CmoCh13G003240 (gene) Cucurbita moschata (Rifu)

BLAST of CmoCh13G003240 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 578.9 bits (1491), Expect = 1.6e-163
Identity = 343/910 (37.69%), Postives = 495/910 (54.40%), Query Frame = 1

Query: 640  VVLLQEFEHLFSEEMPSSLPPLRGI--EHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVS 699
            V L Q++  +   ++P     +  I  +H I+  PGA +P    Y    K  +EI + V 
Sbjct: 584  VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 643

Query: 700  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 759
            +LL   ++  S SPCS PV+LVPKKDG++R+CVD R +NK TI    P+PR+D++L  + 
Sbjct: 644  KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 703

Query: 760  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 819
               +FT +DL SGYHQI M   D +KTAF T  G YE+ VMPFGL NAPSTF R M    
Sbjct: 704  NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 763

Query: 820  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 879
            R+   +FV VY DDIL++S+S ++H  H+  VL  L+NE L V  KKC F  E+  FLG+
Sbjct: 764  RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 823

Query: 880  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 939
             +    +   + K  AI+D+PTPK V + + F G+ ++YRRFI N S IA P+   +   
Sbjct: 824  SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 883

Query: 940  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVL--MQNQRPLM 999
                W + Q+ A   LK  L ++P+L   N ++ + +  DAS  GIGAVL  + N+  L+
Sbjct: 884  SQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 943

Query: 1000 ----FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNK 1059
                +FS+ L  A   YP  + EL  +++AL  +++ L  K F + TDH SL  L+ +N+
Sbjct: 944  GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNE 1003

Query: 1060 LNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE--------- 1119
              RR  +WL+ + T+ + ++Y  G +N+VADA+SR    +    +R +  E         
Sbjct: 1004 PARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSD 1063

Query: 1120 --------HIKDLYQHDMF------FAPFVESCEKG-LIVDNYLLLDGFLFRKGKLCIPS 1179
                    H+K+L QH++       F  + +  E       NY L D  ++ + +L +P 
Sbjct: 1064 PLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP- 1123

Query: 1180 CSIRELLVREAHGGGLMA-HHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKT-R 1239
               +  ++R  H   L   H GV+ T   +S  ++WPK++H + +    C+ C+  K+ R
Sbjct: 1124 IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHR 1183

Query: 1240 LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDA 1299
             + HGL  PLP+  G W+DISMDFV GLP T    + I VVVDRFSK AHFI   KT DA
Sbjct: 1184 PRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDA 1243

Query: 1300 KHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTE 1359
              + DL FR +   HG P++I SDRDV+  +  ++ L  +LG K   S+  HPQTDGQ+E
Sbjct: 1244 TQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSE 1303

Query: 1360 VVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLL 1419
               +T+  +LRA +  N++ W   LP IEF YN     T   +PFEI  G+ P TP    
Sbjct: 1304 RTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP---- 1363

Query: 1420 PIPSKEFVNFDANAKVEFVHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVW 1479
             I S + VN  +   VE    L     Q KEQ+E    ++ T  N+ RK ++   GD V 
Sbjct: 1364 AIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVL 1423

Query: 1480 VHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSPLDGS 1513
            VH R   F      KV     GPF+V+++INDNAY++DL S        NV  L  L   
Sbjct: 1424 VH-RDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKSLYTV 1483

BLAST of CmoCh13G003240 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 578.6 bits (1490), Expect = 2.1e-163
Identity = 338/891 (37.93%), Postives = 490/891 (54.99%), Query Frame = 1

Query: 640  VVLLQEFEHLFSEEMPSSLPPLRGI--EHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVS 699
            V L Q++  +   ++P     +  I  +H I+  PGA +P    Y    K  +EI + V 
Sbjct: 558  VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 617

Query: 700  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 759
            +LL   ++  S SPCS PV+LVPKKDG++R+CVD R +NK TI    P+PR+D++L  + 
Sbjct: 618  KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 677

Query: 760  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 819
               +FT +DL SGYHQI M   D +KTAF T  G YE+ VMPFGL NAPSTF R M    
Sbjct: 678  NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 737

Query: 820  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 879
            R+   +FV VY DDIL++S+S ++H  H+  VL  L+NE L V  KKC F  E+  FLG+
Sbjct: 738  RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 797

Query: 880  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 939
             +    +   + K  AI+D+PTPK V + + F G+ ++YRRFI N S IA P+   +   
Sbjct: 798  SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 857

Query: 940  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVL--MQNQRPLM 999
                W + Q+ A + LK+ L ++P+L   N ++ + +  DAS  GIGAVL  + N+  L+
Sbjct: 858  SQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 917

Query: 1000 ----FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNK 1059
                +FS+ L  A   YP  + EL  +++AL  +++ L  K F + TDH SL  L+ +N+
Sbjct: 918  GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNE 977

Query: 1060 LNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE--------- 1119
              RR  +WL+ + T+ + ++Y  G +N+VADA+SR    +    +R +  E         
Sbjct: 978  PARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSD 1037

Query: 1120 --------HIKDLYQHDMF------FAPFVESCEKG-LIVDNYLLLDGFLFRKGKLCIPS 1179
                    H+K+L QH++       F  + +  E       NY L D  ++ + +L +P 
Sbjct: 1038 PLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP- 1097

Query: 1180 CSIRELLVREAHGGGLMA-HHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKT-R 1239
               +  ++R  H   L   H GV+ T   +S  ++WPK++H + +    C+ C+  K+ R
Sbjct: 1098 IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHR 1157

Query: 1240 LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDA 1299
             + HGL  PLP+  G W+DISMDFV GLP T    + I VVVDRFSK AHFI   KT DA
Sbjct: 1158 PRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDA 1217

Query: 1300 KHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTE 1359
              + DL FR +   HG P++I SDRDV+  +  ++ L  +LG K   S+  HPQTDGQ+E
Sbjct: 1218 TQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSE 1277

Query: 1360 VVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLL 1419
               +T+  +LRA    N++ W   LP IEF YN     T   +PFEI  G+ P TP    
Sbjct: 1278 RTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP---- 1337

Query: 1420 PIPSKEFVNFDANAKVEFVHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVW 1479
             I S + VN  +   VE    L     Q KEQ+E    ++ T  N+ RK ++   GD V 
Sbjct: 1338 AIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVL 1397

Query: 1480 VHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPSKYGVSAAFNV 1494
            VH R   F      KV     GPF+V+++INDNAY++DL S        NV
Sbjct: 1398 VH-RDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINV 1438

BLAST of CmoCh13G003240 vs. Swiss-Prot
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.9e-143
Identity = 303/900 (33.67%), Postives = 486/900 (54.00%), Query Frame = 1

Query: 633  PSLPSDFVVLLQEFEHLFSEEMPSSLP-PLRGIEHKIDFIPG---APIPNRPAYRTNPKE 692
            P LP     + +EF+ + +E     LP P++G+E +++        PI N P     P +
Sbjct: 372  PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL---PPGK 431

Query: 693  AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 752
             + +  ++++ L  G +RES +  + PV+ VPKK+G+ RM VD + +NK      +P+P 
Sbjct: 432  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491

Query: 753  LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST 812
            ++ +L ++ G ++FTK+DLKS YH IR+  GDE K AF+   G++E+LVMP+G++ AP+ 
Sbjct: 492  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551

Query: 813  FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 872
            F   +N +L E     VV Y DDIL++SKS  +H+ HV++VL  L+N  L +N  KC F 
Sbjct: 552  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611

Query: 873  MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 932
              +V F+G+ +S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  
Sbjct: 612  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671

Query: 933  PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLM 992
            PLN L+KK+V + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL 
Sbjct: 672  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731

Query: 993  QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 1052
            Q        P+ ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH 
Sbjct: 732  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791

Query: 1053 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 1112
            +L   R+ N+    N+R A+W  F++ F + I Y+ G  N +ADALSR            
Sbjct: 792  NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851

Query: 1113 ---RYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 1172
                   +N ++        +   Y +D      + + +K  + +N  L DG L   K +
Sbjct: 852  EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911

Query: 1173 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQ 1232
            + +P+   +   ++++ H  G + H G+    +++   F W  +R  + +    C  C+ 
Sbjct: 912  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971

Query: 1233 AKTR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 1292
             K+R  +P+G   P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC 
Sbjct: 972  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031

Query: 1293 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 1352
            K+  A+  A +F + V+   G PK I++D D  F S  W+    K    + +S    PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091

