CmoCh13G003850 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G003850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NF-kappa-B inhibitor-like protein 2 isoform 1
Location	Cmo_Chr13 : 4867644 .. 4873542 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGCTTCCCGGAAAGATATTTTGGTTCCCACGATTGTGAAGCTCGGATAAGCCATGGAAACTCTTTCTATGGTTACATGCTTCACCTGCAAGCAGACTCCACCGCCAACCAGATTCCTATCTCGCACAGCTACAGCATTATCTCATTTGCAGAAATCAAAGCTCCATATTCCATTATCGCGAACAAGAATTCGGGCAGGTCTGTTCTCCCGTACTTCTTTTCACATTGTTAGCTTGATTTTCCTGTGGAACTGAGAAGAGCGTAATGACGCGATCCTAGAATCGAAGTTAGGAGTCATTTTTCGGAATTTCGGTTTGGTGATTTGATATTCTATCGATTCTGTCCAATTTGAAGCTGTTTGGTTTCTTCAATTGGCAGGTGATTATAATGGGGGAATTTGAAGTTTTTTCCACTGAAATTCAACAGCGTTTTGATAAGAAACTGAACGCTTTGTTCTTAACTCTGTATACGTAGAGATAGGGAATTAACAGGTAGTCTTACTTCTCCCATGTAACTCAGTTTTCATTGATCCCAACTTCAAGGACACTAGGATGTGAAAAGTAGATTATTCGTTTGAGTTGTTGACGCATTCTAACTTCTAAGCTACGTTTCCTGAAGGAATTGGCAATTTACTGTGGAAAGCCAAAGTTACTAAGTCCTATTCTTCAGAAAAGCCAATTTTCATGCGGTTCCTCTCCTTAGAAGAACCAATGGCTGAAGAATGATGTCAAGCTATTATGCGATCCCAGGATGACTCATGATATTTTTTTTTTAAGAATCAGAGAGATACTAGAAAATAGAGCTTAGAGAACTTGAATGATTTTTCCTGCATCTTCCTCCTTCATTCGAGTGGTAAATGCTCACTCACTCTCTCGCTGCGTGATTTCTTCACTTAGAGTTGTGAATCTAGTGAAAGTCGAAGGCTAAGAAGAATGTGTCAAAAGTTGAGATAACGTCTGGATACGATAATCAGACGATTCACCACAGAATAATAGAATAAGGAAAACCACTGTTGAATCAACTTGAGTTATCAAGTCAATAGTTATAATTAAGAACTAGGATAAGTAGGGTGGGTAGCAGCTAATATTTACTAATGCAGTAGGATTAGTGGTAAATTCATGTTAAGCTTAATTCTTAGTGGATTACTTTGTTAATGCCTTTAGTATCTGTTTTTATTTTTATACTCCCTTTAGACTAGAATCTCTCTCATGTATTCAATAGTATTTGATGCAAAGCCTTTGGTTTGAGGGTAACATTAGAACTTTCAATGATAAAGCAAAAAAGCATAGTTTGCTGCTTTGACAATGTTTATTTTGTAGGCTTCTCATGGTGTAAATTGTATCCTTCCTTCAATGGCTATCTGGAATGTTGTTTTTTTTTTTTTTTTGCTTTGAGCCTTTGTTTTTCTTCCTCTATTCGTAATTTGATAATTTAATACCATCTATGAAATTCATGTTTTCTTACTAAAAAAAGTATATCATTCTGTTAAATTTTCTTCAATTAATTTGATTTTGCAAACTATCTAATGGCCTTGAGTGCCTTTTTATACGTAACCTTTAATTCATGTTTTTAAAAAATAATTCAGTAATATTAATATGTTTTCTTGAAATATTCTTTATATATGAAAAGGATATTATTTGACTATTTTTTAATCAAGTAGGATACGATCAACTTCAAAAGTTTTGATATCATTAATATATAGCAATTGTTTTTTTTTATTTGTTCTTACAATAATATATTATAAAATTCATCATTCAGCCCTTTTCAAATTTTTGTAATGAAAAATATATTAATTTTCATGAAGTTATTGATTAAATTGCATGTTATCTATGCATAGATACTCATTAACTATTTATTAATAATTGTTTATATTAGATATAAGTACATAGTAATTTACTCGGCTATTTGAAACTTACAAAGATTTTGTCCTCTTCTTTGGGCTTTGTACTATTGACACAATGCTTGTGATTTTCCTTGCATTTTCATTAGTAGTTTCTTTACTACAAGTAGTTTATTATTGTTATTTTCTGGCAGCCTATTCCAATGCTTTTAACTTTAAGTTAGCTAACTAGCGCATGCTGATCTTCACATAGTGTCTTGTTTTTTCAGTAAGTGAAATTGCAGAAGAGGATGTTCTACAAGCATTCTTTGAGGAACGAAAACTAAATGCAGATTTTATATCAAAAACTTCTGATATGCTTTGGCAGAGGGAGGTCGTGAAATTCGAAGATGTGACTGATGACAGGTTTACTGATACTTCCCAAGAAGTACTGGTACAATATGCTTAGCATTTTTAATGCTTTCAGTTTCAATTTTCAATTTATGATAGCATTTCAATGCTTAGTGTTTATGATGTCAAAGGGAGGTCTGTGCATGATAGCCAGCCATTGGAAACTAAGAAATTAATATGTTTCTACAATATTTAAAGAACATATTTGTATCGTCACTTTGGTACCCTAGTAGCATTTTGTTACTCTAGCAGTATGATAGTAGATATCTTCCAACTTCGTATTAAGTAGATGAAACACAGGCTCAATCATTGTTATGTGAAGAAAATGATAAAAGTTGTGGCTATGCCCATCTAATTTTTCAGGAAGATGAACAAATAACACCAAAATGTTCTATGTAATAACACCATCTAATTTTTCAGGCTATGCCCATCTAATTGTTTGCAAACTTTTTGGCTATAGTAGAAGGAACAGACACTGAATGTGAGTTTCCACGTATGCTGTTGAAATCAGTTTTTTTATCTGCACCACATGTACTGTACATTACACTAAATTGATGAATTTCATGTAATTTTGAAATCTTTGTTAATTTTCTGAATACTAAACTGTATTTTGAATGGTTTTATCAATGCTTAAAATGCACCAAAACGGTGTTCTGCTTTTTTTTTTTTACCTTCTTCAGAGGATAGTGTAACCTCTTGTATTTTCCCCTTAATTCTTGATTTACAACTTGTAGGATGATGAAAACAATGATGGTGGTGGATTTTTGAAATTGTCCGCCACTCAAGCATGGGTCTCAGGTGGTACCTCTGCACCAATCAATAAAAAAGCTGGTGATAAGGTGTGCCTACTCCAGCTCTTATGTTATGAGTTATAGAATTCATTTTATATGTGGTTTCCATGAATCAGTTTAATTGCTCTGGATCAGTTGCCAGATAAGATCAGTCAATCACTTTCCTTAACTCTCTATTTTCTTTAACAGATACTGCCAGATGACCGTGAAAGAAGGAAGAAACTAAATTTTCTCAAATATGAAGCTGTATGATACTTGAACTCAGTATGTTCATTGGTTGTTTATGTAAGGTGGTAATACTTTTATGTCATCTAAGATCATCTTGATATAAAATTAATGTCTGCCCTTCAATCACTAAACTTGTCCAAAATCAAAATTTCCCATATTTTTCAAAGTTCGTACATAATATAAATGGGTCACCAAAAGAGTTGGGGCTGGATTGAATTGGGGCCTACAGAGGTAAGAGCCTCCCAAGGAATTGTTTTCATTTTTGAAACATAGGCGGTTGAATGGACCAAGTCTAGCATAAAAACATTTGGCCCAAACAACCCTTAAACCTATAGTTCGATTAGTTGGGCTGTACTGGCTAATTGGGCCATAAGCAGACCTTATAGTTTTATATTTTTAATAACTGATTTTAGGAAAAAATTATGAAATTATTATATGTTTACCTACAAGCTTAAATAAATTATTTTTTTAATGGAAATCAGTGATATATTAGTCATTAATAAATTCTTCGTAGATAATATTCATAATGCATTTTAACCTACTTTTTTTTTAAAGTTTCTATAGTAATTTGTTGAGCATGTAAACTTTCTGTGCTTGCACACTTATTGGTTTACAGATGCTTCCATTTTGTTTTCTTTTCAATTCGCATGGGCAGATGAAGTTTTGCTCCTTGCACTACTGTGACTTTGGCGTTGATTGTATGAGATGCTTTGAGTATAAAATTGATTTGATAAAGTGCTCCCTTATGTAATCTAGTTGCATTTAAAGCTTTTCTCCTTTTCCTTTTTCTTTTGTGGTAATTTACTTTTTGGCTACATCATGAAACTACAGAATAATTGGCTAAAAGTGATGGAAGATGAACCTTTGACCATTAAAGAATTTGGAAGTTGATCACTAATTCCCTTTTTAACACAGCTCAAGAGGGAACTGATGCTTTTGTCCGTTGGCATTGGAACTGCATGCAGTGGGTATTGCCTGATAGTGTTTTCGTTCCAGGTATATTCCAATTGAAGAAGAAAGGGCATTATCTTGTGTGCTACAGTAAATTTTTTGGTTGATTTACAGTTATTTTAGTACAAAGTAGAAGGAAGGATGCCATTATAGATTGGAGTCATTATATTATAATTTAGTTGCTATGTTACTTAGACTCCAGTATCTATTTCATTACATTTATTGGCCTGGATCATCTCATTTTCTTCAAGTGACACCTCACTTTTTCTTAACATGACTCATGAGTTGAGAGGAGCTTGCTTGCTGATGAAGGAATTTATTTGTTTTCCTGTTCAGGCTGCTATTAGTTATGCAGTAGGAGCCCTTTCGAGGTTAGTTGATATGAGTTTAATGTTGCTGTTATTTTGTAACTTCATTTTGGCATGCTGTGGTTCACTACCAAGAGTTAAGTTTTCATTCCAAGATTTGAAGTTTTCAAACAAGATCTTGGTCAGGATATAAGAATAAATATTAATTAACAAGACTCTTCCAAAACAATTTCTTGGAGAAGTTTGTAAGATTCAAAGTGACCTCTAGTCAAATCAGTTTTTGCCTCCTACGGAGGAAATTAAAAAAAAATATATCCGTTCTCAAATTGTGATTAGATTTCTATTGCACATTTATCAGAGAAACCTTGTTATTTTGTTGTAATTGTGCAATAACATCTGGGATTATCTCTAATGCAGCTGCTTATACCTCCAGCTATTATATCGACATGCTGACAAACTATCTAAAGACACGGTTCCCGATATCTTCACGCAGAAAAAGACGAAAAAGTATGGATAAATGCCATAGTCGGTCTATTTGTTTATTGAGTATAACTTGTTTGTCACAATCAACATTCATTCTTTGTGCCAGAATTGGAATAAGAAGTGAAGATATCCAGAACGTGTTTGAAAAATCAGTGAGGGGAAGTAGCATTGCTCTGTCATCTCCTAGGCTTTTGATTCCTGCTGCAATATATGCAATATGGATCCTCTCTCATAAATATCTTGCCAACGACTTCTTCGACTTCCAGGTAACAAATGACTATATGTGTGGACCATTTCATCGTTTTAACCAATTGAACTAGTTTCGAGTTGAAAAGTCTATTTATTTTAAATGCATGTAGCCCCGAAAATAACTCTCTTATGTTGTCATGTGATTCTCTTCCTGTGTTTAGCTCACGCCAGCCATGGTTGGGATGTTTGTCTATAAAGCAGCTGCACTTGTTCAAGTTTACAGGGACAATGAAAACCTGAAATTGGACTTTCCAGAAAATGATGGGGGCTCGGCATAACTGCGCCACGCTTTTCGACATCAACCAGCGACAAATGACCTGTCCATTTTATGTTTGAAGCAACTGCTGGTTGCAGGTCAGCGTTTTAACTCCCTTTCCTACACCATAACTGATATGGAGAATGATATGCAGACGTTCAGTAATTCAATCAAACACCATTGGGATTAAGTACTATGCCATTTCATGTTTTAGTGCACAAATGTTTGGCTGCTTAGTGAAGAGAAGAATTAAAGTGCCCTGTTTCTGCCATTACTGAACCCCAGTTGTTGGTCGAGTCGGTTTTAGCTAGGCCAGGGATTGATATGTTATTTATGAGTTATATGATTGAACTTTTTCTAAGATTTATTTTGGCAATCATCAGATTACAGCAATGACCATTG

