CmoCh12G011910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr12 : 10731280 .. 10731888 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTACCGTGATCCTTCAGCCGCAGGATTGCCTTGGGAACGGGTTACGCCACCAAGGTTTGGTTCTGTCGTCTCCGCCTTTGAAATCGCGGCGGAATTCTAACCGTATTAGTTCTAGTTCTTCTTCTGCAAACCCTAATTTTAATCAGGATGATGCGACTTGTTCCGGTAGGCGGCGGAGTTCGGAAGTGGGAGTTAAGGCTAACCGTCGAGTGAATAGAGGTCGGAGTCGGGTGGTAGAGACGTCCACGGCGGCGAAGATTTCACCGAAGAATCTGGTTATGGGACAAGTCAAGATCTTGAAGCGTGGAGAGATGTTGTGTCCCGATGGAGGTGTTGGTGATGGTGGTAAGAGGATGTTGGAATCGAAGGTTGAGGATTTGGATTTGGTTTTGGGATCGACTGATCGGTTGGGTCCAGACCCTGATTTGATGCAGAAGCAGGTTGTATTTTCGGAATTGAAGGTTGCCGATGGGATCTATGCTGGATCGGGTGCGTTCTTTGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCCTTTTTAGGTAAGAACGGTACTGCAACTAACGATCTGCGGCGGTTGTTGCGACTTGATTTGGACTGA

mRNA sequence

ATGGCTACTACCGTGATCCTTCAGCCGCAGGATTGCCTTGGGAACGGGTTACGCCACCAAGGTTTGGTTCTGTCGTCTCCGCCTTTGAAATCGCGGCGGAATTCTAACCGTATTAGTTCTAGTTCTTCTTCTGCAAACCCTAATTTTAATCAGGATGATGCGACTTGTTCCGGTAGGCGGCGGAGTTCGGAAGTGGGAGTTAAGGCTAACCGTCGAGTGAATAGAGGTCGGAGTCGGGTGGTAGAGACGTCCACGGCGGCGAAGATTTCACCGAAGAATCTGGTTATGGGACAAGTCAAGATCTTGAAGCGTGGAGAGATGTTGTGTCCCGATGGAGGTGTTGGTGATGGTGGTAAGAGGATGTTGGAATCGAAGGTTGAGGATTTGGATTTGGTTTTGGGATCGACTGATCGGTTGGGTCCAGACCCTGATTTGATGCAGAAGCAGGTTGTATTTTCGGAATTGAAGGTTGCCGATGGGATCTATGCTGGATCGGGTGCGTTCTTTGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCCTTTTTAGGTAAGAACGGTACTGCAACTAACGATCTGCGGCGGTTGTTGCGACTTGATTTGGACTGA

Coding sequence (CDS)

ATGGCTACTACCGTGATCCTTCAGCCGCAGGATTGCCTTGGGAACGGGTTACGCCACCAAGGTTTGGTTCTGTCGTCTCCGCCTTTGAAATCGCGGCGGAATTCTAACCGTATTAGTTCTAGTTCTTCTTCTGCAAACCCTAATTTTAATCAGGATGATGCGACTTGTTCCGGTAGGCGGCGGAGTTCGGAAGTGGGAGTTAAGGCTAACCGTCGAGTGAATAGAGGTCGGAGTCGGGTGGTAGAGACGTCCACGGCGGCGAAGATTTCACCGAAGAATCTGGTTATGGGACAAGTCAAGATCTTGAAGCGTGGAGAGATGTTGTGTCCCGATGGAGGTGTTGGTGATGGTGGTAAGAGGATGTTGGAATCGAAGGTTGAGGATTTGGATTTGGTTTTGGGATCGACTGATCGGTTGGGTCCAGACCCTGATTTGATGCAGAAGCAGGTTGTATTTTCGGAATTGAAGGTTGCCGATGGGATCTATGCTGGATCGGGTGCGTTCTTTGCTTCGCCGCCTCCGAGTTCAGTGCCCTTGCCGTCCTTTTTAGGTAAGAACGGTACTGCAACTAACGATCTGCGGCGGTTGTTGCGACTTGATTTGGACTGA

