           RR REF+CFGM+ L++LDL+  RRFFDAFFDL+  YW GFLSSRL + EL + GL LF H
Sbjct: 417 RRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSH 476

Query: 462 ASPMSKLDILTKCPLPLAKMMANL 485
           AS  S+L+I+TK  +PLAKM+ NL
Sbjct: 477 ASNTSRLEIMTKGTVPLAKMINNL 496

[Close]

BLAST of CmoCh13G003900 vs. TrEMBL
Match: A0A0A0KY78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001730 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 4.2e-226
Identity = 393/491 (80.04%), Postives = 425/491 (86.56%), Query Frame = 1


Query: 1   MAISHALLSPFS-LPDIPSSPIHSPFRTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPL 60
           MA S  LLSPFS LP +PS PI SP +  FQ H T  +F NFLDLKPESKPQPLK DLPL
Sbjct: 1   MANSQILLSPFSCLPRLPSYPIQSPSKNRFQIHSTFAKFDNFLDLKPESKPQPLKLDLPL 60

Query: 61  FHPYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQA 120
           FHPY DR  RFDVVVVGAGP GLR+AEQL  +GIKVCCVDPSPLSPW NNYGVWVDEF+ 
Sbjct: 61  FHPYYDR-SRFDVVVVGAGPIGLRVAEQLGGFGIKVCCVDPSPLSPWSNNYGVWVDEFED 120

Query: 121 LGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWE 180
           LG +DC HKTWPMASVYL+DEKVK+LDRPYAQVSRKKLKMKLMEEC +KGVKFHKAKVWE
Sbjct: 121 LGLEDCLHKTWPMASVYLSDEKVKYLDRPYAQVSRKKLKMKLMEECISKGVKFHKAKVWE 180

Query: 181 IKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHP 240
           I HQ+FESSV+C+DGTEIK+NLVID SGF S+FT+YS S PRNC FQIAHGILAEV+ HP
Sbjct: 181 INHQQFESSVSCNDGTEIKSNLVIDASGFTSKFTKYSESNPRNCAFQIAHGILAEVDHHP 240

Query: 241 FDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAV 300
           FDLNKMVLMDWRDTHL NEPYLRQDNKK PTFLYAMPFDSNLIFLEETSL GRPA+PY  
Sbjct: 241 FDLNKMVLMDWRDTHLNNEPYLRQDNKKFPTFLYAMPFDSNLIFLEETSLAGRPAMPYTA 300

Query: 301 VKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVL 360
           VK+RMAARLRHLGIKVKRI+EEEKCVIPMGG+LPKMPQAVV  GGVAGMV+PASGY+VV 
Sbjct: 301 VKKRMAARLRHLGIKVKRIIEEEKCVIPMGGALPKMPQAVVGVGGVAGMVNPASGYAVVK 360

Query: 361 GMAAAPGVARRAAEGL-GSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLD 420
           GM AA  +AR AAEG+ G GGRMIRGRAL+GRVWEGVWP E R VREFYCFGME LVRLD
Sbjct: 361 GMGAAGRIARVAAEGVGGGGGRMIRGRALEGRVWEGVWPMEERNVREFYCFGMEILVRLD 420

Query: 421 LEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLA 480
           L+G+R FF+AFFDLE  YWEG LSSRLS+ ELGML L L+ HAS  SKLDILTK PLPL 
Sbjct: 421 LDGIRGFFNAFFDLEPSYWEGLLSSRLSLLELGMLSLSLYQHASFRSKLDILTKSPLPLL 480

Query: 481 KMMANLALQAL 490
           +MMANL L AL
Sbjct: 481 QMMANLTLHAL 490

[Close]

BLAST of CmoCh13G003900 vs. TrEMBL
Match: M5VYW6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004650mg PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 4.4e-183
Identity = 318/480 (66.25%), Postives = 380/480 (79.17%), Query Frame = 1


Query: 9   SPFSLPDIPSSPIHSPFRTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPLFHPYSDRPR 68
           SPFS+P       H P            +FGNFLDLKPESKP+   FDLP F P S    
Sbjct: 27  SPFSIPKT-----HHPSSRKSFSKIQSSKFGNFLDLKPESKPEFFDFDLPKFDPSSRS-- 86

Query: 69  RFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHK 128
           R DV+++G GPAGLRLAEQ+S+YGIKVCCVDPSPLS WPNNYGVWVDEF++L  ++C  K
Sbjct: 87  RLDVIIIGTGPAGLRLAEQVSSYGIKVCCVDPSPLSMWPNNYGVWVDEFESLNLENCLDK 146

Query: 129 TWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESS 188
           TWPMA V+++D K K+LDRPY +VSRKKLK  L+E C + GV+FH+AKVW+I+HQEFESS
Sbjct: 147 TWPMACVHVDDNKTKYLDRPYGRVSRKKLKTLLLERCLSNGVQFHRAKVWKIQHQEFESS 206

