CmoCh13G003110 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G003110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPhotosystem II CP43 reaction center protein
LocationCmo_Chr13 : 3346646 .. 3365375 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGGTCGTAACCAAGAAAGAACCCCTTGGTTTCGGTGGGAATGCCCGACTTATCCATTTAGACGGTAAACTACTGGAGGCGGGCTCATGTAGCCCATGCCAGATTAATCGTATTCTGTTATGGGCCGAAGCAATGAACCTATTCGAAGTGGCTCATTTTATACCTAAGAAGCCCATCTATGAACAAAGATCCATTTTCCTTCCCCGCACGCCTAGCTACTACTCTAGGTTGGGGCGTAGGCACTGGTGGGTAAGTAAGTTATAGACACCTTTTCATACTTTGTGTCTGGAGTAATGATATGAACCACGACCAAGGAATTTCCATACCTCAAGGTCCAATTACAAGGACGAGAGCCAAGAAGCTACAACAAACTTTATACAGTTATATTCAAGCTATGGTGAGCTCATCAAAGGAAATTCTAGAAGACGCTGGAGCTTATATGTTGTGCAAAGTTGAGGTTCAAGAAAGAGATGAATTAAATGCACTTTAAGTTGCATTTAATGAACTCCGCTGAATTTATCAAATAGTCCAAGGATGACTAATAAGCACATTTTATTATTTGCATTATTTAATTATAGTTTAACTATTTGTTTGTCATATTTAAACTAGTTTTAAATATAGGAGTTAAGGTTATATTGTAACCCACATAGGTTACTATATTCCACCATTAACTAGCCATTTAAATATGGAGGTTATGGGTATTTCTCATTTACTAGCCCATTTAATTTGGGAGTTATGTATGACATAGGTTAAGGTTGTAAAGGCTATATAAAGCCTTCTTTTCTTTGATTAGACATAAGATTTTGGAATTAAGAATAGAATTTCTATTTTAGCTTTGTTAAGAGCTAAACTTTCTTTGCAAATTATTGTGTTTAGAACTTGCATGTTGAGTCATTCAAGGGGTATTGATCAAACCTCTTGTGGAGTGATTCGAATCATGAGTTTAGAAACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCGTTCCATACTTTCCCTTGGGTTGATTTCCATATCATTTTGGTATCAGAGCTTTAGGCTCACGATCGGATATATGTTTCATTGCGCTTATCTCTTTTAATTTTCTTATAATTTTTTTTTCTCAGTTTGTGTAGAATGTTCATGTTCTATCACAAAAATATATAACAAAAAAAAAAAAAAAAATTCTTATGTTCTTTAAAGTGTTAGATCTGGATCTTATCAACACTTTGTTCTTCTTTAAGATCTTCTAAATCAATTTTCTTGTTGGTAAATTGTTTAGATTTTGCCAATCAGAAGGAAAAAAAAAAAAAACCATTGAAATAAAGAAAGCATATGATGTTAAATGTCTTTCTTTTTTCCTCATGATTACTATATGTAACTCTCATATGTTACTACGTCTAAATTAGTCCTTAATCATTTTCTTTTTTTAATTCGTTTCTTTGTCGTTATTCGGATTGCTCCTTCAATACCCTTGTTTATGTGTTGAGTGTGCTGTCTATTCACTTTGAATTGCACTTAGCTCTATAACATAGCTTGTCTCACATCCCAATTTGTTTTTTTGGAGTGTGATTTGTGTGTGCTCAATTGTGAGGGTGAGTTTGTAAGGGAGTGACACATTGCTTCGAGTGTTGAGTGCTAAACACAAGTGAACTACATTTACGAGTTAATACACGTGAGGGAGCGCTTGTGAGGTCCTTTTTTTTTTCTTTTACCTTTCTTTTGTAGCATGGAAAATCCAGACGACAATACTAACATTACTGATGCACGATTGAGAGAAGCACAACAACGAACCATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCACGACAGAGGATTCCACAACCTACGCCCTCAACCGATACATATGAAGGCGACAATTCTGATCACCACGAGGATAATCCACATGCGGTTGGTCCTGGCTTGATGCGAGGGAGAGACCATGGAAGAAGGTATCATAATTTACAACAACGAGTTCCTTATGATGATAGAATTGATCGTAACGTGGGGAGCATCAAATTAAAACTTCCCAAGTTTTATGGCAAAACCGATCCAGAGGAGTACCTTCAATGGGAGAAAACGGTGGAGTCGGTGTTCAACTGTCATAATTTTAGTGATGAAAAGAAGGTACTGTTATGCATTGCTCAATTCAAACAATATGCTCAAATTTTGATACGATAAGGAATCAACTACAAGGGGAATAAGATTCGGATTACCTTGTAGATCGAATATCTCAAGCCAAGAACACTTTGTTTGAGATTCGAATCACTCCAGAAGCAAGATCGATCATGTCTAGCTTCAATGATTCTTGTTGATCAAATATCTCAAACACTTGTTTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACATGCAATCTAAACTACATAGAATTGTAAACAAACTCAGCCATTGGCTAAGAAAAGCACAAATGCTTCTTTTACTATATTTTCCAAGTCTGCTTACAAATACAACATACATGGCTTTCTATAGCCTCAAAATGAAACTATTAAAGACATTCCAAAAGTTGTAACATTCACACTTTATGGCCATAATTAGCCATTATGTAAATGTAACCGAAATTAAACAAAAAGTCTTAAAATACAATAACTCTAAATTACTCTAAATTATAACCCACCCAAAATTTACAACAATCAAACTTTATTCTTCTTCAATGTAGCATGAATTGAAACATCTTTTGATAATTTTGACAACCTTTTCTTCACATCTTCATTGAAGCATATTGTATGATTGATGTCTCTTGGTTCATATCAAATTTGGTGGGATAAATTGATGTCAAGTAGGAGAAGAAATCTTGAAGCACCAATTGATTCATGGGTCGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCGTTGAAACAAGGACGCAAATCTGTGGAGGATTATTACAAGGAGATGGATACATTGATGGATCGACTTGAACTTGATGAGGACATGGAGGCTCTCATGGCGCGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTATAATATTGAGGAGTTGTTGCACATTGCAATTAAGATCGAGAGGCAAATCCAACGAAGGTGTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAGAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGGGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACACTATAGTAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGAGAAATTGTTACGGATGACGAGGCACATGACGACATAAATGAGGAAACTGATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTACACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACGGCCTAGACCAAAGGGAGAACTTGTTTCAAACTCGGTGTCTTGTTCAATCTGTACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTGTGAGTTCCATTCTGGTCAAAAAACTTAATTTAAAGACACAACCACATCCAAGACCCTACAAGCTTCAATGGTTGAATGATTGTGGGGAAGTACGGGTAACTCAACAAACTCTTGTTTCTTTTACTATTGGAAAATATGTTGATGGTGTTTTATGTGATGTTGTATCCATGCATGTTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATGTATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAATGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAACATTTATTTTCCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGTACGTGAAAGTTTGAGTCCTTGTTCTGTTCCAGTTATTCTTGTACCTAAGAAAGATGGTTCTTGGCGTATGTGTGTTGATTGTAGGGCTATAAACAAGATAACTATAAAGTATAGGCATCCAATTCCCAGATTAGATGATATGCTTGATGAATTGCATGGATGTAGTCTTTTTACTAAGATTGATTTAAAATCGGGTTATCATCAAATTCGCATGCATATTGGGGATGAGTGGAAAACAGCTTTTAAAACCAAGTATGGTCTTTATGAATGGTTGGTTATGCCTTTTGGATTAACTAATGCACCTAGTACATTCATGAGACTAATGAATCATGTCTTACGAGAATACTTAGGTAAGTTTGTGGTTGTTTATTTTGATGACATCCTTGTTTACTCTAAATCTTTAGATGATCATATTACCCATGTACGCAATGTTTTGACTACTTTAAGAAACGAATGTTTGTACGTAAATTTAAAGAAATGTAGCTTTTGCATGGAAAAAGTTAACTTTCTTGGGTTTGTAGTTTCATCTAATGGTGTTGAGGTTGATGAGGACAAAGTGAAGGCTATAAAAGATTGGCCTACACCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTTAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATATCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTATTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTGAACATTTTTTTTGGCCTAAAATGAGACGTGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTGTTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTAGGAACTAAGCTAGTATATTCAACTACTTGTCATCCTCAAACGGATGGACAAACTGAAGTTGTTAACAGAACCATGACTGCTATGCTTAGGGCTATTATTGATAAGAATCTTAAGACTTGGGAGGATTGTTTGCCATTTATAGAATTTGCATATAATAGGGTTGTTCCTAGCACTACTAAATGCACACTTTTTGAAATTGTTTATGGCTTTAATCCTTTAACCCCTATTGACTTGTTACCCATACCGTCAAAAGAGTTTGTGAATTTTGATGCAAATGCCAAGGTTGAGTTTGTTCATAAACTGCACAAGCAAGTGAAAGAACAAATTGAGAAACAAAATTTCAAGGTTGCCACCCGAATTAATAAAGGACGTAAGATTGTCATCTTCAAGCCAGGAGATTGGGTTTGGGTGCATTTCCGAAAAGAAAGATTTCCTACTCAAAGAAAATCTAAGCTTTTACCACGAGGAGATGGACCTTTTCAAGTTCTTGAGTGCATCAACGACAATGCTTATAAAATTGATTTACCAGGTAAGTACGGTGTTAGTGCAACTTTTAATGTTGTTGATTTGAGCCCTTTTGATGTAGGTGATGGCTTGGATTCGAGGACGAATCCTTCTCAAGAGGGGGAGAATGATATGAACCACGACCAAGGAATTTCCATACCTCAAGGTCCAATTACAAGGACGAGAGCCAAGAAGCTACAACAAACTTTATACAGTTATATTCAAGCTATGGTGAGCTCATCAAAGGAAATTCTAGAAGACGCTGGAGACCTCCCTTATATGTTGTGCAAAGTTGAGGTTCAAGAAAGAGATGAATCAAATGCACTTTAAGTTGCATTTAATGAACTCCGCTGAATTTATCAAATAGTCCAAGGATGACTAATAAGCACATTTTATTATTTGCATTATTTAATTATAGTTTAACTATTTGTTTGTCATATTTAAACTAGTTTTAAATATAGGAGTTAAGGTTATATTGTAACCCACATAGGTTACTATATTCCACCATTAACTAGCCATTTAAATATGGAGGTTATGGGTATTTCTCATTTACTAGCCCATTTAATTTGGGAGTTATGTATGACATAGGTTAAGGTTGTAAAGGCTATATAAAGCCTTCTTTTCTTTGATTAGACATAAGATTTTGGAATTAAGAATAGAATTTCTATTTTAGCTTTGTTAAGAGCTAAACTTTCTTTGCAAATTCTTGTGTTTAGAACTTGCATGTAGAGTCATTCAAGTGGTATTGATCAAACCTCTTGTGGAGTGATTCGAATCACGAGTTTAGAAACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGTAATTCGTTCCATACTTTCCCTTGGGTTGATTTCCATATCAACTTCACTGAATTTCCTCTGCAGTATTGGGTTTTGACGGTATTTATCATGCACTTCTGGGACCCGATACCCTTGATCTTTTCCATTCTTCCGTTATGTGTTAAGATAGAAAGCAAATGACTACTTGGGTATTCACTAAATTAGGTAGAGGTTTCTTCTAGTATTCAAATCTCCTGATTTGGGGGGTGTACATGATACCTAGGCTCTGTGGGGAGGAGATTTAAGATCAATTACCAACTTGAACCTTAGCCCAAGTGTGATATTTGGGTATTTACTCAAATCTCTGGGGGAGAGAGAAGGATGGATTCTTAGTGTAGACGATTTGGAAGATATAGTTGGGGGGCACGTATGGTTAGTTAGGTTACATTTGTATACTTGGGGGAATTTAGTAGATCTTAACTAAACCGTTTGGCTCGCCACACACTTGTATGGTCTGGAGAAGCTTACTTGTCTGATAGTTTAGGTGCTTTATCCCGTTTTGGTTTTATTGCTTGTTCTTTTGTCTGGCTTGTTCTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTGAGTTTTAGGGGCCGACTGGACCCGAAGCTTCTCAAGCTCAACCAACCGTTTATGTTTGTAGTTAGAGACCTCTTGTAGCTAACATTGGATCAAGGACCTACTCTACTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCATAGAGAAAAGGCATTTTGAGGGGAGAGATAGAAAGAAAGAGACTATGTGCTTTTGGGATCTACGTGCTCCTTGGTTAGAACCAATAAGGGGTCCTAATCGTTTGGACTTGAGTAGGCAAAGATATAAAACCTTGGCAAGACCTCATGCAGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTACGGGGGTGGTGTGTAGCTACCGAAATTATAAGGAGGGAGGGAGTGAGCCCCCTTCTAATATGGCTAGCGGACGGCGGAAGAAAGAAAAAAAGAGATAGTTCTGAGGAAAGGAAAAAGTCAGACTTTTCAAATATAACCTGATCTGTCCAACCTGATATATATATGGTGGAATCCAATGGATTTTGCCTTCATTAGATTGCCTGTCTCAGTTAAGAGGAGTCATGAAGAGGTCGATCAATTCCTTTTTCAAATCCTGCGGCAGCTGCCCCAGCCCTTCCTGCATGCCATAAATGACCTACAAATGGGGGGAATCCTAGAACAAAATGAGAGGTAACTAACCAACTTCTAGGAGAGAGATAATTGACTACAATGACCAATGAAATACTGGAATTTCTTAGCAAGTATCTTGCTTTATTCTGATTACTCCGGGATTGCAACAAAGAGCTAGAATCAAATCCCCATCCGTATGGTCAGCTACAATTTACACAGAACAGATTAAGCAGTCGGAGATAATTAGATTTGAGTGCCAAAACACTTCTTTAAGCCTAAGATAAAGTCCTGACTTCGATTGAGCTGAGGTCACAAGGTAGGTCAGACCCTTCTCAGCTCTTATTAAAGCATTGAGCCAACCAACCGTCAATCATAATCAAGAAAGTCTCTCCCCCTAGAGGTAAACCTATTCCATTGGTCTCCCAATTACATTGCCTCCCCCTCGGACACTTATTAGTTTATAAGCCGGAATGAACCCTCAGCCTAAAGAAAGAGTTGACTAGACTAGGTAATCTCAGCAAATAAAGGATAGGAAAAGTAGTTCAGGATCATTCAGAAATCAGGAGTATTGCTCTTTTACAGTGAAAGAATAAATAGTTAAAGGAGCGAAGACGAAGACAAAGTGTTTGAATAGTGAAACCCGAGTGAAAGCAAGAAGGGACAAGTGATTGAGTGAACGATCATGAATTGTGAAAGAAAGGACAGAATAATTCTTCTTTCTTCTTCTTTGACAGTGAATGAATCCGGGAAGAGAGAGTCAATTCATTAGCGGCCCTTGTTTATTGTTCGTGAAAGAATAAAGAACCATAACAGAAGGGAATGAGGTAATCCCACCCAGCCTTGTTCAAGAGTGAAATCAGGGACAAGTGATTGAGTGAAGGAAAATTCATCTTGTTTGTTGAGTTGAGTCTTAGTTTGTTTACCGTTCAAGAATCCATAGGAAAAGGAGTGAGTGGAAGATGCTTTTACCTATTTGTTCAAGAGTGAAGGTTTCGTCCGTTGTCTTTCTTAGTTTACAATCTTTGAAGGGAAAGAAAGGATAGGTTGAGTCTCATTGAGTTGAGTCCGCGTTTCCAGTTCCAGAATAAATAGGTTCAGTAGCTCAGCCGAGGAAAAGGTTTCTTCCTCTTTTCTTACATTCTCGTCAGGTGAAGGTGAAGTAGCTCATTCATTTACTACTCTCCTGTAAAGTGAAGGCAAGGTCATATCGGTTTCGGAGCAGTTAAGTTAGATTCTCCCTTTAGTCTTTCACGGTAAAGAAAGGTTCTGAAAATAGCTTGACTTACCTCCAGAAATAAGGGAAGGGAAGGGAATACAGGGGCAGGGGAAGGAGTTCCATCCGGGAGAGCACTCAGGTAATATCGGTGAAGGAGAAAGATTAGTTCAAGAGTTCAATCTATCTGGTTCAGTAGTTTACCGGGTGAAATCAGGTTCAGGTTTGAGGTCTCTTTCCTTTAGAATTATACCTCAGCCGATTTTAGCCCTAAAAATCAGGGAAGGACAACATTTATTTCTTTCTAGTCTTTACACGAGTGAAAGAGGGGACAAGTGATTGAGTGAAGTTCTACAACTCTTTTGTCTTAGTTTACAGTTCCATCTGGGAAGGGAATACTGTCATTCCGGACAGGTAATAGATTAAAAGGTTACGGAGTTCAGTTCGTTCAGTAGTTAAGTTCGTAAACAATCATTAATTTGGATTCTTTTCTTACAGTTCAATCCAGTGAAGGAGAGAGAATGAATCCTGAGTATTGATCTTTTTCATACGATGCGCCTCCGGGGAATACAATCTGTTGTCGTAAGTGGAGTGGGTTGTTGCAACCGCTGTTCTCTTCCTTAGAAAAGCTGATAGTTGTAGAGGTTCAGGGGCGAACACATGAAACCGAGTTTACGAGGTGAAGGGGCAGGATCATTCATCTTTCATTTTCTTCTTCAATCAATGAATTAGCTTACTCGACTCCCTCCCTTCTATTTACCTCATGTTTGAATAAATAGGTGAATGAGTTTACCGAGTTCAATCAGGTTCAGGAGAAAGAAAGAAACAAACACACACCTCTTCCTGTATAAGAAAGCAGTAAGGATACTAGAAGATGCTAACACCTATTTACTTACCTCGGTTACTGTGAAAGAAGGGAATAAAACAAAACTAGCAAAGGCTAAGATAGAGAGAGAGGAGCGAAGACGAGTTGGAGAGGTTCCGGGGTTCAGTTTCATTCATCTCTATCTTTTCTAAAGGTTCCGGAGTTCACTTTCATTAATCTTTCTCTTTCGTCTTTCCTTACTGTAAAGTCTCATTCAAATAGCTTTACCGAGTTGAAGAGTGAAATCTGGAGAATTAATCTTCTCTTGCTTCAATCTTTCAATTCTCTTATCTTTTCTTTACTCAACTGTAAACAAGGGGGTTTAATTCCCTACTTCTCTTTCTTTCCTGTTACGTCTCATTCATTGGAAAGTCTTAGTTTACAGTTCCATCAGATCAGGTCATAAAGGATCAGCAATGGAATTGTTCAACCAAACGAGTTTACGAAAGGGGCAGGGTCAGGTTCTGGAGTTCCGTTTCATCTCTTTTCTTTCCTGTAAAGGGATCAAGAAGAAATAGGAGTAAGTAGCTCGACTGTCAAGTTCAGGGAAGGGCATATCGCGGAAGGAGCTTTTAAGTTTGGTTCTCCCTATTCTTTCACTATAAAGAATCTTTCATCTTTCTTTCTATTCTATTTACCGAGTGTTTGAATAAATGGGTTCAGGAGCGAAGCGAAGAAATGAGACCTATAAAGAATGAGCTTGACCTTTCATCCAGCCCCTTTACTTACCTTACTTTGTATTTGAGTGAAAGAAGGTGAATGAGTTTACTGTTCAAGAATGAATCAATAGGTATAGGTTCAGGGCGAGTCCATGAATTAGATTAGCTGCCTTACCTCGTTCAATTAGGGAAATAGGATGTTCAGGTCGTAAACTAGAATGAATCTTGAGTCTTCCTCAGCCCTTCCGGTTCAGTCTCATTCATAAGCTTTCGTCTTTGTTTACTCTTCGTTCAATCAGGGACAGGATCAAGAACCAAACAAACAAACACCATCTCTTGTATAAGTTCAAGGATAAAAGATAGCAGCCGGAAGATGAAAGAAAAAATAGGGAGAAGTGAATGAGTAAGTACATGAAGACACTGCTTTACCTTTTGAATAAATAGGTAATGGCTCAGGTTCTTCTTCTAGCTTGACCTTGTTTACAGTTCCAGAATAAATAGGTGAATGAATGGGCGAAGCAATGAGACAGACCTATAGGTTCAGTCGCTGATCTTTCTTTCCTTTCTCTTTTGCTTTTACCGACTGACTGTAAATGAACAAGAGCTGACGGGAATAGAGGTTCAGGAGTGAGATTAATAGAATTAGATATAGATACCGTTGAGTCGTTAGAATAGGTGGTTGGTTGAGTCTCATTCATAAGGAGTGGTTACTGTTCCTTCAATCAAAGAGCTACTTCATTCATCTTTCTTTCGTCCTCCTTTACTAGAGGAGAGTGAAAGAGTGAAATCTGGTTCAGGCGAAGCAAGCTGTGAGACCCATAGGTAATCTCAGCCTATTTAGTTACCGAGTTCAAGATAAGAGAAGATTAAGAAGAAATAGGAAGAGGTTTAAGGTTGAGTTTTTTATATGAACCAAGAGACATCATTCATACAATATACTTCAATGAAGATGTGAAGAAAATGTTGTCAAAATTATCAAAAGAGATGTCACATTGAAGAGGAATGAAGTTTGATGGTTATAAATTTTGGGTGGGTTACAATCTAGAGTAATTTAGAGTTATTGTATTTTAAGACTTTTTATTTCATTTAGGTTACAATTACCTATTGGCTAATTATGACCATTTAAGTATGAATGTTACACCTCTTGGAATGCCTTCAATAGTTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAATTAGACTTGGAAAATATAGTAAAAGAAGCATTTGTGCTCTTCTTTAGCCAATGGCTAAGTTTCTTTGCAATTCTATGTAGTTTAGATTGCATGTAGAATCATTCAAACTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTGCATTGAGATATTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGAGTGATTCGAATCTCAAACAATGTTCTTGTCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCCCCTTGTATTGATTCCTTATCTTATCAGTTTCATTCATCTTTCTTACAGGAAAAGAAAAAGAGAAAGAATCAATCAAGAGGTTCCGGAGTAAACATTCATCTTTCTTCTACAGTTCAATCTGGTCAGGGAGTATAAGGAGCTCAGACGAAGACAGAGTGTTAGAATAAATAGGTGAAATCAGGTAATAAAATAGAGAGAATAGGAACAGGAGTAAGTAGCGAGAAGAGACCGAGGTCAATGTTCCAATCCGGTGAATGAGAAAGATCAGTGTTTCAATCAATAGGTGAATTAATCTTTCTTTTGTCGGAGAGTCTTTTAGTGAAATCTGGTTCCGGAGCTTGCCCTTTCATCTAGCTTACCTAGTTTACCTTACCTTGTGATTGAGTTCTCTCTCATTCATAGAGAGTCTCGTCTTTCCTTTCAACACTTCCCTGAAAACACTGTAAAGGAGAATGAATCAAACATGACTTAAAGAACAGAACACATTGTCTTGCTTCAGTCTTTCCTTCCTGGTTTAGTATATATATATCTGCAGTTGAAATCATCTCTTTTCCCGACTCTAAAGGATAATCAAAGAAAGGAGCGAATCTATGAGACATAAAATAGAGGTGAAGGAGCGAAGGGAATGAAGTAGCTTAGAGAATAGAGGTTCACGAGAGAATAGGAACAGGAGTGAAGTTCTGTCTCATTAATCTTTCGAACATCCTTTCATTTGCTTACTTACAGGAGAGGAAAAGAAGAATATAGTCGTCCAGTTTACCCTCTTCAATCAGGTAAGTAGTTCAGGATCATTAATGTTTCAAATTCATCTTGTCTTGCTTCAGTCTTGACTTTCGGTTCAGGAGCAAAGCCGTGAGACCGAGTTTACGAGGTTCAGGGAAAGTAGTTCGGGAGCGCAGCAACGAGACTCAAAGAGGATTGAAGCGAACATCCTTTTCTTTTACCTTGTGTTTGAAGGGACAAGTGATTGAGTGAAGGAGAAAGAGCAGTTCAAGAATCAATAGGTGAAGGTGAAGTAGTGATTTCATTTACCTCATTCAAGAATACATAGGGAGAGGAGTGAAATAGCTCGACCGGTAGGGAGAGGATTGAATTCATTTAGTTTTACCGAGTTCAAGAGTGTCTGATTCTTCTTGCATTCCGTTCAGGTTCAGGAGATAATGAATGAATTTAGCTTTACCGAGGGAAAGAGTGAAAGAGGGTTCCGGTTGAACTATCTCGTTGCTTTTCTTTACTCTCTAGTTCCAGATTGAATGAAAGAAGGTAATAGCATATAAGGTTTAGTAGTTAAGTCTCATAACGAATTCACAATAACTTCTAGTAATGTAATATCGGTTCATGAGTTTACAATTCAGGGAGGGGGGAGTCAATTCATTTCATATGCTTTCCCGAGTTCAATCTAGTTGATATGCTTTACCTGGTTCGTTCAGTAGTTCAGTTCAGGGAATCGAGGTGACGGGTTTCTCTTTCGGCTTAGTTTACATTACAGTTAAAGTCAAGAATAACATAGGGACAATCAGGGACAAGATTGAATATGCGAGCAAAGTCTCATTCATCTTTTCGTCTTGACTTGCTTGAAGGTGAATGATATGAACCAAGAGATATCATTAATACAATATACTTCAATGAAGATGTGAAGAAAATGTTGTCAAAATTATCAAAAGAGGTTGCAATTCATGTCACATTGAAGAGGAATGAAGTTTGATGGTTATAAATTTTGGGTGGGTGATATGAACCAAGAGACATCAATCATACAATATGCTTCAATGAAGATGTGAAGAAAAAGTTGTCAAAATTATCAAAAGATGTTTCAATTCATGCTACATTGAAGAAGTATAAAGTTTGATTGTTGTAAATTTTGGGTGGGTTATAATTTAGAGTAATTTAGAGTTATTGTATTTTAAGACTTTTTATTTAATTTCGGTTACATTTACATAATGGCTAATTATGGCCATAAAGTGTGAATGTTACAACTTTTGAAATGCCTTTAATAGTTTCATTTTGAGGCTATACAAAGCCATGTATGTTGTATTTGTAAGGGAGACTTGGAAAATATATTAAAAGAAGCATTTGTGCTTTTCTTAGCCAATGGCTAAGTTTCTTTGCAACTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTGCGTTGAGATATTTGATCAATAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGAGTGATTCGAATCTCAAACAATGTTCTTGTCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCCCCTTGTAGTTGATTCCTTATCGTATCATTTGGTATCAGAGCTTCAGGCTCAAGATCGGATATATGTTTCCTTTGCGTTTCTTCTCAATTTAATTTTTATTTATTTTCATCTTTTTAGTTTTTAATCGACCCAAAGTTCAAAATTCAATCTTTGCTCTATTTAAAATTTTGAGAGGTGAGAATAAGAGCTTCATTTGTGTAACTGAGTGTAAAAAGAGTGTCCTAAAATTTTCTTGAGTGTATACTCGTGAGAGAGTGTTGTGAGGTCCTTCGTATTTCCATAACTTATTTTTTTGCAGCAAAGTTTCACAAATAGATTTGAGGACGAATCCTCTTGAAGAAGTGGAGAATGATATGAACCAAGAGACATCAATCATACAATATGCTTCAATGAAGATGTGAAGAAAAAGTTGTCAAAATTATCAAAAGATGTTTCAATTCATGCTACATTGAAGAAGAATAAAGTTTGATTGTTGTAAATTTTGGGTGGGTTATAATTTAGAGTTATTGTATTTTAAGACTTTTTATTTAATTTCGGTTACATTTACATAATGGCTAATTATGGCCATAAAGTGTGAATGTTACAACTTTTGGAATGCCTTTAATAGTTTCATTTTGAGGCTATATAAAGCCATCTATGTTGTATTTGTAATAAGACTTAGAAGATATATCAAAAGAAGCATTTGTGCTTTTCTTTAGCCAATGGCTAAGTTTCTTTGCAACTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAGTGTTTGAGATATTTGATCAACAAGAATCATTGAAGCTAGACATGATCGATCTTGCTTCTGGAGTGATTCGAATCTCAAACAAAGTGTTCTTGGCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCCCCTTGTATTGATTCCTTATCTTATCATTTGGTATCAGAGCTTCAGGCTCAAGATCGGATATATGTTTCCTTTGCGTTTCTTCTCAATTTAATTTTTATTTATTTTCATCTTTTTAGATTTTAATCGACCCAGAGTTCAAAATTCAATCTTTGCTCTATTTAAAATTTTGAGAGGTGAGAATAAGAGCTTCATTTGTGTAAATGAGTGCAAACAGAGTGGCCTAAAATTCCTTGAGTGTATACACGTGAGAGAGTGTTGTGAGGTCCTTCGTATTTCCATAACTTATTTTTTTGCAGCAAAGTTTCACAAATAGATTTGAGGACGAATCCTCTTGAAGAAGTGGAGAATGATATGAACCAAGAGACATCAATCATACAATATGCTTCAATGAAGATGTGAAGAAAAAGTTGTCAAAATTATCAAAAGATGTTTCAATTCATGCTACATTTGAGAAGAATAAAGTTTGATTGTTGTAAATTTTGGGTGGGTTATAATTTAGAGTAATTTAGAGTTATTGTATTTTAAGACTTTTTATTTCATTTAGGTTACAATTACCTATTGGCTAATTATGACCATTTAAGTATGAATGTTACACCTCTTGGAATGCCTTCAATAGTTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAAGGGAGACTTGGAAAATATATTAAAAGAAGCATTTGTGCTTTTCTTTAGCCAATGGCTAAGTTTCTTTGCAACTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCGACATAATCAATCTTGCTTGTGGAGTGATTCGAATCTCAATCAAGTGTTCTTGCGTTGAGATATTTGATCAATAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGAGTGATTCGAATCTCAAACAATGTTCTTGTCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCTCCCCTTGTAGTTGATTCGTTATCGTATCAGTGGGTTACAATTTAGAGTAATTTAGAGTTATTGTATTTTAAGACATTTTATTTACTTTAGGTTACATTTATATAATGGCTAATTATGGTCATTAAGTATGAATGTTACAACTTTTGGAATGCCTTTAATAGTTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAAGAAAGACTTGGAAAATATAGTAAAAGAAGCATTTGTGCTCTTCTTTAGCCAATGGCTAAGTTTCTTTGCAATTCTATGTAGTTTAGGTTGCATGTAGAATCATTCAAGCTCTACATGATCAATCTTGCTTGTGGAATGATTCGAATCTCAATCAAGTGTTCTTGCGTTGAGATATTTGATCAACAAGAATCATTGAAGCTAGACATGATCGATCTTGCTTGTGGAGTGATTCGAATCTCAAACAATATTCTTGTCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTTCCCTTGTAGTTGATTCCTTATCTTTTCAGTGAAGGAGAAAGAGAAGTTCAATCTGGTTCAGGAGCAGATCCTACAGTTTCCCTTATTTACTGTTCAATCCGGGAAGAGAATAGAAACAAAGGGAGAGGAGTGAGGTCTCTCTCTTTCCTTCCGAATTCCCTCAGTCAGAAATGGCCTAAAAAATAGGGAGAGGACAATCAGTTTACTCTTCAATCTCGCTCAGTGAAGTAGTTCAGGCAATGGAATAGTTCAACATCAGTCAAAGAAGAATCCCCCAGTTTACCTTGTTCCAGAGTTCCATCAGGTTCAGGAAGTAGTGAAGGAGTCTACAGAATAGGTTTAAGAATAAATAGATGATTGAGTGAGACCGATCCTAGTTTACCTCCTTCCGGTCAGGGCATAGACGAAAAGGAGTGAGCTTCCCTTTCTTACAGGGGAAAGAGTAAAAGAGTGAAATCCGGAAGGGAGAGGAGCAAAGCAACGAGACCGTAAGCTTTACCGAGTCAAATAATAGTTCAACCCTCGTTCAATCAGGAAAAGGGTCGAAGACGCTCGACGAGAAAAGGGAGGAGAGGGTTTCGGGTCTCCTTCATCTCTTTGTCTTTTACCTCAATAAATAAGGCAAGGGAATGCAGGTTCGTTCACTCTCATTCTATCTCTTATCTTTGATTTACTCTACCTTCAAAGACTGTAACCTCGGTTCAGGTTCATTAGCTGCTTTACCTCCTTCCGGGAAGGGCATATCGGTGAACAATCACTTCCTTTCCTTTTCATAACGAACAATAACGGAATAGAGTAGAGGTTCAAGGGCAGGTTCATCAGCTTCTCTCTCTTGAGTTCCGGGGAAGGGAAGTAGTTCGGGAGCAAAGAGAACATCCTTGAATTGAATTTGTTTACAGGAGAGTACGTCAGGGAAAGAAGGGACAAGGGAAGGAGTGAAAGCAAGAAGGTTCATGAGTTTACAGTTCAAGAATACATAG