Homology

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BLAST of CmoCh12G011910 vs. TrEMBL
Match: A0A0A0LG41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008780 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-66
Identity = 148/205 (72.20%), Postives = 169/205 (82.44%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRR-S 63
           TVIL PQDCLG GLRHQGLVLS+P L SRRNSN  +S+S+S+NPN N D  +CSGRRR S
Sbjct: 3   TVILPPQDCLGKGLRHQGLVLSAP-LSSRRNSNP-NSTSTSSNPNLNHDARSCSGRRRRS 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----- 123
           + VG+KANR+ NR RSRV E+ST AK++ ++LVMGQVKILKRGE+L PD GVG G     
Sbjct: 63  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 122

Query: 124 GKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV 183
           GKR LESK E++DLVLGSTDRLGPD DLMQKQVV ++ K  DG+YAGSGAFFASPPPSSV
Sbjct: 123 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSV 182

Query: 184 PLPSFLGKNGTATNDLRRLLRLDLD 203
           PLPSF  KNG AT DLRRLLRLDL+
Sbjct: 183 PLPSFAVKNGIATTDLRRLLRLDLE 203

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BLAST of CmoCh12G011910 vs. TrEMBL
Match: M5VR81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009094mg PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 106/204 (51.96%), Postives = 137/204 (67.16%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQD-DATCSGRRRS 63
           T IL+ QDCL    RH+ L L+  P    R S   S+ + + +PN+  + +   S RR+ 
Sbjct: 104 TAILRSQDCLRGRFRHEALTLT--PRSGSRRSPNFSNPNPNPSPNYGSNANLHQSRRRKR 163

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDG-----GVGDG 123
           S +G ++N+  +R R R  + +  AK+  KNLVMGQVKIL+RGE L P+      GV  G
Sbjct: 164 SPMGFQSNQH-DRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 223

Query: 124 GKRMLESKVEDL-DLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSS 183
                 +K ED+ DLVLGSTDRLGPDP+ +QKQ+  +E KV D IYAGS AF+ASPPPSS
Sbjct: 224 DAGKPRAKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPPPSS 283

Query: 184 VPLPSFLGKNGTATNDLRRLLRLD 201
           VPLP+FLG+NGTAT+DLRRLLRLD
Sbjct: 284 VPLPAFLGRNGTATSDLRRLLRLD 304

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BLAST of CmoCh12G011910 vs. TrEMBL
Match: W9S2D6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011949 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-31
Identity = 102/209 (48.80%), Postives = 128/209 (61.24%), Query Frame = 1


Query: 6   ILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSSEV 65
           +L+ QDC G     + L L++P  +SRR  N    S +S++P         S RR+ S V
Sbjct: 5   VLRSQDCRGGRFGDESLKLTAP-FRSRRKPNFPILSPNSSDPQ--------SRRRKRSPV 64

Query: 66  GVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLC-----PDGGVG----D 125
           G +++ + +R  SR    +   K    NLVMGQVKILKRGE L       + GVG    +
Sbjct: 65  GFQSSPQ-DRDPSRSRYGALVEKAPANNLVMGQVKILKRGETLSLSPARNNRGVGVVAGE 124

Query: 126 GGKRMLESKV-EDLDLVLGSTDRLGPDPDLMQKQVVFSELKV---ADGIYAGSGAFFASP 185
             ++    KV    DLVLGSTDRLGPDP+ ++KQV  S  KV   ADG+YAGSGAFF SP
Sbjct: 125 SNRKSTAKKVGAGADLVLGSTDRLGPDPETVKKQVRVSNHKVVASADGLYAGSGAFFPSP 184

Query: 186 PPSSVPLPSFLGKNGTATNDLRRLLRLDL 202
           PPSSVPLP+FLGKN  AT DLRRLL+LDL
Sbjct: 185 PPSSVPLPAFLGKNDAATTDLRRLLQLDL 203

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BLAST of CmoCh12G011910 vs. TrEMBL
Match: F6HCJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0149g00060 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-31
Identity = 101/206 (49.03%), Postives = 125/206 (60.68%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSS 63
           TV+L+ QDCL +   H   +  SP LKSR N N      S+ NPN      T + RR+ S
Sbjct: 3   TVVLRSQDCLRDRF-HPETLTYSPLLKSRPNPN------SNPNPN-----GTRARRRKRS 62

