CmoCh12G012300 (gene) Cucurbita moschata (Rifu)

NameCmoCh12G012300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMethyl-CpG-binding domain-containing protein 10
LocationCmo_Chr12 : 10968524 .. 10970710 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTCATTACTAAATTTGTCGCTGTAAATCCATTTCTCTCCTCTGTTTTAGTTGTGTGCAGCTAAGGAAGAAACCCAGAAACGCCAAATCGCGAATCCAAGTAACCCATTATTTTCTCTACCTTTTTCGAGAAGTTCTTTGTTCGGGAGCTATTTTTAGTGAATTTTATCATCATTGCTTCTTGTGGTTAGGTCATAAATGGCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGGTGTTCATCTCACTTCGATTCCTTTTCTGGATCTTCAGTTCTTGTTGAATTGCTTATTTTCTTGCTCAATTTTGCTTTTACCGCTCAATTCTCAACTCGGATTTTGTTGTTCCTGGATTTTAGGGTTTCTTTGGTGAGAATTCACTGCTTGTAGTATCTAGGGTTTTTTCTGGAAGGTTGAATTATCGAATTTCTTGCTTAATCTATCTTTTCGCTTGGATTTCCAGTCTTCTTCGACAGAAATCTCTGGAAATTGTTGGTCTCTAGTTTCTATTTGACTTTGCTTTGACATCGCTTTGACGTCGCTATGCTGCTTCGTGATGAGTTCAATTTGTGTTATGATGATTTTTTTTTTTGCTTGAATTACTTGGAGCTGTGGACTAATTTTTGTTCCCTTCTCCTTTCTGGTGTGAGAGATAGTGAGCGATTATGTTATCTGGGGAGGATTAGGGCTGCTAACATTGATAATGATGTTAATAAATAAAAATTATTGAACAGTGCGTGCTCTGCCTGGATTTGCCTTGCTCCAACAAGTGAGGATATACATGTGTGTGTGCATATTTTCTATTCAATCAGTTGACTATATTGTGCACTCAATACCAGCTGCTGAAATTTATTTGCTTGGATTTTTCACAATTTAAATGTGAGATCTCACATTGGTCTTTATAAGAGTGGGGAAACCACTCCTTAGTAGACGCGTTTTAAAATCGTGAGGCTGATAATATCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGATATCAGAACCAGACACCGGGCGATGTGCTAGCTAGGAGAGTAAGTTTCGAAGGGGGTGGACACCAGGCGGTGTGCCGCCAAGGACGCTGGGGATCTCACATCGATTGGAGAACGGAACGAGTGTCAGTGAGGACGTTGGGCCCCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAATATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGAGGAAGCCTAAAAGGGAAAGCCCAAAGAGGACAATATCTACTTGCTGTGGGCTTGGGCCGTTGTAGGAACGTCTAAGGATAACGTTTAGATATTGGATATCTATAGTTGTTTTTATATATAAGTTGTGGTTGTGCTATGATCAAACTTGATTCTTGGCTTATAGAGCTTGTCTTTTTTTTTTTTTTTTTTGGGTAAGCTGTAGATGTTTGGCTCTATTATGGAAGGAGGGACATAAAAGGGGCTTATGGATTCAAGACGAAATAGAGGGGAAAATGAGATTTTAGGCATATTTTTGTCTTGAGGAACTGAAACTACTTGGGATTTTATCATTAGATATGGTAAATTTATCGGTGAGGTCTGGAATGGTTGACACGTTGGTTGATTTGATAGGCGTCTAATATACTTCCTTTATTGTAGGAAGGTCCTTAATGAGTTTTGTTAGTTGTACGTATGAATCAATCTGTAACTTCTGTTCTATTCTAGTATGTGTTTAAGACCTGATCCTGTTGCTTTCATGTTGCTTTCAAGTAGTTCAAAACATATATTTGTAGAAGGCGTCGGATTGGTTGTAGAGGGGAACAAAACATTCCTTATAATGGTGTGGAAACGTCTCCCTAGCAGATGTGTTTTAAAATCGTGAGGCTGATGACGATACATAAAGGGTCAAAGTGGACAATATCTCCTAGCGGTGGGTTTGGGCTGTTACAGTGATCATATGAAATTTCCTGTCATTTTGAGTAATATCTAAATCAAAATATATTATCGTTATCAAATAAGTTCGATTGTCCAGCAAAACTCGATACTTATGGAAAGAAGAGGAAGACATAAGCAAGGTGACCGGAGTGAAGTTCAACAGTTGGATGTGGGAGCCCGTCATAGTTGGTCAATGGGATAA

mRNA sequence

CCGTCATTACTAAATTTGTCGCTGTAAATCCATTTCTCTCCTCTGTTTTAGTTGTGTGCAGCTAAGGAAGAAACCCAGAAACGCCAAATCGCGAATCCAAGTCATAAATGGCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGCAAAACTCGATACTTATGGAAAGAAGAGGAAGACATAAGCAAGGTGACCGGAGTGAAGTTCAACAGTTGGATGTGGGAGCCCGTCATAGTTGGTCAATGGGATAA

Coding sequence (CDS)

ATGGCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGCAAAACTCGATACTTATGGAAAGAAGAGGAAGACATAAGCAAGGTGACCGGAGTGAAGTTCAACAGTTGGATGTGGGAGCCCGTCATAGTTGGTCAATGGGATAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G012300.1CmoCh12G012300.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G012300Carg17496Silver-seed gourdcarcmoB0356
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G012300Cucurbita moschata (Rifu)cmocmoB050
CmoCh12G012300Cucurbita moschata (Rifu)cmocmoB080
CmoCh12G012300Cucurbita moschata (Rifu)cmocmoB143
CmoCh12G012300Cucurbita moschata (Rifu)cmocmoB148
CmoCh12G012300Cucumber (Gy14) v1cgycmoB0359
CmoCh12G012300Cucumber (Gy14) v1cgycmoB0856
CmoCh12G012300Cucurbita maxima (Rimu)cmacmoB080
CmoCh12G012300Cucurbita maxima (Rimu)cmacmoB121
CmoCh12G012300Cucurbita maxima (Rimu)cmacmoB177
CmoCh12G012300Cucurbita maxima (Rimu)cmacmoB763
CmoCh12G012300Wild cucumber (PI 183967)cmocpiB191
CmoCh12G012300Wild cucumber (PI 183967)cmocpiB159
CmoCh12G012300Wild cucumber (PI 183967)cmocpiB169
CmoCh12G012300Cucumber (Chinese Long) v2cmocuB165
CmoCh12G012300Cucumber (Chinese Long) v2cmocuB157
CmoCh12G012300Cucumber (Chinese Long) v2cmocuB185
CmoCh12G012300Melon (DHL92) v3.5.1cmomeB140
CmoCh12G012300Melon (DHL92) v3.5.1cmomeB160
CmoCh12G012300Melon (DHL92) v3.5.1cmomeB161
CmoCh12G012300Watermelon (Charleston Gray)cmowcgB134
CmoCh12G012300Watermelon (Charleston Gray)cmowcgB152
CmoCh12G012300Watermelon (Charleston Gray)cmowcgB158
CmoCh12G012300Watermelon (97103) v1cmowmB147
CmoCh12G012300Watermelon (97103) v1cmowmB159
CmoCh12G012300Watermelon (97103) v1cmowmB170
CmoCh12G012300Cucurbita pepo (Zucchini)cmocpeB147
CmoCh12G012300Cucurbita pepo (Zucchini)cmocpeB160
CmoCh12G012300Cucurbita pepo (Zucchini)cmocpeB170
CmoCh12G012300Cucurbita pepo (Zucchini)cmocpeB178
CmoCh12G012300Bottle gourd (USVL1VR-Ls)cmolsiB148
CmoCh12G012300Bottle gourd (USVL1VR-Ls)cmolsiB157
CmoCh12G012300Bottle gourd (USVL1VR-Ls)cmolsiB161
CmoCh12G012300Bottle gourd (USVL1VR-Ls)cmolsiB172
CmoCh12G012300Bottle gourd (USVL1VR-Ls)cmolsiB174
CmoCh12G012300Cucumber (Gy14) v2cgybcmoB055
CmoCh12G012300Cucumber (Gy14) v2cgybcmoB170
CmoCh12G012300Cucumber (Gy14) v2cgybcmoB177
CmoCh12G012300Cucumber (Gy14) v2cgybcmoB275
CmoCh12G012300Cucumber (Gy14) v2cgybcmoB887
CmoCh12G012300Melon (DHL92) v3.6.1cmomedB152
CmoCh12G012300Melon (DHL92) v3.6.1cmomedB154
CmoCh12G012300Melon (DHL92) v3.6.1cmomedB166
CmoCh12G012300Melon (DHL92) v3.6.1cmomedB176
CmoCh12G012300Melon (DHL92) v3.6.1cmomedB177
CmoCh12G012300Silver-seed gourdcarcmoB0051
CmoCh12G012300Silver-seed gourdcarcmoB0176
CmoCh12G012300Silver-seed gourdcarcmoB0776
CmoCh12G012300Silver-seed gourdcarcmoB1311
CmoCh12G012300Cucumber (Chinese Long) v3cmocucB0174
CmoCh12G012300Cucumber (Chinese Long) v3cmocucB0185
CmoCh12G012300Cucumber (Chinese Long) v3cmocucB0191
CmoCh12G012300Cucumber (Chinese Long) v3cmocucB0196
CmoCh12G012300Cucumber (Chinese Long) v3cmocucB0203
CmoCh12G012300Cucumber (Chinese Long) v3cmocucB0218
CmoCh12G012300Watermelon (97103) v2cmowmbB156
CmoCh12G012300Watermelon (97103) v2cmowmbB168
CmoCh12G012300Watermelon (97103) v2cmowmbB174
CmoCh12G012300Watermelon (97103) v2cmowmbB176
CmoCh12G012300Watermelon (97103) v2cmowmbB186
CmoCh12G012300Watermelon (97103) v2cmowmbB190
CmoCh12G012300Wax gourdcmowgoB0171
CmoCh12G012300Wax gourdcmowgoB0202
CmoCh12G012300Wax gourdcmowgoB0220
CmoCh12G012300Wax gourdcmowgoB0221
CmoCh12G012300Wax gourdcmowgoB0226