CmoCh12G012020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G012020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NEDD8 ultimate buster 1
Location	Cmo_Chr12 : 10797387 .. 10799287 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGCCATAAGAGTGCGGTTTGAGCGATGAGAAATGGGCCCTCAAGCCACAAACATGCATCAACGAACTTGGGGGCGAAGAATTTAAGTCCAATTCGATGAAATTTCCAAAACTTGATGCACAAGGAAAAGCCTCCTCGTACCCTTTTTAGCTTCCTTCTCGCAAATCCCAATCAAACCCACCTCGATCGCTTCAATCATTAACTTTCTCACTACCCCTTTTGGCATCCATCCTGTTTTTGATCGATTTTCATGGCGAAATTGAAGATTTCAGGGCCGTGGAGTGGTGTTTTGGACGTGGAACTGGATAATTGGACTGTGATCATGTTGAGGGAGGAAATAGCAAGGCGATCGAACTGTGGGGTTGAGTCGATCAATTTGATTTGCGGTGGTAGAATCTTGAAAGATGGCGATGGAGGCGAGAAACTACTCGATTTGGGTGTTAAGAACAACTCACGGATTCTTGCTAGGCGGGTTTCTACTGAAGAGGGCAAGTCACTCAACGTTGAGTTGATGGCTGAGGAAGAACGCTCTAACAGGCTTGCTCGAGTCAAGTGATTCTTCGACTCTTTTTTGTTTCTCTGATTATGTTCATATCTACTTTTGACTAAGCATGTGCAGTGCCATCGTTGGTTGCTTAATTCGACTGAAATTTGAGTTTCTTCTGGAATCAACTCATTGTGTGGTCTTAAGTTCCAAAATGGTTGCTAGATTTTGAGATGTTTGGTCTTATAAATGGTTGCTTTCATGATGAAATTGACTGTTTTCTGAGAGCTTTTTGCGTTAATGGGCTTGCTTTTCTGAGTTTTAGTATTGCAAGGTGGGGTTTAAACCAATCTTTGGGATGGTAATAGATATCATGTTCATCTTTTAAAATTTTTCTTCAGCTTTTGGATATCTGCTTCAGTTGTTCTATGAGTATTATGAGGCATTTTTAACAGTTGATTTTGGAAGCAAAGCATCTAGTTCAGGAATCAAAAGTCATCGGTTGGGGAGGAGAACGAAGCATTCCTTATAAAGGTGTAGAAACCTCTCCCTAGTAGATGCATTTTAAAAACCTCGAGGGGAAGCCCGAAAAGGAAAATGCAAAGAGGACAATATCTGTTAGCATTGGGCGGGCCTAGACTGTTACAAATGGTATCAGAGCTAGACATTGGACGGTATGCCAGTGAGGACGTTGTTCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAAAGGGAACGAAACATTCTTTATATGAGTGTGGAAACCTCTCTCGACCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGTTGCCCAAAGAGGACAATATCTGCTAGTAGTGGGCTTGGGCCGTTATAAAAGCAATTTTTATTGAGTGACAATGAACTTTTGGAGGGTATTCTTCCCCACAAGTCGATCATGAGTCACTGTGAAGAGTTTTAAGGATATCTTCTTATCTCATTTTCTGGCATCTTCTCTAAATTTACAGGGCAGCTGCCACTGCTTTAGCCAAGAGACATGCTAATGGTTTCCTCCCAGTTGAAGATTTCAATATAGAACTTGAGGATCAAAGTGGACAGAAAGTTAATTTGGGGTCTGAAACTGATCAAAGGTAAGAGATAGATTGCTTTCACGATGCGAATCCTCATCTCAAATGTTAGGATTTATAGTTATTCAGTGATTGAATTTTGTCCATTCAATAGGGCAATCATGATGGGCTTGATGCTTCATGCAAACGCAAAGCAGCTTATAAGAAAGGGAAATTACAAAGAAGCATTAGAAGTACTCATCATGGGAGAGGTATGTTACTGGTTGATCATTTTAATTGTCTTCAATATTATCTACGAAATATTAGCTGTTTTCCCCTTTGTTTTAAGAATTAGCTACAAGATCCAAATGATTTAA

