CmoCh13G003620 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G003620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMitochondrial transcription termination factor family protein, putative
LocationCmo_Chr13 : 4630340 .. 4631825 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCCTCCTATTCTTTCCGGCTGCCATTCTCTCATAATCCCCTTCCCGCCGCTCGCTGTCACTCCTCCGACTCCCATTTTCCCCCTTCCCCGCCGCTCGCTGCCACTCCTCCGCCTCCCGTTTTCATTATTCGTTACTCTTGCGAGGCATTCGTGTTTCTCTGATTCGTCTTCTCAAGAGGAAGCAGGTTTTCTTTCCCCTCGCGTTTTCACAGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTGAGATCGCATCATCTCCAAAATCTGCATCGCCGGATTCTAATTCTGTCAGGCCAGAGAACGATGAGAAGCCTGTAATCGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCAAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGTGCTACTTCAAACTAAGGAGAAGGCTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACTGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGGTAAACACCGTCCGATTCAAGGAGATTGTGGAGGACGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTATGCGAGCAATGAGCAAATGTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCGTCGCTTTTCGAAGGCATCCATGGTGCATGATGGCTTCGGAGGACAAGATCAATGGCATAATGGATTTCTTTGTGAACAAGATTGGATGTGAAACTTCATACGTTGCAAAGCGACCTGCTGTGATTACACTTAGTTTAAAGAAGAGGATTGTGCCAAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTATGGTGTTCGAGTCTACTGAAAGCCGATTCTTAGACAAATTCATCGACCCTCATAAGGAGCTGATTCCTGGATTGTTGAAGTTGTATAAAGAGAAATTGGAGGATGCTAAGAGATAGCAGGTTCAATCTCCTTCTCTAAATGTTAATATTTACCTGTTTTGCTTGTTCATATGTCTATTCATATCTAAAATTGATGTATGTTCAAGAGCTTGTGCTGAATTGGCTGCTATTTAGATTGTTAACTAAATGATGGTTTGAGCTGAATTGACTATAGCACGTTGTAAGTGGAGTCTGA

mRNA sequence

CCGCCTCCTATTCTTTCCGGCTGCCATTCTCTCATAATCCCCTTCCCGCCGCTCGCTGTCACTCCTCCGACTCCCATTTTCCCCCTTCCCCGCCGCTCGCTGCCACTCCTCCGCCTCCCGTTTTCATTATTCGTTACTCTTGCGAGGCATTCGTGTTTCTCTGATTCGTCTTCTCAAGAGGAAGCAGGTTTTCTTTCCCCTCGCGTTTTCACAGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTGAGATCGCATCATCTCCAAAATCTGCATCGCCGGATTCTAATTCTGTCAGGCCAGAGAACGATGAGAAGCCTGTAATCGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCAAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGTGCTACTTCAAACTAAGGAGAAGGCTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACTGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGGTAAACACCGTCCGATTCAAGGAGATTGTGGAGGACGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTATGCGAGCAATGAGCAAATGTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCGTCGCTTTTCGAAGGCATCCATGGTGCATGATGGCTTCGGAGGACAAGATCAATGGCATAATGGATTTCTTTGTGAACAAGATTGGATGTGAAACTTCATACGTTGCAAAGCGACCTGCTGTGATTACACTTAGTTTAAAGAAGAGGATTGTGCCAAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTATGGTGTTCGAGTCTACTGAAAGCCGATTCTTAGACAAATTCATCGACCCTCATAAGGAGCTGATTCCTGGATTGTTGAAGTTGTATAAAGAGAAATTGGAGGATGCTAAGAGATAGCACGTTGTAAGTGGAGTCTGA

Coding sequence (CDS)

ATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTGAGATCGCATCATCTCCAAAATCTGCATCGCCGGATTCTAATTCTGTCAGGCCAGAGAACGATGAGAAGCCTGTAATCGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCAAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGTGCTACTTCAAACTAAGGAGAAGGCTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACTGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGGTAAACACCGTCCGATTCAAGGAGATTGTGGAGGACGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTATGCGAGCAATGAGCAAATGTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCGTCGCTTTTCGAAGGCATCCATGGTGCATGATGGCTTCGGAGGACAAGATCAATGGCATAATGGATTTCTTTGTGAACAAGATTGGATGTGAAACTTCATACGTTGCAAAGCGACCTGCTGTGATTACACTTAGTTTAAAGAAGAGGATTGTGCCAAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTATGGTGTTCGAGTCTACTGAAAGCCGATTCTTAGACAAATTCATCGACCCTCATAAGGAGCTGATTCCTGGATTGTTGAAGTTGTATAAAGAGAAATTGGAGGATGCTAAGAGATAG
Homology
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BLAST of CmoCh13G003620 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.2e-06
Identity = 46/190 (24.21%), Postives = 89/190 (46.84%), Query Frame = 1 

