CmoCh13G003780 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G003780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Short-chain dehydrogenase/reductase
Location	Cmo_Chr13 : 4828291 .. 4830076 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCATTCTTTTATATAAAGCTTTCATAGCATTTGGCCAATAACAACAAAGTAGAAAGAAAGAGAAGCAGAACAACCAGCAGCCATGAGCGTCTCTTTGCTTCCCACCGCTGCAAGAAGGTAACCTTATTTTCTCTCAAAACCTAATCTCGGCCACATCGACATGATTCAATTCAAGTCGTATTCGTTTTATTTTTTCTTTTTGTCGCCTCATACCAATGGAGATAACCTACGTGAGACAAGTCCCGGCTCGACTCACAATTTTTTATTTGATATCGGAGAATTCTATTGACATGGCTAAGTTTAGGACATGACTCTGATACCATGTTAGAAATCACGACTCTCCATAATGGTATGATATTGTCTACTTTGAATATAAGCGGTTCGATATTTGAGGATTTTATTGACATGGCTAAGTTTAGAACATGACTCTGGTACCATGTTAGAAATCACGACTCTCCATAGTAGTATGATATTGTCCACTTTGAGTATAAGTGCTCGTGGCTTTGTTTTGGGCTTCCCCAAGAGGCCTCATACGAACGAAGATAGTATTCCTCAATTATAAATCCATGATCTTCCACTCAATTAACGAACGTGAGACCCACTCCCAATAATCCTTAACAATCCTCGACCGACCATTAAGATTTTTTTTATAATTTTTTAATAAATATTATATTTTTTTAAAAAGGAATAACAAACTAGAATGGATGGATATTTGTTTTCATTGAAAAATTACTTACAACAATACAATCATTTGATTAGGCTAGAAGGCAAAGTGGCCGTAATCTTGGGCGCAGCCAGAGGAATTGGGGAGTCCACAGCAAGAACCTTCTTTAAGCATGGAGCAAAACTCGTGATTGCAGACATCCTAGACGATGTCGGTCACTCTCTTTCCAACCATCTCTGTTCTTCGTCATCTTCATTCGTCCACTGCGACGTAACGAAAGAGAAAGACGTTGAAAATGCGGTTAACACAGCCATTTCCAAGTACGGAAAGTTGGACATCATGTTGAACAACGCAGGCATTCTTGGAAATCCTATATTCAACATTCTTGAAAACGAATCATCTGACTTTCAAAAGGTACTCAACGTCAACTTACTTGGGACGTTTTTGGGCACCAAGCATGCAGCAAGGGCAATGATTCCAGCTCGTCAAGGTAGCATAATCATGACGGCAAGTGTTTGCTCGGCAATTGGTGGGATTGGGCCATATGGGTACACGAGCTCAAAGCATGGCGTGTTGGGATTGATGAAGAATGCAACGGTTGATTTAGGACGATATGGGATAAGGGTTAATTGTGTGTCGCCCCATGTGGTGCCCTCAGACATAACTAGAGAGCTGTTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATGTGGAGATATCTTAAGAGCAGAAGATATAGCTGAAGCCGCTTTGTATTTAGCAAGTGATGCATCACGGTTCGTAAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTGCAGCAAACCAAGGTTTTTGCTCCTATCAACAATCTGATGACTAAAAAAGGTTGAAACGAAGAACTACTTGTTTCAGACTTTTGGTTATTTGCTAAAGTTTTATCATGAATTTTCTTCCCAAGTTTTAATTTTGTGCTTTGTGTTTCAGTTAAACTATCATCAGTTATGTTTGTTGCGTCTTTCTCGTGTTTAAAATTATTATAAGAATATGAATTATAATAATAATAATGTAATTTGGTTCTTGATATAATATTTTATATTAGCTCACACAAATCAATAGACA

mRNA sequence

AGCATTCTTTTATATAAAGCTTTCATAGCATTTGGCCAATAACAACAAAGTAGAAAGAAAGAGAAGCAGAACAACCAGCAGCCATGAGCGTCTCTTTGCTTCCCACCGCTGCAAGAAGGCTAGAAGGCAAAGTGGCCGTAATCTTGGGCGCAGCCAGAGGAATTGGGGAGTCCACAGCAAGAACCTTCTTTAAGCATGGAGCAAAACTCGTGATTGCAGACATCCTAGACGATGTCGGTCACTCTCTTTCCAACCATCTCTGTTCTTCGTCATCTTCATTCGTCCACTGCGACGTAACGAAAGAGAAAGACGTTGAAAATGCGGTTAACACAGCCATTTCCAAGTACGGAAAGTTGGACATCATGTTGAACAACGCAGGCATTCTTGGAAATCCTATATTCAACATTCTTGAAAACGAATCATCTGACTTTCAAAAGGTACTCAACGTCAACTTACTTGGGACGTTTTTGGGCACCAAGCATGCAGCAAGGGCAATGATTCCAGCTCGTCAAGGTAGCATAATCATGACGGCAAGTGTTTGCTCGGCAATTGGTGGGATTGGGCCATATGGGTACACGAGCTCAAAGCATGGCGTGTTGGGATTGATGAAGAATGCAACGGTTGATTTAGGACGATATGGGATAAGGGTTAATTGTGTGTCGCCCCATGTGGTGCCCTCAGACATAACTAGAGAGCTGTTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATGTGGAGATATCTTAAGAGCAGAAGATATAGCTGAAGCCGCTTTGTATTTAGCAAGTGATGCATCACGGTTCGTAAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTGCAGCAAACCAAGGTTTTTGCTCCTATCAACAATCTGATGACTAAAAAAGGTTGAAACGAAGAACTACTTGTTTCAGACTTTTGGTTATTTGCTAAAGTTTTATCATGAATTTTCTTCCCAAGTTTTAATTTTGTGCTTTGTGTTTCAGTTAAACTATCATCAGTTATGTTTGTTGCGTCTTTCTCGTGTTTAAAATTATTATAAGAATATGAATTATAATAATAATAATGTAATTTGGTTCTTGATATAATATTTTATATTAGCTCACACAAATCAATAGACA