mRNA sequence

CTGGTCGTAACCAAGAAAGAACCCCTTGGTTTCGGTGGGAATGCCCGACTTATCCATTTAGACGGTAAACTACTGGAGGCGGGCTCATGTAGCCCATGCCAGATTAATCGTATTCTGTTATGGGCCGAAGCAATGAACCTATTCGAAGTGGCTCATTTTATACCTAAGAAGCCCATCTATGAACAAAGATCCATTTTCCTTCCCCGCACGCCTAGCTACTACTCTAGGGGCCGACTGGACCCGAAGCTTCTCAAGCTCAACCAACCGTTTATGTTTGTAAGACCTCTTGTAGCTAACATTGGATCAAGGACCTACTCTACTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCATAGAGAAAAGGCATTTTGAGGGGAGAGATAGAAAGAAAGAGACTATGTGCTTTTGGGATCTACGTGCTCCTTGGTTAGAACCAATAAGGGGTCCTAATCGTTTGGACTTGAAAATAAGGGAAGGGAAGGGAATACAGGGGCAGGGGAAGGAGTTCCATCCGGGAGAGCACTCAGGTAATATCGGTGAAGGAGAAAGATTAGTTCAAGAGTTCAATCTATCTGGTTCAGTAGTTTACCGGGTGAAATCAGGTTCAGTTCCATCTGGGAAGGGAATACTGTCATTCCGGACAGGAGAGGAAAAGAAGAATATAGTCGTCCAGTTTACCCTCTTCAATCAGGAGAGTACGTCAGGGAAAGAAGGGACAAGGGAAGGAGTGAAAGCAAGAAGGTTCATGAGTTTACAGTTCAAGAATACATAG

Coding sequence (CDS)

CTGGTCGTAACCAAGAAAGAACCCCTTGGTTTCGGTGGGAATGCCCGACTTATCCATTTAGACGGTAAACTACTGGAGGCGGGCTCATGTAGCCCATGCCAGATTAATCGTATTCTGTTATGGGCCGAAGCAATGAACCTATTCGAAGTGGCTCATTTTATACCTAAGAAGCCCATCTATGAACAAAGATCCATTTTCCTTCCCCGCACGCCTAGCTACTACTCTAGGGGCCGACTGGACCCGAAGCTTCTCAAGCTCAACCAACCGTTTATGTTTGTAAGACCTCTTGTAGCTAACATTGGATCAAGGACCTACTCTACTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCATAGAGAAAAGGCATTTTGAGGGGAGAGATAGAAAGAAAGAGACTATGTGCTTTTGGGATCTACGTGCTCCTTGGTTAGAACCAATAAGGGGTCCTAATCGTTTGGACTTGAAAATAAGGGAAGGGAAGGGAATACAGGGGCAGGGGAAGGAGTTCCATCCGGGAGAGCACTCAGGTAATATCGGTGAAGGAGAAAGATTAGTTCAAGAGTTCAATCTATCTGGTTCAGTAGTTTACCGGGTGAAATCAGGTTCAGTTCCATCTGGGAAGGGAATACTGTCATTCCGGACAGGAGAGGAAAAGAAGAATATAGTCGTCCAGTTTACCCTCTTCAATCAGGAGAGTACGTCAGGGAAAGAAGGGACAAGGGAAGGAGTGAAAGCAAGAAGGTTCATGAGTTTACAGTTCAAGAATACATAG
Homology
[Close]
BLAST of CmoCh13G003110 vs. Swiss-Prot
Match: PSBC_PIPCE (Photosystem II CP43 reaction center protein OS=Piper cenocladum GN=psbC PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 44/72 (61.11%), Postives = 48/72 (66.67%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDL 157
           LEP+RGPN LDL
Sbjct: 373 LEPLRGPNGLDL 377