mRNA sequence

AATGCTTCCCGGAAAGATATTTTGGTTCCCACGATTGTGAAGCTCGGATAAGCCATGGAAACTCTTTCTATGGTTACATGCTTCACCTGCAAGCAGACTCCACCGCCAACCAGATTCCTATCTCGCACAGCTACAGCATTATCTCATTTGCAGAAATCAAAGCTCCATATTCCATTATCGCGAACAAGAATTCGGGCAGTAAGTGAAATTGCAGAAGAGGATGTTCTACAAGCATTCTTTGAGGAACGAAAACTAAATGCAGATTTTATATCAAAAACTTCTGATATGCTTTGGCAGAGGGAGGTCGTGAAATTCGAAGATGTGACTGATGACAGGTTTACTGATACTTCCCAAGAAGTACTGGATGATGAAAACAATGATGGTGGTGGATTTTTGAAATTGTCCGCCACTCAAGCATGGGTCTCAGGTGGTACCTCTGCACCAATCAATAAAAAAGCTGGTGATAAGATACTGCCAGATGACCGTGAAAGAAGGAAGAAACTAAATTTTCTCAAATATGAAGCTCTCAAGAGGGAACTGATGCTTTTGTCCGTTGGCATTGGAACTGCATGCAGTGGGTATTGCCTGATAGTGTTTTCGTTCCAGACTCCAGTATCTATTTCATTACATTTATTGGCCTGGATCATCTCATTTTCTTCAAGTGACACCTCACTTTTTCTTAACATGACTCATGAGTTGAGAGGAGCTTGCTTGCTGATGAAGGAATTTATTTGTTTTCCTGTTCAGGCTGCTATTAGTTATGCAGTAGGAGCCCTTTCGAGCTGCTTATACCTCCAGCTATTATATCGACATGCTGACAAACTATCTAAAGACACGGTTCCCGATATCTTCACGCAGAAAAAGACGAAAAAAATTGGAATAAGAAGTGAAGATATCCAGAACGTGTTTGAAAAATCAGTGAGGGGAAGTAGCATTGCTCTGTCATCTCCTAGGCTTTTGATTCCTGCTGCAATATATGCAATATGGATCCTCTCTCATAAATATCTTGCCAACGACTTCTTCGACTTCCAGCTCACGCCAGCCATGGTTGGGATGTTTGTCTATAAAGCAGCTGCACTTGTTCAAGTTTACAGGGACAATGAAAACCTGAAATTGGACTTTCCAGAAAATGATGGGGGCTCGGCATAACTGCGCCACGCTTTTCGACATCAACCAGCGACAAATGACCTGTCCATTTTATGTTTGAAGCAACTGCTGGTTGCAGGTCAGCGTTTTAACTCCCTTTCCTACACCATAACTGATATGGAGAATGATATGCAGACGTTCAGTAATTCAATCAAACACCATTGGGATTAAGTACTATGCCATTTCATGTTTTAGTGCACAAATGTTTGGCTGCTTAGTGAAGAGAAGAATTAAAGTGCCCTGTTTCTGCCATTACTGAACCCCAGTTGTTGGTCGAGTCGGTTTTAGCTAGGCCAGGGATTGATATGTTATTTATGAGTTATATGATTGAACTTTTTCTAAGATTTATTTTGGCAATCATCAGATTACAGCAATGACCATTG

Coding sequence (CDS)

