CmoCh13G000950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr13 : 550785 .. 553121 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAGTAGAGGCCAAGAGGGATTCAAAAGCTCATATCTTGATAGATACTGTAGGCTGAGGATATCGTTGCTTTCGCTTGTATATAGAACCAGAAAAGTCGGGCCACAGATCTCTGCGTTCTTCAAAGCCACCTCTCACCTAACCCCACGGCGGCCGGCCACCGGCGGACTGAACCCACACTCCCAAACAGCCTGTTCTGTAACTGTAACCATAAAAATATTTCATTGGACTCCTTCATGGACTACAAAGTCCAAATCTACGGCGCTTAAATTTCCATTTTCAATCTCTCTGTCTCTGTCTCTGTCTCTCTGTTATTTTCTCTCTCTGTGAGCACCAAGGAGAGGACATGGCGGCAGACCCGGAAGGCAGAGAGTTTAAGTTTTACTCACAGTTTCAGGCTGAGCATGGAAATAAGCAGAACCCCTTTGAAGGAGACAATTGGTCGAGCTATTATGGACGGTCTGATTCATTTCTCAGCTTCAGCTCAAAGGTGGAATCAGAGATTGAAAGTGATAAAGATGACGGCGGCAGCGGCGGCGGCGATGATGATGATTATACAGCTGAGTTAAGTCGGCGTATGGCTCAGTACATGCTTCAAGATGATGATAACTCCTCCATTGAAAGCTTTCAACCTGAGATACAGCACAAGGTATTGAATTTAGTAAGGAGTGGAAGAGATTTCAGGGCGTTTGTCAAATTCCTTGTTCCTCTGTTTTCATTATTTTGTGGGTGTCTTCTGTTTTGGGTAGCCATGGGGTTTGTCTAGTTCGCCAATTTCAACGCTGTGGTCACCACTAGGCTCTAGCGCTGGGAGCAGCTACGGAAGTCCAGAAGGGCCTTCCAAGGAGCCATCGCCGCCATCGACGCCGGTGGTTGTAGAGCGTGGAGGGCTGGATATTTCACACAACGTTTTCAGCAAACTGGAGAAGATGAAAAAATTTAGCACAAATGATAAATCAATCCAAACAAGCCCCCAACATGGAGGAACCAGATCTTCCTCTTCCAAAGTGAGATGAAATTCAAATCCATCTCAGCCCCCTCAGCTCCCAAATCTCTCTGTTTCTTACACTCTTTTTTTGCTGATTCAAAACTCAACCCTCCTTGTAGAATCAGAAGCGGAGGCAGAACCAGCAGCAGCAGCAGTTTATGAAGCAAAAAAGCTCCGCCGCGACACAAGCCAAGCAGGCTCAAGGAAGCACCTCACAAGCCAATTCAGGGGCAAAACCAGGAGGAGGGTCATCGGGGACAGGAGTGTTCTTGCCCCGCCATGTCAACTACAACCGTCCAGCACCATGTCCTCAGCCACCACAGCCGCCCAAGAAAAAGGGTAATATCTCCTTTCATTCAATAAGTAGCTGGTTTTTTAAGTCATTTCTTAGTTGGAGTTAACCTCGTGTAACAGTCCAAGTCCATCACTATTAGATGTCGTTTGCTTTTAACCCGTTATCTATTGCTGTCTGTTTCACGGTTTTAAAACTCGTCTATAGAGGTTTCCACACCTTAAGGAATGTTTTGTTCTTCTCTCCAACCGATGTGAGATCTCACAATTCACCTCCTTTGGGGACCCAACGTCCTCGCTAGCATACCGTTCGGTGTCTGGCTCTGATACCATTTGTAGTAGTCCAAGCTCACCGGTAGCAGATATTGTCCGCTTCGGCTCATTACCTATTGCTGTCAGCCTTGCGGTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGTAATGTTTCGTTCCTCTCTCCAACGGACGTGGCATCTCACAACCCATTTGTTGGGATTTTCCATCTATGAATTGCCATTGAAACCATTACTGTGATGCATTTTGGGACTTCTCCTCATACCGCTCCTTTTATTTTTCTTATCTTTCCTTGGATTCATAGAGATTCCGTGTCCTCCCAAATGCTTTGAATCTACAAGACCTCCAACCATTCACGGTTGGGCCGACAAAACTTGTCCACTTCTTTGATGGAATCTTCAACCATCCCTTTAAAAGGAGGTGGCTGACAACGACACCCAATTGAATCATTAAACCACTTGCACTGCCCGCTATAGTTAAATTCTGTAATGGAGATGCGTTGTCTTCCCATACAAGGCAAAACACTAAGCAAATTGATCATTTTCCCTCCCCTTCCCTATCTCAGGCTGCTCCACTGTTCTAATACCCGTGAGAGTCCTACAAGCCTTACAACTTCACTACGACAGAATGGACAACGAGACAAGAGAAAAGATCACTGGCTTCACAGCTTTAAGAGGTAAATTTTCAATTTCCTATCACAAAATTCTCTGTGGCATTTTCACAAACAGTTTGCGGTCGTTCCACACATAA