Query: 1353 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-L 1412
            DGQTE  N+T+  +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151

Query: 1413 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1472
            +P++L     K   N     +V       + VKE +   N K+    + K ++I  F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211

Query: 1473 DWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPS--KYGVSAAFNVVDL 1497
            D V V   K  F   + +K+ P   GPF VL++   N Y++DLP   K+  S+ F+V  L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

BLAST of CmoCh13G003240 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.9e-143
Identity = 303/900 (33.67%), Postives = 486/900 (54.00%), Query Frame = 1

Query: 633  PSLPSDFVVLLQEFEHLFSEEMPSSLP-PLRGIEHKIDFIPG---APIPNRPAYRTNPKE 692
            P LP     + +EF+ + +E     LP P++G+E +++        PI N P     P +
Sbjct: 372  PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL---PPGK 431

Query: 693  AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 752
             + +  ++++ L  G +RES +  + PV+ VPKK+G+ RM VD + +NK      +P+P 
Sbjct: 432  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491

Query: 753  LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST 812
            ++ +L ++ G ++FTK+DLKS YH IR+  GDE K AF+   G++E+LVMP+G++ AP+ 
Sbjct: 492  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551

Query: 813  FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 872
            F   +N +L E     VV Y DDIL++SKS  +H+ HV++VL  L+N  L +N  KC F 
Sbjct: 552  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611

Query: 873  MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 932
              +V F+G+ +S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  
Sbjct: 612  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671

Query: 933  PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLM 992
            PLN L+KK+V + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL 
Sbjct: 672  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731

Query: 993  QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 1052
            Q        P+ ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH 
Sbjct: 732  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791

Query: 1053 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 1112
            +L   R+ N+    N+R A+W  F++ F + I Y+ G  N +ADALSR            
Sbjct: 792  NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851

Query: 1113 ---RYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 1172
                   +N ++        +   Y +D      + + +K  + +N  L DG L   K +
Sbjct: 852  EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911

Query: 1173 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQ 1232
            + +P+   +   ++++ H  G + H G+    +++   F W  +R  + +    C  C+ 
Sbjct: 912  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971

Query: 1233 AKTR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 1292
             K+R  +P+G   P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC 
Sbjct: 972  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031

Query: 1293 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 1352
            K+  A+  A +F + V+   G PK I++D D  F S  W+    K    + +S    PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091

Query: 1353 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-L 1412
            DGQTE  N+T+  +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151

Query: 1413 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1472
            +P++L     K   N     +V       + VKE +   N K+    + K ++I  F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211

Query: 1473 DWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPS--KYGVSAAFNVVDL 1497
            D V V   K  F   + +K+ P   GPF VL++   N Y++DLP   K+  S+ F+V  L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

BLAST of CmoCh13G003240 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.9e-143
Identity = 303/900 (33.67%), Postives = 486/900 (54.00%), Query Frame = 1

Query: 633  PSLPSDFVVLLQEFEHLFSEEMPSSLP-PLRGIEHKIDFIPG---APIPNRPAYRTNPKE 692
            P LP     + +EF+ + +E     LP P++G+E +++        PI N P     P +
Sbjct: 372  PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL---PPGK 431

Query: 693  AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 752
             + +  ++++ L  G +RES +  + PV+ VPKK+G+ RM VD + +NK      +P+P 
Sbjct: 432  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491

Query: 753  LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST 812
            ++ +L ++ G ++FTK+DLKS YH IR+  GDE K AF+   G++E+LVMP+G++ AP+ 
Sbjct: 492  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551

Query: 813  FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 872
            F   +N +L E     VV Y DDIL++SKS  +H+ HV++VL  L+N  L +N  KC F 
Sbjct: 552  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611

Query: 873  MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 932
              +V F+G+ +S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  
Sbjct: 612  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671

Query: 933  PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLM 992
            PLN L+KK+V + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL 
Sbjct: 672  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731

Query: 993  QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 1052
            Q        P+ ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH 
Sbjct: 732  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791

Query: 1053 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 1112
            +L   R+ N+    N+R A+W  F++ F + I Y+ G  N +ADALSR            
Sbjct: 792  NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851

Query: 1113 ---RYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 1172
                   +N ++        +   Y +D      + + +K  + +N  L DG L   K +
Sbjct: 852  EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911

Query: 1173 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQ 1232
            + +P+   +   ++++ H  G + H G+    +++   F W  +R  + +    C  C+ 
Sbjct: 912  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971

Query: 1233 AKTR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 1292
             K+R  +P+G   P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC 
Sbjct: 972  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031

Query: 1293 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 1352
            K+  A+  A +F + V+   G PK I++D D  F S  W+    K    + +S    PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091

Query: 1353 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-L 1412
            DGQTE  N+T+  +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151

Query: 1413 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1472
            +P++L     K   N     +V       + VKE +   N K+    + K ++I  F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211

Query: 1473 DWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPS--KYGVSAAFNVVDL 1497
            D V V   K  F   + +K+ P   GPF VL++   N Y++DLP   K+  S+ F+V  L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1254

BLAST of CmoCh13G003240 vs. TrEMBL
Match: A4K7M3_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica PE=4 SV=1)

HSP 1 Score: 1645.9 bits (4261), Expect = 0.0e+00
Identity = 824/1519 (54.25%), Postives = 1069/1519 (70.38%), Query Frame = 1

Query: 76   GPGLMRGRDHGRRYHNLQQRVPYDDRIDRN--------------VGSIKLKLPKFYGKTD 135
            G G  RGR+HG       + V    R DR                G +K  +PKF G +D
Sbjct: 93   GRGADRGREHGLEESGTDEEVEQPHRDDRRHRGNRGRNQPNEERFGKLKFTMPKFEGGSD 152

Query: 136  PEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWV 195
            PE YL WE  V+ +F  HN+S+ KKV +   +F  YA IWW+++++ R    +  + SW 
Sbjct: 153  PEVYLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQMLNEREEAGQGDVRSWA 212

Query: 196  EFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARF 255
            E K  MR RFVP++++RD+  KLQ LKQG  SV++YYKEM+  M R  + ED E  +ARF
Sbjct: 213  EMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQSIARF 272

Query: 256  LNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQR--RSQRYSSKTFPNSTSTWKKDSK 315
            ++GL+  I    + Q Y N+ EL+H A K ERQ+Q+  +S R  S +  N+ S  K  S+
Sbjct: 273  MSGLHRNIQRIVEFQQYRNLIELVHQASKAERQLQQDMKSNRGVSFSTKNAASGSKFTSR 332

Query: 316  NIDYK-------------HRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLKCWRC 375
                +             +      +   A  E+  ++ T    V  S+ ++  ++C++C
Sbjct: 333  GSGNRGAFSSSSGGARSSNYGTSSGKDLAAPNERKNAANTSSTSVG-SSTKSSGIQCFKC 392

Query: 376  QGVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEETDESEEFSEEDPTHISLVTRRAL 435
             G GH +R+CPN R + + + GE  +  E   + +EE +  E+   E  +  +LV  + L
Sbjct: 393  GGRGHVARECPNNRTIVVNDQGEYESTSEEEQEDSEEENNLEKDICEFESGAALVVTQIL 452

Query: 436  NTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYK 495
            +  + +    QR NLFQTR  VQ     V+ID GSC N+ S  +V++L LK   HP PY 
Sbjct: 453  SVQMSDAENGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLKLLKHPHPYH 512

Query: 496  LQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYAN 555
            +QWLN+ G +++ Q+  V F IG+Y+D + CDV  M V  +LLGRPWQ+DR  ++ G  N
Sbjct: 513  VQWLNNSGSIKIAQRVKVPFKIGEYIDTMECDVAPMTVCHMLLGRPWQYDRSSLHCGRTN 572

Query: 556  RYSFTHNGRKTTLIPLSPKDVFIDHC-KLEKKRQEADAKAEIEKESSEKKSLSEKQESNT 615
            +Y+    G++  L P++P+ +  +H  K  + R E+  + +    S+  KS+SE  + N 
Sbjct: 573  QYTIKWKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKNNLSAPHKSVSESHKPNM 632

Query: 616  QPREKKERKAKSVSLYVRSSEARNVLLS-NQTILVLMCKGSCYFTNMLNPSLPSDFVVLL 675
              R+ K+R+ +++ +    SE R+V  +  Q + +L+CK +    N L  S+PS    +L
Sbjct: 633  --RDNKKREGENLVMIATKSEMRDVRRNPEQVLFILVCKDTLLSANDLT-SVPSVVARVL 692