Query: 59  KPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGF 118
           KPV+    + G  K+ I  ++ K PQ+   +    L P + F ++ G+   + AK++  F
Sbjct: 233 KPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRF 292

Query: 119 PSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQIGV 178
           P+ILT S  +K+    +++     T+E+    + R   I+++ ++  +RP +E    + V
Sbjct: 293 PAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV 352

Query: 179 PDSNIATILQYQPRVF-LVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRK 238
              ++A +L   P+ F L      K + E   E GF    +  +++    R  +  T+  
Sbjct: 353 ---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMIS----RYGALYTFSL 412

Query: 239 KVEVYKKWGW 247
           K  V  KW +
Sbjct: 413 KENVMPKWDY 414

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BLAST of CmoCh13G003620 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.7e-86
Identity = 175/326 (53.68%), Postives = 232/326 (71.17%), Query Frame = 1 

Query: 41  SPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           S K A   S  V  E+ +KP  V+ LF +HGFSKTQ S++ KK PQ+L ++P+KTLLPKL
Sbjct: 67  SHKDARSASKYVHFESPDKPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKL 126

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF SKG S P+IAK+V   PSIL RSL+ +IIP+F++ +  LQ+ + AI  +KR   IL
Sbjct: 127 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRIL 186

Query: 161 TWDLQT-VRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
            +DL T V  N+  L + GVP SNIA +L  QP  F+V    F+E +E+VK MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQM 246

Query: 221 KFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFV 280
           KFV+A+ A+RA  K +W +K+++YK+WGW EEEI +AF + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 306

Query: 281 NKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLD 340
           NK+G E+S +A+RP +I+ SL+KRI+PR  V QVLLSKGLI KD +L  VF+STE  FL 
Sbjct: 307 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLH 366

Query: 341 KFIDPHKELIPGLLKLYKEKLEDAKR 364
           KF+D +KE  P LL LY+EKL   K+
Sbjct: 367 KFVDVYKEEAPQLLNLYQEKLNLTKK 392

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BLAST of CmoCh13G003620 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.2e-86
Identity = 168/316 (53.16%), Postives = 230/316 (72.78%), Query Frame = 1 

Query: 41  SPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           S K A   S  +R E  EKP  V+  F +HGFSK+Q S++VK  P++L+++P+KTLLPKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF SKG S P++AK+V   P IL RSL+ +IIP+F++++  LQ+ E AI  +KR   IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 161 TWDLQT-VRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
            +DL T V  N+  L + GVP SNIA +L Y+P  F+VN   F++ +E+VK+MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 221 KFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFV 280
           KFVLA+ AMRA  +  W +K+++YKKWGW EEEI +AF + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 281 NKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLD 340
           NK+G E+S +A RP +I LSL+KRI+PR  V QVLLSKGLI KD++L ++FESTE  FL+
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 341 KFIDPHKELIPGLLKL 354
           +F++ +KE  P L+KL
Sbjct: 367 RFVNAYKEEAPQLIKL 382

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BLAST of CmoCh13G003620 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 8.4e-86
Identity = 167/321 (52.02%), Postives = 231/321 (71.96%), Query Frame = 1 

Query: 41  SPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           S K A   S  +  E  EKP  V+  F +HGFSKTQ S++VK  PQ+L ++P+KTLLPKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF SKG S P++AK+V   P+I+ RSL+ ++IP++++ +  LQ+ + AI  +KR   IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 161 TWDLQT-VRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
            +D+ T V  N+  L + GVP SNIA +L+ QP  F+V    F+E +E+VK+MGFNP ++
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 221 KFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFV 280
           KFV+AV A+RA  K +W +K+++YK WGW EEEI +AF + PWCM+ SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 281 NKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLD 340
           NK+G E+S +A+RP +I+ SL+KRI+PR  V QVLLSKGLI KD +LP VF+STE  FL 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 341 KFIDPHKELIPGLLKLYKEKL 359
           KF++ +KE  P L+KLY+EK+
Sbjct: 364 KFVNVYKEEAPQLMKLYQEKI 384