mRNA sequence

TGAAAGTAGAGGCCAAGAGGGATTCAAAAGCTCATATCTTGATAGATACTGTAGGCTGAGGATATCGTTGCTTTCGCTTGTATATAGAACCAGAAAAGTCGGGCCACAGATCTCTGCGTTCTTCAAAGCCACCTCTCACCTAACCCCACGGCGGCCGGCCACCGGCGGACTGAACCCACACTCCCAAACAGCCTGTTCTGTAACTGTAACCATAAAAATATTTCATTGGACTCCTTCATGGACTACAAAGTCCAAATCTACGGCGCTTAAATTTCCATTTTCAATCTCTCTGTCTCTGTCTCTGTCTCTCTGTTATTTTCTCTCTCTGTGAGCACCAAGGAGAGGACATGGCGGCAGACCCGGAAGGCAGAGAGTTTAAGTTTTACTCACAGTTTCAGGCTGAGCATGGAAATAAGCAGAACCCCTTTGAAGGAGACAATTGGTCGAGCTATTATGGACGGTCTGATTCATTTCTCAGCTTCAGCTCAAAGGTGGAATCAGAGATTGAAAGTGATAAAGATGACGGCGGCAGCGGCGGCGGCGATGATGATGATTATACAGCTGAGTTAAGTCGGCGTATGGCTCAGTACATGCTTCAAGATGATGATAACTCCTCCATTGAAAGCTTTCAACCTGAGATACAGCACAAGCCATGGGGTTTGTCTAGTTCGCCAATTTCAACGCTGTGGTCACCACTAGGCTCTAGCGCTGGGAGCAGCTACGGAAGTCCAGAAGGGCCTTCCAAGGAGCCATCGCCGCCATCGACGCCGGTGGTTGTAGAGCGTGGAGGGCTGGATATTTCACACAACGTTTTCAGCAAACTGGAGAAGATGAAAAAATTTAGCACAAATGATAAATCAATCCAAACAAGCCCCCAACATGGAGGAACCAGATCTTCCTCTTCCAAAAATCAGAAGCGGAGGCAGAACCAGCAGCAGCAGCAGTTTATGAAGCAAAAAAGCTCCGCCGCGACACAAGCCAAGCAGGCTCAAGGAAGCACCTCACAAGCCAATTCAGGGGCAAAACCAGGAGGAGGGTCATCGGGGACAGGAGTGTTCTTGCCCCGCCATGTCAACTACAACCGTCCAGCACCATGTCCTCAGCCACCACAGCCGCCCAAGAAAAAGGGCTGCTCCACTGTTCTAATACCCGTGAGAGTCCTACAAGCCTTACAACTTCACTACGACAGAATGGACAACGAGACAAGAGAAAAGATCACTGGCTTCACAGCTTTAAGAGGTAAATTTTCAATTTCCTATCACAAAATTCTCTGTGGCATTTTCACAAACAGTTTGCGGTCGTTCCACACATAA

Coding sequence (CDS)

