CmoCh12G012950 (gene) Cucurbita moschata (Rifu)

NameCmoCh12G012950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr12 : 11397755 .. 11403252 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTGCAGGCACCTGTCTTGTTATTTATTTCCTTGTATCATAAGGTAAGTTGATAATGTTCGAGTATTTTCATGATGTATGTATTATAATTCTCATCGGTAAATTGTCGTATTAAGTTAATTTTCATGATTTTTACCGCCTTTTTACCATTGGTTTCGATCGTGAATTCGAGAAAAATAAGATCGAAGTTCTGTTTTTTTCTTTTTATAATCAAAATCTGAATTTATAAAATAATAAAAAAAATATAATTATTAAAATCTGTTTTTTTTTTTTATAATCAAAATCTGAATTTATAAAATAAAAAAATATATAATTATTAACAAAATAAAAATATGAAAAATGTTTGGATGGAAATAAATGTTCAGTTTCCTTTTTATTATCATTATTATTTTATTTTAATTATTATTTTTTGAGCAAACGATACCATTTTCCTTTTCTTTTATTCCTTTTTAAAGATTAAATTATAAATTTAGTTTATTTAATTTTTAATGTTAAAATTAATTTGATTTTAGTAAATAGTAAAGGCTATGAAATAAAATTCTAAATTTTTCGTACTTGAATTTATTTATTTATTTTTATTATAGGAACGAATTTGAAATCCGTGATATATATATATAACTAAATCGCAATATGTCATCGGATAATGGCTCACTGAGTTTCAGCAGCGCGGGTAGAGTGACGGAGATAACAACTTCGAGAAAGAGAGCGAGAGAGTGAAGAATGGTGAGGATAACTCCAATGGCGTCCTTCTTTATCGGCGTATAGGTTCGCCGGATTTCATCGCACCGGCCTCTCTCTCTCCTTCTTCAACACTACGCCCAAAATATTTTGATTGCACCTTGCAGTGGTATGAAATTCTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTATGTTTACGGTTCTCATCTCCGCTTGTTTACGAACAATACTTCGTTGATTAGCACTGTTCTTTTTGTTAATTTTCCATCTCGATTGAGATTTCCGATATACTTTTTCTGTTCCTTTTTTGGTGGATATGCTTGCTTGGAGTGTATTTTTGTTCTGCTTTTGTCGATGCCGATTCAGTTGACATCGTAGATTGTTTCATTAGTTCTTTTTCTTAGGTAGAATGTGTATCGCGTGGCTCGATGGCTTAAGAAGTAAATGATTCTTGTTGTGAAATGAATTTGGATGACGGTTTGTGATTGTAACGATTTTAATCTCATTTTTGAGGTTTCATCAGTGGATTTGCTGATTCGTTTTGGAAATCGAGGCGAAAATGTTCAATGTGATCAATATTTTAAAATTTTAATTTCTGTTTTTCCAAATACCTTTAAAGTCTTGATGTGAACTTCTCTCCATTAATCTTTGTTTTTCTGTTCATGAATATTCTTTATATCTGTCGAGAGGCGCTACATCATAAGAATCATGCTAATCACATATATTATACCAAAACTTCCTAACAATTTTACTCACGTCTTCTTTTCATGTGTGAAGTTCCTGAGTTGTGTTGGAGTGAGCTGATGTGACGGCTAAATGCCTCGAAAAGTCCAGACGAATAATCTATTCCATATTATTTATACTATTCAAGTGGCGCCTTGATATTTGAATATGAATATATCTTTACTTATCCAGCATTTATCTTCTTACGGATGTTATCTCCGTTACAACCAGTGCTTTGCAATGAGCAATGATAATGGCGTATAATGTATCTGTATGTCATACTTCAGCAACTTTTCTTCCCTTTTTGTGCTCTGTGTGAATTATTGTGCCTTCTTTCCTCAAGGTGCTTTTGCCTTGAACTTCTGCAGGAAGTTCAGTCCTCAACACCAAATATGGATTACTACGCTCTAGTGAACGGAAAAAAATAATTTATTAATGATAAGTGATATTAAGAAACTCAATATCTTAAGTTGCTTTACAGCTGCTCCACAGTCGCAATACTTTGGTCTGAAAGCTTCTGAGCTGGTGAGGGCAGAAGGCTGCGACATCGGGATGACTGGAGCTGGTAATGCAGTCCAAGCAAGCACTAGTGCGGGACAAGAGAAGATTGCTTCATGTTGTCTATCATGATGGAGATTTAGACAAGAGGACAAAGTATGCTTGTTTGAGATATTATGGATATATTTTTTCAATTTCTAGTTTGACTAAGATGAGATCAGGAATGTTAAAAAACCAAGAAATTTAATTTCTGGTTGCTCAGATTCTATAGTGCTCTGGAATGAAGCTCCTGCGAAAACATGACATACCAGAGGAGAAATACAGGAATGGCTTTCTTTGGTTTGGTCGAGAGAGGATTCACACTTCGTGATTGAACTCACTTACAGTAAGAAACGAACTATGCGACTGCTATTCAGCTATTATGTAATTTCAGTTTGTTTAGATTTCGTGTGGACTATTCTGGAAAAACAGCATTCAACAGGAAATTTTCCTTCAAAGATTTGGTATGTCTAATCATTTTTGCTTTGATTGGTTATTGTTCCAGATCATGGAGTCGACTGGTATGATATTGTCACTTGGTTTGGTCATCTTGGCATTGCGGTTGAAGATGTAAGATCCTCTAGTTGAAATCTGCATTCCATTGGTTTTTGCACGTACAGAGGTATCCCGACTTATATGATTCTGCATGTGCAATATTTTATTACAAAAGGTTATATAATTTTTTAAATGAGCAAACTAAAACACAAAACTTATTATATTCTAAGGTTCTGATTGGTGTTTCAGAGTCATTAACGTAAAAGATATTTTCCAGATTTTAATGGACATGTGAGTTCTCTGATAGTATAACAAGTGTCATACCTTTTTATTAACAACGATTTTTGAGGTCCTTTTTTCCCATTGTGCTGATTACATTCTTCACTTGCAAACAATGAACTATAAATAATTTCAAGGCTTAAATCTTTAATTTTTTAGTAAATACTCTTAACCATATATTGGGCTGGATTATAATCTTGGCTTCTTTTTTTCTTTTTTTTTTCATTAAGAATAACTTGAATTGATTTTTATCTTATTTCCTTTCATTTTCCTTTTCATGTCTGTTTTTACTCTTTTGGTTACATATGTAGGTGTGTTCATTGCGTCACTATTTAGTCGAGAAGGATGTTGAGGTTTTTGTTATTTCTTATCAAAATGGTTTTTTTTTTTTTTCTCTTAATAGGTTTACAAGACCGTAGAACAACTAAAAGTCAAGGGTGGGAAAGTGACCTGGCCATGTGAAAGATGGTCGTACCGTTATTGCTTTTGTGGAAGATCCCGACGGTAGTTTCAACTTACAGAAACGCTTTGTGTTGGTGATCTCAATAGAGTTTTATAAGAAGGTAAGGCTGTGAAGTTTCTTCCAGTTGTAGTTGACAGTCATTGTTCGCTTCATTTTTTCTTCTCTTTAGCTTTCCTGAATATCAATGATATGCCTTAACTGGTTAAGTATGTTCCATTCCGTATCATACTTGGTTCATTGTTGGTTTCATGTGCATCCATTAACTTAATTATGTGATGTTTATGATTGCTTCTATTATACTATATCTATGCTGGGTTATGGCTTCACTGATTACGAAAAGGGGAATGCTTATGCTAAGGTACATTAATTTTCCAATTTTCTTCATATCACTTTGGTTCGGAAACATGAATAGTAATCTTTTAGAATTGTTCTTGAATTCTTAATTTCTTACTGTCGTGATTTCATGAAATCAATGATCGAGATGTTACTGATCTTATAAGTAAAGATTGCTATTGCAGAAACAGTGAAACTTAGTGCGGGAGAAGTCACCCGAAAACCTGGACCGTTTCCAGCTTGCTTGGATCCCGATGGCTGGAAGACGGTAAGCTTCTAAAAAAATTTCACTTTCTGTGCCTTGCCTTAGTTGATTTCTGTGTTTTATACAGTAGAATTTAGTAGAAGAAACAAATTTTTTTCATTATAAGTGAAAAGTTATGACGCAAAATAAATCCAACTGTTCGGATAAACCAAATAACTAACTATTCACAACTCCACTCCAAAACGGACCCTTCTCTTGAAGCCTATTCGCCGCTTCCAGATCTTCTTGGAGAAGCACCAACCTTAATAAAACATTCTTTTTAACCTTCCACAAAGCTTCACAGACCCTTTTAGACAAGGTTGAACACATCCGCCTTATTCTTTAGTCCTGGACTGAACAAAGAAGCATCCAAATTTTTAGGTCCCATCTTATATGATCATCCCAGCTAGACTAAGTCTCAATTCTTCCAGTAATTTCAGCAGATTTCAGAATTTAGGCATCACCTTTGAATCATTATGATTAGAAAGGTCGAAGATTTTTGGAAAAGTTGCATAATGATTGATTTTGGAAAATCGCTCATTGGAAAAAACCCTTTTATAAAGAACCTCGAAGTTTTAGAACTCATTTCTTCTTTTCTTCTGTGAACCACCACCTAGATCTTTTTTTTTTTTGGAGTTTTAGAAGGTGACTTTGATTTTTTGAAAATAGTTTAAAGGTAGATAATAAAATAAGAAAATTCATGATATTTATAGTCTCTTAATTTTCAAAAAATTAATTTATGTTGTCAAATGGGGTTCGGATTTGGTTTTGTAACTTTAAAATACAGTCATCCCCTTGTTGTTCGTGGCTCTCGTGTGGATATTATCACATTTTTATGTTGAATTAAATAGAGTTTAATGTACAAACAAAATCACTCATTTACTGTAGCTTCTTTTATCCCTTTGCCGCTGCACTGGGATGCCCTCCTAATTAGTTGAAACGCAGCGCCCAAAAGTTTTAATGTCTAATTGAACCCATCGAAGAGGTACTTTCATAAAATTCTATTAAATACTTTTTAAAATTTAGGATTTCTTAAATAGAAAATAGTAAGCTTAGACTATTAAACACGACCTTCAGTCAATCTGATCCTGTTGGGAATCACTCTTAAGCTCTTCCGGATAGTGTTTGGTATTTTCAGGTTCAAACAGTCCTCCGAAAAATTTGAGAGAAGTTTAGGTTTGAAAACCAATGCTAAACAACTTATAAATGTTTCTTATTTCTTAGGCTTAGTATGTTTTTCTCATCATTTCTTTACTATGGTTTTCATTTTAATCATTTTTCGGTTTGTGGTTTTAGCCAAATTTCTATAAACTTTTTAAAATTTAGCTTAGATTTTAGTACATTTGTATTTACGAAATTAATTTGTAAAATAAAAAAACAAAAAATTAAATGTTATCGAATTGAATTTCAACTTTTATCTTTAAACTTGAAAATCAGTTGAACCAATTTCGTTCTACAGGTTTAATCTTTATTGCTATTATTATTACTACTTTGTTCTTTTCAATTATAGGTTGCGCTCTTGGTTTTGGCATCCCTAGTGTAATATACTCTCGATTGGCGTAGAGATCCAATAAGATGTGACGGTTACTGAAGAAACTTTATAAAAAAACCACTCACGCTTGCAGATAGACTACTAGTTCGATTATGTGATGATCGACATTTATTACCTCTTTTTGGGTTTTAACCTTTTTTTACAAAAAATAAAAGGAAAGACCTTGCTG

mRNA sequence

ATGATTTTGCAGGCACCTGTCTTGTTATTTATTTCCTTGTATCATAAGGTTCGCCGGATTTCATCGCACCGGCCTCTCTCTCTCCTTCTTCAACACTACGCCCAAAATATTTTGATTGCACCTTGCAGTGCTGCTCCACAGTCGCAATACTTTGGTCTGAAAGCTTCTGAGCTGGTGAGGGCAGAAGGCTGCGACATCGGGATGACTGGAGCTGACAAGAGGACAAAATTCTATAGTGCTCTGGAATGAAGCTCCTGCGAAAACATGACATACCAGAGGAGAAATACAGGAATGGCTTTCTTTGGTTTGGTCGAGAGAGGATTCACACTTCGTGATTGAACTCACTTACAATCATGGAGTCGACTGGTATGATATTGTCACTTGGTTTGGTCATCTTGGCATTGCGGTTGAAGATGTAAGATCCTCTAGTTGAAATCTGCATTCCATTGGTTTTTGCACGTACAGAGGTTTACAAGACCGTAGAACAACTAAAAGTCAAGGGTGGGAAAGTGACCTGGCCATGTGAAAGATGGTCGTACCGTTATTGCTTTTGTGGAAGATCCCGACGGTAGTTTCAACTTACAGAAACGCTTTGTGTTGGTGATCTCAATAGAGTTTTATAAGAAGATTGCTATTGCAGAAACAGTGAAACTTAGTGCGGGAGAAGTCACCCGAAAACCTGGACCGTTTCCAGCTTGCTTGGATCCCGATGGCTGGAAGACGGTTGCGCTCTTGGTTTTGGCATCCCTAGTGTAATATACTCTCGATTGGCGTAGAGATCCAATAAGATGTGACGGTTACTGAAGAAACTTTATAAAAAAACCACTCACGCTTGCAGATAGACTACTAGTTCGATTATGTGATGATCGACATTTATTACCTCTTTTTGGGTTTTAACCTTTTTTTACAAAAAATAAAAGGAAAGACCTTGCTG