ATGGAAACTCTTTCTATGGTTACATGCTTCACCTGCAAGCAGACTCCACCGCCAACCAGATTCCTATCTCGCACAGCTACAGCATTATCTCATTTGCAGAAATCAAAGCTCCATATTCCATTATCGCGAACAAGAATTCGGGCAGTAAGTGAAATTGCAGAAGAGGATGTTCTACAAGCATTCTTTGAGGAACGAAAACTAAATGCAGATTTTATATCAAAAACTTCTGATATGCTTTGGCAGAGGGAGGTCGTGAAATTCGAAGATGTGACTGATGACAGGTTTACTGATACTTCCCAAGAAGTACTGGATGATGAAAACAATGATGGTGGTGGATTTTTGAAATTGTCCGCCACTCAAGCATGGGTCTCAGGTGGTACCTCTGCACCAATCAATAAAAAAGCTGGTGATAAGATACTGCCAGATGACCGTGAAAGAAGGAAGAAACTAAATTTTCTCAAATATGAAGCTCTCAAGAGGGAACTGATGCTTTTGTCCGTTGGCATTGGAACTGCATGCAGTGGGTATTGCCTGATAGTGTTTTCGTTCCAGACTCCAGTATCTATTTCATTACATTTATTGGCCTGGATCATCTCATTTTCTTCAAGTGACACCTCACTTTTTCTTAACATGACTCATGAGTTGAGAGGAGCTTGCTTGCTGATGAAGGAATTTATTTGTTTTCCTGTTCAGGCTGCTATTAGTTATGCAGTAGGAGCCCTTTCGAGCTGCTTATACCTCCAGCTATTATATCGACATGCTGACAAACTATCTAAAGACACGGTTCCCGATATCTTCACGCAGAAAAAGACGAAAAAAATTGGAATAAGAAGTGAAGATATCCAGAACGTGTTTGAAAAATCAGTGAGGGGAAGTAGCATTGCTCTGTCATCTCCTAGGCTTTTGATTCCTGCTGCAATATATGCAATATGGATCCTCTCTCATAAATATCTTGCCAACGACTTCTTCGACTTCCAGCTCACGCCAGCCATGGTTGGGATGTTTGTCTATAAAGCAGCTGCACTTGTTCAAGTTTACAGGGACAATGAAAACCTGAAATTGGACTTTCCAGAAAATGATGGGGGCTCGGCATAA

Homology

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BLAST of CmoCh13G003850 vs. TrEMBL
Match: A0A0D2TLU8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G084000 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74
Identity = 178/363 (49.04%), Postives = 221/363 (60.88%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           M+TLS     T   T   TRF          L +    + + +T   +VSE  EE+VL+ 
Sbjct: 23  MDTLSGFAFITNCNTSSCTRFSLLPPHQRPPLSRRNPTVYVLKTSSSSVSESVEENVLEM 82

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDT---SQEVLDDENNDGGGFLKLS 120
           FF++R++N DF+SK SDMLWQREV+K  D        T   SQ+V+  E++D  GFLKLS
Sbjct: 83  FFKDREVNGDFVSKVSDMLWQREVLKVVDTDASEPAGTAEQSQQVI--ESDDDSGFLKLS 142

Query: 121 ATQAWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYC 180
            TQ W+ G  SAP NKKA  K+L DD ERRKKLN LKYEALKREL LLSVGIGTACSGYC
Sbjct: 143 RTQEWLLGDNSAPRNKKAIAKVLQDDGERRKKLNLLKYEALKRELTLLSVGIGTACSGYC 202

Query: 181 LIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQAAISYA 240
           LIV SFQ  VS ++ +L                              F C  +Q    +A
Sbjct: 203 LIVLSFQAAVSYAIGVL------------------------------FSCLYLQLLYQHA 262

Query: 241 VGALSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRGSSIALS 300
            G LS  +  Q+  +   K                 IGIRSED+Q+ FE++++GS IALS
Sbjct: 263 DG-LSEEMVPQIFKQKKSKK----------------IGIRSEDLQDFFERTIKGSGIALS 322

Query: 301 SPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNENLKLDFP 360
           SPRL+IPAA+Y +WI+SHK+LANDFFDFQL PAM+GMF YKAAALVQVYRDNE+L+  FP
Sbjct: 323 SPRLVIPAAVYGLWIVSHKFLANDFFDFQLVPAMLGMFAYKAAALVQVYRDNEDLQFVFP 336

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BLAST of CmoCh13G003850 vs. TrEMBL
Match: A0A0A0LVU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166810 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.8e-73
Identity = 152/195 (77.95%), Postives = 167/195 (85.64%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           METLSMVTCFT KQ  PP+RFLSRT T+L H QKSK         IRAVSEIAEEDVLQA
Sbjct: 1   METLSMVTCFTGKQITPPSRFLSRTFTSLPHFQKSK--------PIRAVSEIAEEDVLQA 60

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTSQEVLDDENNDGGGFLKLSATQ 120
           FFEERKLN+DFISKTSDMLWQR V+KFEDVTDDRF DTSQ ++DD N+D GGFLKLS TQ
Sbjct: 61  FFEERKLNSDFISKTSDMLWQRAVLKFEDVTDDRFMDTSQGLVDD-NDDDGGFLKLSVTQ 120

Query: 121 AWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180
            W+SGG SAPINKKAG+KIL DDRER+KKLNFLKYEALKRELMLLSVGIGTACSGYCLIV
Sbjct: 121 KWISGGNSAPINKKAGNKILSDDRERKKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180

Query: 181 FSFQTPVSISLHLLA 196
           FSFQ  +S ++ +L+
Sbjct: 181 FSFQAAISYAVGVLS 186

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BLAST of CmoCh13G003850 vs. TrEMBL
Match: W9RQ38_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016308 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71
Identity = 171/365 (46.85%), Postives = 214/365 (58.63%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           M+TL    CFT      P                S+    L RT +R V EI+EEDVLQ 
Sbjct: 1   MDTLQRFGCFTTSIIKSPLPKPLSVPRQWKPTPTSQPSFWLPRTSLRPVGEISEEDVLQT 60