Query: 189 VACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLM 248
           + CDDG E+KA+LV+D SGFAS F EY   KPRN G+QIAHGILAEVE+HPFDL+KM+LM
Sbjct: 207 ILCDDGNELKASLVVDASGFASSFIEYE--KPRNHGYQIAHGILAEVEEHPFDLDKMLLM 266

Query: 249 DWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARL 308
           DWR++HLGNEPYLR  N K PTFLYAMPFDSNL+FLEETSLV RP L Y  VK+RM ARL
Sbjct: 267 DWRNSHLGNEPYLRTSNSKFPTFLYAMPFDSNLVFLEETSLVSRPVLSYIEVKKRMVARL 326

Query: 309 RHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVA 368
           RHLGI+VKRI+E+EKC+IPMGG LP++PQ+V+A GG +G+VHP++GY V   MA AP +A
Sbjct: 327 RHLGIRVKRIIEDEKCLIPMGGPLPRIPQSVMAIGGTSGVVHPSTGYMVARTMALAPILA 386

Query: 369 RRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDA 428
              AE LGS  RMIRG+ L  + W G+WP ERR VREFY FGMETL++LDL+G RRFFDA
Sbjct: 387 EAIAECLGS-TRMIRGQPLYHKAWNGLWPIERRCVREFYSFGMETLLKLDLDGSRRFFDA 446

Query: 429 FFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQA 488
           FFDL+ +YW GFLSSRLS+REL +L L LFG AS  S+ DI+TKCPLPL K+M NLAL+A
Sbjct: 447 FFDLDPYYWHGFLSSRLSLRELALLSLSLFGRASFPSRFDIVTKCPLPLVKLMGNLALEA 496

[Close]

BLAST of CmoCh13G003900 vs. TrEMBL
Match: B9HQ44_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16140g PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 1.1e-181
Identity = 317/478 (66.32%), Postives = 378/478 (79.08%), Query Frame = 1


Query: 18  SSPIHSPFRTHFQPHCTLR------RFGNFLDLKPESKPQPLKFDLPLFHPYSDRPRRFD 77
           S P+ S  + H  P    R      +FG+FLDLKPESKP+ L FDL  F P +DRPR FD
Sbjct: 23  SPPLFSSPKPHITPSRKSRYGIQSSKFGSFLDLKPESKPEFLDFDLSWFDP-ADRPRCFD 82

Query: 78  VVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHKTWP 137
           V+++GAGPAGLRLAEQ+S YGIKVCCVDPSPLS WPNNYGVWVDEF++LG  DC  KTWP
Sbjct: 83  VIIIGAGPAGLRLAEQVSGYGIKVCCVDPSPLSMWPNNYGVWVDEFESLGLVDCLDKTWP 142

Query: 138 MASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESSVAC 197
           M  V+++D+  K+LDRPY +V RK++K KL+E CA+ GV+FHKAKV  ++H+EFESS+ C
Sbjct: 143 MTCVHIDDDTTKYLDRPYGRVGRKEVKTKLLENCASNGVRFHKAKVLNLEHKEFESSIVC 202

Query: 198 DDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLMDWR 257
           DDG E+KA+LV+D SGFAS FTEY   KPRN G+QIAHGILAEV+ HPFDL+KMVLMDWR
Sbjct: 203 DDGIELKASLVVDASGFASTFTEY--DKPRNHGYQIAHGILAEVDCHPFDLDKMVLMDWR 262

Query: 258 DTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARLRHL 317
           D+H+GNEPYLR +N K PTFLYAMPFDSNL+FLEETSLV RP L Y  VK RM ARLRHL
Sbjct: 263 DSHMGNEPYLRANNSKIPTFLYAMPFDSNLVFLEETSLVSRPLLSYMEVKNRMVARLRHL 322

Query: 318 GIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVARRA 377
           GI+VK ++E EKCVIPMGG  PK+PQ+V+A GG +G+VHP++GY+V   MA AP VA   
Sbjct: 323 GIRVKTVIENEKCVIPMGGPRPKIPQSVMAIGGTSGVVHPSTGYTVARTMALAPIVADAI 382

Query: 378 AEGLGSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDAFFD 437
            E LGS  RMIRGR L  RVW G+WP ERR  REFY FGMETL++LDL G RRFFDAFFD
Sbjct: 383 VECLGS-TRMIRGRPLHHRVWNGLWPLERRCTREFYSFGMETLLKLDLNGTRRFFDAFFD 442

Query: 438 LEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQAL 490
           L+ +YW+GFLSSRLS+REL  L L LF +AS  S+ DI+TKCP+PL KMM NLAL+ +
Sbjct: 443 LDPYYWQGFLSSRLSLRELLFLSLSLFSNASNPSRFDIVTKCPVPLVKMMGNLALETI 496

[Close]

BLAST of CmoCh13G003900 vs. TrEMBL
Match: A0A067F4M0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010693mg PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 1.9e-181
Identity = 326/505 (64.55%), Postives = 383/505 (75.84%), Query Frame = 1


Query: 7   LLSPFS---------LPDIPSSPIHSPFRTHFQPHCTLR------------RFGNFLDLK 66
           LLSPFS         + D  SSP  S F    Q  C+ +            +FGNFL+L 
Sbjct: 4   LLSPFSPSPLAKVSQIIDSTSSPSFSLFPLGRQNACSRKADHHHHHRIRTSKFGNFLELT 63