ATGGCGGCAGACCCGGAAGGCAGAGAGTTTAAGTTTTACTCACAGTTTCAGGCTGAGCATGGAAATAAGCAGAACCCCTTTGAAGGAGACAATTGGTCGAGCTATTATGGACGGTCTGATTCATTTCTCAGCTTCAGCTCAAAGGTGGAATCAGAGATTGAAAGTGATAAAGATGACGGCGGCAGCGGCGGCGGCGATGATGATGATTATACAGCTGAGTTAAGTCGGCGTATGGCTCAGTACATGCTTCAAGATGATGATAACTCCTCCATTGAAAGCTTTCAACCTGAGATACAGCACAAGCCATGGGGTTTGTCTAGTTCGCCAATTTCAACGCTGTGGTCACCACTAGGCTCTAGCGCTGGGAGCAGCTACGGAAGTCCAGAAGGGCCTTCCAAGGAGCCATCGCCGCCATCGACGCCGGTGGTTGTAGAGCGTGGAGGGCTGGATATTTCACACAACGTTTTCAGCAAACTGGAGAAGATGAAAAAATTTAGCACAAATGATAAATCAATCCAAACAAGCCCCCAACATGGAGGAACCAGATCTTCCTCTTCCAAAAATCAGAAGCGGAGGCAGAACCAGCAGCAGCAGCAGTTTATGAAGCAAAAAAGCTCCGCCGCGACACAAGCCAAGCAGGCTCAAGGAAGCACCTCACAAGCCAATTCAGGGGCAAAACCAGGAGGAGGGTCATCGGGGACAGGAGTGTTCTTGCCCCGCCATGTCAACTACAACCGTCCAGCACCATGTCCTCAGCCACCACAGCCGCCCAAGAAAAAGGGCTGCTCCACTGTTCTAATACCCGTGAGAGTCCTACAAGCCTTACAACTTCACTACGACAGAATGGACAACGAGACAAGAGAAAAGATCACTGGCTTCACAGCTTTAAGAGGTAAATTTTCAATTTCCTATCACAAAATTCTCTGTGGCATTTTCACAAACAGTTTGCGGTCGTTCCACACATAA

Homology

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BLAST of CmoCh13G000950 vs. TrEMBL
Match: A0A0A0M0L9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G525320 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.6e-109
Identity = 229/287 (79.79%), Postives = 241/287 (83.97%), Query Frame = 1


Query: 23  KQNPFEGDNWSSYYGRSDSFLSFSSKVESEI-----ESDKDDGGSGGGDDDDYTAELSRR 82
           +QNPFEGD+W SY+GRSDSFLSF+S VESEI     ESD+DDG + G   DDYTAELSRR
Sbjct: 2   QQNPFEGDSWPSYFGRSDSFLSFNSPVESEIGSYEIESDRDDGENDG---DDYTAELSRR 61

Query: 83  MAQYMLQDDDNSSIESFQPEIQHKPWGLSSSPISTLWSPLGSSAGSSYGSPEGPSKEPSP 142
           MAQYMLQDDDNSS  SFQ EIQ+K WGLS SPISTLWSPLGSS GSS+GSPEGPSKEPSP
Sbjct: 62  MAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLWSPLGSSTGSSHGSPEGPSKEPSP 121

Query: 143 PSTPVVVERGGLDISHNVFSKLEKMKKFSTNDKSIQTSPQHGGTRSSSS-------KNQK 202
           PSTPVV E G LDISHNVFSKLEKMKK S N KSIQTS Q G T SSSS       KNQK
Sbjct: 122 PSTPVVEECGELDISHNVFSKLEKMKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQK 181

Query: 203 RRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKPGGGSSGTGVFLPRHVNYNRPAPC 262
           RRQNQQQQQFMKQK S   Q KQAQGS+ QANSGAK   G SGTGVFLPRHVNY+RPAPC
Sbjct: 182 RRQNQQQQQFMKQKGSGTIQVKQAQGSSLQANSGAK-SVGPSGTGVFLPRHVNYSRPAPC 241

Query: 263 PQPPQPPKKKGCSTVLIPVRVLQALQLHYDRMDNETREKITGFTALR 298
           PQPPQPPKKKGCSTVLIPVRVLQALQ HYDRMD+ETR+KITGFTALR
Sbjct: 242 PQPPQPPKKKGCSTVLIPVRVLQALQHHYDRMDDETRQKITGFTALR 284

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BLAST of CmoCh13G000950 vs. TrEMBL
Match: R0GRF7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026875mg PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15
Identity = 82/241 (34.02%), Postives = 114/241 (47.30%), Query Frame = 1


Query: 44  SFSSKVESEIESDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPW 103
           SF +   S +  + D       D+DDY  EL+R+M  YMLQDD+           + +  
Sbjct: 23  SFFTPSTSSLSDEPDSPKPQNEDEDDYITELTRQMTNYMLQDDEKHQ--------KSRSG 82

Query: 104 GLSSSPISTLWSPLGSSAGSSYGSPEGPSKEPSPPSTPVVVE-RGGLDISHNVFSKLEKM 163
           G S SP STLWSP  S     Y SP GPS+EPSPP TP V      +D          K 
Sbjct: 83  GGSGSPQSTLWSPFASG----YSSPIGPSREPSPPLTPTVETIMAKVDTKPVTIPFQSKQ 142

Query: 164 KKFSTNDKSIQTSPQHGGTRSSSSKNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQAN 223
                  +SIQ +           K +K ++ ++    M+ K+    Q +   G  +   
Sbjct: 143 ALIDDQIRSIQAN-------FHKIKKEKEKEKKRNDDVMRNKARNYQQQRPRSGVKAVFV 202