mRNA sequence

AGGCCATAAGAGTGCGGTTTGAGCGATGAGAAATGGGCCCTCAAGCCACAAACATGCATCAACGAACTTGGGGGCGAAGAATTTAAGTCCAATTCGATGAAATTTCCAAAACTTGATGCACAAGGAAAAGCCTCCTCGTACCCTTTTTAGCTTCCTTCTCGCAAATCCCAATCAAACCCACCTCGATCGCTTCAATCATTAACTTTCTCACTACCCCTTTTGGCATCCATCCTGTTTTTGATCGATTTTCATGGCGAAATTGAAGATTTCAGGGCCGTGGAGTGGTGTTTTGGACGTGGAACTGGATAATTGGACTGTGATCATGTTGAGGGAGGAAATAGCAAGGCGATCGAACTGTGGGGTTGAGTCGATCAATTTGATTTGCGGTGGTAGAATCTTGAAAGATGGCGATGGAGGCGAGAAACTACTCGATTTGGGTGTTAAGAACAACTCACGGATTCTTGCTAGGCGGGTTTCTACTGAAGAGGGCAAGTCACTCAACGTTGAGTTGATGGCTGAGGAAGAACGCTCTAACAGGCTTGCTCGAGTCAAGGCAGCTGCCACTGCTTTAGCCAAGAGACATGCTAATGGTTTCCTCCCAGTTGAAGATTTCAATATAGAACTTGAGGATCAAAGTGGACAGAAAGTTAATTTGGGGTCTGAAACTGATCAAAGGGCAATCATGATGGGCTTGATGCTTCATGCAAACGCAAAGCAGCTTATAAGAAAGGGAAATTACAAAGAAGCATTAGAAGTACTCATCATGGGAGAGGTATGTTACTGGTTGATCATTTTAATTGTCTTCAATATTATCTACGAAATATTAGCTGTTTTCCCCTTTGTTTTAAGAATTAGCTACAAGATCCAAATGATTTAA

Coding sequence (CDS)

ATGGCGAAATTGAAGATTTCAGGGCCGTGGAGTGGTGTTTTGGACGTGGAACTGGATAATTGGACTGTGATCATGTTGAGGGAGGAAATAGCAAGGCGATCGAACTGTGGGGTTGAGTCGATCAATTTGATTTGCGGTGGTAGAATCTTGAAAGATGGCGATGGAGGCGAGAAACTACTCGATTTGGGTGTTAAGAACAACTCACGGATTCTTGCTAGGCGGGTTTCTACTGAAGAGGGCAAGTCACTCAACGTTGAGTTGATGGCTGAGGAAGAACGCTCTAACAGGCTTGCTCGAGTCAAGGCAGCTGCCACTGCTTTAGCCAAGAGACATGCTAATGGTTTCCTCCCAGTTGAAGATTTCAATATAGAACTTGAGGATCAAAGTGGACAGAAAGTTAATTTGGGGTCTGAAACTGATCAAAGGGCAATCATGATGGGCTTGATGCTTCATGCAAACGCAAAGCAGCTTATAAGAAAGGGAAATTACAAAGAAGCATTAGAAGTACTCATCATGGGAGAGGTATGTTACTGGTTGATCATTTTAATTGTCTTCAATATTATCTACGAAATATTAGCTGTTTTCCCCTTTGTTTTAAGAATTAGCTACAAGATCCAAATGATTTAA

Homology

[Close]