Query: 67  PESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQLSA-YGIKVCCVDPSPLS 126
           PES P+ L FDLP FHP SDR  R+DV+++G GPAGLRLAEQ+S+ + +KVCCVDPSPLS
Sbjct: 64  PESVPEFLDFDLPWFHP-SDR-IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 123

Query: 127 PWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEE 186
            WPNNYGVWVDEF+ +G  DC  KTWPM  V++ND K K+LDRPY +VSR  LK KL+E 
Sbjct: 124 TWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLEN 183

Query: 187 CATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCG 246
           C + GVKFHKAKVW + HQEFESS+ CDDG EIKA+L++D SGFAS F EY   KPRN G
Sbjct: 184 CVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEY--DKPRNHG 243

Query: 247 FQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFL 306
           +QIAHGILAEVE HPFDL+KMVLMDWRD+HLGNEPYLR  N K PTFLYAMPFDSNL+FL
Sbjct: 244 YQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFL 303

Query: 307 EETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGG 366
           EETSLV RP L Y  VKRRMAARLRH+GI+VKR++E+EKC+IPMGG LP +PQ+V+A G 
Sbjct: 304 EETSLVSRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGS 363

Query: 367 VAGMVHPASGYSVVLGMAAAPGVARRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVR 426
            +G+VHP++GY V   MA AP +A   AE LGS  RMIRGR L  +VW G+WP +RR  R
Sbjct: 364 TSGLVHPSTGYMVARTMALAPALADAIAECLGS-TRMIRGRPLHQKVWNGLWPIDRRCNR 423

Query: 427 EFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPM 486
           EFY FGMETL++LDL+G RRFFDAFFDL  +YW GFLSSRLS+ EL  L L LFGHAS  
Sbjct: 424 EFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFLSSRLSLAELAGLSLSLFGHASNS 483

Query: 487 SKLDILTKCPLPLAKMMANLALQAL 490
           S+LDI+TKCPLPL KMM NLAL+ +
Sbjct: 484 SRLDIVTKCPLPLVKMMGNLALETI 503

[Close]

BLAST of CmoCh13G003900 vs. TrEMBL
Match: V4SF13_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028245mg PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 2.4e-181
Identity = 325/505 (64.36%), Postives = 383/505 (75.84%), Query Frame = 1


Query: 7   LLSPFS---------LPDIPSSPIHSPFRTHFQPHCTLR------------RFGNFLDLK 66
           LLSPFS         + D  SSP  S F    Q  C+ +            +FGNFL+L 
Sbjct: 4   LLSPFSPSPLAKVSQIIDSTSSPSFSLFPLGRQNACSRKADHHHHHRIRTSKFGNFLELT 63

Query: 67  PESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQLSA-YGIKVCCVDPSPLS 126
           PES P+ L FDLP FHP SDR  R+DV+++G GPAGLRLAEQ+S+ + +KVCCVDPSPLS
Sbjct: 64  PESVPEFLDFDLPWFHP-SDR-IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 123

Query: 127 PWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEE 186
            WPNNYGVWVDEF+ +G  DC  KTWPM  V++ND K K+LDRPY +VSR  LK KL+E 
Sbjct: 124 TWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLEN 183

Query: 187 CATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCG 246
           C + GVKFHKAKVW + HQEFESS+ CDDG EIKA+L++D SGFAS F EY   KPRN G
Sbjct: 184 CVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEY--DKPRNHG 243

Query: 247 FQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFL 306
           +QIAHGILAEVE HPFDL+KMVLMDWRD+HLGNEPYLR  N K PTFLYAMPFDSNL+FL
Sbjct: 244 YQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFL 303

Query: 307 EETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGG 366
           EETSLV RP L Y  VK RMAARLRH+GI+VKR++E+EKC+IPMGG LP +PQ+V+A GG
Sbjct: 304 EETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGG 363

Query: 367 VAGMVHPASGYSVVLGMAAAPGVARRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVR 426
            +G++HPA+GY V   MA AP +A   AE LGS  RMIRGR L  +VW G+WP +RR  R
Sbjct: 364 TSGLIHPATGYMVARTMALAPALADAIAECLGS-TRMIRGRPLHQKVWNGLWPIDRRCNR 423

Query: 427 EFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPM 486
           EFY FGMETL++LDL+G RRFFDAFFDL  +YW GFLSSRLS+ EL  L L LFGHAS  
Sbjct: 424 EFYSFGMETLLKLDLKGTRRFFDAFFDLNPYYWHGFLSSRLSLAELAGLSLSLFGHASNS 483

Query: 487 SKLDILTKCPLPLAKMMANLALQAL 490
           S+LDI+TKCP+PL KMM NLAL+ +
Sbjct: 484 SRLDIVTKCPVPLVKMMGNLALETI 503

[Close]

BLAST of CmoCh13G003900 vs. TAIR10
Match: AT3G10230.1 (AT3G10230.1 lycopene cyclase)