[Close]
BLAST of CmoCh13G003620 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 8.4e-86
Identity = 172/326 (52.76%), Postives = 231/326 (70.86%), Query Frame = 1 

Query: 41  SPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           S K A   S     E  +KP  V+  F +HGFSK+QIS++VK  P++L+++P+KTLLPKL
Sbjct: 61  SHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKL 120

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF SKG S P++AK+V   P IL RSL+ +IIP+F++ +  LQ+ E AI  IKR   IL
Sbjct: 121 QFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRIL 180

Query: 161 TWDLQT-VRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
            +DL T V  N+  L + GVP SNIA +L  +P  F+V    F+E +E+VK+MGFNP ++
Sbjct: 181 LFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQM 240

Query: 221 KFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFV 280
           KFV+A+ AMRAM K TW +K++ YK+WGW EEEI +AF + P CM  SEDKI   MDFFV
Sbjct: 241 KFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFV 300

Query: 281 NKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLD 340
           NK+G E+S +A+RP +I LSL+KRI+PR  V QVLLSKGLIK D +L ++FESTE  FL 
Sbjct: 301 NKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLR 360

Query: 341 KFIDPHKELIPGLLKLYKEKLEDAKR 364
           KF++  KE  P L+KLY+EK+  +K+
Sbjct: 361 KFVNGFKEEAPQLMKLYQEKINLSKK 386

[Close]
BLAST of CmoCh13G003620 vs. TrEMBL
Match: B9RG71_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451930 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.6e-81
Identity = 161/326 (49.39%), Postives = 231/326 (70.86%), Query Frame = 1 

Query: 41  SPKSASPDSNSVRPENDEKPVIVL--FENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           SP+SA   S SV  EN EKP +VL  F+N GFSK+QISE+++K+P++LS NPEK + PK+
Sbjct: 52  SPESAVSISKSVSFENPEKPDLVLSFFKNLGFSKSQISEIIRKYPRILSPNPEKAIFPKV 111

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF+SKG S+P++ ++   +P + TRSLD +++P+F++ +   Q+ EK IA+IKR   IL
Sbjct: 112 EFFRSKGASTPDLIRIFSCYPWLFTRSLDNQLVPSFNFFRDFHQSDEKTIAAIKRYPNIL 171

Query: 161 TWDLQT-VRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
              L+T V PN+ TL + GVP +NI  +++Y P+   + T +FK+IVE+VK MGF+PL+ 
Sbjct: 172 ARRLETAVIPNINTLQENGVPAANILLLVRYHPQKIEMETDKFKKIVEEVKIMGFDPLKS 231

Query: 221 KFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFV 280
           +FVLA+  +   S+  W +KV+VYK+WGW  E+I  AF ++PWCM  SEDK+  +MDF+V
Sbjct: 232 QFVLAIMVLIGTSRSMWDRKVDVYKRWGWSTEDIYRAFAKYPWCMAISEDKVMAVMDFYV 291

Query: 281 NKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLD 340
           NK+  E+S  A RP +++LSLKKR+VPR  V Q L SK LIK D  +  VFE TE  F++
Sbjct: 292 NKLNLESSVTAHRPLLLSLSLKKRLVPRASVIQFLSSKSLIKMDSGITRVFEYTEKDFME 351

Query: 341 KFIDPHKELIPGLLKLYKEKLEDAKR 364
           K I+ ++E  P LLKLY EKLE +K+
Sbjct: 352 KCINCYEE-APQLLKLYNEKLELSKQ 376

[Close]
BLAST of CmoCh13G003620 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 236.1 bits (601), Expect = 3.4e-62
Identity = 126/318 (39.62%), Postives = 200/318 (62.89%), Query Frame = 1 