BLAST of CmoCh12G012020 vs. TrEMBL
Match: A0A0A0LI64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008690 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.6e-81
Identity = 156/179 (87.15%), Postives = 169/179 (94.41%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKISGPW+GVLDVELDNWTV+MLREEIARRSNCGVESINLI GGRILKDGDG EKL+
Sbjct: 1   MAKLKISGPWTGVLDVELDNWTVVMLREEIARRSNCGVESINLISGGRILKDGDGSEKLV 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNNSRILARRV+ EEGK+L  ELMAEEERS+RLARVKAAATALA+RHANGFLPVED
Sbjct: 61  HLGLKNNSRILARRVAAEEGKALKNELMAEEERSSRLARVKAAATALAERHANGFLPVED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FN+ELEDQSGQKVN GSETDQ+AIMMGLMLHANAKQLIRKGNYK+ALEVL+MGE  + L
Sbjct: 121 FNMELEDQSGQKVNFGSETDQKAIMMGLMLHANAKQLIRKGNYKDALEVLVMGEEAFTL 179

[Close]

BLAST of CmoCh12G012020 vs. TrEMBL
Match: M5VPG1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004340mg PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.0e-68
Identity = 134/179 (74.86%), Postives = 154/179 (86.03%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKI+G W+GVL+VEL++WTV MLREE+A+RSNC   SINLIC GR+LKDGDG EKL 
Sbjct: 1   MAKLKIAGTWAGVLEVELEDWTVPMLREEVAKRSNCESNSINLICAGRVLKDGDGNEKLA 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNN++ILA RV  EEGKSL  EL+AE+ERS RLARVKAAATALAKRHA+G LP+ED
Sbjct: 61  QLGIKNNAKILASRVCAEEGKSLKEELLAEDERSRRLARVKAAATALAKRHADGSLPIED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FNI LEDQSG+KV LGSETDQRAIMMGLMLH N KQLI++ NYK+ALEVL MGE  + L
Sbjct: 121 FNIVLEDQSGKKVQLGSETDQRAIMMGLMLHTNGKQLIKRQNYKDALEVLAMGEEAFSL 179

[Close]

BLAST of CmoCh12G012020 vs. TrEMBL
Match: A0A059CXZ4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C04403 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-65
Identity = 125/174 (71.84%), Postives = 151/174 (86.78%), Query Frame = 1


Query: 2   AKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLLD 61
           AKLK++G W+G ++VEL+ WTV MLREE+ARRS    +SINLICGG++LKDGDG  KL +
Sbjct: 3   AKLKVAGTWAGAIEVELEGWTVPMLREEVARRSGLSPDSINLICGGKVLKDGDGAAKLSE 62

Query: 62  LGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVEDF 121
           LGV+ N++IL+ RV  ++GKSL  E MAE+ERS RLARVKAAATALAKRHA+G LP+EDF
Sbjct: 63  LGVRGNAKILSTRVCVDQGKSLKEEAMAEDERSRRLARVKAAATALAKRHADGSLPLEDF 122

Query: 122 NIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEV 176
           NIELEDQSGQKVN+GSETDQRA+MMGLMLH+NAKQLIR+  YK+ALEVL MGE+
Sbjct: 123 NIELEDQSGQKVNMGSETDQRAVMMGLMLHSNAKQLIRRQKYKDALEVLAMGEI 176

[Close]

BLAST of CmoCh12G012020 vs. TrEMBL
Match: A0A067KDB5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16987 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.7e-63
Identity = 126/179 (70.39%), Postives = 152/179 (84.92%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKI+G W GVL+VEL+NWTV MLREE+A++S  G ESINLIC G++LKDGDG EKL 
Sbjct: 1   MAKLKIAGTWVGVLEVELENWTVHMLREEVAKQSKMGSESINLICAGKVLKDGDGNEKLS 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNNS+ILA RVS EEGKSL  ELMA+EER+ RLARVKA+ TAL+KRHA+G LP+ED
Sbjct: 61  QLGIKNNSKILASRVSIEEGKSLKQELMADEERNRRLARVKASVTALSKRHADGSLPIED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FN+ELEDQSGQK++  SETD++AIMMGLMLHAN K LI++  +K+ALEVL MGE  + L
Sbjct: 121 FNLELEDQSGQKLHF-SETDRQAIMMGLMLHANGKGLIKRQKFKDALEVLTMGEESFSL 178

[Close]