Coding sequence (CDS)

ATGAGCGTCTCTTTGCTTCCCACCGCTGCAAGAAGGCTAGAAGGCAAAGTGGCCGTAATCTTGGGCGCAGCCAGAGGAATTGGGGAGTCCACAGCAAGAACCTTCTTTAAGCATGGAGCAAAACTCGTGATTGCAGACATCCTAGACGATGTCGGTCACTCTCTTTCCAACCATCTCTGTTCTTCGTCATCTTCATTCGTCCACTGCGACGTAACGAAAGAGAAAGACGTTGAAAATGCGGTTAACACAGCCATTTCCAAGTACGGAAAGTTGGACATCATGTTGAACAACGCAGGCATTCTTGGAAATCCTATATTCAACATTCTTGAAAACGAATCATCTGACTTTCAAAAGGTACTCAACGTCAACTTACTTGGGACGTTTTTGGGCACCAAGCATGCAGCAAGGGCAATGATTCCAGCTCGTCAAGGTAGCATAATCATGACGGCAAGTGTTTGCTCGGCAATTGGTGGGATTGGGCCATATGGGTACACGAGCTCAAAGCATGGCGTGTTGGGATTGATGAAGAATGCAACGGTTGATTTAGGACGATATGGGATAAGGGTTAATTGTGTGTCGCCCCATGTGGTGCCCTCAGACATAACTAGAGAGCTGTTTAAGCTTGAAGATGGCGATGAGTTTCCTAATGTTTATTCGCATTTCAAATGTGGAGATATCTTAAGAGCAGAAGATATAGCTGAAGCCGCTTTGTATTTAGCAAGTGATGCATCACGGTTCGTAAGTGGACATAACTTAATTGTTGATGGAGGCTTCACTGCAGCAAACCAAGGTTTTTGCTCCTATCAACAATCTGATGACTAA

Homology

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BLAST of CmoCh13G003780 vs. Swiss-Prot
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 6.3e-71
Identity = 135/270 (50.00%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 5   LLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSS 64
           +L   ARRLEGKVA+I G A GIGE+TA+ F +HGAK+ IAD+ D++GHS+   + +S+S
Sbjct: 7   VLTAIARRLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEAIGTSNS 66

Query: 65  SFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLNVNL 124
           +++HCDVT E  V+NAV+  +S YGKLDIM +NAGI       I++NE +DF++V +VN+
Sbjct: 67  TYIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFERVFSVNV 126

Query: 125 LGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLGR 184
            G FL  KHAAR MIPAR G+II TAS+ S +GG   + Y  SKH VLGL +N  V+LG+
Sbjct: 127 TGVFLCMKHAARVMIPARSGNIISTASLSSTMGGGSSHAYCGSKHAVLGLTRNLAVELGQ 186

Query: 185 YGIRVNCVSPHVVPSDITRELFKLEDGDEFPNV--YSHFKCGDILRAEDIAEAALYLASD 244
           +GIRVNC+SP  +P+ + ++   +++ +EF NV  ++    G     ED+A AALYLASD
Sbjct: 187 FGIRVNCLSPFGLPTALGKKFSGIKNEEEFENVINFAGNLKGPKFNVEDVANAALYLASD 246

Query: 245 ASRFVSGHNLIVDGGFTAANQGFCSYQQSD 273
            +++VSGHNL +DGGF+  N     +Q  D
Sbjct: 247 EAKYVSGHNLFIDGGFSVCNSVIKVFQYPD 276

[Close]

BLAST of CmoCh13G003780 vs. Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-68
Identity = 136/258 (52.71%), Postives = 178/258 (68.99%), Query Frame = 1


Query: 10  ARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSSSFVHC 69
           AR+L GKVAVI G A GIG  TAR F KHGA++V+ADI D++G SL   L   +SS+VHC
Sbjct: 12  ARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHC 71

Query: 70  DVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLNVNLLGTFL 129
           DVT E DV  AV+ A++++GKLD+M NNAG+ G P F + E    DF++VL VNL+G FL
Sbjct: 72  DVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFL 131

Query: 130 GTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLGRYGIRV 189
           GTKHAAR M PAR+GSII TAS+ S++ G   + YT+SKH ++G  +NA  +LGR+GIRV
Sbjct: 132 GTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRV 191

Query: 190 NCVSPHVVPSDITRELFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASRFV 249
           NCVSP  V + + R    ++D   +      ++ K    L+A+DIA AAL+LASD  R+V
Sbjct: 192 NCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYV 251

Query: 250 SGHNLIVDGGFTAANQGF 266
           SG NL VDGG +  N  F
Sbjct: 252 SGQNLRVDGGLSVVNSSF 269

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BLAST of CmoCh13G003780 vs. Swiss-Prot
Match: SILD_PODPE (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.5e-67
Identity = 132/268 (49.25%), Postives = 187/268 (69.78%), Query Frame = 1