Query: 64  EVGVKANRRVNRGRSRVVET--STAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKRM 123
            +G + N     G  RV +   S   K   +NLVMGQV ILKRGE L      G G  R 
Sbjct: 63  PLGFQDN-----GNDRVPDRYGSMVVKSPARNLVMGQVTILKRGEALSLPKNRGLGNDRK 122

Query: 124 LESKVE-DLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLP 183
             ++ E DLDL+LGSTDRLGP+P+++QK++  SE KV DG+YAGS AFF+SPPPSS+PLP
Sbjct: 123 GRARREADLDLMLGSTDRLGPEPEMVQKEIRVSESKVVDGLYAGS-AFFSSPPPSSLPLP 182

Query: 184 SFLGK------NGTATNDLRRLLRLD 201
            F  K      N  AT+DLRRLLRLD
Sbjct: 183 LFFTKKDGSPSNDAATSDLRRLLRLD 190

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BLAST of CmoCh12G011910 vs. TrEMBL
Match: I3SNI4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g116830 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 94/200 (47.00%), Postives = 123/200 (61.50%), Query Frame = 1


Query: 4   TVILQPQDCLGNG-LRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRS 63
           T IL+  DCL    L +  L + S  ++SR+NSN   +  S  N N + +      RR+ 
Sbjct: 3   TAILRSHDCLQRRFLPNDALSIPSSQIRSRKNSNPNPNCKSYVNNNNHHNR-----RRKR 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKRML 123
           S V    + + +R      + S    ++P  LVMGQVKILKRGE L P+  V     + +
Sbjct: 63  SPVTTGQSNQHDR------KQSVDRTVAPTKLVMGQVKILKRGEKLSPEIVVPVAEDQKV 122

Query: 124 ESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLPSF 183
           ++ V+ +DLVLGSTDR GPDP  MQKQ+  S+    D IYAGSG F +SPPPSSVP+P F
Sbjct: 123 KA-VKAMDLVLGSTDRFGPDPITMQKQIRVSDSVSKDVIYAGSG-FVSSPPPSSVPVPGF 182

Query: 184 LGKNGTATNDLRRLLRLDLD 203
           LGKNG AT+DLRRLLRLDL+
Sbjct: 183 LGKNGVATSDLRRLLRLDLE 189

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BLAST of CmoCh12G011910 vs. TAIR10
Match: AT4G32020.1 (AT4G32020.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 67/197 (34.01%), Postives = 88/197 (44.67%), Query Frame = 1


Query: 6   ILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRRSSEV 65
           +L PQDCL +   H      +P     R    +S++ +  +P  +Q         RSS  
Sbjct: 5   VLNPQDCLKDPFSHMKQH-RNPSACPNRQKKTVSNNRTRRSPPRSQSS-------RSSSP 64

Query: 66  GVKANRRVNRGR-SRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDGGKRMLES 125
            V       R   S  V   T  K     + + QV+ILKRGE +          K   + 
Sbjct: 65  PVAPPLPPPRAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGEEI---------PKETSDL 124

Query: 126 KVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVPLPSFLG 185
            VE  D  LGST R+GPDP L+  Q+  S  K     +        SPPPS VPLP+F  
Sbjct: 125 VVEMSD--LGSTRRIGPDPGLIPGQIRLSGRKSKSAPFYAGPVTMTSPPPSDVPLPAFFT 180

Query: 186 KNGTATNDLRRLLRLDL 202
           K   ATNDL R+LRLD+
Sbjct: 185 KK--ATNDLIRILRLDI 180

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BLAST of CmoCh12G011910 vs. TAIR10
Match: AT4G02040.1 (AT4G02040.1 unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 75  RGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCP-----DGGVGDGGKRMLESKVEDL 134
           R +S  V  S AA     NLVM QVKILKRGE L       +    D  +R +   ++D+
Sbjct: 39  RKQSPTVVKSPAAN---PNLVMEQVKILKRGETLSAFNKNKENISSDDTRRPVLKMIKDV 98