BLAST of CmoCh12G012020 vs. TrEMBL
Match: K4CBK7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.2e-62
Identity = 127/180 (70.56%), Postives = 151/180 (83.89%), Query Frame = 1


Query: 2   AKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCG--VESINLICGGRILKDGDGGEKL 61
           AKLKI G WSGVL+VEL+ WTV+MLREE+A+RS  G   E+INLIC G++LKDGDG EKL
Sbjct: 4   AKLKIGGAWSGVLEVELEEWTVVMLREEVAKRSGHGGGPETINLICAGKLLKDGDGTEKL 63

Query: 62  LDLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVE 121
             LGV+NN++ILA RVS ++GKS+  E +AEEERS RL+R+KAAA +L+ RHA+G LPVE
Sbjct: 64  SQLGVRNNAKILASRVSVDQGKSVKEESLAEEERSTRLSRLKAAAISLSARHADGSLPVE 123

Query: 122 DFNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           DFN+ELE+QSGQKV LGSETDQRAIMMGLMLHANAK L+RK  YKEALEVL MGE  + L
Sbjct: 124 DFNLELENQSGQKVQLGSETDQRAIMMGLMLHANAKALMRKKKYKEALEVLTMGEEAFSL 183

[Close]

BLAST of CmoCh12G012020 vs. TAIR10
Match: AT2G12550.1 (AT2G12550.1 ubiquitin-associated (UBA)/TS-N domain-containing protein)

HSP 1 Score: 200.7 bits (509), Expect = 9.0e-52
Identity = 108/181 (59.67%), Postives = 135/181 (74.59%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKD-GDGGEKL 60
           MAKLK++G W G+L+VEL+NWT+ MLR+E+A+RS    ESI LI  G+ILKD GD    L
Sbjct: 1   MAKLKVAGTWGGILEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTL 60

Query: 61  LDLGVKNNSRILA-RRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPV 120
             LG+K NS+IL+ R+ + EEGKS+    MAEEER+ RL+RVKAAATAL+KRHA+G LP+
Sbjct: 61  SQLGIKENSKILSCRQAAPEEGKSI----MAEEERARRLSRVKAAATALSKRHADGSLPI 120

Query: 121 EDFNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYW 180
           +D+NIELEDQ G KV  G+ETDQ A MMGLMLH  AK LI    Y +A+EVL M E  + 
Sbjct: 121 QDYNIELEDQGGHKVQFGTETDQSAAMMGLMLHTKAKSLIEIEMYSDAVEVLAMAEESFL 177

[Close]

BLAST of CmoCh12G012020 vs. NCBI nr
Match: gi|449443021|ref|XP_004139279.1| (PREDICTED: NEDD8 ultimate buster 1 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 5.1e-81
Identity = 156/179 (87.15%), Postives = 169/179 (94.41%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKISGPW+GVLDVELDNWTV+MLREEIARRSNCGVESINLI GGRILKDGDG EKL+
Sbjct: 1   MAKLKISGPWTGVLDVELDNWTVVMLREEIARRSNCGVESINLISGGRILKDGDGSEKLV 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNNSRILARRV+ EEGK+L  ELMAEEERS+RLARVKAAATALA+RHANGFLPVED
Sbjct: 61  HLGLKNNSRILARRVAAEEGKALKNELMAEEERSSRLARVKAAATALAERHANGFLPVED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FN+ELEDQSGQKVN GSETDQ+AIMMGLMLHANAKQLIRKGNYK+ALEVL+MGE  + L
Sbjct: 121 FNMELEDQSGQKVNFGSETDQKAIMMGLMLHANAKQLIRKGNYKDALEVLVMGEEAFTL 179

[Close]