Query: 676  QEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKG 735
            QE+E +F EE P  LPPLRGIEH+ID IPGA +PNRPAYRTNP+E +EIQRQV  LL KG
Sbjct: 693  QEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKG 752

Query: 736  YVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFT 795
            YVRESLSPC+VPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLDEL G  +F+
Sbjct: 753  YVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFS 812

Query: 796  KIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGK 855
            KIDL+SG+HQIRM IGDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR ++GK
Sbjct: 813  KIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGK 872

Query: 856  FVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNG 915
            FVVVYFDDIL+YSK+L++H+ H++ VL  LR E LY NL+KC+FC ++V FLGFVVS  G
Sbjct: 873  FVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLG 932

Query: 916  VEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWE 975
            ++VDE KVKAIKDWPTP+NVS+V+SF GLA FYRRF++ FSTIA+PLNEL KK V+F W 
Sbjct: 933  IQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWG 992

Query: 976  KDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLMQNQRPLMFFSEKLTG 1035
            + QE AF  LK++LS  PLL LP+F   FE+ECDASG+GIG VLMQN +P+ +FSEKL G
Sbjct: 993  EPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGG 1052

Query: 1036 ASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFI 1095
            A L Y  YDKELYALVRAL+TWQHYLWPKEF+IH+DHE+LK+L+ Q KLNRRHAKW+EFI
Sbjct: 1053 AQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFI 1112

Query: 1096 ETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEK 1155
            ETFPYV+KYK+GKENIVADALSR+ VLLN L  ++ G E IK+LY  D+ F+     C  
Sbjct: 1113 ETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTA 1172

Query: 1156 GLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWP 1215
            G   + Y + DGFLFR  KLC+P CS+R LL++E H GGLM H G  KTYDML++HF+WP
Sbjct: 1173 GKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWP 1232

Query: 1216 KMRHDVHKVCARCIACKQAKTRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSI 1275
            KMR DV ++  RC+ C +AK++L PHGLY+PLPVP+ PW DISMDFVLGLPRT++G DSI
Sbjct: 1233 KMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSI 1292

Query: 1276 FVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLW 1335
            FVVVDRFSKMAHFIPCHK+DDA HIA LFF E+VRLHG+PK+IVSDRD KFLS+FW+ LW
Sbjct: 1293 FVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLW 1352

Query: 1336 GKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHS 1395
             KLGT+L++STTCHPQTDGQTEVVNRT++ +LRA+I KNLK WE+CLP +EFAYNR VHS
Sbjct: 1353 AKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHS 1412

Query: 1396 TTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVA 1455
            TT   PFE+VYGF PL+PIDLLP+P +E  + +A+ +  +V K+H++ KE IEK++   A
Sbjct: 1413 TTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYA 1472

Query: 1456 TRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPS 1515
               NK RK V F+PGD VWVH RK+RFP +RKSK++PRGDGPF+VL +INDNAYKI+LP 
Sbjct: 1473 AWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPE 1532

Query: 1516 KYGVSAAFNVVDLSPLDG-SDGLDSRMNPSQEGEND-----MNHDQGISIP--------Q 1549
             YGVS+ FNV DL+P  G  D   SR  P QEGE+D     ++       P        Q
Sbjct: 1533 DYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQ 1592

BLAST of CmoCh13G003240 vs. TrEMBL
Match: Q5NRP4_SOLDE (Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_58t00004 PE=4 SV=1)

HSP 1 Score: 1632.5 bits (4226), Expect = 0.0e+00
Identity = 821/1520 (54.01%), Postives = 1069/1520 (70.33%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLN EIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLK 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG     GK    KS+  +  ++
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKG-----GKTFNPKSSKPSSSIQ 350

Query: 343  CWRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL--- 402
            C +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +     
Sbjct: 351  CHKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGI 410

Query: 403  --VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 462
              V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +  
Sbjct: 411  IGVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIAC 470

Query: 463  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 522
                 PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR 
Sbjct: 471  MKRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRD 530

Query: 523  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KES 582
              + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E 
Sbjct: 531  TTHHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEI 590

Query: 583  SEKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQ 642
             +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N      
Sbjct: 591  EKKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGL 650

Query: 643  TILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGA 702
             I++L  K        L PSLP+    LLQ FE +F ++ P  LPPLRGIEH+IDF+PG+
Sbjct: 651  PIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGS 710

Query: 703  PIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRA 762
             +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRA
Sbjct: 711  QLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRA 770

Query: 763  INKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYE 822
            INKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAFKTKYGLYE
Sbjct: 771  INKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYE 830

Query: 823  WLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLR 882
            WLVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LR
Sbjct: 831  WLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLR 890

Query: 883  NECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLAS 942
            N+ L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLAS
Sbjct: 891  NQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLAS 950

Query: 943  FYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEI 1002
            FYRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F   FE+
Sbjct: 951  FYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEV 1010

Query: 1003 ECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEF 1062
            ECDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                
Sbjct: 1011 ECDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL---------------- 1070

Query: 1063 IIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTL 1122
                          Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL
Sbjct: 1071 -------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTL 1130

Query: 1123 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELL 1182
             ++LLGF+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL 
Sbjct: 1131 TSKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELF 1190

Query: 1183 VREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSP 1242
            VREAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAK+R  PHGLY+P
Sbjct: 1191 VREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTP 1250

Query: 1243 LPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFR 1302
            LPV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +
Sbjct: 1251 LPVSNSPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVK 1310

Query: 1303 EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAM 1362
            EVV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  M
Sbjct: 1311 EVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNM 1370

Query: 1363 LRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVN 1422
            LRAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N
Sbjct: 1371 LRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFAN 1430

Query: 1423 FDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQR 1482
             D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++R
Sbjct: 1431 LDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKR 1490

Query: 1483 KSKVLPRGDGPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSPLDGSDGLDSRMNPSQE 1542
            K+K+ PRG GP++VLERI DNAYK+DLP ++ VSA FNV DLS  D    LDSR N  QE
Sbjct: 1491 KTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDAD--LDSRTNSLQE 1550

Query: 1543 GEND---------MNHDQGISIPQGPITRTKAKKLQQT---LYSYIQAMVSSSKKILEDV 1579
              ND          + D  +  P+ PITR++ K+       L S IQ  +   +++    
Sbjct: 1551 EGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKG 1587

BLAST of CmoCh13G003240 vs. TrEMBL
Match: Q5NRP7_SOLDE (Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_58t00003 PE=4 SV=1)

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 821/1520 (54.01%), Postives = 1069/1520 (70.33%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLN EIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLK 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG     GK    KS+  +  ++
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKG-----GKTFNPKSSKPSSSIQ 350

Query: 343  CWRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL--- 402
            C +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +     
Sbjct: 351  CHKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGI 410

Query: 403  --VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 462
              V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +  
Sbjct: 411  IGVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIAC 470

Query: 463  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 522
                 PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR 
Sbjct: 471  MKRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRD 530

Query: 523  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KES 582
              + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E 
Sbjct: 531  TTHHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEI 590

Query: 583  SEKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQ 642
             +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N      
Sbjct: 591  EKKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGL 650

Query: 643  TILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGA 702
             I++L  K        L PSLP+    LLQ FE +F ++ P  LPPLRGIEH+IDF+PG+
Sbjct: 651  PIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGS 710

Query: 703  PIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRA 762
             +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRA
Sbjct: 711  QLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRA 770

Query: 763  INKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYE 822
            INKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAFKTKYGLYE
Sbjct: 771  INKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYE 830

Query: 823  WLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLR 882
            WLVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LR
Sbjct: 831  WLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLR 890

Query: 883  NECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLAS 942
            N+ L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLAS
Sbjct: 891  NQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLAS 950

Query: 943  FYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEI 1002
            FYRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F   FE+
Sbjct: 951  FYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEV 1010

Query: 1003 ECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEF 1062
            ECDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                
Sbjct: 1011 ECDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL---------------- 1070

Query: 1063 IIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTL 1122
                          Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL
Sbjct: 1071 -------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTL 1130

Query: 1123 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELL 1182
             ++LLGF+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL 
Sbjct: 1131 TSKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELF 1190

Query: 1183 VREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSP 1242
            VREAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAK+R  PHGLY+P
Sbjct: 1191 VREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTP 1250