Query: 41  SPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKL 100
           SP SA+  S  +  ++ E+P  V+ L  +HGF+  QIS LVKK P +L AN E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 101 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGIL 160
            FF S G+S   +A+ +   P+ILTRSL  ++IP++++++ +L + EK +A+++R+  + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 161 TWD-LQTVRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 220
             D  + + PN+  + + GVP+  I  +L + P   +     F+ I +  +EMGFNP + 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 221 KFVLAVFAMRAM-SKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFF 280
            FVLA+ A+    +K  W K  EVY++WGW E++I+ AF++HP CMM SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 281 VNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFL 340
           VN++      +A+ P V+  SL+KRI+PR  V +VL+S GL+K+D +L  +    E  FL
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 341 DKFIDPHKELIPGLLKLY 355
           +K +  ++E +P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]
BLAST of CmoCh13G003620 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 203.4 bits (516), Expect = 2.4e-52
Identity = 112/331 (33.84%), Postives = 193/331 (58.31%), Query Frame = 1 

Query: 26  LKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFP 85
           L+S   S        S +SA  +S  V+  + +KP  V+ LF++HGF+  QI+ ++K FP
Sbjct: 54  LESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFP 113

Query: 86  QVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQT 145
           +VLS +PE  + PKL+FF S G S+ + AK++   P +L+ SL +++IP +D ++ +L  
Sbjct: 114 RVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVE 173

Query: 146 KEKAIASIKRSLGILTWDL-QTVRPNVETLIQIGVPDSNIATILQYQPRVFLVNTVRFKE 205
           +E  +  +KR +   +  +   V   V    ++GVPD +I  ++Q  P  F     RF E
Sbjct: 174 EESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNE 233

Query: 206 IVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCM 265
           ++  V   GF+P +  FV A+ A    S+    +K ++++ +GW +E+ + A  R P C+
Sbjct: 234 VLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCV 293

Query: 266 MASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKRIVPRGFVYQVLLSKGLIKK-D 325
             S++KI   +++ VN IG +   +  RP V++LS++KRI PR  V  +LLSKGL+KK D
Sbjct: 294 TVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKED 353

Query: 326 VNLPMVFESTESRFLDKFIDPHKELIPGLLK 353
           +N   + +   S F+DKF+  +++ +P L++
Sbjct: 354 INYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]
BLAST of CmoCh13G003620 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-37
Identity = 95/305 (31.15%), Postives = 168/305 (55.08%), Query Frame = 1 

Query: 59  KPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGF 118
           + VI + +++ FS TQI + ++  P+++  N EK L PKL FF+  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 119 PSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT---VRPNVETLIQI 178
            S++  SL +K+IP  + ++ ++  K + +  I    G L         + PN+  L   
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 179 GVPDSNIATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWR 238
           G+  S +A++L+ QPR+F ++  + +  V    ++GF       V AV ++ ++S+ T+ 
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 239 KKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVIT 298
           +KV+++   G+ E+EI    RR P  +  SEDK+    +F++ ++G E   +AKRP V++
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 299 LSLKKRIVPRGFVYQVLLSKGLI----KKDVNLPMVFESTESRFLDKFIDPH-KELIPGL 356
            +L+KR++PR  V Q+L  KGL+    KK  N+  + E TE  FL+K++     E+   L
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

[Close]
BLAST of CmoCh13G003620 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 93/307 (30.29%), Postives = 158/307 (51.47%), Query Frame = 1 

Query: 51  SVRPENDEKPVIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPE 110
           S   +N+   V+ L  +HGF+ +QIS +++ +PQ+L A+ EK+L PKL F QS+G SS E
Sbjct: 77  SFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSE 136

Query: 111 IAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQTVRPNVE 170
           I ++V   P IL +   + I   +D+I+  L   EK+  + K    +   +L+    NV 
Sbjct: 137 ITEIVSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKIRNVS 196

Query: 171 TLIQIGVPDSNIATIL--QYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRA 230
            L ++G+P   + ++L    QP   +    +F+E ++ V EMGF+P   KFV A+  +  
Sbjct: 197 VLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYK 256

Query: 231 MSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVA 290
           M++ T  +KV +YK  G+   ++  +F++ P  +  SE K+   ++ F+  +G      A
Sbjct: 257 MNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLG-LGFSRDEFA 316

Query: 291 KR----PAVITLSLKKRIVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHK 350
           K     P  I LS +   V +   + V      +K  V+ P VF  +    L+K I P  
Sbjct: 317 KMVKHFPPCIGLSTE--TVKKKTEFLVKKMNWPLKAVVSNPAVFGYS----LEKRIVPRG 371