BLAST of CmoCh12G012020 vs. NCBI nr
Match: gi|659070931|ref|XP_008457303.1| (PREDICTED: NEDD8 ultimate buster 1 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 8.7e-81
Identity = 158/179 (88.27%), Postives = 167/179 (93.30%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKISGPW+GVLDVELDNWTV MLREEIARRSNC VESINLI GGRILKDGDG EKL+
Sbjct: 1   MAKLKISGPWTGVLDVELDNWTVRMLREEIARRSNCSVESINLISGGRILKDGDGSEKLV 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNNSRILARRVSTEEGK+L  ELMAEEERS RLARVKAAATALA+RHANGFLPVED
Sbjct: 61  HLGLKNNSRILARRVSTEEGKALKNELMAEEERSTRLARVKAAATALAERHANGFLPVED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FNIELEDQSGQKVN GSETDQ+AIMMGLMLHANAKQLIRKGNYK+ALEVL+MGE  + L
Sbjct: 121 FNIELEDQSGQKVNFGSETDQKAIMMGLMLHANAKQLIRKGNYKDALEVLVMGEEAFTL 179

[Close]

BLAST of CmoCh12G012020 vs. NCBI nr
Match: gi|645275652|ref|XP_008242924.1| (PREDICTED: NEDD8 ultimate buster 1 isoform X1 [Prunus mume])

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 134/179 (74.86%), Postives = 154/179 (86.03%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKI+G W+GVL+VEL++WTV MLREE+A+RSNC   SINLIC GR+LKDGDG EKL 
Sbjct: 1   MAKLKIAGTWAGVLEVELEDWTVPMLREEVAKRSNCESNSINLICAGRVLKDGDGNEKLA 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNN++ILA RV  EEGKSL  EL+AE+ERS RLARVKAAATALAKRHA+G LP+ED
Sbjct: 61  QLGIKNNAKILASRVCAEEGKSLKEELLAEDERSRRLARVKAAATALAKRHADGSLPIED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FNI LEDQSG+KV LGSETDQRAIMMGLMLH N KQLI++ NYK+ALEVL MGE  + L
Sbjct: 121 FNIVLEDQSGKKVQLGSETDQRAIMMGLMLHTNGKQLIKRQNYKDALEVLAMGEEAFSL 179

[Close]

BLAST of CmoCh12G012020 vs. NCBI nr
Match: gi|595802960|ref|XP_007201940.1| (hypothetical protein PRUPE_ppa004340mg [Prunus persica])

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 134/179 (74.86%), Postives = 154/179 (86.03%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKI+G W+GVL+VEL++WTV MLREE+A+RSNC   SINLIC GR+LKDGDG EKL 
Sbjct: 1   MAKLKIAGTWAGVLEVELEDWTVPMLREEVAKRSNCESNSINLICAGRVLKDGDGNEKLA 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNN++ILA RV  EEGKSL  EL+AE+ERS RLARVKAAATALAKRHA+G LP+ED
Sbjct: 61  QLGIKNNAKILASRVCAEEGKSLKEELLAEDERSRRLARVKAAATALAKRHADGSLPIED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FNI LEDQSG+KV LGSETDQRAIMMGLMLH N KQLI++ NYK+ALEVL MGE  + L
Sbjct: 121 FNIVLEDQSGKKVQLGSETDQRAIMMGLMLHTNGKQLIKRQNYKDALEVLAMGEEAFSL 179

[Close]

BLAST of CmoCh12G012020 vs. NCBI nr
Match: gi|645275654|ref|XP_008242925.1| (PREDICTED: NEDD8 ultimate buster 1 isoform X2 [Prunus mume])

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 134/179 (74.86%), Postives = 154/179 (86.03%), Query Frame = 1


Query: 1   MAKLKISGPWSGVLDVELDNWTVIMLREEIARRSNCGVESINLICGGRILKDGDGGEKLL 60
           MAKLKI+G W+GVL+VEL++WTV MLREE+A+RSNC   SINLIC GR+LKDGDG EKL 
Sbjct: 1   MAKLKIAGTWAGVLEVELEDWTVPMLREEVAKRSNCESNSINLICAGRVLKDGDGNEKLA 60

Query: 61  DLGVKNNSRILARRVSTEEGKSLNVELMAEEERSNRLARVKAAATALAKRHANGFLPVED 120
            LG+KNN++ILA RV  EEGKSL  EL+AE+ERS RLARVKAAATALAKRHA+G LP+ED
Sbjct: 61  QLGIKNNAKILASRVCAEEGKSLKEELLAEDERSRRLARVKAAATALAKRHADGSLPIED 120