HSP 1 Score: 495.0 bits (1273), Expect = 5.4e-140
Identity = 246/444 (55.41%), Postives = 319/444 (71.85%), Query Frame = 1


Query: 42  LDLKPESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPS 101
           LDL PE+K + L F+LPL+   + + +  D+ +VG GPAGL +A+Q+S  G+ VC +DPS
Sbjct: 57  LDLVPETKKENLDFELPLYD--TSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPS 116

Query: 102 PLSPWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKL 161
           P   WPNNYGVWVDEF+A+   DC   TW  A VY+++   K L RPY +V+RK+LK K+
Sbjct: 117 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKM 176

Query: 162 MEECATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPR 221
           +++C T GVKFH++KV  + H+E  S+V C DG +I+A++V+D +GF+    +Y   KP 
Sbjct: 177 LQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYD--KPY 236

Query: 222 NCGFQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNL 281
           N G+Q+A+GI+AEV+ HPFD++KMV MDWRD HL + P L++ N K PTFLYAMPF SN 
Sbjct: 237 NPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNR 296

Query: 282 IFLEETSLVGRPALPYAVVKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVA 341
           IFLEETSLV RP L    ++ RMAARL+HLGI VKRI E+E+CVIPMGG LP +PQ VV 
Sbjct: 297 IFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVG 356

Query: 342 AGGVAGMVHPASGYSVVLGMAAAPGVARRAAEGLGS-GGRMIRGRALQGRVWEGVWPAER 401
            GG AGMVHP++GY V   +AAAP VA      LGS     +RG  L   VW  +WP ER
Sbjct: 357 IGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIER 416

Query: 402 RRVREFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGH 461
           RR REF+CFGM+ L++LDL+  RRFFDAFFDL+  YW GFLSSRL + EL + GL LF H
Sbjct: 417 RRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSH 476

Query: 462 ASPMSKLDILTKCPLPLAKMMANL 485
           AS  S+L+I+TK  +PLAKM+ NL
Sbjct: 477 ASNTSRLEIMTKGTVPLAKMINNL 496

[Close]

BLAST of CmoCh13G003900 vs. TAIR10
Match: AT5G57030.1 (AT5G57030.1 Lycopene beta/epsilon cyclase protein)

HSP 1 Score: 273.1 bits (697), Expect = 3.4e-73
Identity = 161/399 (40.35%), Postives = 221/399 (55.39%), Query Frame = 1


Query: 62  PYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALG 121
           P S      D+VV+G GPAGL LA + +  G+KV  + P    P+ NNYGVW DEF  LG
Sbjct: 101 PISIGDGALDLVVIGCGPAGLALAAESAKLGLKVGLIGPD--LPFTNNYGVWEDEFNDLG 160

Query: 122 FQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIK 181
            Q C    W    VYL+D+K   + R Y +VSR+ L  +L+  C   GV +  +KV  I 
Sbjct: 161 LQKCIEHVWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSIT 220

Query: 182 H-QEFESSVACDDGTEIKANLVIDTSGFAS-RFTEYSNSKPRNCGFQIAHGILAEVEQHP 241
              +    VACDD   I   L    SG AS +  +Y    PR C  Q A+G+  EVE  P
Sbjct: 221 EASDGLRLVACDDNNVIPCRLATVASGAASGKLLQYEVGGPRVC-VQTAYGVEVEVENSP 280

Query: 242 FDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAV 301
           +D ++MV MD+RD    NE  +R    + PTFLYAMP   + +F EET L  +  +P+ +
Sbjct: 281 YDPDQMVFMDYRD--YTNEK-VRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDL 340

Query: 302 VKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVL 361
           +K ++  RL  LGI++ +  EEE   IP+GGSLP   Q  +A G  A MVHPA+GYSVV 
Sbjct: 341 LKTKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVR 400

Query: 362 GMAAAPGVARRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLDL 421
            ++ AP  A   AE L           +  + W+ +WP ER+R R F+ FG+  +V+ D 
Sbjct: 401 SLSEAPKYASVIAEILREETTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDT 460

Query: 422 EGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLF 459
           EG+R FF  FF L  + W+GFL S L+  +L +  L +F
Sbjct: 461 EGIRSFFRTFFRLPKWMWQGFLGSTLTSGDLVLFALYMF 493

[Close]

BLAST of CmoCh13G003900 vs. NCBI nr
Match: gi|659108717|ref|XP_008454352.1| (PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Cucumis melo])

HSP 1 Score: 793.9 bits (2049), Expect = 1.6e-226
Identity = 393/491 (80.04%), Postives = 429/491 (87.37%), Query Frame = 1


Query: 1   MAISHALLSPF-SLPDIPSSPIHSPFRTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPL 60
           MA S  LLSPF SLP +PS+PI SP + H Q H T  +F NFLDLKPESKP+PLK DLPL
Sbjct: 1   MANSRFLLSPFFSLPQLPSNPIQSPSKNHLQIHSTFAKFDNFLDLKPESKPKPLKLDLPL 60