Query: 224 SGA-KPGGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQLHYDR 283
            G+    GGS GTGVFLPR              +P KK GCSTV+IP RV++AL++H+D+
Sbjct: 203 DGSGSRTGGSGGTGVFLPRSHG--------TVMEPRKKSGCSTVIIPARVVEALKVHFDK 236

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BLAST of CmoCh13G000950 vs. TrEMBL
Match: A0A078DJA6_BRANA (BnaA03g09600D protein OS=Brassica napus GN=BnaA03g09600D PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-15
Identity = 82/244 (33.61%), Postives = 119/244 (48.77%), Query Frame = 1


Query: 44  SFSSKVESEIESDKDDGG--SGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHK 103
           +F +   S + SD D     +   D+D+Y AEL+R+M  YMLQDD          E   K
Sbjct: 22  TFFTPTTSSLRSDSDTASLKTQNEDEDEYVAELTRQMTSYMLQDD----------ETHQK 81

Query: 104 PWGLSS---SPISTLWSPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSK 163
            +G  S   SP STLWSP  +     Y SP GPS+EPSPP TP V  +  ++ S  +   
Sbjct: 82  SYGSGSGSGSPQSTLWSPFAAG----YSSPVGPSREPSPPLTPAV--QATVEKSPVIIPF 141

Query: 164 LEKMKKFSTNDKSIQTSPQHGGTRSSSSKNQKRRQNQQQQQFMKQKSSAATQAKQAQGST 223
             K        +S+Q + Q         +N    +++++     Q+  +A +A    G  
Sbjct: 142 QSKQALIDEQIRSVQANFQKIKKEKDKERNDDALRHKERSYHNLQRPKSAVKAVFVDGLG 201

Query: 224 SQANSGAKPGGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQLH 283
           S+A SG        GTGVFLPR              +  KK GCSTV+IP RV++AL++H
Sbjct: 202 SRAGSG--------GTGVFLPRSHG--------TVMESRKKSGCSTVIIPARVVEALKIH 233

[Close]

BLAST of CmoCh13G000950 vs. TrEMBL
Match: A0A078C2V9_BRANA (BnaC03g12110D protein OS=Brassica napus GN=BnaC03g12110D PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.5e-14
Identity = 80/232 (34.48%), Postives = 112/232 (48.28%), Query Frame = 1


Query: 54  ESDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPWGLSS---SPI 113
           +SD D       D+D+Y AEL+R+M  YMLQDD+             K  G  S   SP 
Sbjct: 34  DSDPDSPKPQNEDEDEYVAELTRQMTNYMLQDDEK----------HQKSCGGGSGSGSPQ 93

Query: 114 STLWSPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSKLEKMKKFSTNDK 173
           STLWSP  S     Y SP GPS+EPSPP TP V  +  ++ S  +     K        +
Sbjct: 94  STLWSPFASG----YSSPVGPSREPSPPLTPAV--QATVEKSPVIIPFQSKQALIDEQIR 153

Query: 174 SIQTSPQHGGTRSSSSKNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKPGGG 233
           S+Q + Q         +N    + +++     Q+  +A +A    G  S+A SG      
Sbjct: 154 SVQANFQKIKKEKDKERNDDALRRKERSYHNLQRPKSAVKAVFVDGLGSRAGSG------ 213

Query: 234 SSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQLHYDRM 283
             GTGVFLPR              +  KK GCSTV+IP RV++AL++H+D++
Sbjct: 214 --GTGVFLPRCHG--------TVVESRKKSGCSTVIIPARVVEALKIHFDKL 233

[Close]

BLAST of CmoCh13G000950 vs. TrEMBL
Match: M4CR85_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.5e-14
Identity = 80/232 (34.48%), Postives = 112/232 (48.28%), Query Frame = 1


Query: 54  ESDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPWGLSS---SPI 113
           +SD D        +D+Y AEL+R+M  YMLQDD          E   K  G  S   SP 
Sbjct: 34  DSDPDSPKPQNEGEDEYVAELTRQMTSYMLQDD----------ETHQKSCGGGSGSGSPQ 93

Query: 114 STLWSPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSKLEKMKKFSTNDK 173
           STLWSP  S     Y SP GPS+EPSPP TP V  +  ++ S  +     K        +
Sbjct: 94  STLWSPFASG----YSSPVGPSREPSPPLTPAV--QATVEKSPVIIPFQSKQALIDEQIR 153