[Close]
BLAST of CmoCh13G003110 vs. Swiss-Prot
Match: PSBC_CUCSA (Photosystem II CP43 reaction center protein OS=Cucumis sativus GN=psbC PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 49/81 (60.49%), Postives = 52/81 (64.20%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L ANIGS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANIGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPN LDL  R  K IQ
Sbjct: 373 LEPLRGPNGLDLS-RLKKDIQ 385

[Close]
BLAST of CmoCh13G003110 vs. Swiss-Prot
Match: PSBC_DIOEL (Photosystem II CP43 reaction center protein OS=Dioscorea elephantipes GN=psbC PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 44/72 (61.11%), Postives = 48/72 (66.67%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDL 157
           LEP+RGPN LDL
Sbjct: 373 LEPLRGPNGLDL 377

[Close]
BLAST of CmoCh13G003110 vs. Swiss-Prot
Match: PSBC_ANGEV (Photosystem II CP43 reaction center protein OS=Angiopteris evecta GN=psbC PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 45/72 (62.50%), Postives = 48/72 (66.67%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L ANIGS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANIGS-AQGPTGLGKYLMRSPTGEII-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDL 157
           LEP+RGPN LDL
Sbjct: 373 LEPLRGPNGLDL 377

[Close]
BLAST of CmoCh13G003110 vs. Swiss-Prot
Match: PSBC_MAIZE (Photosystem II CP43 reaction center protein OS=Zea mays GN=psbC PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 44/72 (61.11%), Postives = 48/72 (66.67%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDL 157
           LEP+RGPN LDL
Sbjct: 373 LEPLRGPNGLDL 377

[Close]
BLAST of CmoCh13G003110 vs. TrEMBL
Match: A0A0D3M635_9ASPA (Photosystem II CP43 reaction center protein OS=Paphiopedilum niveum GN=psbC PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.3e-11
Identity = 48/81 (59.26%), Postives = 53/81 (65.43%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT+E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQHLGANVGS-AQGPTGLGKYLMRSPTVEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPN LDL  R  K IQ
Sbjct: 373 LEPLRGPNGLDLS-RLKKDIQ 385

[Close]
BLAST of CmoCh13G003110 vs. TrEMBL
Match: K9SD42_9CYAN (Photosystem II CP43 reaction center protein OS=Pseudanabaena sp. PCC 7367 GN=psbC PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 1 

Query: 87  NQPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAP 146
           +Q F F+   + L ANIG+ +   TGLGKYLMRSPT E   F G     ETM FWDLRAP
Sbjct: 301 SQAFTFIVRDQKLGANIGT-SQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAP 360

Query: 147 WLEPIRGPNRLDL 157
           WLEP+RGPN LD+
Sbjct: 361 WLEPLRGPNGLDI 366

[Close]
BLAST of CmoCh13G003110 vs. TrEMBL
Match: A0A059PSP6_FRAVE (Photosystem II CP43 reaction center protein OS=Fragaria vesca subsp. bracteata GN=psbC PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 48/81 (59.26%), Postives = 52/81 (64.20%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVX-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPN LDL  R  K IQ
Sbjct: 373 LEPLRGPNGLDLS-RLKKDIQ 385

[Close]
BLAST of CmoCh13G003110 vs. TrEMBL
Match: W5ED35_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 59/129 (45.74%), Postives = 69/129 (53.49%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 157 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 216

Query: 148 LEPIRGPNRLDLKIREGKGIQGQGKEFHPGEHSGNIGEGERLVQEFNLSGSVVYRVKSGS 207
           LEP+RGPN LDL  R  K IQ   KE H  E+  +   G       N  G V   + + +
Sbjct: 217 LEPLRGPNGLDLS-RLKKDIQ-PWKERHSAEYMTHAPLG-----SLNSMGGVATEINAVN 271

Query: 208 VPSGKGILS 214
             S +  LS
Sbjct: 277 YVSPRSWLS 271

[Close]
BLAST of CmoCh13G003110 vs. TrEMBL
Match: A0A078HPI2_BRANA (Photosystem II CP43 reaction center protein OS=Brassica napus GN=BnaC03g60960D PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 44/73 (60.27%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 510 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 569

Query: 148 LEPIRGPNRLDLK 158
           LEP+RGPN LDL+
Sbjct: 570 LEPLRGPNGLDLR 575

[Close]
BLAST of CmoCh13G003110 vs. TAIR10
Match: ATCG00280.1 (ATCG00280.1 photosystem II reaction center protein C)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13
Identity = 48/81 (59.26%), Postives = 52/81 (64.20%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPN LDL  R  K IQ
Sbjct: 373 LEPLRGPNGLDLS-RLKKDIQ 385

[Close]
BLAST of CmoCh13G003110 vs. NCBI nr
Match: gi|806636712|ref|YP_009129614.1| (photosystem II 44 kDa protein (chloroplast) [Paphiopedilum niveum])

HSP 1 Score: 76.3 bits (186), Expect = 9.0e-11
Identity = 48/81 (59.26%), Postives = 53/81 (65.43%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT+E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQHLGANVGS-AQGPTGLGKYLMRSPTVEVI-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPN LDL  R  K IQ
Sbjct: 373 LEPLRGPNGLDLS-RLKKDIQ 385

[Close]
BLAST of CmoCh13G003110 vs. NCBI nr
Match: gi|985438599|ref|XP_015383608.1| (PREDICTED: uncharacterized protein LOC102608211 [Citrus sinensis])

HSP 1 Score: 74.7 bits (182), Expect = 2.6e-10
Identity = 48/81 (59.26%), Postives = 53/81 (65.43%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ET+ FWDLRAPW
Sbjct: 388 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETIHFWDLRAPW 447

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPNRLDL  R  K IQ
Sbjct: 448 LEPLRGPNRLDLS-RLKKDIQ 460

[Close]
BLAST of CmoCh13G003110 vs. NCBI nr
Match: gi|511265681|gb|AGN71790.1| (photosystem II CP43 chlorophyll apoprotein [Fragaria vesca subsp. bracteata])

HSP 1 Score: 74.3 bits (181), Expect = 3.4e-10
Identity = 48/81 (59.26%), Postives = 52/81 (64.20%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 313 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVX-FGG-----ETMRFWDLRAPW 372