Query: 2   SVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCS 61
           S S   ++  RL+ KVA+I G A GIGE+TA+ F ++GAK+VIADI DD G  + N++ S
Sbjct: 3   STSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS 62

Query: 62  SSS-SFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVL 121
               SFVHCDVTK++DV N V+T I+K+GKLDIM  N G+L    ++ILE  + DF++V+
Sbjct: 63  PDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVM 122

Query: 122 NVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIG-PYGYTSSKHGVLGLMKNAT 181
           ++N+ G FL  KHAAR MIPA++GSI+ TAS+ S   G G  + YT++KH VLGL  +  
Sbjct: 123 DINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLC 182

Query: 182 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAAL 241
            +LG YGIRVNCVSP++V S +  ++F ++    +E  +  ++ K G +LRAED+A+A  
Sbjct: 183 TELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK-GTLLRAEDVADAVA 242

Query: 242 YLASDASRFVSGHNLIVDGGFTAANQGF 266
           YLA D S++VSG NL++DGG+T  N  F
Sbjct: 243 YLAGDESKYVSGLNLVIDGGYTRTNPAF 269

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BLAST of CmoCh13G003780 vs. Swiss-Prot
Match: ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.8e-63
Identity = 124/260 (47.69%), Postives = 173/260 (66.54%), Query Frame = 1


Query: 12  RLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSSS-FVHCD 71
           RLEGKVA++ G A GIGES AR F +HGAK+ I D+ D++G  +S  L     + + HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 72  VTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLNVNLLGTFLG 131
           VT E DV  AV+    KYG +DIM+NNAGI G+ + +I + + ++F+KV ++N+ G FLG
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 132 TKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLGRYGIRVN 191
            KHAAR MIP  +GSI+  ASV S I G GP+GYT +KH V+GL K+   +LGR+GIRVN
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 192 CVSPHVVPSDITRELFKLEDGDE--------FPNVYSHFKCGDILRAEDIAEAALYLASD 251
           CVSP+ VP+ ++       +  E        F    ++ K  D++   D+AEA LYLA++
Sbjct: 182 CVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLM-PNDVAEAVLYLATE 241

Query: 252 ASRFVSGHNLIVDGGFTAAN 263
            S++VSG NL++DGGF+ AN
Sbjct: 242 ESKYVSGLNLVIDGGFSIAN 260

[Close]

BLAST of CmoCh13G003780 vs. Swiss-Prot
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-62
Identity = 131/269 (48.70%), Postives = 181/269 (67.29%), Query Frame = 1


Query: 11  RRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSSS----F 70
           +RLEGKVA+I G A GIG++T   F +HGA +VIAD+ +  G SL+  L S  +S    F
Sbjct: 30  KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query: 71  VHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFN--ILENESSDFQKVLNVNL 130
           + CDV+ E DVEN VN  +++YG+LDI+ NNAG+LG+   +  IL+ ++ +F  V+ VN+
Sbjct: 90  ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query: 131 LGTFLGTKHAARAMIPAR-QGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLG 190
            G  LG KH ARAMI    +G II TASV   +GG+GP+ YT+SKH ++GL KNA  +LG
Sbjct: 150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query: 191 RYGIRVNCVSPHVVPSDITRELFK-----------LEDGDEFPNVYSHFKCGDILRAEDI 250
           +YGIRVNC+SP  V + +    ++           +E+ +EF    ++ K G+ LRA DI
Sbjct: 210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLK-GETLRANDI 269

Query: 251 AEAALYLASDASRFVSGHNLIVDGGFTAA 262
           AEAALYLASD S++V+GHNL+VDGG T A
Sbjct: 270 AEAALYLASDESKYVNGHNLVVDGGVTTA 297

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BLAST of CmoCh13G003780 vs. TrEMBL
Match: A0A0A0LT69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168890 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 4.3e-119
Identity = 215/271 (79.34%), Postives = 239/271 (88.19%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           M V LLP AARRLEGK A+I G ARGIGES A+ FF  GAK+VIADILDD+G+SLSNHL 
Sbjct: 1   MGVPLLPAAARRLEGKAAIITGGARGIGESIAKHFFNPGAKVVIADILDDLGNSLSNHLS 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVL 120
           SSS+SFVHC+VTKE DVEN VNTA+SKYGKLDIM NNAGI G   FNILENE SDFQ VL
Sbjct: 61  SSSTSFVHCNVTKETDVENVVNTAVSKYGKLDIMFNNAGIPGALKFNILENEYSDFQNVL 120

Query: 121 NVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATV 180
           NVNL+G FLGTKHAA+AMIPA QGSI++TASVCS+IGGIGPY YTSSKHG+LGLM+NAT+
Sbjct: 121 NVNLVGAFLGTKHAAKAMIPAGQGSIVITASVCSSIGGIGPYAYTSSKHGLLGLMRNATI 180

Query: 181 DLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSH-FKCGDILRAEDIAEAALYL 240
           DLGRYGI+VNCVSPHVVP+ +TRE FKL+DGDEFP+VYSH FKCGDILR ED+AE  LYL
Sbjct: 181 DLGRYGIKVNCVSPHVVPTQMTREHFKLKDGDEFPDVYSHNFKCGDILRKEDVAEVGLYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQQ 271
           ASDASRFVSGHN ++DGGFTA NQG CSYQQ
Sbjct: 241 ASDASRFVSGHNFVLDGGFTAGNQGLCSYQQ 271