Query: 174 SIQTSPQHGGTRSSSSKNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKPGGG 233
           S+Q + Q         +N    +++++     Q+  +A +A    G  S+A SG      
Sbjct: 154 SVQANFQKIKKEKDKERNDDALRHKEKSYHNLQRPKSAVKAVFVDGLGSRAGSG------ 213

Query: 234 SSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQLHYDRM 283
             GTGVFLPR              +  KK GCSTV+IP RV++AL++H+D++
Sbjct: 214 --GTGVFLPRSHG--------TVMESGKKSGCSTVIIPARVVEALKIHFDKL 233

[Close]

BLAST of CmoCh13G000950 vs. TAIR10
Match: AT5G59050.1 (AT5G59050.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-14
Identity = 81/251 (32.27%), Postives = 111/251 (44.22%), Query Frame = 1


Query: 42  FLSFSSKVESEIESDKDDGGSGGGDD--DDYTAELSRRMAQYMLQDDDNSSIESFQPEIQ 101
           F   +S +  +  SD+ D      +D  D+Y  EL+R+M  YMLQDD+           Q
Sbjct: 25  FTPTTSSLRPDFVSDEPDSPKAKNEDEEDEYITELTRQMTNYMLQDDEKH---------Q 84

Query: 102 HKPWGLSSSPISTLWSPLGSSAGSSYGSPEGPSKEPSPPSTPVVVE----RGGLDISHNV 161
                 S SP STLWSP      S   SP GPS+EPSPP TP  V        +D     
Sbjct: 85  KSCGSGSGSPQSTLWSPF----ASGLSSPIGPSREPSPPLTPATVPVEKIMTKIDTKPVT 144

Query: 162 FSKLEKMKKFSTNDKSIQTSPQHGGTRSSSSKNQKRRQNQQQQQFMKQKSSAATQAKQAQ 221
                K        +SIQ + Q         K +K ++ Q+    +  K+       Q Q
Sbjct: 145 IPFQSKQALIDDQIRSIQANFQ-------KIKKEKEKERQRNADVLGHKARNYHHLHQNQ 204

Query: 222 GSTSQANS----GAKPGGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRV 281
              S   +    G+    GS GTGVFLPR              +  KK GCSTV+IP RV
Sbjct: 205 RPRSGVKAVFVDGSGSRTGSGGTGVFLPRGHG--------TVVESRKKSGCSTVIIPARV 247

Query: 282 LQALQLHYDRM 283
           ++AL++H+D++
Sbjct: 265 VEALKVHFDKL 247

[Close]

BLAST of CmoCh13G000950 vs. NCBI nr
Match: gi|659115183|ref|XP_008457429.1| (PREDICTED: uncharacterized protein LOC103497120 isoform X1 [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 2.7e-121
Identity = 251/310 (80.97%), Postives = 264/310 (85.16%), Query Frame = 1


Query: 1   MAADPEGREFKFYSQFQAEHGNKQ-NPFEGDNWSSYYGRSDSFLSFSSKVESEI-----E 60
           MAAD EGRE KF S+FQ EHG+KQ NPFEGD+WSSY+GRSDSFLSF+S VESEI     E
Sbjct: 1   MAADQEGRELKFNSKFQIEHGDKQQNPFEGDSWSSYFGRSDSFLSFNSPVESEIGSNEIE 60

Query: 61  SDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPWGLSSSPISTLW 120
           SD+DDG + G   DDYTAELSRRMAQYMLQDDDNSS  SFQ EIQ+K WGLS SPISTLW
Sbjct: 61  SDRDDGENDG---DDYTAELSRRMAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLW 120

Query: 121 SPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSKLEKMKKFSTNDKSIQT 180
           SPLGSS GSS+GSPEGPSKEPSPPSTPVV ERGGLDISHNVFSKLEKMKK S + KSIQT
Sbjct: 121 SPLGSSTGSSHGSPEGPSKEPSPPSTPVVEERGGLDISHNVFSKLEKMKKVSIHGKSIQT 180

Query: 181 SPQHGGTRSSSS-------KNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKP 240
           S Q G T SSSS       KNQKRRQNQQQQQFMKQK S A Q KQAQGS+ QANSGAK 
Sbjct: 181 STQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQAQGSSLQANSGAK- 240

Query: 241 GGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQLHYDRMDNETR 298
            GG SGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQ HYDRMD+ETR
Sbjct: 241 SGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQHHYDRMDDETR 300

[Close]

BLAST of CmoCh13G000950 vs. NCBI nr
Match: gi|449455072|ref|XP_004145277.1| (PREDICTED: uncharacterized protein LOC101214739 isoform X1 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 6.8e-117
Identity = 245/310 (79.03%), Postives = 259/310 (83.55%), Query Frame = 1