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTSQ---EVLDDENNDGGGFLKLS 120
           F  ER+LN DFISK SDM WQRE +KF D  +   +DTS+   +V++ +N+  GGFLKL+
Sbjct: 61  FLTERQLNGDFISKVSDMFWQREAMKFVD-AEAALSDTSRQADQVIESDND--GGFLKLT 120

Query: 121 ATQAWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYC 180
            TQ WVSG TSAPINKKAG K L DDRERR++LN LKYEALKREL LLS+GIGTAC+GYC
Sbjct: 121 RTQEWVSGDTSAPINKKAGAKALQDDRERRRRLNLLKYEALKRELWLLSIGIGTACTGYC 180

Query: 181 LIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQAAISYA 240
           L+V S Q  +S +  +L                              F C  +Q    +A
Sbjct: 181 LVVLSVQAAISYATGVL------------------------------FSCLYLQLLYRHA 240

Query: 241 VGALSSCLYLQLLYRHADKLS--KDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRGSSIA 300
                  +      + A K+    + V D+F                    +S++GS IA
Sbjct: 241 DNISRDAVPQIFRQKKAKKIGIRSEDVRDMFE-------------------RSIKGSGIA 300

Query: 301 LSSPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNENLKLD 360
           +SSPRL+IPAAIY +WILSH+YL+NDFFDFQ+ PAM+GMFVYKAAALVQVYRDNE+L+  
Sbjct: 301 VSSPRLVIPAAIYGLWILSHQYLSNDFFDFQMVPAMLGMFVYKAAALVQVYRDNEDLQFI 313

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BLAST of CmoCh13G003850 vs. TrEMBL
Match: V4LID8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014124mg PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.8e-65
Identity = 160/368 (43.48%), Postives = 212/368 (57.61%), Query Frame = 1


Query: 1   METLSMVTC--FTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVL 60
           METLS+     F+     PP   LS          ++   +P      R+VSE+ EEDVL
Sbjct: 1   METLSIPAAAWFSGGAIHPPHARLSLPYLLRKPPNRNAPRLPALNAASRSVSELVEEDVL 60

Query: 61  QAFFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTS------QEVLDDENNDGGG 120
           Q F ++R+ N DFISK SD LW RE+++  D+  D  + T+      + ++   ++D  G
Sbjct: 61  QMFLKDREENGDFISKVSDRLWFREILESIDLNSDGASSTTGLDNNQESLMYGADDDESG 120

Query: 121 FLKLSATQAWVSGGT-SAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGT 180
           FLKL  TQ W+ G + SAP+N+KA  K L DD ERRKKLNFLKYEALKRELM LS+ IGT
Sbjct: 121 FLKLKPTQEWIVGESDSAPMNRKALAKALRDDSERRKKLNFLKYEALKRELMYLSIVIGT 180

Query: 181 ACSGYCLIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQ 240
            CSGYCL+  S Q  VS ++ +L                              F C  +Q
Sbjct: 181 GCSGYCLLALSPQAAVSYAVGVL------------------------------FSCLYLQ 240

Query: 241 AAISYAVGALSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRG 300
               YA G     +    L +   K+                 GIRSED+++  E+++RG
Sbjct: 241 LLYGYADGVSREAVPNIFLKKKTKKI-----------------GIRSEDLEDFVERTIRG 300

Query: 301 SSIALSSPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNEN 360
           S +ALSSPRL+IPAA+YA+W+LSHKYL ND FDFQ+ PAMVG+FVYKAAALVQVYRDN++
Sbjct: 301 SGMALSSPRLVIPAAVYALWLLSHKYLQNDLFDFQIVPAMVGLFVYKAAALVQVYRDNQD 321

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BLAST of CmoCh13G003850 vs. TrEMBL
Match: Q84TE7_ARATH (At5g22340 OS=Arabidopsis thaliana GN=At5g22340 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.0e-63
Identity = 147/321 (45.79%), Postives = 191/321 (59.50%), Query Frame = 1


Query: 47  RAVSEIAEEDVLQAFFEERKLNADFISKTSDMLWQREVVKFEDVTDD-------RFTDTS 106
           R+VSE+ EEDVLQ F ++R+ N DFISK SD LW +E+++  DV  +          DT 
Sbjct: 49  RSVSELVEEDVLQMFMKDREENGDFISKVSDRLWLKEILESIDVNSNGASSSAVELDDTR 108

Query: 107 QEVLDDENNDGGGFLKLSATQAWVSGGT-SAPINKKAGDKILPDDRERRKKLNFLKYEAL 166
           + ++D  ++D  GFLKL  TQ W+   + SAP+NKKA  K L DD ERRKK NFLKYEAL
Sbjct: 109 ESLIDGADDDESGFLKLKPTQEWIGWESDSAPMNKKALAKALRDDSERRKKFNFLKYEAL 168

Query: 167 KRELMLLSVGIGTACSGYCLIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGA 226
           KRELM LS+ IGT CSGYCL+  S Q  VS ++ +L                        
Sbjct: 169 KRELMYLSIVIGTGCSGYCLLALSVQAAVSYAVGVL------------------------ 228

Query: 227 CLLMKEFICFPVQAAISYAVGALSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRS 286
                 F C  +Q    YA G     +    L + + K+                 GIRS
Sbjct: 229 ------FSCLYLQLLYGYADGLSREAVPDIFLKKKSKKI-----------------GIRS 288

Query: 287 EDIQNVFEKSVRGSSIALSSPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYK 346
           ED+++   +++RGS +ALSSPRL+IPAAIY +WILSHKY  ND FDFQ+ PAMVG+FVYK
Sbjct: 289 EDLEDFVVRTIRGSGMALSSPRLVIPAAIYGLWILSHKYFQNDLFDFQIVPAMVGLFVYK 322