Query: 1243 LPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFR 1302
            LPV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +
Sbjct: 1251 LPVSNFPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVK 1310

Query: 1303 EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAM 1362
            EVV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  M
Sbjct: 1311 EVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNM 1370

Query: 1363 LRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVN 1422
            LRAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N
Sbjct: 1371 LRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFAN 1430

Query: 1423 FDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQR 1482
             D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++R
Sbjct: 1431 LDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKR 1490

Query: 1483 KSKVLPRGDGPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSPLDGSDGLDSRMNPSQE 1542
            K+K+ PRG GP++VLERI DNAYK+DLP ++ VSA FNV DLS  D    LDSR N  QE
Sbjct: 1491 KTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDAD--LDSRTNSLQE 1550

Query: 1543 GEND---------MNHDQGISIPQGPITRTKAKKLQQT---LYSYIQAMVSSSKKILEDV 1579
              ND          + D  +  P+ PITR++ K+       L S IQ  +   +++    
Sbjct: 1551 EGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKG 1587

BLAST of CmoCh13G003240 vs. TrEMBL
Match: Q8L7J3_MAIZE (Gag-pol polyprotein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 1620.1 bits (4194), Expect = 0.0e+00
Identity = 812/1523 (53.32%), Postives = 1043/1523 (68.48%), Query Frame = 1

Query: 65   SDHHEDNPHAVGPGLMRGRDHGRRYHNLQQRVPYDDRIDRNVGSIKLKLPKFYGKTDPEE 124
            +D  +D+  A  P   R R + R      +R  + +  D     +K K+P F GK DP+ 
Sbjct: 107  ADTEQDDQEA--PNRRRLRTNRRGMGGFHRREVHGN--DDAFSKVKFKIPPFDGKYDPDA 166

Query: 125  YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
            Y+ WE  V+  F CH F +  +V    ++F ++A +WW   +   ++N      +W   K
Sbjct: 167  YITWEIAVDQKFACHEFPENARVRAATSEFTEFASVWW---IEHGKKNPNNMPQTWDALK 226

Query: 185  ESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNG 244
              MR RFVP Y+ RDM  KLQ L+QG KSVE+YY+E+   M R  ++E  E+ MARFL G
Sbjct: 227  RVMRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGG 286

Query: 245  LNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPNSTSTWKK-------- 304
            LN EI D    + Y+N+  L H+A K ER++Q R     S      ++ W++        
Sbjct: 287  LNREIQDILAYKDYANVTRLFHLACKAEREVQGRRASARSNVSAGKSTPWQQRTTTSMTG 346

Query: 305  ----DSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNV----RNRDLKCWRCQG 364
                 + +          ++KP+A      +    K     S+V    R RD+ C+RC+G
Sbjct: 347  RTLAPTPSPSRPAPPPSSSDKPRASSTNSATKSAQKPAGSASSVASTGRTRDVLCYRCKG 406

Query: 365  VGHYSRDCPNARIMTIKEGEIVTD----DEAH------DDINEETDESEEFSEEDPTHI- 424
             GH  RDCPN R++ +K+    +     DEA       DD   +    E+   +D  H  
Sbjct: 407  YGHVQRDCPNQRVLVVKDDGGYSSASDLDEATLALLAADDAGTKEPPEEQIGADDAEHYE 466

Query: 425  SLVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 484
            SL+ +R L+  +++   +QR  LFQT+C+++   C ++ID GSC N+ SS +V++L L T
Sbjct: 467  SLIVQRVLSAQMEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTT 526

Query: 485  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 544
            +PHP PY +QWLN+ G+V+VT+   ++F IG Y D V CDVV M   ++LLGRPWQFD  
Sbjct: 527  KPHPHPYHIQWLNNSGKVKVTKLVRINFAIGSYRDVVDCDVVPMDACNILLGRPWQFDSD 586

Query: 545  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLS 604
             M+ G +N+YS  H+ +K  L+P+SP+ +  D            AKA   K  + K    
Sbjct: 587  CMHHGRSNQYSLIHHDKKIILLPMSPEAIVRDDV----------AKATKAKTENNK---- 646

Query: 605  EKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCKGSCYFTNMLNPSLPS 664
                       K   K K   L    ++   +  S      L+CK +      +  SLP 
Sbjct: 647  ---NIKVVGNNKDGIKLKGHCLLATKTDVNELFASTTVAYALVCKDALISIQDMQHSLPP 706

Query: 665  DFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVS 724
                +LQE+  +F  E+P  LPP+RGIEH+ID IPGA +PNR  YRTNP+E +EIQRQV 
Sbjct: 707  VITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQ 766

Query: 725  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 784
            ELL KGYVRESLSPC+VPVILVPKKDG+WRMCVDCRAIN ITI+YRHPIPRLDDMLDEL 
Sbjct: 767  ELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELS 826

Query: 785  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 844
            G  +F+K+DL+SGYHQIRM +GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VL
Sbjct: 827  GAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVL 886

Query: 845  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 904
            R ++GKFVVVYFDDIL+YSKS+D+H+ H+R V   LR+  L+ NL+KC+FC ++V+FLG+
Sbjct: 887  RAFIGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGY 946

Query: 905  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 964
            VV+  G+EVD+ KV+AI  WP PK +++VRSF GLA FYRRF+K+FSTIA+PLNEL KK 
Sbjct: 947  VVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKG 1006

Query: 965  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLMQNQRPLMFF 1024
            V F W K QE AFN LK+KL+ APLL LP+F   FE+ECDASG+G+G VL+Q  +P+ +F
Sbjct: 1007 VHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYF 1066

Query: 1025 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1084
            SEKL+G+ L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESLKH+R Q KLNRRHA
Sbjct: 1067 SEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHA 1126

Query: 1085 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1144
            KW+EFIE+FPYVIK+K+GKENI+ADALSRRY LLN L+ ++ G E IKD Y HD  F   
Sbjct: 1127 KWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDV 1186

Query: 1145 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1204
            +  C+ G   + Y++ DGF+FR  KLCIP+ S+R LL++EAHGGGLM H G  KT D+L+
Sbjct: 1187 LLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILA 1246

Query: 1205 EHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1264
             HFFWPKMR DV ++ ARC  C++AK+RL PHGLY PLPVP+ PW DISMDFVLGLPRTR
Sbjct: 1247 GHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTR 1306

Query: 1265 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1324
            KG DS+FVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG+P +IVSDRD KFLSH
Sbjct: 1307 KGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSH 1366

Query: 1325 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1384
            FWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ KN+K WEDCLP IEFAY
Sbjct: 1367 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAY 1426

Query: 1385 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEK 1444
            NR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + E + KLH+  KE IE+
Sbjct: 1427 NRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIER 1486

Query: 1445 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAY 1504
             N++     +KGRK + F+PGD VW+H RKERFP  RKSK+LPR DGPF+VLE+INDNAY
Sbjct: 1487 MNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAY 1546

Query: 1505 KIDLPSKYGVSAAFNVVDLSPLDGSD-GLDSRMNPSQEGENDMN-HDQGISIP-----QG 1554
            ++DLP+ +GVS  FN+ DL P  G +  L+SR    QEGEND + H    SIP      G
Sbjct: 1547 RLDLPADFGVSPTFNIADLKPYLGEEVELESRTTQMQEGENDEDIHTTDASIPIQVPISG 1605

BLAST of CmoCh13G003240 vs. TrEMBL
Match: Q94I07_ORYSJ (Putative retroelement OS=Oryza sativa subsp. japonica GN=LOC_Os10g16560 PE=4 SV=1)

HSP 1 Score: 1602.0 bits (4147), Expect = 0.0e+00
Identity = 794/1464 (54.23%), Postives = 1019/1464 (69.60%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D     IK K+P F GK DP+ YL WE  V+  F CH F +  +V    ++F  +A +WW
Sbjct: 147  DDAFSKIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVWW 206

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
               +   ++N      +W   K  MR RFVP Y+ RD+  +LQ L+QG KSVE+YY+E+ 
Sbjct: 207  ---IEHGKKNPNNMPQTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQ 266

Query: 223  TLMDRLELDEDMEALMARFLNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              + R  L+E  +A MARFL GLN EI D  D + Y+N+  L H+A K ER++Q R    
Sbjct: 267  MGLLRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASA 326

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEK--------S 342
             +      TS+W+  +     +  +               S ++  +  +         S
Sbjct: 327  KANFSAGKTSSWQTRTTPPAGRTASPSSTPTTSRAAPPPSSDKSATKAAQPAPSASSMAS 386