Query: 1   MAADPEGREFKFYSQFQAEHGN-KQNPFEGDNWSSYYGRSDSFLSFSSKVESEI-----E 60
           MAAD EGRE KF S+FQ EHG+ +QNPFEGD+W SY+GRSDSFLSF+S VESEI     E
Sbjct: 1   MAADQEGRELKFNSKFQIEHGDMQQNPFEGDSWPSYFGRSDSFLSFNSPVESEIGSYEIE 60

Query: 61  SDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPWGLSSSPISTLW 120
           SD+DDG + G   DDYTAELSRRMAQYMLQDDDNSS  SFQ EIQ+K WGLS SPISTLW
Sbjct: 61  SDRDDGENDG---DDYTAELSRRMAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLW 120

Query: 121 SPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSKLEKMKKFSTNDKSIQT 180
           SPLGSS GSS+GSPEGPSKEPSPPSTPVV E G LDISHNVFSKLEKMKK S N KSIQT
Sbjct: 121 SPLGSSTGSSHGSPEGPSKEPSPPSTPVVEECGELDISHNVFSKLEKMKKVSINGKSIQT 180

Query: 181 SPQHGGTRSSSS-------KNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKP 240
           S Q G T SSSS       KNQKRRQNQQQQQFMKQK S   Q KQAQGS+ QANSGAK 
Sbjct: 181 STQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQAQGSSLQANSGAK- 240

Query: 241 GGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQLHYDRMDNETR 298
             G SGTGVFLPRHVNY+RPAPCPQPPQPPKKKGCSTVLIPVRVLQALQ HYDRMD+ETR
Sbjct: 241 SVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKKGCSTVLIPVRVLQALQHHYDRMDDETR 300

[Close]

BLAST of CmoCh13G000950 vs. NCBI nr
Match: gi|700210665|gb|KGN65761.1| (hypothetical protein Csa_1G525320 [Cucumis sativus])

HSP 1 Score: 402.9 bits (1034), Expect = 5.2e-109
Identity = 229/287 (79.79%), Postives = 241/287 (83.97%), Query Frame = 1


Query: 23  KQNPFEGDNWSSYYGRSDSFLSFSSKVESEI-----ESDKDDGGSGGGDDDDYTAELSRR 82
           +QNPFEGD+W SY+GRSDSFLSF+S VESEI     ESD+DDG + G   DDYTAELSRR
Sbjct: 2   QQNPFEGDSWPSYFGRSDSFLSFNSPVESEIGSYEIESDRDDGENDG---DDYTAELSRR 61

Query: 83  MAQYMLQDDDNSSIESFQPEIQHKPWGLSSSPISTLWSPLGSSAGSSYGSPEGPSKEPSP 142
           MAQYMLQDDDNSS  SFQ EIQ+K WGLS SPISTLWSPLGSS GSS+GSPEGPSKEPSP
Sbjct: 62  MAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLWSPLGSSTGSSHGSPEGPSKEPSP 121

Query: 143 PSTPVVVERGGLDISHNVFSKLEKMKKFSTNDKSIQTSPQHGGTRSSSS-------KNQK 202
           PSTPVV E G LDISHNVFSKLEKMKK S N KSIQTS Q G T SSSS       KNQK
Sbjct: 122 PSTPVVEECGELDISHNVFSKLEKMKKVSINGKSIQTSTQIGETGSSSSKDQSRTPKNQK 181

Query: 203 RRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKPGGGSSGTGVFLPRHVNYNRPAPC 262
           RRQNQQQQQFMKQK S   Q KQAQGS+ QANSGAK   G SGTGVFLPRHVNY+RPAPC
Sbjct: 182 RRQNQQQQQFMKQKGSGTIQVKQAQGSSLQANSGAK-SVGPSGTGVFLPRHVNYSRPAPC 241

Query: 263 PQPPQPPKKKGCSTVLIPVRVLQALQLHYDRMDNETREKITGFTALR 298
           PQPPQPPKKKGCSTVLIPVRVLQALQ HYDRMD+ETR+KITGFTALR
Sbjct: 242 PQPPQPPKKKGCSTVLIPVRVLQALQHHYDRMDDETRQKITGFTALR 284

[Close]

BLAST of CmoCh13G000950 vs. NCBI nr
Match: gi|659115185|ref|XP_008457430.1| (PREDICTED: uncharacterized protein LOC103497120 isoform X2 [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 217/273 (79.49%), Postives = 228/273 (83.52%), Query Frame = 1