Query: 351 ELIPGLL 352
            +I  L+
Sbjct: 377 NVIKALM 371

[Close]
BLAST of CmoCh13G003620 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25
Identity = 75/232 (32.33%), Postives = 131/232 (56.47%), Query Frame = 1 

Query: 43  KSASPDSNSVRPENDEKP--VIVLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLF 102
           K A   S  V  E+   P  V+ L  ++GF  +QIS +++ +P++L  + EK+L PKL F
Sbjct: 67  KLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQF 126

Query: 103 FQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQVLLQT-KEKAIASIKRSLGILT 162
            +S+G SS E+ ++V   P+IL +  +  +   +D+++ ++Q  K   I+  +   G   
Sbjct: 127 LKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEGKKG--- 186

Query: 163 WDLQTVRPNVETLIQIGVPDSNIATIL--QYQPRVFLVNTVRFKEIVEDVKEMGFNPLRL 222
                +R N+  L ++GVP   + ++L  +YQP   +    +F+E ++ V +MGF+P + 
Sbjct: 187 ---NRIR-NISVLRELGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKS 246

Query: 223 KFVLAVFAMRAMSKCTWRKKVEVYKKWGWPEEEILVAFRRHPWCMMASEDKI 270
           KFV A+  +  MS+ T  +KV VYK+ G+ E EI   F++ P+ +  SE KI
Sbjct: 247 KFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

[Close]
BLAST of CmoCh13G003620 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 493.4 bits (1269), Expect = 3.3e-136
Identity = 250/363 (68.87%), Postives = 308/363 (84.85%), Query Frame = 1 

Query: 3   LLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVI 62
           L RRI+++R PSSVF+HGFSESPLKSLR+ STSSEI SSPKSAS  SN+V+ EN+ K VI
Sbjct: 4   LFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVI 63

Query: 63  VLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSIL 122
            L  NHGFS++QIS++ ++ PQ+L+ANPEK LLPKLLFFQSKGLSSPEIAKLVC FP +L
Sbjct: 64  ELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVL 123

Query: 123 TRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQIGVPDSN 182
           T SL+++II  FDYIQ +L ++EK +A+IK+  GIL  DLQ +V PN+E L QIGVPDSN
Sbjct: 124 TGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSN 183

Query: 183 IATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVY 242
           I   LQYQPRVF+++++RFKEIVE V EMGFNP RL+F++AVFA+RAM+K TW KKVEVY
Sbjct: 184 ILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVY 243

Query: 243 KKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKR 302
           +KWG  EEEI +AF+RHPWCMM SEDKING MDFFVNKIGCE+S+VA+RPA+I+LSLKKR
Sbjct: 244 RKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 303 IVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHK-ELIPGLLKLYKEKLED 362
           + PRG+VYQVLL KGLIKK  N+P+   S+E RF++KFI+PHK E IPGLL+LYK+KL D
Sbjct: 304 LNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMD 363

Query: 363 AKR 364
           ++R
Sbjct: 364 SRR 366

[Close]
BLAST of CmoCh13G003620 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 4.3e-136
Identity = 249/362 (68.78%), Postives = 299/362 (82.60%), Query Frame = 1 

Query: 3   LLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVI 62
           L RRI+++R PSSVF+HGFSE PLKSLR+ STSSEI SSPKSAS  SN V+ +N+ K   
Sbjct: 4   LFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRKAAF 63

Query: 63  VLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSIL 122
             FENHGFS++QIS++ KKFPQ+LSANPEK LLPKLLFFQSKGLSSPEI KLVC FP +L
Sbjct: 64  SFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFPRVL 123

Query: 123 TRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQIGVPDSN 182
             SLD +IIPAFDYIQ +L ++EK +A IK    ILT DL+ +V PN+E L QIGVPDSN
Sbjct: 124 AGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVPDSN 183

Query: 183 IATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVY 242
           I    QYQPRVF  N++RFKE VE V EMGFNP RL+F++AVFA+RAM+K TW KKVEVY
Sbjct: 184 ILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVY 243

Query: 243 KKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKR 302
           +KWG  EEEI +AF+RHPWCMM SEDKING MDFFVNKIGCE+S+VA+RPA+I+LSLKKR
Sbjct: 244 RKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 303 IVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLEDA 362
           + PRG+VYQVLL KGLIKK  N+P+   S+E+RF+DKFI+PHKE IPGLL+ Y++KL D+
Sbjct: 304 LNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKLMDS 363