Query: 343  NVRNRDLKCWRCQGVGHYSRDCPNARIMTIK-EGEIVTDDEAHDDINEETDESEEFSEED 402
              R RD++C RC+G GH  RDCP+ R++ +K +GE  +  +  DD           +E  
Sbjct: 387  TGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGEYSSASDFDDDTLALLAADHADNEPP 446

Query: 403  PTHI---------SLVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNV 462
              HI         SL+ +R L+  +++   +QR  LFQT+C+V+   C ++ID GSC N+
Sbjct: 447  EEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNL 506

Query: 463  VSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVG 522
             SS +V++L L T+PHP PY +QWLN+ G+ +VT+   ++F IG Y D V CDVV M   
Sbjct: 507  ASSEMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQAC 566

Query: 523  DLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDH-CKLEKKRQEADAK 582
            ++LLGRPWQFDR  M+ G +N+YSF ++ +K  L  +SP+D+  D   K  K + E+D K
Sbjct: 567  NILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHSMSPEDILRDDVAKAAKSKCESDKK 626

Query: 583  AEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCKG 642
            A+ + +  E  +L  K                   L    S+   ++ S      L+CK 
Sbjct: 627  AQSDGKKPETINLKPK------------------CLLATKSDINELIASPSVAYALVCKD 686

Query: 643  SCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYR 702
            +    + +  SLP     +LQE+  +F +E+P  LPP+RGIEH+ID IPGA +PNR  YR
Sbjct: 687  ALISLHDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYR 746

Query: 703  TNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYR 762
            TNP+E +EIQRQV ELL KGYVRESLSPC+VPVILVPKKDGSWRMCVDCRAIN ITI+YR
Sbjct: 747  TNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYR 806

Query: 763  HPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLT 822
            HPIPRLDDMLDEL G  +F+K+DL+SGYHQIRM +GDEWKTAFKTK+GLYEWLVMPFGLT
Sbjct: 807  HPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLT 866

Query: 823  NAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLK 882
            NAPSTFMRLMN VLR ++GKFVVVYFDDIL+YSKS+ +H  H+R V   LR+  L+ NL+
Sbjct: 867  NAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLE 926

Query: 883  KCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNF 942
            KC+FC ++V+FLG+VV+  G+EVD+ KV+AI+ WPTPK VS+VRSF GLA FYRRF+++F
Sbjct: 927  KCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDF 986

Query: 943  STIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGI 1002
            STIA+PLN L KK V F W   QE AF+ LK+KL+ APLL LP+F   FE+ECDASG+G+
Sbjct: 987  STIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGL 1046

Query: 1003 GAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESL 1062
            G VL+Q  +P+ +FSEKL+G  L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESL
Sbjct: 1047 GGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESL 1106

Query: 1063 KHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEH 1122
            KH+R Q KLNRRHAKW+EFIE+FPYVIK+K+GKENI+ADALSRRY LL  L+ ++ G E 
Sbjct: 1107 KHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLET 1166

Query: 1123 IKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGL 1182
            IKD Y HD  F   +  C+ G   + +++ DGF+FR  KLCIP+ S+R LL++EAHGGGL
Sbjct: 1167 IKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGL 1226

Query: 1183 MAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSPLPVPNGPWI 1242
            M H G  KT+D+L+ HFFWP+MR DV +  ARC  C++AK+RL PHGLY PLPVP  PW 
Sbjct: 1227 MGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWE 1286

Query: 1243 DISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIP 1302
            DISMDFVLGLPRT++G DSIFVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG+P
Sbjct: 1287 DISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVP 1346

Query: 1303 KSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNL 1362
             +IVSDRD KFLSHFWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ KN+
Sbjct: 1347 NTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNI 1406

Query: 1363 KTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEF 1422
            K WE+CLP IEFAYNR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + E 
Sbjct: 1407 KMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1466

Query: 1423 VHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKVLPRGD 1482
            + KLH+  KE IE+ N+K     +KGR+ + F+PGD VW+H RKERFP  RKSK++PR D
Sbjct: 1467 MLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRAD 1526

Query: 1483 GPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSP-LDGSDGLDSRMNPSQEGEN--DMN 1541
            GPF+VL +IN+NAYKIDLP+ +GVS  FNV DL P L   D L+SR    QEGE+  D+N
Sbjct: 1527 GPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDEDIN 1586

BLAST of CmoCh13G003240 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-22
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 1

Query: 843 ITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF--VVSSNGVEVDEEKVKAIKDWPTP 902
           + H+  VL        Y N KKC+F   ++ +LG   ++S  GV  D  K++A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 903 KNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSA 962
           KN +E+R F GL  +YRRF+KN+  I  PL EL+KKN S  W +   LAF  LK  +++ 
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTL 120

Query: 963 PLLALPNFESIF 973
           P+LALP+ +  F
Sbjct: 121 PVLALPDLKLPF 131

BLAST of CmoCh13G003240 vs. TAIR10
Match: AT2G15180.1 (AT2G15180.1 Zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06
Identity = 24/70 (34.29%), Postives = 36/70 (51.43%), Query Frame = 1

Query: 125 YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
           YLQWE  +   F  H+ + E K+ + + Q K  A  WWD+   +R     API +W   K
Sbjct: 119 YLQWESNMNYYFEFHSTAQEDKLSIALGQLKGSALWWWDQDEYNRWYERRAPIRTWERLK 178

Query: 185 ESMRKRFVPQ 195
            +M  ++ PQ
Sbjct: 179 WNMCAKYSPQ 188

BLAST of CmoCh13G003240 vs. NCBI nr
Match: gi|923807396|ref|XP_013689613.1| (PREDICTED: uncharacterized protein LOC106393458 [Brassica napus])

HSP 1 Score: 1705.3 bits (4415), Expect = 0.0e+00
Identity = 837/1476 (56.71%), Postives = 1073/1476 (72.70%), Query Frame = 1

Query: 31   EELTDRIGRLEIQNQARQRIPQPTPSTDTYEGDNSDHHEDNPHAVGPGLMRGRDHGRRYH 90
            +EL    G+       R R   PTP    + G    ++  + H           +     
Sbjct: 623  QELRQATGQGHSNESRRNR---PTPIRQEHAGSQETNNYYSRHRTEHNPTERSSYSSELS 682

Query: 91   NLQQRVPYDDRIDRN--VGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVL 150
              + R  +D R  R   +  +KLK+P F+GK DP+ YL+WEK +E VFNC ++S+ +++ 
Sbjct: 683  RGRSRREHDGRGSRKDKLSGLKLKIPSFHGKVDPDAYLEWEKKIELVFNCQHYSNAQRIK 742

Query: 151  LCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALK 210
            +    F  YA  WWD+L+++RR N E P+DSW E K  MRKRFVP ++ RD+ QKL+ L 
Sbjct: 743  IAATGFYDYALSWWDQLVTTRRLNQENPVDSWHEMKSLMRKRFVPSHYHRDLHQKLRRLT 802

Query: 211  QGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNGLNIEIADKTDLQPYSNIEELLHIA 270
            QG ++VE+YY++M+ LM R  + ED EA MARFL GLN EI D  ++Q Y  IEE+LH A
Sbjct: 803  QGTRTVEEYYQDMELLMLRASILEDREATMARFLGGLNREIQDNVEMQHYVEIEEMLHKA 862

Query: 271  IKIERQIQRR--SQRYSSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRT 330
            I +E+Q++R+  S+ Y S  F +S     K+ K    K      + KPQ K E   SS  
Sbjct: 863  ILVEQQLKRKGNSRSYGSSKFHHS-----KEEKTSYLK------DSKPQQKEETKPSSTY 922

Query: 331  GKE--KVEKSNVRNRDLKCWRCQGVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEET 390
             K+  K E ++ R RD+KC++CQG GHY+ +C N  +M + E GE  +++E       + 
Sbjct: 923  SKDQGKAEITSSRTRDVKCFKCQGRGHYANECTNKNVMILLENGEYESEEEK---FGSDH 982

Query: 391  DESEEFSEEDPTHISL-VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCT 450
            +ESEE SE +P    L VTRR LN   K   L+QRENLF TRC+VQ   CS++ID GSC 
Sbjct: 983  EESEEESEVEPVKGRLLVTRRLLNLQAKNGELEQRENLFYTRCMVQGKVCSLIIDGGSCV 1042