[Close]

BLAST of CmoCh13G003780 vs. TrEMBL
Match: A0A0A0LVV9_CUCSA (TASSELSEED2-like protein OS=Cucumis sativus GN=Csa_1G168880 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 5.0e-99
Identity = 185/270 (68.52%), Postives = 219/270 (81.11%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           MS+ LLP  ARRLEGKVAVI G ARGIGE TA+ FFKHGAK+VIADI D +G +L   L 
Sbjct: 1   MSIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLG 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILG-NPIFNILENESSDFQKV 120
            SSS FVHCDVTKEKDVE AV+TA+SKYGKLDIMLNNAG+   +P F+IL+++   FQ+V
Sbjct: 61  QSSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDILKDDPLTFQRV 120

Query: 121 LNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNAT 180
           +NVNL+G FLGTKHAAR M PA +GSI+ TAS+CS IGGIG + YTSSKHGVLGLM+NA 
Sbjct: 121 VNVNLVGAFLGTKHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLMRNAA 180

Query: 181 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYL 240
           VDLGRYGIRVNCVSP+VVP+++ R+LFK++DG EFP+ Y   K GDILR ED+ EA +YL
Sbjct: 181 VDLGRYGIRVNCVSPNVVPTEMGRKLFKVKDGGEFPSFYWSLKNGDILREEDVGEAVVYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQ 270
            SD S+ VSG NLIVDGGFT  NQ  CS++
Sbjct: 241 GSDESKCVSGLNLIVDGGFTVVNQALCSFR 270

[Close]

BLAST of CmoCh13G003780 vs. TrEMBL
Match: Q94G09_CUCSA (TASSELSEED2-like protein OS=Cucumis sativus GN=CTS2 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 184/270 (68.15%), Postives = 218/270 (80.74%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           MS+ LLP  ARRLEGKVAVI G ARGIGE TA+ FFKHGAK+VIADI D +G +L   L 
Sbjct: 1   MSIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLG 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILG-NPIFNILENESSDFQKV 120
            SSS FVHCDVTKEKDVE AV+TA+SKYGKLDIMLNNAG+   +P F+ L+++   FQ+V
Sbjct: 61  QSSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDFLKDDPLTFQRV 120

Query: 121 LNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNAT 180
           +NVNL+G FLGTKHAAR M PA +GSI+ TAS+CS IGGIG + YTSSKHGVLGLM+NA 
Sbjct: 121 VNVNLVGAFLGTKHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLMRNAA 180

Query: 181 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYL 240
           VDLGRYGIRVNCVSP+VVP+++ R+LFK++DG EFP+ Y   K GDILR ED+ EA +YL
Sbjct: 181 VDLGRYGIRVNCVSPNVVPTEMGRKLFKVKDGGEFPSFYWSLKNGDILREEDVGEAVVYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQ 270
            SD S+ VSG NLIVDGGFT  NQ  CS++
Sbjct: 241 GSDESKCVSGLNLIVDGGFTVVNQALCSFR 270

[Close]

BLAST of CmoCh13G003780 vs. TrEMBL
Match: Q94G10_CUCSA (CTA OS=Cucumis sativus GN=CTA PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 9.3e-98
Identity = 183/270 (67.78%), Postives = 218/270 (80.74%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           MS+ LLP  ARRLEGKVAVI G ARGIGE TA+ FFKHGAK+VIADI D +G +L   L 
Sbjct: 1   MSIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLG 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILG-NPIFNILENESSDFQKV 120
            SSS FVHCDVTKEKDVE AV+TA+SKYGKLDIMLNNAG+   +P F+IL+++   FQ+V
Sbjct: 61  QSSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDILKDDPLTFQRV 120

Query: 121 LNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNAT 180
           +NVNL+G  LGT+HAAR M PA +GSI+ TAS+CS IGGIG + YTSSKHGVLGLM+NA 
Sbjct: 121 VNVNLVGASLGTRHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLMRNAA 180

Query: 181 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYL 240
           VDLGRYGIRVNCVSP+VVP+++ R+LFK++DG EFP+ Y   K GDILR ED+ EA +YL
Sbjct: 181 VDLGRYGIRVNCVSPNVVPTEMGRKLFKVKDGGEFPSFYWSLKNGDILREEDVGEAVVYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQ 270
            SD S+ VSG NLIVDGGFT  NQ  CS++
Sbjct: 241 GSDESKCVSGLNLIVDGGFTVVNQALCSFR 270

[Close]

BLAST of CmoCh13G003780 vs. TrEMBL
Match: U7DZQ7_POPTR (Alcohol dehydroge family protein OS=Populus trichocarpa GN=POPTR_0329s00201g PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.8e-93
Identity = 175/270 (64.81%), Postives = 213/270 (78.89%), Query Frame = 1


Query: 2   SVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCS 61
           SVSL+  A RRLEGKVA+I G + GIGESTAR F KHGAK+VIADI D++GHS+   L  
Sbjct: 3   SVSLVSAALRRLEGKVALITGGSSGIGESTARLFVKHGAKVVIADIQDELGHSVCKELEP 62