Query: 347 AAALVQVYRDNENLKLDFPEN 360
           AA LVQVYRDN++L+  FP++
Sbjct: 349 AATLVQVYRDNQDLQFIFPDD 322

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BLAST of CmoCh13G003850 vs. TAIR10
Match: AT5G22340.2 (AT5G22340.2 unknown protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-52
Identity = 126/297 (42.42%), Postives = 166/297 (55.89%), Query Frame = 1


Query: 47  RAVSEIAEEDVLQAFFEERKLNADFISKTSDMLWQREVVKFEDVTDD-------RFTDTS 106
           R+VSE+ EEDVLQ F ++R+ N DFISK SD LW +E+++  DV  +          DT 
Sbjct: 49  RSVSELVEEDVLQMFMKDREENGDFISKVSDRLWLKEILESIDVNSNGASSSAVELDDTR 108

Query: 107 QEVLDDENNDGGGFLKLSATQAWVSGGT-SAPINKKAGDKILPDDRERRKKLNFLKYEAL 166
           + ++D  ++D  GFLKL  TQ W+   + SAP+NKKA  K L DD ERRKK NFLKYEAL
Sbjct: 109 ESLIDGADDDESGFLKLKPTQEWIGWESDSAPMNKKALAKALRDDSERRKKFNFLKYEAL 168

Query: 167 KRELMLLSVGIGTACSGYCLIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGA 226
           KRELM LS+ IGT CSGYCL+  S Q  VS ++ +L                        
Sbjct: 169 KRELMYLSIVIGTGCSGYCLLALSVQAAVSYAVGVL------------------------ 228

Query: 227 CLLMKEFICFPVQAAISYAVGALSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRS 286
                 F C  +Q    YA G     +    L + + K+                 GIRS
Sbjct: 229 ------FSCLYLQLLYGYADGLSREAVPDIFLKKKSKKI-----------------GIRS 288

Query: 287 EDIQNVFEKSVRGSSIALSSPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMF 336
           ED+++   +++RGS +ALSSPRL+IPAAIY +WILSHKY  ND FDFQ    +V ++
Sbjct: 289 EDLEDFVVRTIRGSGMALSSPRLVIPAAIYGLWILSHKYFQNDLFDFQFQQWLVCLY 298

[Close]

BLAST of CmoCh13G003850 vs. NCBI nr
Match: gi|659127344|ref|XP_008463653.1| (PREDICTED: uncharacterized protein LOC103501748 isoform X1 [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-107
Identity = 232/364 (63.74%), Postives = 263/364 (72.25%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           METLSM+TCFT KQ  PP+RFLSRT T+L H QKSK         IRAVS+IAEEDVLQA
Sbjct: 1   METLSMLTCFTGKQITPPSRFLSRTFTSLPHFQKSK--------PIRAVSDIAEEDVLQA 60

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTSQEVLDDENNDGGGFLKLSATQ 120
           FFEERKL +DFISKTSDMLWQR V+KFEDVTDDRF  TSQE L D+N+D GGFLKLS TQ
Sbjct: 61  FFEERKLKSDFISKTSDMLWQRAVLKFEDVTDDRFMYTSQEGLVDDNDDDGGFLKLSVTQ 120

Query: 121 AWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180
            W+SGG SAPINK              K +N +  +  +R+  L  +     C   CL  
Sbjct: 121 EWISGGNSAPINK--------------KAVNKILSDDRERKKKLNFLKYEAVC---CL-- 180

Query: 181 FSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQAAISYAVGA 240
                 +   L LL+  I  + S             G CL++     F  QAAISYAVG 
Sbjct: 181 ----NTLKRELMLLSVGIGTACS-------------GYCLIV-----FSFQAAISYAVGV 240

Query: 241 LSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRGSSIALSSPR 300
           LSSCLYLQLLY+HADKLSKD +PDIF+QKKTKKIGIRSEDI+NVFEKSV+GS IALSSPR
Sbjct: 241 LSSCLYLQLLYQHADKLSKDMIPDIFSQKKTKKIGIRSEDIKNVFEKSVKGSGIALSSPR 300

Query: 301 LLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNENLKLDFPEND 360
           L+IPAAIYA+WILSHK+LANDFFDFQLTPAM+GM VYKAAALVQVYRDN+NL+L FPEND
Sbjct: 301 LMIPAAIYALWILSHKFLANDFFDFQLTPAMLGMLVYKAAALVQVYRDNDNLRLVFPEND 315

Query: 361 GGSA 365
           G SA
Sbjct: 361 GDSA 315

[Close]

BLAST of CmoCh13G003850 vs. NCBI nr
Match: gi|659127348|ref|XP_008463655.1| (PREDICTED: uncharacterized protein LOC103501748 isoform X2 [Cucumis melo])

HSP 1 Score: 377.1 bits (967), Expect = 3.5e-101
Identity = 220/364 (60.44%), Postives = 256/364 (70.33%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           METLSM+TCFT KQ  PP+RFLSRT T+L H QKSK         IRAVS+IAEEDVLQA
Sbjct: 1   METLSMLTCFTGKQITPPSRFLSRTFTSLPHFQKSK--------PIRAVSDIAEEDVLQA 60

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTSQEVLDDENNDGGGFLKLSATQ 120
           FFEERKL +DFISKTSDMLWQR V+KFEDVTDDRF  TSQE L D+N+D GGFLKLS TQ
Sbjct: 61  FFEERKLKSDFISKTSDMLWQRAVLKFEDVTDDRFMYTSQEGLVDDNDDDGGFLKLSVTQ 120