Query: 451  NVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMH 510
            NV S  +VK+L LK Q HPR Y+LQWLN+ GE+RV+ Q LV   IG+Y D+VLCDV+ M 
Sbjct: 1043 NVASETMVKKLGLKIQKHPRSYRLQWLNEEGEMRVSTQVLVPIAIGRYEDEVLCDVLPME 1102

Query: 511  VGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADA 570
               +LLGRPWQ+DRRV +DG+ N++SF  NG+KT L+PLSPK+V  D  +L+KK++    
Sbjct: 1103 ASHILLGRPWQYDRRVSHDGFTNKHSFEFNGKKTVLVPLSPKEVREDQLQLQKKKE---- 1162

Query: 571  KAEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCK 630
                       K +  K + N           K  SLY +  + + +L S  +I++L+ K
Sbjct: 1163 -----------KEIDLKPDHN-----------KHHSLYAKPGDIKRILYSQNSIILLIFK 1222

Query: 631  GSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAY 690
             +        P  PS+ V +LQE+  +F ++ P  LPP+RGIEH+IDF+PG  +PNRPAY
Sbjct: 1223 ETLLTVTDHTPDHPSELVFILQEYADVFPDDSPIGLPPVRGIEHQIDFVPGCTLPNRPAY 1282

Query: 691  RTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKY 750
            RTNP E +E+Q+QV EL+ KG++RESLSPC+VPV+LVPKKDGSWRMCVDCRAIN IT+KY
Sbjct: 1283 RTNPVETKELQKQVEELMEKGHIRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKY 1342

Query: 751  RHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGL 810
            RHPIPRLDDMLDELHG  +F+KIDLKSGYHQIRM  GDEWKTAFKTK+GLYEWLVMPFGL
Sbjct: 1343 RHPIPRLDDMLDELHGSCIFSKIDLKSGYHQIRMKEGDEWKTAFKTKHGLYEWLVMPFGL 1402

Query: 811  TNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNL 870
            TNAPSTFMRLMNH+LR ++G FVVVYFDDILVYSK L+DHI H+R VL  LR E LY NL
Sbjct: 1403 TNAPSTFMRLMNHILRSFIGIFVVVYFDDILVYSKCLEDHIEHLRAVLDVLRKEKLYANL 1462

Query: 871  KKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKN 930
            KKC+FC + + FLGFVVS++GV+VD+EK+KAI++WP+P  V EVRSFHGLA FYRRF+K+
Sbjct: 1463 KKCTFCTDNLVFLGFVVSADGVKVDQEKIKAIQEWPSPTTVGEVRSFHGLAGFYRRFVKD 1522

Query: 931  FSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVG 990
            FST+A+PL E++KK+V F W + QE AF  LKEKL+ +PLL LP+F   FEIE DASG+G
Sbjct: 1523 FSTLAAPLTEIIKKDVGFKWGEVQEAAFQLLKEKLTQSPLLILPDFSKTFEIEWDASGIG 1582

Query: 991  IGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHES 1050
            IGAVLMQ++RP+ +FSEKL+GA+L Y TYDKELYALVRALQTWQHYLWPKEF+IHTDHES
Sbjct: 1583 IGAVLMQDKRPIAYFSEKLSGATLNYATYDKELYALVRALQTWQHYLWPKEFVIHTDHES 1642

Query: 1051 LKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE 1110
            LK+L+ Q+KL++RHA+W+EFIETFPYVIKYKQGKENIVADALSRRYVLL TL+A+LLGFE
Sbjct: 1643 LKYLKGQSKLSKRHARWVEFIETFPYVIKYKQGKENIVADALSRRYVLLTTLDAKLLGFE 1702

Query: 1111 HIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGG 1170
             IK++Y+ D  F    +SC K     +Y   DGFLF   +LC+P+CS+R+L VRE HGG 
Sbjct: 1703 QIKEMYESDPDFQEAYKSCAK-YASGHYFRHDGFLFYDNRLCVPNCSLRDLFVREFHGGS 1762

Query: 1171 LMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSPLPVPNGPW 1230
            LM H G++KT  +L +HF+WP M+ DV ++C RC  CK AK+++QPHGLY+PLP+P  PW
Sbjct: 1763 LMGHFGIAKTLKVLQDHFYWPHMKRDVGRICGRCTTCKLAKSKVQPHGLYTPLPIPTHPW 1822

Query: 1231 IDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGI 1290
             DISMDFV+GLPRTR G DSIFVVVDRFSKMAHFI C+KTDDA H+A+LFF+EVVRLHG+
Sbjct: 1823 NDISMDFVMGLPRTRTGKDSIFVVVDRFSKMAHFIACNKTDDALHVANLFFKEVVRLHGM 1882

Query: 1291 PKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKN 1350
            P++IVSDRD KFLS+FW+ LW KLGTKL++STTCHPQTDGQTEVVNRT+  +LRA I KN
Sbjct: 1883 PRTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRAFIKKN 1942

Query: 1351 LKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVE 1410
            LK+WED LP  EFAYN  +HS +K + FEIVYGFNP++P+DL+P+P  E V+ D   K E
Sbjct: 1943 LKSWEDYLPHCEFAYNHAMHSASKFSTFEIVYGFNPISPLDLIPLPECERVSMDGKKKAE 2002

Query: 1411 FVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKVLPRG 1470
             V ++H+Q K  +E +  + A + NKGR+ +IF+ GD VWVH RKERFP +RKSK++PR 
Sbjct: 2003 MVQQIHEQAKRNLEDKTKQYAKQANKGRREMIFEVGDQVWVHLRKERFPKERKSKLMPRI 2054

Query: 1471 DGPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSP 1499
            +GPF+V +RINDNAYK+DL  KY +S +FNV DL P
Sbjct: 2063 NGPFEVTKRINDNAYKLDLQGKYDISDSFNVTDLIP 2054

BLAST of CmoCh13G003240 vs. NCBI nr
Match: gi|91795223|gb|ABE60891.1| (putative polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 1645.9 bits (4261), Expect = 0.0e+00
Identity = 824/1519 (54.25%), Postives = 1069/1519 (70.38%), Query Frame = 1

Query: 76   GPGLMRGRDHGRRYHNLQQRVPYDDRIDRN--------------VGSIKLKLPKFYGKTD 135
            G G  RGR+HG       + V    R DR                G +K  +PKF G +D
Sbjct: 93   GRGADRGREHGLEESGTDEEVEQPHRDDRRHRGNRGRNQPNEERFGKLKFTMPKFEGGSD 152

Query: 136  PEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWV 195
            PE YL WE  V+ +F  HN+S+ KKV +   +F  YA IWW+++++ R    +  + SW 
Sbjct: 153  PEVYLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQMLNEREEAGQGDVRSWA 212

Query: 196  EFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARF 255
            E K  MR RFVP++++RD+  KLQ LKQG  SV++YYKEM+  M R  + ED E  +ARF
Sbjct: 213  EMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQSIARF 272

Query: 256  LNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQR--RSQRYSSKTFPNSTSTWKKDSK 315
            ++GL+  I    + Q Y N+ EL+H A K ERQ+Q+  +S R  S +  N+ S  K  S+
Sbjct: 273  MSGLHRNIQRIVEFQQYRNLIELVHQASKAERQLQQDMKSNRGVSFSTKNAASGSKFTSR 332

Query: 316  NIDYK-------------HRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLKCWRC 375
                +             +      +   A  E+  ++ T    V  S+ ++  ++C++C
Sbjct: 333  GSGNRGAFSSSSGGARSSNYGTSSGKDLAAPNERKNAANTSSTSVG-SSTKSSGIQCFKC 392

Query: 376  QGVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEETDESEEFSEEDPTHISLVTRRAL 435
             G GH +R+CPN R + + + GE  +  E   + +EE +  E+   E  +  +LV  + L
Sbjct: 393  GGRGHVARECPNNRTIVVNDQGEYESTSEEEQEDSEEENNLEKDICEFESGAALVVTQIL 452

Query: 436  NTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYK 495
            +  + +    QR NLFQTR  VQ     V+ID GSC N+ S  +V++L LK   HP PY 
Sbjct: 453  SVQMSDAENGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLKLLKHPHPYH 512

Query: 496  LQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYAN 555
            +QWLN+ G +++ Q+  V F IG+Y+D + CDV  M V  +LLGRPWQ+DR  ++ G  N
Sbjct: 513  VQWLNNSGSIKIAQRVKVPFKIGEYIDTMECDVAPMTVCHMLLGRPWQYDRSSLHCGRTN 572