Query: 62  SSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLN 121
             +SF+HCDVT+EKDVENAVNTA+SKYGKLDIM NNAG  G P  NI+EN+ ++F+K++ 
Sbjct: 63  EPASFIHCDVTQEKDVENAVNTAVSKYGKLDIMFNNAGTGGTPKTNIIENDKAEFEKIIC 122

Query: 122 VNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVD 181
            NL+G FLGTKHAAR MIPAR+GSII TASVC+ IGG   + YTSSKHGVLGLM+N  V+
Sbjct: 123 ANLVGAFLGTKHAARVMIPARRGSIITTASVCAIIGGGSSHAYTSSKHGVLGLMRNTAVE 182

Query: 182 LGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLAS 241
           LG+YGIRVNCVSP+ VP+ + +  FK+ D DE   +YS+ K   +L AEDIAEAALYL S
Sbjct: 183 LGQYGIRVNCVSPYAVPTPLFKNFFKMND-DEVSCIYSNLK-EAVLEAEDIAEAALYLGS 242

Query: 242 DASRFVSGHNLIVDGGFTAANQGFCSYQQS 272
           D S++VSGHNL+VDGGFT  N GFC + +S
Sbjct: 243 DESKYVSGHNLVVDGGFTIVNPGFCMFPRS 270

[Close]

BLAST of CmoCh13G003780 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 241.5 bits (615), Expect = 6.0e-64
Identity = 131/269 (48.70%), Postives = 181/269 (67.29%), Query Frame = 1


Query: 11  RRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSSS----F 70
           +RLEGKVA+I G A GIG++T   F +HGA +VIAD+ +  G SL+  L S  +S    F
Sbjct: 30  KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query: 71  VHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFN--ILENESSDFQKVLNVNL 130
           + CDV+ E DVEN VN  +++YG+LDI+ NNAG+LG+   +  IL+ ++ +F  V+ VN+
Sbjct: 90  ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query: 131 LGTFLGTKHAARAMIPAR-QGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLG 190
            G  LG KH ARAMI    +G II TASV   +GG+GP+ YT+SKH ++GL KNA  +LG
Sbjct: 150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query: 191 RYGIRVNCVSPHVVPSDITRELFK-----------LEDGDEFPNVYSHFKCGDILRAEDI 250
           +YGIRVNC+SP  V + +    ++           +E+ +EF    ++ K G+ LRA DI
Sbjct: 210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLK-GETLRANDI 269

Query: 251 AEAALYLASDASRFVSGHNLIVDGGFTAA 262
           AEAALYLASD S++V+GHNL+VDGG T A
Sbjct: 270 AEAALYLASDESKYVNGHNLVVDGGVTTA 297

[Close]

BLAST of CmoCh13G003780 vs. TAIR10
Match: AT1G52340.1 (AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 6.9e-60
Identity = 124/276 (44.93%), Postives = 168/276 (60.87%), Query Frame = 1


Query: 2   SVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCS 61
           S S LP+  +RL GKVA+I G A GIGES  R F KHGAK+ I D+ DD+G  +   L  
Sbjct: 9   SYSSLPS--QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLR 68

Query: 62  SSSS----FVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQ 121
             S     F+H DV  E D+ NAV+ A+  +G LDI++NNAG+ G P  +I     S+F+
Sbjct: 69  GESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFE 128

Query: 122 KVLNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKN 181
              +VN+ G FL  KHAAR MIP ++GSI+   SV   +GG+GP+ Y  SKH VLGL ++
Sbjct: 129 MTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRS 188

Query: 182 ATVDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDE--------FPNVYSHFKCGDILRA 241
              +LG++GIRVNCVSP+ V + +       E+  E        F    ++ K G  L  
Sbjct: 189 VAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLK-GVELTV 248

Query: 242 EDIAEAALYLASDASRFVSGHNLIVDGGFTAANQGF 266
           +D+A A L+LASD SR++SG NL++DGGFT  N  F
Sbjct: 249 DDVANAVLFLASDDSRYISGDNLMIDGGFTCTNHSF 281

[Close]

BLAST of CmoCh13G003780 vs. TAIR10
Match: AT2G47140.1 (AT2G47140.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57
Identity = 113/254 (44.49%), Postives = 172/254 (67.72%), Query Frame = 1


Query: 9   AARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSSSFVH 68
           + +RL+GK+ +I G A GIG  + R F +HGA++VI D+ D++G +++  +    +S+ H
Sbjct: 2   SGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYH 61

Query: 69  CDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLNVNLLGTF 128
           CDVT E +VENAV   + KYGKLD++ +NAG++  P  +IL+   ++  + + +NL GT 
Sbjct: 62  CDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRGTA 121

Query: 129 LGTKHAARAMI-PARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLGRYGI 188
              KHAARAM+    +GSI+ T SV + I G  P+GYT+SKHG+LGL+K+A+  LG+YGI
Sbjct: 122 AFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGI 181

Query: 189 RVNCVSPHVVPSDITRELFKLEDG--DEFPNVYSHFKCGDILRAEDIAEAALYLASDASR 248
           RVN V+P  V + +    FK+E    ++  +  ++ K G +L+A  +AEAAL+LASD S 
Sbjct: 182 RVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLK-GIVLKARHVAEAALFLASDESA 241

Query: 249 FVSGHNLIVDGGFT 260
           +VSG NL VDGG++
Sbjct: 242 YVSGQNLAVDGGYS 253

[Close]

BLAST of CmoCh13G003780 vs. TAIR10
Match: AT3G26760.1 (AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-57
Identity = 117/270 (43.33%), Postives = 177/270 (65.56%), Query Frame = 1