Query: 135 DLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFA-SPPPSSVPLPSFLG 185
           DL++ +T+R+GP+P+++ KQ+       A G+ + +GA  + SPPPS VP+P FLG
Sbjct: 99  DLIVSATNRIGPEPEILMKQI------GALGLQSFAGANCSLSPPPSCVPIPCFLG 145

[Close]

BLAST of CmoCh12G011910 vs. TAIR10
Match: AT3G21570.1 (AT3G21570.1 unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-06
Identity = 32/67 (47.76%), Postives = 37/67 (55.22%), Query Frame = 1


Query: 152 FSELKV--------ADGIYAGSGAFFASPPPSSVPLPSFLGK-----------NGTATND 200
           FS +KV        AD IYAGS  F  SP PSS+PLPSF  K           + +A+ D
Sbjct: 68  FSNIKVRKYSPEVSADDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVVVVSIDDSASQD 127

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BLAST of CmoCh12G011910 vs. TAIR10
Match: AT2G25250.1 (AT2G25250.1 unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-06
Identity = 39/119 (32.77%), Postives = 54/119 (45.38%), Query Frame = 1


Query: 90  SPKNLVMGQVKILKRGEMLCPDGGVGDGGKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQ 149
           SP N     V+ILKRGE +             ++  +E  DL   S  ++G DP  +   
Sbjct: 51  SPHNHT-NHVRILKRGEDI------------NVKIPIEKPDLK--SNRQIGSDPMKISTP 110

Query: 150 VVFSELKVADGIYAGSGAFFASPPPSSVPLPSFLG-------KNGTATNDLRRLLRLDL 202
           +  S  K    ++        SPPPS VPLP+F         K   ATNDL ++LRLD+
Sbjct: 111 IRISNRKSMPALFYAGPVTSTSPPPSEVPLPAFFANKTVAGFKPTDATNDLIKILRLDI 154

[Close]

BLAST of CmoCh12G011910 vs. NCBI nr
Match: gi|659070816|ref|XP_008456814.1| (PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 153/207 (73.91%), Postives = 173/207 (83.57%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRR-S 63
           TVIL PQDCLG GLRHQGLVLS+P L SRRNSN  +S+S+S+NPNFN DD +CSGRRR S
Sbjct: 3   TVILPPQDCLGKGLRHQGLVLSAP-LNSRRNSNP-NSASTSSNPNFNHDDKSCSGRRRRS 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----- 123
           + VG+KANR+ NR RSRV E+ST AK++ K+LVMGQVKILKRGE+L P  GVG G     
Sbjct: 63  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 122

Query: 124 --GKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPS 183
             GKR LESKVE++DLVLGSTDRLGPDPDLMQKQVV +E K  DG+YAGSGAFFASPPPS
Sbjct: 123 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 182

Query: 184 SVPLPSFLGKNGTATNDLRRLLRLDLD 203
           SVPLPSF+ KNG AT DLRRLLRLDL+
Sbjct: 183 SVPLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of CmoCh12G011910 vs. NCBI nr
Match: gi|778666298|ref|XP_011648719.1| (PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 2.6e-66
Identity = 148/205 (72.20%), Postives = 169/205 (82.44%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSGRRR-S 63
           TVIL PQDCLG GLRHQGLVLS+P L SRRNSN  +S+S+S+NPN N D  +CSGRRR S
Sbjct: 3   TVILPPQDCLGKGLRHQGLVLSAP-LSSRRNSNP-NSTSTSSNPNLNHDARSCSGRRRRS 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----- 123
           + VG+KANR+ NR RSRV E+ST AK++ ++LVMGQVKILKRGE+L PD GVG G     
Sbjct: 63  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 122

Query: 124 GKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSV 183
           GKR LESK E++DLVLGSTDRLGPD DLMQKQVV ++ K  DG+YAGSGAFFASPPPSSV
Sbjct: 123 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSV 182

Query: 184 PLPSFLGKNGTATNDLRRLLRLDLD 203
           PLPSF  KNG AT DLRRLLRLDL+
Sbjct: 183 PLPSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CmoCh12G011910 vs. NCBI nr
Match: gi|645275588|ref|XP_008242890.1| (PREDICTED: uncharacterized protein LOC103341189 [Prunus mume])