Query: 363 KR 364
           +R
Sbjct: 364 RR 365

[Close]
BLAST of CmoCh13G003620 vs. NCBI nr
Match: gi|659076748|ref|XP_008438847.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 6.3e-135
Identity = 245/362 (67.68%), Postives = 301/362 (83.15%), Query Frame = 1 

Query: 3   LLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVI 62
           L RRI+++R PSSVF+HGFSE PLKSLR+ STSSEI SSPKSAS  SN V+ +N+ K   
Sbjct: 4   LFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRKAAF 63

Query: 63  VLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSIL 122
             FENHGFS++QIS++ KKFPQ+LSANPEK LLPKLLFFQSKGLSSPEI KLVC +P  L
Sbjct: 64  SFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCLYPWAL 123

Query: 123 TRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQT-VRPNVETLIQIGVPDSN 182
             SL++++IPAFDYIQ +  +KEKA+A+IK+  GIL +DL+  V PN+E L QIGVPDSN
Sbjct: 124 RASLNKRMIPAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVPDSN 183

Query: 183 IATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVY 242
           I   LQY+PRVFL N +RFKEIVE   EMGFNP +L+F++AVF +R+M+K TW KKVEVY
Sbjct: 184 IFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKVEVY 243

Query: 243 KKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKR 302
           +KWG  EEEI +AFR+HPWCMM SEDKING MDFFVNKIGCE+S+VA+RPA+I+LSLKKR
Sbjct: 244 RKWGLSEEEIRLAFRKHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 303 IVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLEDA 362
           + PRG+VYQVLL KGLIKK  N+P+   S+E+RF+DKFI+PHKE IPGLL+ Y++KL D+
Sbjct: 304 LNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKLMDS 363

Query: 363 KR 364
           +R
Sbjct: 364 RR 365

[Close]
BLAST of CmoCh13G003620 vs. NCBI nr
Match: gi|659077777|ref|XP_008439380.1| (PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134
Identity = 249/362 (68.78%), Postives = 301/362 (83.15%), Query Frame = 1 

Query: 3   LLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVI 62
           L RR I++R  SSVF+HGFSE PLKSLRY STSS+I SSP SA   SN+++ +N  K VI
Sbjct: 4   LFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAVI 63

Query: 63  VLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSIL 122
            L  +HGFS++QIS+L K+FPQ+LSANPEK+LLPKLLFFQSKGLSSPEI KLVC FP +L
Sbjct: 64  ALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVL 123

Query: 123 TRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQIGVPDSN 182
           T SLD++IIPAFDYIQ +L ++EK +ASIK+  GIL  DL+ +  PN+E L QIGVPDSN
Sbjct: 124 TGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSN 183

Query: 183 IATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVY 242
           I   LQYQPRVFL+N VRFKE VE V EMGFNP +L+FV+AVF +RAM+K TW KKVEVY
Sbjct: 184 IFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVY 243

Query: 243 KKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKR 302
           +KWG  EEEIL+AFRRHPW MM SEDKING MDFFVNK+GCE S+ A+RP +++LSLKKR
Sbjct: 244 RKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKR 303

Query: 303 IVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLEDA 362
           I+PRG+VYQVLLSKGLIKK  NL + FES+E+ F++KFI+PHKE IPGLL+LYK+KL D+
Sbjct: 304 ILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDS 363

Query: 363 KR 364
           +R
Sbjct: 364 RR 365

[Close]
BLAST of CmoCh13G003620 vs. NCBI nr
Match: gi|659076750|ref|XP_008438848.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 5.9e-133
Identity = 244/362 (67.40%), Postives = 297/362 (82.04%), Query Frame = 1 

Query: 3   LLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSEIASSPKSASPDSNSVRPENDEKPVI 62
           + RRI+++R PS VF  GFS+SPLKSLRY STSSEI SSP+SA   SN+V+ +N  K VI
Sbjct: 4   VFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRKAVI 63

Query: 63  VLFENHGFSKTQISELVKKFPQVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSIL 122
            L  +HGFS++QIS + K++PQ+LSANPEK LLPKLLFFQSKGLSSPEIAKLVC FP +L
Sbjct: 64  ALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFPRVL 123