Query: 2   SVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCS 61
           S  L  T++R+LEGKVAVI G A GIG++TA  F   GA+++I DI ++ GH ++  L  
Sbjct: 25  STLLYSTSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATEL-G 84

Query: 62  SSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGI---LGNPIFNILENESSDFQK 121
           S++ F+ CDVT+E+ +  AV TA++++GKLD+MLN+AGI   +  P  +I + +   + K
Sbjct: 85  SAAHFLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPP--SIADLDMDTYDK 144

Query: 122 VLNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNA 181
           V+ +N+ GT LG KHAARAMIPA  GSI+  +S+   +GG+GP+ Y+ SK  + G++K  
Sbjct: 145 VMRLNVRGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTV 204

Query: 182 TVDLGRYGIRVNCVSPHVVPSDITRELF---------KLEDGDEFPNVYSHFKCGDILRA 241
             +L ++G+R+NC+SP  +P+ +T  +F         + E      N     K G+    
Sbjct: 205 ASELCKHGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELK-GEKCEE 264

Query: 242 EDIAEAALYLASDASRFVSGHNLIVDGGFT 260
            D+A+AALYLASD ++FV+GHNL+VDGGFT
Sbjct: 265 IDVAKAALYLASDDAKFVTGHNLVVDGGFT 290

[Close]

BLAST of CmoCh13G003780 vs. TAIR10
Match: AT2G47130.1 (AT2G47130.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 212.2 bits (539), Expect = 3.9e-55
Identity = 115/250 (46.00%), Postives = 163/250 (65.20%), Query Frame = 1


Query: 12  RLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCSSSSSFVHCDV 71
           RL+GK+A+I G A GIG    R F  HGAK+VI D  +++G +++  +    +SF  CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 72  TKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLNVNLLGTFLGT 131
           T EK+VENAV   + KYGKLD++ +NAG++  P  + L+     F + + VN+ G     
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAFI 124

Query: 132 KHAARAMI-PARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVDLGRYGIRVN 191
           KHAARAM+    +GSI+ T SV S IGG GP+ YT+SKH +LGL+K+A   LG+YGIRVN
Sbjct: 125 KHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVN 184

Query: 192 CVSPHVVPSDI-TRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLASDASRFVSG 251
            V+P+ V + I +R+   +   +E+       K G +L+A  +AEAAL+LASD S +VSG
Sbjct: 185 GVAPYAVATAINSRDEETVRMVEEYSAATGILK-GVVLKARHVAEAALFLASDDSAYVSG 244

Query: 252 HNLIVDGGFT 260
            NL VDGG++
Sbjct: 245 QNLAVDGGYS 252

[Close]

BLAST of CmoCh13G003780 vs. NCBI nr
Match: gi|449443650|ref|XP_004139590.1| (PREDICTED: secoisolariciresinol dehydrogenase [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 6.2e-119
Identity = 215/271 (79.34%), Postives = 239/271 (88.19%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           M V LLP AARRLEGK A+I G ARGIGES A+ FF  GAK+VIADILDD+G+SLSNHL 
Sbjct: 1   MGVPLLPAAARRLEGKAAIITGGARGIGESIAKHFFNPGAKVVIADILDDLGNSLSNHLS 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVL 120
           SSS+SFVHC+VTKE DVEN VNTA+SKYGKLDIM NNAGI G   FNILENE SDFQ VL
Sbjct: 61  SSSTSFVHCNVTKETDVENVVNTAVSKYGKLDIMFNNAGIPGALKFNILENEYSDFQNVL 120

Query: 121 NVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATV 180
           NVNL+G FLGTKHAA+AMIPA QGSI++TASVCS+IGGIGPY YTSSKHG+LGLM+NAT+
Sbjct: 121 NVNLVGAFLGTKHAAKAMIPAGQGSIVITASVCSSIGGIGPYAYTSSKHGLLGLMRNATI 180

Query: 181 DLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSH-FKCGDILRAEDIAEAALYL 240
           DLGRYGI+VNCVSPHVVP+ +TRE FKL+DGDEFP+VYSH FKCGDILR ED+AE  LYL
Sbjct: 181 DLGRYGIKVNCVSPHVVPTQMTREHFKLKDGDEFPDVYSHNFKCGDILRKEDVAEVGLYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQQ 271
           ASDASRFVSGHN ++DGGFTA NQG CSYQQ
Sbjct: 241 ASDASRFVSGHNFVLDGGFTAGNQGLCSYQQ 271

[Close]

BLAST of CmoCh13G003780 vs. NCBI nr
Match: gi|700209866|gb|KGN64962.1| (TASSELSEED2-like protein [Cucumis sativus])

HSP 1 Score: 369.0 bits (946), Expect = 7.1e-99
Identity = 185/270 (68.52%), Postives = 219/270 (81.11%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           MS+ LLP  ARRLEGKVAVI G ARGIGE TA+ FFKHGAK+VIADI D +G +L   L 
Sbjct: 1   MSIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLG 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILG-NPIFNILENESSDFQKV 120
            SSS FVHCDVTKEKDVE AV+TA+SKYGKLDIMLNNAG+   +P F+IL+++   FQ+V
Sbjct: 61  QSSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDILKDDPLTFQRV 120