Query: 61  FHPYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQA 120
           FHPY DR  RFDVVVVGAGP GLR+AEQL  +GIKVCCVDPSPLSPW NNYGVWVDEF+ 
Sbjct: 61  FHPYYDR-SRFDVVVVGAGPIGLRVAEQLGGFGIKVCCVDPSPLSPWSNNYGVWVDEFED 120

Query: 121 LGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWE 180
           LG +DC HKTWPMAS+YL+DEKVK+LDRPYAQVSRKKLKMKLMEEC  KGVKFHKAKVWE
Sbjct: 121 LGLEDCLHKTWPMASLYLSDEKVKYLDRPYAQVSRKKLKMKLMEECIRKGVKFHKAKVWE 180

Query: 181 IKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHP 240
           I HQ+FESSV+C+DGTEIK+NLVID SGF S+FT+YS+S PRNC FQIAHGILAEV+ HP
Sbjct: 181 INHQQFESSVSCNDGTEIKSNLVIDASGFTSKFTKYSDSNPRNCAFQIAHGILAEVDHHP 240

Query: 241 FDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAV 300
           FDLNKMVLMDWRDTHL NEPYLRQ NK+ PTFLYAMPFDSNLIFLEETSLVGRPALPY V
Sbjct: 241 FDLNKMVLMDWRDTHLNNEPYLRQHNKEFPTFLYAMPFDSNLIFLEETSLVGRPALPYTV 300

Query: 301 VKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVL 360
           VK+RMAARLRHLGIKVKRILEEEKCVIPMGG+LP+MPQAVV  GGVAGMV+PASGY+VV 
Sbjct: 301 VKKRMAARLRHLGIKVKRILEEEKCVIPMGGALPEMPQAVVGVGGVAGMVNPASGYAVVK 360

Query: 361 GMAAAPGVARRAAEGL-GSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLD 420
           GMAAA  +AR A EG+ G GGRMIRGRAL+GRVWEGVWP E R VREFYCFGME L+RLD
Sbjct: 361 GMAAAGRIARVAGEGVGGGGGRMIRGRALEGRVWEGVWPMEERNVREFYCFGMEILMRLD 420

Query: 421 LEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLA 480
           L+G+R FF+AFFDLE FYWEGFLSSRLS+ EL ML L L+ HAS  SKLDILTK PLPL 
Sbjct: 421 LDGIRGFFNAFFDLEPFYWEGFLSSRLSLLELAMLSLSLYQHASFRSKLDILTKSPLPLL 480

Query: 481 KMMANLALQAL 490
           +MMANL LQAL
Sbjct: 481 QMMANLTLQAL 490

[Close]

BLAST of CmoCh13G003900 vs. NCBI nr
Match: gi|778689289|ref|XP_011652931.1| (PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Cucumis sativus])

HSP 1 Score: 792.0 bits (2044), Expect = 6.1e-226
Identity = 393/491 (80.04%), Postives = 425/491 (86.56%), Query Frame = 1


Query: 1   MAISHALLSPFS-LPDIPSSPIHSPFRTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPL 60
           MA S  LLSPFS LP +PS PI SP +  FQ H T  +F NFLDLKPESKPQPLK DLPL
Sbjct: 1   MANSQILLSPFSCLPRLPSYPIQSPSKNRFQIHSTFAKFDNFLDLKPESKPQPLKLDLPL 60

Query: 61  FHPYSDRPRRFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQA 120
           FHPY DR  RFDVVVVGAGP GLR+AEQL  +GIKVCCVDPSPLSPW NNYGVWVDEF+ 
Sbjct: 61  FHPYYDR-SRFDVVVVGAGPIGLRVAEQLGGFGIKVCCVDPSPLSPWSNNYGVWVDEFED 120

Query: 121 LGFQDCFHKTWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWE 180
           LG +DC HKTWPMASVYL+DEKVK+LDRPYAQVSRKKLKMKLMEEC +KGVKFHKAKVWE
Sbjct: 121 LGLEDCLHKTWPMASVYLSDEKVKYLDRPYAQVSRKKLKMKLMEECISKGVKFHKAKVWE 180

Query: 181 IKHQEFESSVACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHP 240
           I HQ+FESSV+C+DGTEIK+NLVID SGF S+FT+YS S PRNC FQIAHGILAEV+ HP
Sbjct: 181 INHQQFESSVSCNDGTEIKSNLVIDASGFTSKFTKYSESNPRNCAFQIAHGILAEVDHHP 240

Query: 241 FDLNKMVLMDWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAV 300
           FDLNKMVLMDWRDTHL NEPYLRQDNKK PTFLYAMPFDSNLIFLEETSL GRPA+PY  
Sbjct: 241 FDLNKMVLMDWRDTHLNNEPYLRQDNKKFPTFLYAMPFDSNLIFLEETSLAGRPAMPYTA 300

Query: 301 VKRRMAARLRHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVL 360
           VK+RMAARLRHLGIKVKRI+EEEKCVIPMGG+LPKMPQAVV  GGVAGMV+PASGY+VV 
Sbjct: 301 VKKRMAARLRHLGIKVKRIIEEEKCVIPMGGALPKMPQAVVGVGGVAGMVNPASGYAVVK 360