Query: 148 LEPIRGPNRLDLKIREGKGIQ 166
           LEP+RGPN LDL  R  K IQ
Sbjct: 373 LEPLRGPNGLDLS-RLKKDIQ 385

[Close]
BLAST of CmoCh13G003110 vs. NCBI nr
Match: gi|504976409|ref|WP_015163511.1| (photosystem II 44 kDa subunit reaction center protein [Pseudanabaena sp. PCC 7367])

HSP 1 Score: 74.3 bits (181), Expect = 3.4e-10
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 1 

Query: 87  NQPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAP 146
           +Q F F+   + L ANIG+ +   TGLGKYLMRSPT E   F G     ETM FWDLRAP
Sbjct: 301 SQAFTFIVRDQKLGANIGT-SQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAP 360

Query: 147 WLEPIRGPNRLDL 157
           WLEP+RGPN LD+
Sbjct: 361 WLEPLRGPNGLDI 366

[Close]
BLAST of CmoCh13G003110 vs. NCBI nr
Match: gi|674893348|emb|CDY39486.1| (BnaC03g60960D [Brassica napus])

HSP 1 Score: 74.3 bits (181), Expect = 3.4e-10
Identity = 44/73 (60.27%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 88  QPFMFV---RPLVANIGSRTYSTTGLGKYLMRSPTIEKRHFEGRDRKKETMCFWDLRAPW 147
           Q F F+   + L AN+GS     TGLGKYLMRSPT E   F G     ETM FWDLRAPW
Sbjct: 510 QAFTFLVRDQRLGANVGS-AQGPTGLGKYLMRSPTGEVI-FGG-----ETMRFWDLRAPW 569

Query: 148 LEPIRGPNRLDLK 158
           LEP+RGPN LDL+
Sbjct: 570 LEPLRGPNGLDLR 575

The following BLAST results are available for this feature:
BLAST of CmoCh13G003110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSBC_PIPCE2.8e-1261.11Photosystem II CP43 reaction center protein OS=Piper cenocladum GN=psbC PE=3 SV=... [more]
PSBC_CUCSA2.8e-1260.49Photosystem II CP43 reaction center protein OS=Cucumis sativus GN=psbC PE=3 SV=1[more]
PSBC_DIOEL2.8e-1261.11Photosystem II CP43 reaction center protein OS=Dioscorea elephantipes GN=psbC PE... [more]
PSBC_ANGEV2.8e-1262.50Photosystem II CP43 reaction center protein OS=Angiopteris evecta GN=psbC PE=3 S... [more]
PSBC_MAIZE2.8e-1261.11Photosystem II CP43 reaction center protein OS=Zea mays GN=psbC PE=1 SV=1[more]
BLAST of CmoCh13G003110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D3M635_9ASPA6.3e-1159.26Photosystem II CP43 reaction center protein OS=Paphiopedilum niveum GN=psbC PE=3... [more]
K9SD42_9CYAN2.4e-1058.90Photosystem II CP43 reaction center protein OS=Pseudanabaena sp. PCC 7367 GN=psb... [more]
A0A059PSP6_FRAVE2.4e-1059.26Photosystem II CP43 reaction center protein OS=Fragaria vesca subsp. bracteata G... [more]
W5ED35_WHEAT2.4e-1045.74Uncharacterized protein OS=Triticum aestivum PE=4 SV=1[more]
A0A078HPI2_BRANA2.4e-1060.27Photosystem II CP43 reaction center protein OS=Brassica napus GN=BnaC03g60960D P... [more]
BLAST of CmoCh13G003110 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00280.12.1e-1359.26ATCG00280.1 photosystem II reaction center protein C[more]
BLAST of CmoCh13G003110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|806636712|ref|YP_009129614.1|9.0e-1159.26photosystem II 44 kDa protein (chloroplast) [Paphiopedilum niveum][more]
gi|985438599|ref|XP_015383608.1|2.6e-1059.26PREDICTED: uncharacterized protein LOC102608211 [Citrus sinensis][more]
gi|511265681|gb|AGN71790.1|3.4e-1059.26photosystem II CP43 chlorophyll apoprotein [Fragaria vesca subsp. bracteata][more]
gi|504976409|ref|WP_015163511.1|3.4e-1058.90photosystem II 44 kDa subunit reaction center protein [Pseudanabaena sp. PCC 736... [more]
gi|674893348|emb|CDY39486.1|3.4e-1060.27BnaC03g60960D [Brassica napus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000932PS_antenna-like
Vocabulary: Biological Process
TermDefinition
GO:0019684photosynthesis, light reaction
GO:0009767photosynthetic electron transport chain
Vocabulary: Cellular Component
TermDefinition
GO:0009521photosystem
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016168chlorophyll binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0044425 membrane part
cellular_component GO:0009521 photosystem
cellular_component GO:0009536 plastid
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G003110.1CmoCh13G003110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000932Photosystem antenna protein-likePFAMPF00421PSIIcoord: 12..69
score: 4.
IPR000932Photosystem antenna protein-likeunknownSSF161077Photosystem II antenna protein-likecoord: 102..157
score: 1.02E-5coord: 12..69
score: 3.2
NoneNo IPR availableGENE3DG3DSA:1.10.10.670coord: 96..157
score: 2.7
NoneNo IPR availablePANTHERPTHR33180FAMILY NOT NAMEDcoord: 9..68
score: 4.5
NoneNo IPR availablePANTHERPTHR33180:SF4PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEINcoord: 9..68
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh13G003110CmoCh12G007570Cucurbita moschata (Rifu)cmocmoB135
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G003110Watermelon (97103) v2cmowmbB198
CmoCh13G003110Wax gourdcmowgoB0259
CmoCh13G003110Cucumber (Gy14) v1cgycmoB0594
CmoCh13G003110Cucurbita maxima (Rimu)cmacmoB179
CmoCh13G003110Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G003110Wild cucumber (PI 183967)cmocpiB192
CmoCh13G003110Cucumber (Chinese Long) v2cmocuB188
CmoCh13G003110Watermelon (Charleston Gray)cmowcgB179
CmoCh13G003110Watermelon (97103) v1cmowmB186
CmoCh13G003110Cucurbita pepo (Zucchini)cmocpeB200
CmoCh13G003110Bottle gourd (USVL1VR-Ls)cmolsiB203
CmoCh13G003110Cucumber (Gy14) v2cgybcmoB057
CmoCh13G003110Melon (DHL92) v3.6.1cmomedB203
CmoCh13G003110Cucumber (Chinese Long) v3cmocucB0221