Query: 121 LNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNAT 180
           +NVNL+G FLGTKHAAR M PA +GSI+ TAS+CS IGGIG + YTSSKHGVLGLM+NA 
Sbjct: 121 VNVNLVGAFLGTKHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLMRNAA 180

Query: 181 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYL 240
           VDLGRYGIRVNCVSP+VVP+++ R+LFK++DG EFP+ Y   K GDILR ED+ EA +YL
Sbjct: 181 VDLGRYGIRVNCVSPNVVPTEMGRKLFKVKDGGEFPSFYWSLKNGDILREEDVGEAVVYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQ 270
            SD S+ VSG NLIVDGGFT  NQ  CS++
Sbjct: 241 GSDESKCVSGLNLIVDGGFTVVNQALCSFR 270

[Close]

BLAST of CmoCh13G003780 vs. NCBI nr
Match: gi|821595256|ref|NP_001295763.1| (secoisolariciresinol dehydrogenase [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 2.1e-98
Identity = 184/270 (68.15%), Postives = 218/270 (80.74%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           MS+ LLP  ARRLEGKVAVI G ARGIGE TA+ FFKHGAK+VIADI D +G +L   L 
Sbjct: 1   MSIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLG 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILG-NPIFNILENESSDFQKV 120
            SSS FVHCDVTKEKDVE AV+TA+SKYGKLDIMLNNAG+   +P F+ L+++   FQ+V
Sbjct: 61  QSSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDFLKDDPLTFQRV 120

Query: 121 LNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNAT 180
           +NVNL+G FLGTKHAAR M PA +GSI+ TAS+CS IGGIG + YTSSKHGVLGLM+NA 
Sbjct: 121 VNVNLVGAFLGTKHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLMRNAA 180

Query: 181 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYL 240
           VDLGRYGIRVNCVSP+VVP+++ R+LFK++DG EFP+ Y   K GDILR ED+ EA +YL
Sbjct: 181 VDLGRYGIRVNCVSPNVVPTEMGRKLFKVKDGGEFPSFYWSLKNGDILREEDVGEAVVYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQ 270
            SD S+ VSG NLIVDGGFT  NQ  CS++
Sbjct: 241 GSDESKCVSGLNLIVDGGFTVVNQALCSFR 270

[Close]

BLAST of CmoCh13G003780 vs. NCBI nr
Match: gi|15077028|gb|AAK83035.1|AF286650_1 (CTA [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97
Identity = 183/270 (67.78%), Postives = 218/270 (80.74%), Query Frame = 1


Query: 1   MSVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLC 60
           MS+ LLP  ARRLEGKVAVI G ARGIGE TA+ FFKHGAK+VIADI D +G +L   L 
Sbjct: 1   MSIQLLPAIARRLEGKVAVITGGARGIGEQTAKLFFKHGAKVVIADIQDHLGQTLCKDLG 60

Query: 61  SSSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILG-NPIFNILENESSDFQKV 120
            SSS FVHCDVTKEKDVE AV+TA+SKYGKLDIMLNNAG+   +P F+IL+++   FQ+V
Sbjct: 61  QSSSVFVHCDVTKEKDVETAVDTAVSKYGKLDIMLNNAGVFEESPNFDILKDDPLTFQRV 120

Query: 121 LNVNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNAT 180
           +NVNL+G  LGT+HAAR M PA +GSI+ TAS+CS IGGIG + YTSSKHGVLGLM+NA 
Sbjct: 121 VNVNLVGASLGTRHAARVMKPAGRGSIVTTASICSVIGGIGTHAYTSSKHGVLGLMRNAA 180

Query: 181 VDLGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYL 240
           VDLGRYGIRVNCVSP+VVP+++ R+LFK++DG EFP+ Y   K GDILR ED+ EA +YL
Sbjct: 181 VDLGRYGIRVNCVSPNVVPTEMGRKLFKVKDGGEFPSFYWSLKNGDILREEDVGEAVVYL 240

Query: 241 ASDASRFVSGHNLIVDGGFTAANQGFCSYQ 270
            SD S+ VSG NLIVDGGFT  NQ  CS++
Sbjct: 241 GSDESKCVSGLNLIVDGGFTVVNQALCSFR 270

[Close]

BLAST of CmoCh13G003780 vs. NCBI nr
Match: gi|743796896|ref|XP_011006635.1| (PREDICTED: secoisolariciresinol dehydrogenase-like [Populus euphratica])

HSP 1 Score: 353.6 bits (906), Expect = 3.1e-94
Identity = 172/270 (63.70%), Postives = 222/270 (82.22%), Query Frame = 1


Query: 2   SVSLLPTAARRLEGKVAVILGAARGIGESTARTFFKHGAKLVIADILDDVGHSLSNHLCS 61
           SVSL+  A RRLEGKVA+I G + GIGES AR F KHGAK+VIAD+ D++GHS+   L +
Sbjct: 3   SVSLVSAALRRLEGKVALITGGSSGIGESAARLFAKHGAKVVIADVQDELGHSVCEELKN 62

Query: 62  SSSSFVHCDVTKEKDVENAVNTAISKYGKLDIMLNNAGILGNPIFNILENESSDFQKVLN 121
            S+SFVHCDVT+EKDVENAVNTA+SK+GKLDIM NNAG++G+P  NIL+N+ ++F+KV++
Sbjct: 63  ESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGVVGSPKPNILDNDKAEFEKVIS 122