Query: 123 TRSLDRKIIPAFDYIQVLLQTKEKAIASIKRSLGILTWDLQ-TVRPNVETLIQIGVPDSN 182
             SLD +IIPAFDYIQ +L ++EK +A IK    ILT DL+ +V PN+E L QIGVPDSN
Sbjct: 124 AGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVPDSN 183

Query: 183 IATILQYQPRVFLVNTVRFKEIVEDVKEMGFNPLRLKFVLAVFAMRAMSKCTWRKKVEVY 242
           I    QYQPRVF  N++RFKE VE V EMGFNP RL+F++AVFA+RAM+K TW KKVEVY
Sbjct: 184 ILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVY 243

Query: 243 KKWGWPEEEILVAFRRHPWCMMASEDKINGIMDFFVNKIGCETSYVAKRPAVITLSLKKR 302
           +KWG  EEEI +AF+RHPWCMM SEDKING MDFFVNKIGCE+S+VA+RPA+I+LSLKKR
Sbjct: 244 RKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKR 303

Query: 303 IVPRGFVYQVLLSKGLIKKDVNLPMVFESTESRFLDKFIDPHKELIPGLLKLYKEKLEDA 362
           + PRG+VYQVLL KGLIKK  N+P+   S+E+RF+DKFI+PHKE IPGLL+ Y++KL D+
Sbjct: 304 LNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKLMDS 363

Query: 363 KR 364
           +R
Sbjct: 364 RR 365

The following BLAST results are available for this feature:
BLAST of CmoCh13G003620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF5_ARATH7.2e-0624.21Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of CmoCh13G003620 vs. TrEMBL
Match NameE-valueIdentityDescription
A5C3X9_VITVI1.7e-8653.68Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1[more]
F6HDG2_VITVI2.2e-8653.16Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=... [more]
A5C3Y0_VITVI8.4e-8652.02Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1[more]
F6HDG3_VITVI8.4e-8652.76Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=... [more]
B9RG71_RICCO3.6e-8149.39Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451930 PE=4 SV=1[more]
BLAST of CmoCh13G003620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.13.4e-6239.62 Mitochondrial transcription termination factor family protein[more]
AT1G21150.12.4e-5233.84 Mitochondrial transcription termination factor family protein[more]
AT5G64950.11.7e-3731.15 Mitochondrial transcription termination factor family protein[more]
AT1G61970.11.9e-2530.29 Mitochondrial transcription termination factor family protein[more]
AT3G46950.12.5e-2532.33 Mitochondrial transcription termination factor family protein[more]
BLAST of CmoCh13G003620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077781|ref|XP_008439382.1|3.3e-13668.87PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo][more]
gi|659076738|ref|XP_008438842.1|4.3e-13668.78PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo][more]
gi|659076748|ref|XP_008438847.1|6.3e-13567.68PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo][more]
gi|659077777|ref|XP_008439380.1|1.1e-13468.78PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo][more]
gi|659076750|ref|XP_008438848.1|5.9e-13367.40PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G003620.1CmoCh13G003620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 64..220
score: 1.1E-22coord: 229..335
score: 6.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 252..283
score: 4.0coord: 148..178
score: 1600.0coord: 183..213
score: 670.0coord: 76..107
score: 1.9E-5coord: 284..318
score: 7.0coord: 112..143
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 41..359
score: 5.6E
NoneNo IPR availablePANTHERPTHR13068:SF28MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATEDcoord: 41..359
score: 5.6E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G003620Cucurbita pepo (Zucchini)cmocpeB180
CmoCh13G003620Bottle gourd (USVL1VR-Ls)cmolsiB194
CmoCh13G003620Cucumber (Gy14) v2cgybcmoB072
CmoCh13G003620Cucumber (Chinese Long) v3cmocucB0239
CmoCh13G003620Watermelon (97103) v2cmowmbB192
CmoCh13G003620Cucurbita moschata (Rifu)cmocmoB167
CmoCh13G003620Cucumber (Gy14) v1cgycmoB0880
CmoCh13G003620Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G003620Cucurbita maxima (Rimu)cmacmoB395
CmoCh13G003620Wild cucumber (PI 183967)cmocpiB208
CmoCh13G003620Cucumber (Chinese Long) v2cmocuB206
CmoCh13G003620Watermelon (Charleston Gray)cmowcgB171
CmoCh13G003620Watermelon (97103) v1cmowmB189