Query: 121 AWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180
            W+SGG SAPINKKA +KIL DDRER+KKLNFLKYEALKRELMLLSVGIGTACSGYCLIV
Sbjct: 121 EWISGGNSAPINKKAVNKILSDDRERKKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180

Query: 181 FSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQAAISYAVGA 240
           FSFQ  +S ++ +L+         + L+L + ++   A  L K+ I        +  +G 
Sbjct: 181 FSFQAAISYAVGVLS---------SCLYLQLLYQ--HADKLSKDMIPDIFSQKKTKKIG- 240

Query: 241 LSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRGSSIALSSPR 300
                           +  + + ++F +K  K  GI                   LSSPR
Sbjct: 241 ----------------IRSEDIKNVF-EKSVKGSGIA------------------LSSPR 300

Query: 301 LLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNENLKLDFPEND 360
           L+IPAAIYA+WILSHK+LANDFFDFQLTPAM+GM VYKAAALVQVYRDN+NL+L FPEND
Sbjct: 301 LMIPAAIYALWILSHKFLANDFFDFQLTPAMLGMLVYKAAALVQVYRDNDNLRLVFPEND 309

Query: 361 GGSA 365
           G SA
Sbjct: 361 GDSA 309

[Close]

BLAST of CmoCh13G003850 vs. NCBI nr
Match: gi|823228892|ref|XP_012447192.1| (PREDICTED: uncharacterized protein LOC105770515 isoform X1 [Gossypium raimondii])

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74
Identity = 178/363 (49.04%), Postives = 221/363 (60.88%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           M+TLS     T   T   TRF          L +    + + +T   +VSE  EE+VL+ 
Sbjct: 23  MDTLSGFAFITNCNTSSCTRFSLLPPHQRPPLSRRNPTVYVLKTSSSSVSESVEENVLEM 82

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDT---SQEVLDDENNDGGGFLKLS 120
           FF++R++N DF+SK SDMLWQREV+K  D        T   SQ+V+  E++D  GFLKLS
Sbjct: 83  FFKDREVNGDFVSKVSDMLWQREVLKVVDTDASEPAGTAEQSQQVI--ESDDDSGFLKLS 142

Query: 121 ATQAWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYC 180
            TQ W+ G  SAP NKKA  K+L DD ERRKKLN LKYEALKREL LLSVGIGTACSGYC
Sbjct: 143 RTQEWLLGDNSAPRNKKAIAKVLQDDGERRKKLNLLKYEALKRELTLLSVGIGTACSGYC 202

Query: 181 LIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQAAISYA 240
           LIV SFQ  VS ++ +L                              F C  +Q    +A
Sbjct: 203 LIVLSFQAAVSYAIGVL------------------------------FSCLYLQLLYQHA 262

Query: 241 VGALSSCLYLQLLYRHADKLSKDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRGSSIALS 300
            G LS  +  Q+  +   K                 IGIRSED+Q+ FE++++GS IALS
Sbjct: 263 DG-LSEEMVPQIFKQKKSKK----------------IGIRSEDLQDFFERTIKGSGIALS 322

Query: 301 SPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNENLKLDFP 360
           SPRL+IPAA+Y +WI+SHK+LANDFFDFQL PAM+GMF YKAAALVQVYRDNE+L+  FP
Sbjct: 323 SPRLVIPAAVYGLWIVSHKFLANDFFDFQLVPAMLGMFAYKAAALVQVYRDNEDLQFVFP 336

[Close]

BLAST of CmoCh13G003850 vs. NCBI nr
Match: gi|449443462|ref|XP_004139496.1| (PREDICTED: uncharacterized protein LOC101208386 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 6.8e-73
Identity = 152/195 (77.95%), Postives = 167/195 (85.64%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           METLSMVTCFT KQ  PP+RFLSRT T+L H QKSK         IRAVSEIAEEDVLQA
Sbjct: 1   METLSMVTCFTGKQITPPSRFLSRTFTSLPHFQKSK--------PIRAVSEIAEEDVLQA 60

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTSQEVLDDENNDGGGFLKLSATQ 120
           FFEERKLN+DFISKTSDMLWQR V+KFEDVTDDRF DTSQ ++DD N+D GGFLKLS TQ
Sbjct: 61  FFEERKLNSDFISKTSDMLWQRAVLKFEDVTDDRFMDTSQGLVDD-NDDDGGFLKLSVTQ 120

Query: 121 AWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180
            W+SGG SAPINKKAG+KIL DDRER+KKLNFLKYEALKRELMLLSVGIGTACSGYCLIV
Sbjct: 121 KWISGGNSAPINKKAGNKILSDDRERKKKLNFLKYEALKRELMLLSVGIGTACSGYCLIV 180

Query: 181 FSFQTPVSISLHLLA 196
           FSFQ  +S ++ +L+
Sbjct: 181 FSFQAAISYAVGVLS 186

[Close]

BLAST of CmoCh13G003850 vs. NCBI nr
Match: gi|703120072|ref|XP_010102018.1| (hypothetical protein L484_016308 [Morus notabilis])

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 171/365 (46.85%), Postives = 214/365 (58.63%), Query Frame = 1


Query: 1   METLSMVTCFTCKQTPPPTRFLSRTATALSHLQKSKLHIPLSRTRIRAVSEIAEEDVLQA 60
           M+TL    CFT      P                S+    L RT +R V EI+EEDVLQ 
Sbjct: 1   MDTLQRFGCFTTSIIKSPLPKPLSVPRQWKPTPTSQPSFWLPRTSLRPVGEISEEDVLQT 60