Query: 122 VNLLGTFLGTKHAARAMIPARQGSIIMTASVCSAIGGIGPYGYTSSKHGVLGLMKNATVD 181
           VN++G FLGTKHAAR MIPAR+GSII TASVC  IGG+  + YTSSKHGV+GLM+N  V+
Sbjct: 123 VNIVGAFLGTKHAARVMIPARRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVE 182

Query: 182 LGRYGIRVNCVSPHVVPSDITRELFKLEDGDEFPNVYSHFKCGDILRAEDIAEAALYLAS 241
           LG++GIRVNCVSP++V + + ++ FKL+D ++   VYS+ K   +L+AED+AEAAL+L S
Sbjct: 183 LGQHGIRVNCVSPYLVSTPLAKDFFKLDD-NKVNRVYSNLK-EAVLKAEDVAEAALFLGS 242

Query: 242 DASRFVSGHNLIVDGGFTAANQGFCSYQQS 272
           D S++VSGHNLIVDGGFT  N GFC + QS
Sbjct: 243 DESKYVSGHNLIVDGGFTIVNPGFCMFPQS 270

The following BLAST results are available for this feature:

BLAST of CmoCh13G003780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SILD_FORIN	6.3e-71	50.00	Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1	[more]
MOMAS_ORYSJ	1.3e-68	52.71	Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1	[more]
SILD_PODPE	5.5e-67	49.25	Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum PE=1 SV=1	[more]
ZERSY_ZINZE	4.8e-63	47.69	Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1	[more]
SDR2A_ARATH	1.1e-62	48.70	Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=...	[more]

BLAST of CmoCh13G003780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT69_CUCSA	4.3e-119	79.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168890 PE=4 SV=1	[more]
A0A0A0LVV9_CUCSA	5.0e-99	68.52	TASSELSEED2-like protein OS=Cucumis sativus GN=Csa_1G168880 PE=4 SV=1	[more]
Q94G09_CUCSA	1.4e-98	68.15	TASSELSEED2-like protein OS=Cucumis sativus GN=CTS2 PE=2 SV=1	[more]
Q94G10_CUCSA	9.3e-98	67.78	CTA OS=Cucumis sativus GN=CTA PE=2 SV=1	[more]
U7DZQ7_POPTR	1.8e-93	64.81	Alcohol dehydroge family protein OS=Populus trichocarpa GN=POPTR_0329s00201g PE=...	[more]

BLAST of CmoCh13G003780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51680.1	6.0e-64	48.70	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G52340.1	6.9e-60	44.93	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47140.1	1.1e-57	44.49	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G26760.1	1.4e-57	43.33	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47130.1	3.9e-55	46.00	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of CmoCh13G003780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443650\|ref\|XP_004139590.1\|	6.2e-119	79.34	PREDICTED: secoisolariciresinol dehydrogenase [Cucumis sativus]	[more]
gi\|700209866\|gb\|KGN64962.1\|	7.1e-99	68.52	TASSELSEED2-like protein [Cucumis sativus]	[more]
gi\|821595256\|ref\|NP_001295763.1\|	2.1e-98	68.15	secoisolariciresinol dehydrogenase [Cucumis sativus]	[more]
gi\|15077028\|gb\|AAK83035.1\|AF286650_1	1.3e-97	67.78	CTA [Cucumis sativus]	[more]
gi\|743796896\|ref\|XP_011006635.1\|	3.1e-94	63.70	PREDICTED: secoisolariciresinol dehydrogenase-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003780.1	CmoCh13G003780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 89..100 score: 5.5E-8coord: 144..152 score: 5.5E-8coord: 164..183 score: 5.
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 222..242 score: 2.4E-33coord: 89..100 score: 2.4E-33coord: 138..154 score: 2.4E-33coord: 17..34 score: 2.4E-33coord: 164..183 score: 2.4E-33coord: 185..202 score: 2.4
IPR002347	Short-chain dehydrogenase/reductase SDR	PANTHER	PTHR24322	FAMILY NOT NAMED	coord: 20..148 score: 8.9E-82coord: 164..196 score: 8.9
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 11..260 score: 1.4
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 14..260 score: 2.29
None	No IPR available	PANTHER	PTHR24322:SF600	SUBFAMILY NOT NAMED	coord: 20..148 score: 8.9E-82coord: 164..196 score: 8.9
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 22..259 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G003780	Cucurbita moschata (Rifu)	cmocmoB168
CmoCh13G003780	Cucumber (Gy14) v1	cgycmoB0880
CmoCh13G003780	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G003780	Cucurbita maxima (Rimu)	cmacmoB395
CmoCh13G003780	Wild cucumber (PI 183967)	cmocpiB208
CmoCh13G003780	Cucumber (Chinese Long) v2	cmocuB206
CmoCh13G003780	Melon (DHL92) v3.5.1	cmomeB182
CmoCh13G003780	Watermelon (Charleston Gray)	cmowcgB171
CmoCh13G003780	Watermelon (97103) v1	cmowmB189
CmoCh13G003780	Cucurbita pepo (Zucchini)	cmocpeB180
CmoCh13G003780	Bottle gourd (USVL1VR-Ls)	cmolsiB194
CmoCh13G003780	Cucumber (Gy14) v2	cgybcmoB072
CmoCh13G003780	Melon (DHL92) v3.6.1	cmomedB209
CmoCh13G003780	Cucumber (Chinese Long) v3	cmocucB0239
CmoCh13G003780	Watermelon (97103) v2	cmowmbB192
CmoCh13G003780	Wax gourd	cmowgoB0254