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 108/204 (52.94%), Postives = 139/204 (68.14%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQD-DATCSGRRRS 63
           T IL+ QDCL   LRH+ L L+  P    R S   S+ + + +PN+  + +   S RR+ 
Sbjct: 3   TAILRSQDCLRGRLRHEALTLT--PRSGSRRSPNFSNPNPNHSPNYGSNANLHQSRRRKR 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDG-----GVGDG 123
           S +G ++N+  +RGR R  + +  AK+  KNLVMGQVKIL+RGE L P+      GV  G
Sbjct: 63  SPMGFQSNQH-DRGRDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 122

Query: 124 GKRMLESKVEDL-DLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSS 183
                 +K ED+ DLVLGSTDRLGPDP+ +QKQ+  +E KV D IYAGS AF+ASPPPSS
Sbjct: 123 DAGKPRAKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPPPSS 182

Query: 184 VPLPSFLGKNGTATNDLRRLLRLD 201
           VPLP+FLG+NGTAT+DLRRLLRLD
Sbjct: 183 VPLPAFLGRNGTATSDLRRLLRLD 203

[Close]

BLAST of CmoCh12G011910 vs. NCBI nr
Match: gi|694421156|ref|XP_009338438.1| (PREDICTED: uncharacterized protein LOC103930788 [Pyrus x bretschneideri])

HSP 1 Score: 177.9 bits (450), Expect = 1.7e-41
Identity = 105/205 (51.22%), Postives = 134/205 (65.37%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQD-DATCSGRRRS 63
           T IL+ QDCL    RH+ L L+  P    R S+  S+ + ++ PN     +   S RR+ 
Sbjct: 3   TAILRSQDCLRGRFRHEALTLTLSPRSGSRRSSNFSNPNPNSTPNHGSTANIHQSRRRKR 62

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPD------GGVGD 123
           S +G+++N+   R R R  + +  AK   KNLV+GQVKIL+RGE L P+      G V  
Sbjct: 63  SPMGLQSNQH-ERPRDRCSDRAAVAKAPGKNLVIGQVKILRRGEDLNPEKNNRGLGVVAH 122

Query: 124 GGKRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSS 183
             ++    K  D DLVLGSTDRLGPDP+ +QKQ+  +E KV DGIYAGS AF+ASPPPSS
Sbjct: 123 DDRKPKAKKENDPDLVLGSTDRLGPDPETVQKQIKAAEFKVMDGIYAGSSAFYASPPPSS 182

Query: 184 VPLPSFLGKNGTATNDLRRLLRLDL 202
           VPLPSFLG+NG AT+DLRRLLRLDL
Sbjct: 183 VPLPSFLGRNGPATSDLRRLLRLDL 206

[Close]

BLAST of CmoCh12G011910 vs. NCBI nr
Match: gi|595805386|ref|XP_007202287.1| (hypothetical protein PRUPE_ppa009094mg [Prunus persica])

HSP 1 Score: 177.6 bits (449), Expect = 2.2e-41
Identity = 106/204 (51.96%), Postives = 137/204 (67.16%), Query Frame = 1


Query: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQD-DATCSGRRRS 63
           T IL+ QDCL    RH+ L L+  P    R S   S+ + + +PN+  + +   S RR+ 
Sbjct: 104 TAILRSQDCLRGRFRHEALTLT--PRSGSRRSPNFSNPNPNPSPNYGSNANLHQSRRRKR 163

Query: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDG-----GVGDG 123
           S +G ++N+  +R R R  + +  AK+  KNLVMGQVKIL+RGE L P+      GV  G
Sbjct: 164 SPMGFQSNQH-DRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 223

Query: 124 GKRMLESKVEDL-DLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSS 183
                 +K ED+ DLVLGSTDRLGPDP+ +QKQ+  +E KV D IYAGS AF+ASPPPSS
Sbjct: 224 DAGKPRAKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPPPSS 283