Query: 1   MAADPEGREFKFYSQFQAEHGNKQ-NPFEGDNWSSYYGRSDSFLSFSSKVESEI-----E 60
           MAAD EGRE KF S+FQ EHG+KQ NPFEGD+WSSY+GRSDSFLSF+S VESEI     E
Sbjct: 1   MAADQEGRELKFNSKFQIEHGDKQQNPFEGDSWSSYFGRSDSFLSFNSPVESEIGSNEIE 60

Query: 61  SDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPWGLSSSPISTLW 120
           SD+DDG + G   DDYTAELSRRMAQYMLQDDDNSS  SFQ EIQ+K WGLS SPISTLW
Sbjct: 61  SDRDDGENDG---DDYTAELSRRMAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLW 120

Query: 121 SPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSKLEKMKKFSTNDKSIQT 180
           SPLGSS GSS+GSPEGPSKEPSPPSTPVV ERGGLDISHNVFSKLEKMKK S + KSIQT
Sbjct: 121 SPLGSSTGSSHGSPEGPSKEPSPPSTPVVEERGGLDISHNVFSKLEKMKKVSIHGKSIQT 180

Query: 181 SPQHGGTRSSSS-------KNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKP 240
           S Q G T SSSS       KNQKRRQNQQQQQFMKQK S A Q KQAQGS+ QANSGAK 
Sbjct: 181 STQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGAIQVKQAQGSSLQANSGAK- 240

Query: 241 GGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKK 261
            GG SGTGVFLPRHVNYNRPAPCPQPPQPPKKK
Sbjct: 241 SGGPSGTGVFLPRHVNYNRPAPCPQPPQPPKKK 269

[Close]

BLAST of CmoCh13G000950 vs. NCBI nr
Match: gi|778661574|ref|XP_011658349.1| (PREDICTED: uncharacterized protein LOC101214739 isoform X2 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 3.9e-96
Identity = 211/273 (77.29%), Postives = 223/273 (81.68%), Query Frame = 1


Query: 1   MAADPEGREFKFYSQFQAEHGN-KQNPFEGDNWSSYYGRSDSFLSFSSKVESEI-----E 60
           MAAD EGRE KF S+FQ EHG+ +QNPFEGD+W SY+GRSDSFLSF+S VESEI     E
Sbjct: 1   MAADQEGRELKFNSKFQIEHGDMQQNPFEGDSWPSYFGRSDSFLSFNSPVESEIGSYEIE 60

Query: 61  SDKDDGGSGGGDDDDYTAELSRRMAQYMLQDDDNSSIESFQPEIQHKPWGLSSSPISTLW 120
           SD+DDG + G   DDYTAELSRRMAQYMLQDDDNSS  SFQ EIQ+K WGLS SPISTLW
Sbjct: 61  SDRDDGENDG---DDYTAELSRRMAQYMLQDDDNSSTTSFQSEIQNKSWGLSGSPISTLW 120

Query: 121 SPLGSSAGSSYGSPEGPSKEPSPPSTPVVVERGGLDISHNVFSKLEKMKKFSTNDKSIQT 180
           SPLGSS GSS+GSPEGPSKEPSPPSTPVV E G LDISHNVFSKLEKMKK S N KSIQT
Sbjct: 121 SPLGSSTGSSHGSPEGPSKEPSPPSTPVVEECGELDISHNVFSKLEKMKKVSINGKSIQT 180

Query: 181 SPQHGGTRSSSS-------KNQKRRQNQQQQQFMKQKSSAATQAKQAQGSTSQANSGAKP 240
           S Q G T SSSS       KNQKRRQNQQQQQFMKQK S   Q KQAQGS+ QANSGAK 
Sbjct: 181 STQIGETGSSSSKDQSRTPKNQKRRQNQQQQQFMKQKGSGTIQVKQAQGSSLQANSGAK- 240

Query: 241 GGGSSGTGVFLPRHVNYNRPAPCPQPPQPPKKK 261
             G SGTGVFLPRHVNY+RPAPCPQPPQPPKKK
Sbjct: 241 SVGPSGTGVFLPRHVNYSRPAPCPQPPQPPKKK 269

The following BLAST results are available for this feature:

BLAST of CmoCh13G000950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G000950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0L9_CUCSA	3.6e-109	79.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G525320 PE=4 SV=1	[more]
R0GRF7_9BRAS	3.1e-15	34.02	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026875mg PE=4 SV=1	[more]
A0A078DJA6_BRANA	5.2e-15	33.61	BnaA03g09600D protein OS=Brassica napus GN=BnaA03g09600D PE=4 SV=1	[more]
A0A078C2V9_BRANA	7.5e-14	34.48	BnaC03g12110D protein OS=Brassica napus GN=BnaC03g12110D PE=4 SV=1	[more]
M4CR85_BRARP	7.5e-14	34.48	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of CmoCh13G000950 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59050.1	6.7e-14	32.27	unknown protein	[more]