Query: 556  RYSFTHNGRKTTLIPLSPKDVFIDHC-KLEKKRQEADAKAEIEKESSEKKSLSEKQESNT 615
            +Y+    G++  L P++P+ +  +H  K  + R E+  + +    S+  KS+SE  + N 
Sbjct: 573  QYTIKWKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKNNLSAPHKSVSESHKPNM 632

Query: 616  QPREKKERKAKSVSLYVRSSEARNVLLS-NQTILVLMCKGSCYFTNMLNPSLPSDFVVLL 675
              R+ K+R+ +++ +    SE R+V  +  Q + +L+CK +    N L  S+PS    +L
Sbjct: 633  --RDNKKREGENLVMIATKSEMRDVRRNPEQVLFILVCKDTLLSANDLT-SVPSVVARVL 692

Query: 676  QEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKG 735
            QE+E +F EE P  LPPLRGIEH+ID IPGA +PNRPAYRTNP+E +EIQRQV  LL KG
Sbjct: 693  QEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKG 752

Query: 736  YVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFT 795
            YVRESLSPC+VPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLDEL G  +F+
Sbjct: 753  YVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFS 812

Query: 796  KIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGK 855
            KIDL+SG+HQIRM IGDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR ++GK
Sbjct: 813  KIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGK 872

Query: 856  FVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNG 915
            FVVVYFDDIL+YSK+L++H+ H++ VL  LR E LY NL+KC+FC ++V FLGFVVS  G
Sbjct: 873  FVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLG 932

Query: 916  VEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWE 975
            ++VDE KVKAIKDWPTP+NVS+V+SF GLA FYRRF++ FSTIA+PLNEL KK V+F W 
Sbjct: 933  IQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWG 992

Query: 976  KDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLMQNQRPLMFFSEKLTG 1035
            + QE AF  LK++LS  PLL LP+F   FE+ECDASG+GIG VLMQN +P+ +FSEKL G
Sbjct: 993  EPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGG 1052

Query: 1036 ASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFI 1095
            A L Y  YDKELYALVRAL+TWQHYLWPKEF+IH+DHE+LK+L+ Q KLNRRHAKW+EFI
Sbjct: 1053 AQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFI 1112

Query: 1096 ETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEK 1155
            ETFPYV+KYK+GKENIVADALSR+ VLLN L  ++ G E IK+LY  D+ F+     C  
Sbjct: 1113 ETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTA 1172

Query: 1156 GLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWP 1215
            G   + Y + DGFLFR  KLC+P CS+R LL++E H GGLM H G  KTYDML++HF+WP
Sbjct: 1173 GKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWP 1232

Query: 1216 KMRHDVHKVCARCIACKQAKTRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSI 1275
            KMR DV ++  RC+ C +AK++L PHGLY+PLPVP+ PW DISMDFVLGLPRT++G DSI
Sbjct: 1233 KMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSI 1292

Query: 1276 FVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLW 1335
            FVVVDRFSKMAHFIPCHK+DDA HIA LFF E+VRLHG+PK+IVSDRD KFLS+FW+ LW
Sbjct: 1293 FVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLW 1352

Query: 1336 GKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHS 1395
             KLGT+L++STTCHPQTDGQTEVVNRT++ +LRA+I KNLK WE+CLP +EFAYNR VHS
Sbjct: 1353 AKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHS 1412

Query: 1396 TTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVA 1455
            TT   PFE+VYGF PL+PIDLLP+P +E  + +A+ +  +V K+H++ KE IEK++   A
Sbjct: 1413 TTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYA 1472

Query: 1456 TRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAYKIDLPS 1515
               NK RK V F+PGD VWVH RK+RFP +RKSK++PRGDGPF+VL +INDNAYKI+LP 
Sbjct: 1473 AWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPE 1532

Query: 1516 KYGVSAAFNVVDLSPLDG-SDGLDSRMNPSQEGEND-----MNHDQGISIP--------Q 1549
             YGVS+ FNV DL+P  G  D   SR  P QEGE+D     ++       P        Q
Sbjct: 1533 DYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQ 1592

BLAST of CmoCh13G003240 vs. NCBI nr
Match: gi|56744299|gb|AAW28578.1| (Putative gag-pol polyprotein, identical [Solanum demissum])

HSP 1 Score: 1632.5 bits (4226), Expect = 0.0e+00
Identity = 821/1520 (54.01%), Postives = 1069/1520 (70.33%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLN EIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLK 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG     GK    KS+  +  ++
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKG-----GKTFNPKSSKPSSSIQ 350

Query: 343  CWRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL--- 402
            C +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +     
Sbjct: 351  CHKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGI 410

Query: 403  --VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 462
              V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +  
Sbjct: 411  IGVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIAC 470

Query: 463  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 522
                 PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR 
Sbjct: 471  MKRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRD 530

Query: 523  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KES 582
              + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E 
Sbjct: 531  TTHHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEI 590

Query: 583  SEKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQ 642
             +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N      
Sbjct: 591  EKKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGL 650

Query: 643  TILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGA 702
             I++L  K        L PSLP+    LLQ FE +F ++ P  LPPLRGIEH+IDF+PG+
Sbjct: 651  PIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGS 710

Query: 703  PIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRA 762
             +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRA
Sbjct: 711  QLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRA 770

Query: 763  INKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYE 822
            INKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAFKTKYGLYE
Sbjct: 771  INKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYE 830

Query: 823  WLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLR 882
            WLVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LR
Sbjct: 831  WLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLR 890

Query: 883  NECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLAS 942
            N+ L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLAS
Sbjct: 891  NQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLAS 950

Query: 943  FYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEI 1002
            FYRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F   FE+
Sbjct: 951  FYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEV 1010

Query: 1003 ECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEF 1062
            ECDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                
Sbjct: 1011 ECDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL---------------- 1070

Query: 1063 IIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTL 1122
                          Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL
Sbjct: 1071 -------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTL 1130

Query: 1123 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELL 1182
             ++LLGF+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL 
Sbjct: 1131 TSKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELF 1190

Query: 1183 VREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSP 1242
            VREAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAK+R  PHGLY+P
Sbjct: 1191 VREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTP 1250

Query: 1243 LPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFR 1302
            LPV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +
Sbjct: 1251 LPVSNSPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVK 1310

Query: 1303 EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAM 1362
            EVV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  M
Sbjct: 1311 EVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNM 1370

Query: 1363 LRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVN 1422
            LRAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N
Sbjct: 1371 LRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFAN 1430

Query: 1423 FDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQR 1482
             D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++R
Sbjct: 1431 LDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKR 1490

Query: 1483 KSKVLPRGDGPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSPLDGSDGLDSRMNPSQE 1542
            K+K+ PRG GP++VLERI DNAYK+DLP ++ VSA FNV DLS  D    LDSR N  QE
Sbjct: 1491 KTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDAD--LDSRTNSLQE 1550

Query: 1543 GEND---------MNHDQGISIPQGPITRTKAKKLQQT---LYSYIQAMVSSSKKILEDV 1579
              ND          + D  +  P+ PITR++ K+       L S IQ  +   +++    
Sbjct: 1551 EGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKG 1587

BLAST of CmoCh13G003240 vs. NCBI nr
Match: gi|56744298|gb|AAW28577.1| (Putative gag-pol polyprotein, identical [Solanum demissum])

HSP 1 Score: 1631.3 bits (4223), Expect = 0.0e+00
Identity = 821/1520 (54.01%), Postives = 1069/1520 (70.33%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLN EIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLK 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG     GK    KS+  +  ++
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKG-----GKTFNPKSSKPSSSIQ 350

Query: 343  CWRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL--- 402
            C +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +     
Sbjct: 351  CHKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGI 410

Query: 403  --VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 462
              V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +  
Sbjct: 411  IGVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIAC 470

Query: 463  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 522
                 PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR 
Sbjct: 471  MKRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRD 530

Query: 523  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KES 582
              + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E 
Sbjct: 531  TTHHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEI 590

Query: 583  SEKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQ 642
             +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N      
Sbjct: 591  EKKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGL 650

Query: 643  TILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGA 702
             I++L  K        L PSLP+    LLQ FE +F ++ P  LPPLRGIEH+IDF+PG+
Sbjct: 651  PIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGS 710

Query: 703  PIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRA 762
             +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRA
Sbjct: 711  QLPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRA 770