Query: 184 VPLPSFLGKNGTATNDLRRLLRLD 201
           VPLP+FLG+NGTAT+DLRRLLRLD
Sbjct: 284 VPLPAFLGRNGTATSDLRRLLRLD 304

The following BLAST results are available for this feature:

BLAST of CmoCh12G011910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh12G011910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG41_CUCSA	1.8e-66	72.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008780 PE=4 SV=1	[more]
M5VR81_PRUPE	1.6e-41	51.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009094mg PE=4 SV=1	[more]
W9S2D6_9ROSA	1.5e-31	48.80	Uncharacterized protein OS=Morus notabilis GN=L484_011949 PE=4 SV=1	[more]
F6HCJ9_VITVI	5.6e-31	49.03	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0149g00060 PE=4 SV=...	[more]
I3SNI4_MEDTR	1.1e-29	47.00	Uncharacterized protein OS=Medicago truncatula GN=MTR_4g116830 PE=2 SV=1	[more]

BLAST of CmoCh12G011910 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32020.1	8.0e-13	34.01	unknown protein	[more]
AT4G02040.1	3.0e-12	40.52	unknown protein	[more]
AT3G21570.1	5.6e-06	47.76	unknown protein	[more]
AT2G25250.1	5.6e-06	32.77	unknown protein	[more]

BLAST of CmoCh12G011910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070816\|ref\|XP_008456814.1\|	1.1e-69	73.91	PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo]	[more]
gi\|778666298\|ref\|XP_011648719.1\|	2.6e-66	72.20	PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus]	[more]
gi\|645275588\|ref\|XP_008242890.1\|	2.0e-42	52.94	PREDICTED: uncharacterized protein LOC103341189 [Prunus mume]	[more]
gi\|694421156\|ref\|XP_009338438.1\|	1.7e-41	51.22	PREDICTED: uncharacterized protein LOC103930788 [Pyrus x bretschneideri]	[more]
gi\|595805386\|ref\|XP_007202287.1\|	2.2e-41	51.96	hypothetical protein PRUPE_ppa009094mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011910.1	CmoCh12G011910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 3..202 score: 1.2
None	No IPR available	PANTHER	PTHR33670:SF3	SUBFAMILY NOT NAMED	coord: 3..202 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011910	CmaCh12G011660	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011910	Cla016646	Watermelon (97103) v1	cmowmB159
CmoCh12G011910	ClCG11G003650	Watermelon (Charleston Gray)	cmowcgB134
CmoCh12G011910	Lsi11G003800	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011910	Cp4.1LG07g11030	Cucurbita pepo (Zucchini)	cmocpeB178
CmoCh12G011910	Cla97C11G210200	Watermelon (97103) v2	cmowmbB156
CmoCh12G011910	Bhi06G001581	Wax gourd	cmowgoB0171
CmoCh12G011910	Carg17461	Silver-seed gourd	carcmoB0356

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011910	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011910	Cucurbita pepo (Zucchini)	cmocpeB169
CmoCh12G011910	Bottle gourd (USVL1VR-Ls)	cmolsiB173
CmoCh12G011910	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011910	Melon (DHL92) v3.6.1	cmomedB160
CmoCh12G011910	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011910	Silver-seed gourd	carcmoB1441
CmoCh12G011910	Cucumber (Chinese Long) v3	cmocucB0171
CmoCh12G011910	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011910	Watermelon (97103) v2	cmowmbB173
CmoCh12G011910	Cucurbita moschata (Rifu)	cmocmoB084
CmoCh12G011910	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh12G011910	Cucumber (Gy14) v1	cgycmoB0359
CmoCh12G011910	Cucumber (Gy14) v1	cgycmoB0959
CmoCh12G011910	Cucurbita maxima (Rimu)	cmacmoB123
CmoCh12G011910	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011910	Wild cucumber (PI 183967)	cmocpiB146
CmoCh12G011910	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011910	Cucumber (Chinese Long) v2	cmocuB147
CmoCh12G011910	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011910	Melon (DHL92) v3.5.1	cmomeB145
CmoCh12G011910	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011910	Watermelon (Charleston Gray)	cmowcgB156
CmoCh12G011910	Watermelon (97103) v1	cmowmB169