Coding sequence (CDS)

ATGATTTTGCAGGCACCTGTCTTGTTATTTATTTCCTTGTATCATAAGGTTCGCCGGATTTCATCGCACCGGCCTCTCTCTCTCCTTCTTCAACACTACGCCCAAAATATTTTGATTGCACCTTGCAGTGCTGCTCCACAGTCGCAATACTTTGGTCTGAAAGCTTCTGAGCTGGTGAGGGCAGAAGGCTGCGACATCGGGATGACTGGAGCTGACAAGAGGACAAAATTCTATAGTGCTCTGGAATGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G012950.1CmoCh12G012950.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G012950Carg18587Silver-seed gourdcarcmoB1207
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G012950Cucumber (Chinese Long) v2cmocuB157
CmoCh12G012950Melon (DHL92) v3.5.1cmomeB140
CmoCh12G012950Melon (DHL92) v3.5.1cmomeB161
CmoCh12G012950Watermelon (Charleston Gray)cmowcgB134
CmoCh12G012950Watermelon (97103) v1cmowmB159
CmoCh12G012950Watermelon (97103) v1cmowmB168
CmoCh12G012950Cucurbita pepo (Zucchini)cmocpeB147
CmoCh12G012950Cucurbita pepo (Zucchini)cmocpeB160
CmoCh12G012950Cucurbita pepo (Zucchini)cmocpeB170
CmoCh12G012950Cucurbita pepo (Zucchini)cmocpeB176
CmoCh12G012950Bottle gourd (USVL1VR-Ls)cmolsiB148
CmoCh12G012950Bottle gourd (USVL1VR-Ls)cmolsiB172
CmoCh12G012950Bottle gourd (USVL1VR-Ls)cmolsiB174
CmoCh12G012950Cucumber (Gy14) v2cgybcmoB170
CmoCh12G012950Melon (DHL92) v3.6.1cmomedB156
CmoCh12G012950Melon (DHL92) v3.6.1cmomedB177
CmoCh12G012950Silver-seed gourdcarcmoB0051
CmoCh12G012950Silver-seed gourdcarcmoB0176
CmoCh12G012950Silver-seed gourdcarcmoB0279
CmoCh12G012950Silver-seed gourdcarcmoB0776
CmoCh12G012950Cucumber (Chinese Long) v3cmocucB0185
CmoCh12G012950Watermelon (97103) v2cmowmbB156
CmoCh12G012950Watermelon (97103) v2cmowmbB171
CmoCh12G012950Watermelon (97103) v2cmowmbB176
CmoCh12G012950Wax gourdcmowgoB0183
CmoCh12G012950Wax gourdcmowgoB0226
CmoCh12G012950Cucurbita moschata (Rifu)cmocmoB050
CmoCh12G012950Cucurbita moschata (Rifu)cmocmoB080
CmoCh12G012950Cucurbita moschata (Rifu)cmocmoB143
CmoCh12G012950Cucurbita moschata (Rifu)cmocmoB148
CmoCh12G012950Cucumber (Gy14) v1cgycmoB0281
CmoCh12G012950Cucurbita maxima (Rimu)cmacmoB080
CmoCh12G012950Cucurbita maxima (Rimu)cmacmoB121
CmoCh12G012950Cucurbita maxima (Rimu)cmacmoB177
CmoCh12G012950Cucurbita maxima (Rimu)cmacmoB763
CmoCh12G012950Wild cucumber (PI 183967)cmocpiB159