Query: 361 GMAAAPGVARRAAEGL-GSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLD 420
           GM AA  +AR AAEG+ G GGRMIRGRAL+GRVWEGVWP E R VREFYCFGME LVRLD
Sbjct: 361 GMGAAGRIARVAAEGVGGGGGRMIRGRALEGRVWEGVWPMEERNVREFYCFGMEILVRLD 420

Query: 421 LEGLRRFFDAFFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLA 480
           L+G+R FF+AFFDLE  YWEG LSSRLS+ ELGML L L+ HAS  SKLDILTK PLPL 
Sbjct: 421 LDGIRGFFNAFFDLEPSYWEGLLSSRLSLLELGMLSLSLYQHASFRSKLDILTKSPLPLL 480

Query: 481 KMMANLALQAL 490
           +MMANL L AL
Sbjct: 481 QMMANLTLHAL 490

[Close]

BLAST of CmoCh13G003900 vs. NCBI nr
Match: gi|595823631|ref|XP_007205102.1| (hypothetical protein PRUPE_ppa004650mg [Prunus persica])

HSP 1 Score: 649.0 bits (1673), Expect = 6.4e-183
Identity = 318/480 (66.25%), Postives = 380/480 (79.17%), Query Frame = 1


Query: 9   SPFSLPDIPSSPIHSPFRTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPLFHPYSDRPR 68
           SPFS+P       H P            +FGNFLDLKPESKP+   FDLP F P S    
Sbjct: 27  SPFSIPKT-----HHPSSRKSFSKIQSSKFGNFLDLKPESKPEFFDFDLPKFDPSSRS-- 86

Query: 69  RFDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHK 128
           R DV+++G GPAGLRLAEQ+S+YGIKVCCVDPSPLS WPNNYGVWVDEF++L  ++C  K
Sbjct: 87  RLDVIIIGTGPAGLRLAEQVSSYGIKVCCVDPSPLSMWPNNYGVWVDEFESLNLENCLDK 146

Query: 129 TWPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESS 188
           TWPMA V+++D K K+LDRPY +VSRKKLK  L+E C + GV+FH+AKVW+I+HQEFESS
Sbjct: 147 TWPMACVHVDDNKTKYLDRPYGRVSRKKLKTLLLERCLSNGVQFHRAKVWKIQHQEFESS 206

Query: 189 VACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLM 248
           + CDDG E+KA+LV+D SGFAS F EY   KPRN G+QIAHGILAEVE+HPFDL+KM+LM
Sbjct: 207 ILCDDGNELKASLVVDASGFASSFIEYE--KPRNHGYQIAHGILAEVEEHPFDLDKMLLM 266

Query: 249 DWRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARL 308
           DWR++HLGNEPYLR  N K PTFLYAMPFDSNL+FLEETSLV RP L Y  VK+RM ARL
Sbjct: 267 DWRNSHLGNEPYLRTSNSKFPTFLYAMPFDSNLVFLEETSLVSRPVLSYIEVKKRMVARL 326

Query: 309 RHLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVA 368
           RHLGI+VKRI+E+EKC+IPMGG LP++PQ+V+A GG +G+VHP++GY V   MA AP +A
Sbjct: 327 RHLGIRVKRIIEDEKCLIPMGGPLPRIPQSVMAIGGTSGVVHPSTGYMVARTMALAPILA 386

Query: 369 RRAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDA 428
              AE LGS  RMIRG+ L  + W G+WP ERR VREFY FGMETL++LDL+G RRFFDA
Sbjct: 387 EAIAECLGS-TRMIRGQPLYHKAWNGLWPIERRCVREFYSFGMETLLKLDLDGSRRFFDA 446

Query: 429 FFDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQA 488
           FFDL+ +YW GFLSSRLS+REL +L L LFG AS  S+ DI+TKCPLPL K+M NLAL+A
Sbjct: 447 FFDLDPYYWHGFLSSRLSLRELALLSLSLFGRASFPSRFDIVTKCPLPLVKLMGNLALEA 496

[Close]

BLAST of CmoCh13G003900 vs. NCBI nr
Match: gi|743792086|ref|XP_011043447.1| (PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Populus euphratica])

HSP 1 Score: 647.5 bits (1669), Expect = 1.9e-182
Identity = 316/470 (67.23%), Postives = 376/470 (80.00%), Query Frame = 1


Query: 30  QPHCTLRR----------FGNFLDLKPESKPQPLKFDLPLFHPYSDRPRRFDVVVVGAGP 89
           +PH TL R          FG+FLDL PESKP+ L FDL  F P +DRPR FDV+++GAGP
Sbjct: 31  KPHITLSRKSRYGIQSSKFGSFLDLNPESKPEFLDFDLSWFDP-ADRPRCFDVIIIGAGP 90

Query: 90  AGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHKTWPMASVYLND 149
           AGLRLAEQ+S YGIKVCCVDPSPLS WPNNYGVWVDEF+ LG  DC  KTWPM  V+++D
Sbjct: 91  AGLRLAEQVSGYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLVDCLDKTWPMTCVHIDD 150

Query: 150 EKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESSVACDDGTEIKA 209
           +K K+LDRPY +V RK+LK KL+E CA+ GV+FHKAKV  ++H+EF+SS+ CDDGTE++A
Sbjct: 151 DKTKYLDRPYGRVGRKELKTKLLENCASNGVRFHKAKVLNLEHKEFQSSIVCDDGTELRA 210

Query: 210 NLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLMDWRDTHLGNEP 269
           +LV+D SGFAS FTEY   KPRN G+QIAHGILAEV+ HPFDL+KMVLMDWRD+H+GNEP
Sbjct: 211 SLVVDASGFASTFTEY--DKPRNHGYQIAHGILAEVDCHPFDLDKMVLMDWRDSHMGNEP 270

Query: 270 YLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARLRHLGIKVKRIL 329
           YLR +N K PTFLYAMPFDSNL+FLEETSLV RP L Y  VK RM ARLRHLGI+VK ++
Sbjct: 271 YLRANNSKIPTFLYAMPFDSNLVFLEETSLVSRPLLSYMEVKNRMVARLRHLGIRVKNVI 330

Query: 330 EEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVARRAAEGLGSGG 389
           E EKCVIPMGG LPK+PQ+V+A GG +G+VHP++GY+V   MA +P VA    E LGS  
Sbjct: 331 ENEKCVIPMGGPLPKIPQSVMAIGGTSGLVHPSTGYTVARAMALSPIVADAIVECLGS-T 390

Query: 390 RMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDAFFDLEGFYWEG 449
           RMIRGR L  RVW G+WP ERR  REFY FGMETL++LDL G RRFFDAFFDL+ +YW+G
Sbjct: 391 RMIRGRPLHHRVWNGLWPLERRCTREFYSFGMETLLKLDLNGTRRFFDAFFDLDPYYWQG 450

Query: 450 FLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQAL 490
           FLSSRLS+REL  L L LF +AS  S+ DI+TKCP+PL KMM NLAL+ +
Sbjct: 451 FLSSRLSLRELLFLSLSLFSNASNPSRFDIVTKCPVPLVKMMGNLALETI 496

[Close]

BLAST of CmoCh13G003900 vs. NCBI nr
Match: gi|645218134|ref|XP_008229097.1| (PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Prunus mume])

HSP 1 Score: 645.2 bits (1663), Expect = 9.2e-182
Identity = 316/479 (65.97%), Postives = 377/479 (78.71%), Query Frame = 1


Query: 10  PFSLPDIPSSPIHSPFRTHFQPHCTLRRFGNFLDLKPESKPQPLKFDLPLFHPYSDRPRR 69
           PFS P       H P            +FGNFLDLKPESKP+   FDLP F P S    R
Sbjct: 28  PFSFPKT-----HHPSSRKSFSKIQSSKFGNFLDLKPESKPEFFDFDLPKFDPSSRS--R 87

Query: 70  FDVVVVGAGPAGLRLAEQLSAYGIKVCCVDPSPLSPWPNNYGVWVDEFQALGFQDCFHKT 129
            DV+++G GPAGLRLAEQ+S+YGIKVCCVDPSPLS WPNNYGVWVDEF++L  ++C  KT
Sbjct: 88  LDVIIIGTGPAGLRLAEQVSSYGIKVCCVDPSPLSMWPNNYGVWVDEFESLNLENCLDKT 147

Query: 130 WPMASVYLNDEKVKFLDRPYAQVSRKKLKMKLMEECATKGVKFHKAKVWEIKHQEFESSV 189
           WPMA V+++D K K+LDRPY +VSRKKLK   +E C + GV+FH+AKVW+I+HQEFESS+
Sbjct: 148 WPMACVHVDDNKTKYLDRPYGRVSRKKLKTLFLERCLSNGVQFHRAKVWKIQHQEFESSI 207

Query: 190 ACDDGTEIKANLVIDTSGFASRFTEYSNSKPRNCGFQIAHGILAEVEQHPFDLNKMVLMD 249
            CDDG E+KA+LV+D SGFAS F EY   KPRN G+QIAHGILAEVE+HPFDL+KM+LMD
Sbjct: 208 LCDDGNELKASLVVDASGFASSFIEYE--KPRNHGYQIAHGILAEVEEHPFDLDKMLLMD 267

Query: 250 WRDTHLGNEPYLRQDNKKSPTFLYAMPFDSNLIFLEETSLVGRPALPYAVVKRRMAARLR 309
           WR++HLGNEPYLR  N K PTFLYAMPFDSNL+FLEETSLV RP L Y  VK+RM ARLR
Sbjct: 268 WRNSHLGNEPYLRTSNSKFPTFLYAMPFDSNLVFLEETSLVSRPVLSYIEVKKRMVARLR 327