Query: 121 FNIELEDQSGQKVNLGSETDQRAIMMGLMLHANAKQLIRKGNYKEALEVLIMGEVCYWL 180
           FNI LEDQSG+KV LGSETDQRAIMMGLMLH N KQLI++ NYK+ALEVL MGE  + L
Sbjct: 121 FNIVLEDQSGKKVQLGSETDQRAIMMGLMLHTNGKQLIKRQNYKDALEVLAMGEEAFSL 179

The following BLAST results are available for this feature:

BLAST of CmoCh12G012020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh12G012020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI64_CUCSA	3.6e-81	87.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008690 PE=4 SV=1	[more]
M5VPG1_PRUPE	2.0e-68	74.86	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004340mg PE=4 SV=1	[more]
A0A059CXZ4_EUCGR	2.7e-65	71.84	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C04403 PE=4 SV=1	[more]
A0A067KDB5_JATCU	9.7e-63	70.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16987 PE=4 SV=1	[more]
K4CBK7_SOLLC	2.2e-62	70.56	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CmoCh12G012020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G12550.1	9.0e-52	59.67	ubiquitin-associated (UBA)/TS-N domain-containing protein	[more]

BLAST of CmoCh12G012020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443021\|ref\|XP_004139279.1\|	5.1e-81	87.15	PREDICTED: NEDD8 ultimate buster 1 [Cucumis sativus]	[more]
gi\|659070931\|ref\|XP_008457303.1\|	8.7e-81	88.27	PREDICTED: NEDD8 ultimate buster 1 [Cucumis melo]	[more]
gi\|645275652\|ref\|XP_008242924.1\|	2.9e-68	74.86	PREDICTED: NEDD8 ultimate buster 1 isoform X1 [Prunus mume]	[more]
gi\|595802960\|ref\|XP_007201940.1\|	2.9e-68	74.86	hypothetical protein PRUPE_ppa004340mg [Prunus persica]	[more]
gi\|645275654\|ref\|XP_008242925.1\|	2.9e-68	74.86	PREDICTED: NEDD8 ultimate buster 1 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G012020.1	CmoCh12G012020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 22..70 score: 9
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 15..70 score: 6.
None	No IPR available	PANTHER	PTHR12948	NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN	coord: 1..174 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G012020	Cucsa.132550	Cucumber (Gy14) v1	cgycmoB0359
CmoCh12G012020	CmaCh12G011770	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G012020	Cla016663	Watermelon (97103) v1	cmowmB159
CmoCh12G012020	Csa2G008690	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G012020	MELO3C004484	Melon (DHL92) v3.5.1	cmomeB166
CmoCh12G012020	ClCG11G003510	Watermelon (Charleston Gray)	cmowcgB134
CmoCh12G012020	CSPI02G02180	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G012020	Lsi11G003630	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G012020	Cp4.1LG07g11110	Cucurbita pepo (Zucchini)	cmocpeB178
CmoCh12G012020	MELO3C004484.2	Melon (DHL92) v3.6.1	cmomedB182
CmoCh12G012020	CsaV3_2G003380	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G012020	Cla97C11G210030	Watermelon (97103) v2	cmowmbB156
CmoCh12G012020	Bhi06G001593	Wax gourd	cmowgoB0171
CmoCh12G012020	CsGy2G002280	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G012020	Carg17472	Silver-seed gourd	carcmoB0356

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G012020	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G012020	Silver-seed gourd	carcmoB0776
CmoCh12G012020	Cucumber (Chinese Long) v3	cmocucB0193
CmoCh12G012020	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh12G012020	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G012020	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G012020	Watermelon (Charleston Gray)	cmowcgB152
CmoCh12G012020	Watermelon (97103) v1	cmowmB147
CmoCh12G012020	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G012020	Cucumber (Gy14) v2	cgybcmoB275