Query: 61  FFEERKLNADFISKTSDMLWQREVVKFEDVTDDRFTDTSQ---EVLDDENNDGGGFLKLS 120
           F  ER+LN DFISK SDM WQRE +KF D  +   +DTS+   +V++ +N+  GGFLKL+
Sbjct: 61  FLTERQLNGDFISKVSDMFWQREAMKFVD-AEAALSDTSRQADQVIESDND--GGFLKLT 120

Query: 121 ATQAWVSGGTSAPINKKAGDKILPDDRERRKKLNFLKYEALKRELMLLSVGIGTACSGYC 180
            TQ WVSG TSAPINKKAG K L DDRERR++LN LKYEALKREL LLS+GIGTAC+GYC
Sbjct: 121 RTQEWVSGDTSAPINKKAGAKALQDDRERRRRLNLLKYEALKRELWLLSIGIGTACTGYC 180

Query: 181 LIVFSFQTPVSISLHLLAWIISFSSSDTSLFLNMTHELRGACLLMKEFICFPVQAAISYA 240
           L+V S Q  +S +  +L                              F C  +Q    +A
Sbjct: 181 LVVLSVQAAISYATGVL------------------------------FSCLYLQLLYRHA 240

Query: 241 VGALSSCLYLQLLYRHADKLS--KDTVPDIFTQKKTKKIGIRSEDIQNVFEKSVRGSSIA 300
                  +      + A K+    + V D+F                    +S++GS IA
Sbjct: 241 DNISRDAVPQIFRQKKAKKIGIRSEDVRDMFE-------------------RSIKGSGIA 300

Query: 301 LSSPRLLIPAAIYAIWILSHKYLANDFFDFQLTPAMVGMFVYKAAALVQVYRDNENLKLD 360
           +SSPRL+IPAAIY +WILSH+YL+NDFFDFQ+ PAM+GMFVYKAAALVQVYRDNE+L+  
Sbjct: 301 VSSPRLVIPAAIYGLWILSHQYLSNDFFDFQMVPAMLGMFVYKAAALVQVYRDNEDLQFI 313

The following BLAST results are available for this feature:

BLAST of CmoCh13G003850 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G003850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2TLU8_GOSRA	1.9e-74	49.04	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G084000 PE=4 SV=1	[more]
A0A0A0LVU8_CUCSA	4.8e-73	77.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166810 PE=4 SV=1	[more]
W9RQ38_9ROSA	2.0e-71	46.85	Uncharacterized protein OS=Morus notabilis GN=L484_016308 PE=4 SV=1	[more]
V4LID8_EUTSA	4.8e-65	43.48	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014124mg PE=4 SV=1	[more]
Q84TE7_ARATH	2.0e-63	45.79	At5g22340 OS=Arabidopsis thaliana GN=At5g22340 PE=2 SV=1	[more]

BLAST of CmoCh13G003850 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22340.2	1.4e-52	42.42	unknown protein	[more]

BLAST of CmoCh13G003850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127344\|ref\|XP_008463653.1\|	1.9e-107	63.74	PREDICTED: uncharacterized protein LOC103501748 isoform X1 [Cucumis melo]	[more]
gi\|659127348\|ref\|XP_008463655.1\|	3.5e-101	60.44	PREDICTED: uncharacterized protein LOC103501748 isoform X2 [Cucumis melo]	[more]
gi\|823228892\|ref\|XP_012447192.1\|	2.8e-74	49.04	PREDICTED: uncharacterized protein LOC105770515 isoform X1 [Gossypium raimondii]	[more]
gi\|449443462\|ref\|XP_004139496.1\|	6.8e-73	77.95	PREDICTED: uncharacterized protein LOC101208386 [Cucumis sativus]	[more]
gi\|703120072\|ref\|XP_010102018.1\|	2.9e-71	46.85	hypothetical protein L484_016308 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0009987	cellular process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003850.1	CmoCh13G003850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34118	FAMILY NOT NAMED	coord: 230..364 score: 2.7E-106coord: 19..182 score: 2.7E
None	No IPR available	PANTHER	PTHR34118:SF1	SUBFAMILY NOT NAMED	coord: 230..364 score: 2.7E-106coord: 19..182 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G003850	Cucsa.319750	Cucumber (Gy14) v1	cgycmoB0880
CmoCh13G003850	CmaCh13G003560	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G003850	Csa1G166810	Cucumber (Chinese Long) v2	cmocuB206
CmoCh13G003850	MELO3C025590	Melon (DHL92) v3.5.1	cmomeB182
CmoCh13G003850	ClCG01G011810	Watermelon (Charleston Gray)	cmowcgB171
CmoCh13G003850	CSPI01G14930	Wild cucumber (PI 183967)	cmocpiB208
CmoCh13G003850	Cp4.1LG00g01730	Cucurbita pepo (Zucchini)	cmocpeB180
CmoCh13G003850	MELO3C025590.2	Melon (DHL92) v3.6.1	cmomedB209
CmoCh13G003850	Cla97C01G011380	Watermelon (97103) v2	cmowmbB192
CmoCh13G003850	Bhi08G000027	Wax gourd	cmowgoB0254
CmoCh13G003850	CsGy1G014740	Cucumber (Gy14) v2	cgybcmoB072
CmoCh13G003850	Carg26507	Silver-seed gourd	carcmoB1323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G003850	Cucurbita maxima (Rimu)	cmacmoB398
CmoCh13G003850	Cucurbita maxima (Rimu)	cmacmoB395
CmoCh13G003850	Bottle gourd (USVL1VR-Ls)	cmolsiB194
CmoCh13G003850	Cucumber (Chinese Long) v3	cmocucB0239
CmoCh13G003850	Cucurbita moschata (Rifu)	cmocmoB168