Query: 310 HLGIKVKRILEEEKCVIPMGGSLPKMPQAVVAAGGVAGMVHPASGYSVVLGMAAAPGVAR 369
           HLGI+VKRI+E+EKC+IPMGG LP++PQ+V+A GG +G+VHP++GY V   MA AP +A 
Sbjct: 328 HLGIRVKRIIEDEKCLIPMGGPLPRIPQSVMAIGGTSGVVHPSTGYMVARTMALAPILAE 387

Query: 370 RAAEGLGSGGRMIRGRALQGRVWEGVWPAERRRVREFYCFGMETLVRLDLEGLRRFFDAF 429
             AE LGS  RMIRG+ L  + W G+WP ERR VREFY FGMETL++LDL+G RRFFDAF
Sbjct: 388 AIAECLGS-TRMIRGQPLYHKAWNGLWPIERRCVREFYSFGMETLLKLDLDGSRRFFDAF 447

Query: 430 FDLEGFYWEGFLSSRLSIRELGMLGLLLFGHASPMSKLDILTKCPLPLAKMMANLALQA 489
           FDL+ +YW GFLSSRLS+REL +L L LFG AS  S+ DI+TKCPLPL K+M NLAL+A
Sbjct: 448 FDLDPYYWHGFLSSRLSLRELALLSLSLFGRASFPSRFDIVTKCPLPLVKLMGNLALEA 496

The following BLAST results are available for this feature:

BLAST of CmoCh13G003900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCS_CITSI	2.2e-183	64.36	Capsanthin/capsorubin synthase, chromoplastic OS=Citrus sinensis GN=CCS PE=3 SV=...	[more]
NSY_SOLLC	1.7e-175	64.50	Neoxanthin synthase, chloroplastic OS=Solanum lycopersicum GN=NSY PE=1 SV=1	[more]
NXS_SOLTU	5.1e-172	62.50	Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1	[more]
CCS_CAPAN	3.3e-171	60.12	Capsanthin/capsorubin synthase, chromoplastic OS=Capsicum annuum GN=CCS PE=2 SV=...	[more]
LCYB_ARATH	9.6e-139	55.41	Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1	[more]

BLAST of CmoCh13G003900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY78_CUCSA	4.2e-226	80.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001730 PE=4 SV=1	[more]
M5VYW6_PRUPE	4.4e-183	66.25	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004650mg PE=4 SV=1	[more]
B9HQ44_POPTR	1.1e-181	66.32	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16140g PE=4 SV=1	[more]
A0A067F4M0_CITSI	1.9e-181	64.55	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010693mg PE=4 SV=1	[more]
V4SF13_9ROSI	2.4e-181	64.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028245mg PE=4 SV=1	[more]

BLAST of CmoCh13G003900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10230.1	5.4e-140	55.41	lycopene cyclase	[more]
AT5G57030.1	3.4e-73	40.35	Lycopene beta/epsilon cyclase protein	[more]

BLAST of CmoCh13G003900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108717\|ref\|XP_008454352.1\|	1.6e-226	80.04	PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Cucumis melo]	[more]
gi\|778689289\|ref\|XP_011652931.1\|	6.1e-226	80.04	PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Cucumis sativus]	[more]
gi\|595823631\|ref\|XP_007205102.1\|	6.4e-183	66.25	hypothetical protein PRUPE_ppa004650mg [Prunus persica]	[more]
gi\|743792086\|ref\|XP_011043447.1\|	1.9e-182	67.23	PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Populus euphratica]	[more]
gi\|645218134\|ref\|XP_008229097.1\|	9.2e-182	65.97	PREDICTED: capsanthin/capsorubin synthase, chromoplast-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010108	Lycopene_cyclase_b/e
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016117	carotenoid biosynthetic process
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009536	plastid
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016860	intramolecular oxidoreductase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0052727	capsanthin synthase activity
molecular_function	GO:0052728	capsorubin synthase activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003900.1	CmoCh13G003900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010108	Lycopene cyclase, beta/epsilon	TIGRFAMs	TIGR01790	TIGR01790	coord: 71..465 score: 2.3E
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 305..375 score: 2.7E-28coord: 68..214 score: 2.7
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 66..228 score: 1.35E-31coord: 327..452 score: 1.35
None	No IPR available	PANTHER	PTHR13789	MONOOXYGENASE	coord: 42..479 score: 5.1E
None	No IPR available	PANTHER	PTHR13789:SF203	SUBFAMILY NOT NAMED	coord: 42..479 score: 5.1E
None	No IPR available	PFAM	PF05834	Lycopene_cycl	coord: 71..462 score: 8.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G003900	CmaCh13G003600	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G003900	Cp4.1LG00g01770	Cucurbita pepo (Zucchini)	cmocpeB180
CmoCh13G003900	Carg26513	Silver-seed gourd	carcmoB1323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G003900	Cucumber (Chinese Long) v3	cmocucB0228
CmoCh13G003900	Cucurbita moschata (Rifu)	cmocmoB168
CmoCh13G003900	Cucurbita maxima (Rimu)	cmacmoB398
CmoCh13G003900	Melon (DHL92) v3.5.1	cmomeB182
CmoCh13G003900	Cucurbita pepo (Zucchini)	cmocpeB182