BLAST of CmoCh13G000950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115183\|ref\|XP_008457429.1\|	2.7e-121	80.97	PREDICTED: uncharacterized protein LOC103497120 isoform X1 [Cucumis melo]	[more]
gi\|449455072\|ref\|XP_004145277.1\|	6.8e-117	79.03	PREDICTED: uncharacterized protein LOC101214739 isoform X1 [Cucumis sativus]	[more]
gi\|700210665\|gb\|KGN65761.1\|	5.2e-109	79.79	hypothetical protein Csa_1G525320 [Cucumis sativus]	[more]
gi\|659115185\|ref\|XP_008457430.1\|	1.5e-100	79.49	PREDICTED: uncharacterized protein LOC103497120 isoform X2 [Cucumis melo]	[more]
gi\|778661574\|ref\|XP_011658349.1\|	3.9e-96	77.29	PREDICTED: uncharacterized protein LOC101214739 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000950.1	CmoCh13G000950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33356	FAMILY NOT NAMED	coord: 26..282 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G000950	Cucsa.146620	Cucumber (Gy14) v1	cgycmoB0402
CmoCh13G000950	CmaCh13G000980	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G000950	CmaCh01G006300	Cucurbita maxima (Rimu)	cmacmoB458
CmoCh13G000950	Cla008205	Watermelon (97103) v1	cmowmB173
CmoCh13G000950	Csa1G525320	Cucumber (Chinese Long) v2	cmocuB204
CmoCh13G000950	MELO3C020595	Melon (DHL92) v3.5.1	cmomeB181
CmoCh13G000950	ClCG03G001150	Watermelon (Charleston Gray)	cmowcgB184
CmoCh13G000950	CSPI01G23450	Wild cucumber (PI 183967)	cmocpiB206
CmoCh13G000950	Lsi02G013260	Bottle gourd (USVL1VR-Ls)	cmolsiB191
CmoCh13G000950	Cp4.1LG20g08300	Cucurbita pepo (Zucchini)	cmocpeB202
CmoCh13G000950	Cp4.1LG02g13600	Cucurbita pepo (Zucchini)	cmocpeB205
CmoCh13G000950	Cp4.1LG02g11540	Cucurbita pepo (Zucchini)	cmocpeB207
CmoCh13G000950	MELO3C020595.2	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G000950	CsaV3_1G034640	Cucumber (Chinese Long) v3	cmocucB0244
CmoCh13G000950	CsaV3_1G035740	Cucumber (Chinese Long) v3	cmocucB0236
CmoCh13G000950	Cla97C03G052010	Watermelon (97103) v2	cmowmbB209
CmoCh13G000950	CsGy1G022920	Cucumber (Gy14) v2	cgybcmoB069
CmoCh13G000950	Carg12397	Silver-seed gourd	carcmoB0594
CmoCh13G000950	Carg20629	Silver-seed gourd	carcmoB0517

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G000950	CmoCh01G006600	Cucurbita moschata (Rifu)	cmocmoB173

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G000950	Watermelon (97103) v2	cmowmbB204
CmoCh13G000950	Wax gourd	cmowgoB0238
CmoCh13G000950	Wax gourd	cmowgoB0245
CmoCh13G000950	Cucurbita moschata (Rifu)	cmocmoB180
CmoCh13G000950	Cucurbita moschata (Rifu)	cmocmoB189
CmoCh13G000950	Cucumber (Gy14) v1	cgycmoB0384
CmoCh13G000950	Cucurbita maxima (Rimu)	cmacmoB577
CmoCh13G000950	Wild cucumber (PI 183967)	cmocpiB214
CmoCh13G000950	Wild cucumber (PI 183967)	cmocpiB217
CmoCh13G000950	Cucumber (Chinese Long) v2	cmocuB214
CmoCh13G000950	Melon (DHL92) v3.5.1	cmomeB178
CmoCh13G000950	Watermelon (Charleston Gray)	cmowcgB180
CmoCh13G000950	Watermelon (97103) v1	cmowmB197
CmoCh13G000950	Bottle gourd (USVL1VR-Ls)	cmolsiB186
CmoCh13G000950	Melon (DHL92) v3.6.1	cmomedB198
CmoCh13G000950	Silver-seed gourd	carcmoB0212
CmoCh13G000950	Cucumber (Chinese Long) v3	cmocucB0253