Query: 763  INKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYE 822
            INKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAFKTKYGLYE
Sbjct: 771  INKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYE 830

Query: 823  WLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLR 882
            WLVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LR
Sbjct: 831  WLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLR 890

Query: 883  NECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLAS 942
            N+ L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLAS
Sbjct: 891  NQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLAS 950

Query: 943  FYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEI 1002
            FYRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F   FE+
Sbjct: 951  FYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEV 1010

Query: 1003 ECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEF 1062
            ECDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                
Sbjct: 1011 ECDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL---------------- 1070

Query: 1063 IIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTL 1122
                          Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL
Sbjct: 1071 -------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTL 1130

Query: 1123 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELL 1182
             ++LLGF+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL 
Sbjct: 1131 TSKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELF 1190

Query: 1183 VREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSP 1242
            VREAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAK+R  PHGLY+P
Sbjct: 1191 VREAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTP 1250

Query: 1243 LPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFR 1302
            LPV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +
Sbjct: 1251 LPVSNFPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVK 1310

Query: 1303 EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAM 1362
            EVV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  M
Sbjct: 1311 EVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNM 1370

Query: 1363 LRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVN 1422
            LRAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N
Sbjct: 1371 LRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFAN 1430

Query: 1423 FDANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQR 1482
             D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++R
Sbjct: 1431 LDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKR 1490

Query: 1483 KSKVLPRGDGPFQVLERINDNAYKIDLPSKYGVSAAFNVVDLSPLDGSDGLDSRMNPSQE 1542
            K+K+ PRG GP++VLERI DNAYK+DLP ++ VSA FNV DLS  D    LDSR N  QE
Sbjct: 1491 KTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDAD--LDSRTNSLQE 1550

Query: 1543 GEND---------MNHDQGISIPQGPITRTKAKKLQQT---LYSYIQAMVSSSKKILEDV 1579
              ND          + D  +  P+ PITR++ K+       L S IQ  +   +++    
Sbjct: 1551 EGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKG 1587

BLAST of CmoCh13G003240 vs. NCBI nr
Match: gi|22296822|gb|AAM94350.1| (gag-pol polyprotein [Zea mays])

HSP 1 Score: 1620.1 bits (4194), Expect = 0.0e+00
Identity = 812/1523 (53.32%), Postives = 1043/1523 (68.48%), Query Frame = 1

Query: 65   SDHHEDNPHAVGPGLMRGRDHGRRYHNLQQRVPYDDRIDRNVGSIKLKLPKFYGKTDPEE 124
            +D  +D+  A  P   R R + R      +R  + +  D     +K K+P F GK DP+ 
Sbjct: 107  ADTEQDDQEA--PNRRRLRTNRRGMGGFHRREVHGN--DDAFSKVKFKIPPFDGKYDPDA 166

Query: 125  YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
            Y+ WE  V+  F CH F +  +V    ++F ++A +WW   +   ++N      +W   K
Sbjct: 167  YITWEIAVDQKFACHEFPENARVRAATSEFTEFASVWW---IEHGKKNPNNMPQTWDALK 226

Query: 185  ESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNG 244
              MR RFVP Y+ RDM  KLQ L+QG KSVE+YY+E+   M R  ++E  E+ MARFL G
Sbjct: 227  RVMRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGG 286

Query: 245  LNIEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPNSTSTWKK-------- 304
            LN EI D    + Y+N+  L H+A K ER++Q R     S      ++ W++        
Sbjct: 287  LNREIQDILAYKDYANVTRLFHLACKAEREVQGRRASARSNVSAGKSTPWQQRTTTSMTG 346

Query: 305  ----DSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNV----RNRDLKCWRCQG 364
                 + +          ++KP+A      +    K     S+V    R RD+ C+RC+G
Sbjct: 347  RTLAPTPSPSRPAPPPSSSDKPRASSTNSATKSAQKPAGSASSVASTGRTRDVLCYRCKG 406

Query: 365  VGHYSRDCPNARIMTIKEGEIVTD----DEAH------DDINEETDESEEFSEEDPTHI- 424
             GH  RDCPN R++ +K+    +     DEA       DD   +    E+   +D  H  
Sbjct: 407  YGHVQRDCPNQRVLVVKDDGGYSSASDLDEATLALLAADDAGTKEPPEEQIGADDAEHYE 466

Query: 425  SLVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 484
            SL+ +R L+  +++   +QR  LFQT+C+++   C ++ID GSC N+ SS +V++L L T
Sbjct: 467  SLIVQRVLSAQMEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTT 526

Query: 485  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 544
            +PHP PY +QWLN+ G+V+VT+   ++F IG Y D V CDVV M   ++LLGRPWQFD  
Sbjct: 527  KPHPHPYHIQWLNNSGKVKVTKLVRINFAIGSYRDVVDCDVVPMDACNILLGRPWQFDSD 586

Query: 545  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLS 604
             M+ G +N+YS  H+ +K  L+P+SP+ +  D            AKA   K  + K    
Sbjct: 587  CMHHGRSNQYSLIHHDKKIILLPMSPEAIVRDDV----------AKATKAKTENNK---- 646

Query: 605  EKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCKGSCYFTNMLNPSLPS 664
                       K   K K   L    ++   +  S      L+CK +      +  SLP 
Sbjct: 647  ---NIKVVGNNKDGIKLKGHCLLATKTDVNELFASTTVAYALVCKDALISIQDMQHSLPP 706

Query: 665  DFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVS 724
                +LQE+  +F  E+P  LPP+RGIEH+ID IPGA +PNR  YRTNP+E +EIQRQV 
Sbjct: 707  VITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQ 766

Query: 725  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 784
            ELL KGYVRESLSPC+VPVILVPKKDG+WRMCVDCRAIN ITI+YRHPIPRLDDMLDEL 
Sbjct: 767  ELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELS 826

Query: 785  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 844
            G  +F+K+DL+SGYHQIRM +GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMN VL
Sbjct: 827  GAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVL 886

Query: 845  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 904
            R ++GKFVVVYFDDIL+YSKS+D+H+ H+R V   LR+  L+ NL+KC+FC ++V+FLG+
Sbjct: 887  RAFIGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGY 946

Query: 905  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 964
            VV+  G+EVD+ KV+AI  WP PK +++VRSF GLA FYRRF+K+FSTIA+PLNEL KK 
Sbjct: 947  VVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKG 1006

Query: 965  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESIFEIECDASGVGIGAVLMQNQRPLMFF 1024
            V F W K QE AFN LK+KL+ APLL LP+F   FE+ECDASG+G+G VL+Q  +P+ +F
Sbjct: 1007 VHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYF 1066

Query: 1025 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1084
            SEKL+G+ L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESLKH+R Q KLNRRHA
Sbjct: 1067 SEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHA 1126

Query: 1085 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1144
            KW+EFIE+FPYVIK+K+GKENI+ADALSRRY LLN L+ ++ G E IKD Y HD  F   
Sbjct: 1127 KWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDV 1186

Query: 1145 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1204
            +  C+ G   + Y++ DGF+FR  KLCIP+ S+R LL++EAHGGGLM H G  KT D+L+
Sbjct: 1187 LLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILA 1246

Query: 1205 EHFFWPKMRHDVHKVCARCIACKQAKTRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1264
             HFFWPKMR DV ++ ARC  C++AK+RL PHGLY PLPVP+ PW DISMDFVLGLPRTR
Sbjct: 1247 GHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTR 1306

Query: 1265 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1324
            KG DS+FVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG+P +IVSDRD KFLSH
Sbjct: 1307 KGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSH 1366

Query: 1325 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1384
            FWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ KN+K WEDCLP IEFAY
Sbjct: 1367 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAY 1426

Query: 1385 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEK 1444
            NR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + E + KLH+  KE IE+
Sbjct: 1427 NRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIER 1486

Query: 1445 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKVLPRGDGPFQVLERINDNAY 1504
             N++     +KGRK + F+PGD VW+H RKERFP  RKSK+LPR DGPF+VLE+INDNAY
Sbjct: 1487 MNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAY 1546

Query: 1505 KIDLPSKYGVSAAFNVVDLSPLDGSD-GLDSRMNPSQEGENDMN-HDQGISIP-----QG 1554
            ++DLP+ +GVS  FN+ DL P  G +  L+SR    QEGEND + H    SIP      G
Sbjct: 1547 RLDLPADFGVSPTFNIADLKPYLGEEVELESRTTQMQEGENDEDIHTTDASIPIQVPISG 1605