CmoCh12G010990 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAATTCCGAGTTTTTGGGGATTTTTATGATCTGGTACTGATTGCGCCTGTGTTTCGATCTGCTGACCTCGAAATGCCTGCTTAAGCTATCTCATGTCTTGATTCCTTCAAATCAGGTAAGGTATGGCGGAATTCGAATGGAACCTAATGAATGCCCTCATTCGTCTTTGAACTTGCGAATGCCTTAGCTATGACTGTCTTGTTGAATTCGAATGATACTGGCTTGATAATTGGATAGGAAGTAGTTTAGATTTGTGGATGATTTGAGCCATTTTGGATTATTATGAGCCATGTTTGCTTGCTGGGTTTTGGAAAAAACAGTGTGTTCTTAGTTTAACATTAGGGCCAAATTGTATCATCTCCACATTTTCAATTGGTAAGTCTATGAATGGCTGTATTAGATTAATTGCCTGCATCTGGAAAATATTCGTAACAGCCCAAGCACACCGCTAGCCGATATTGTCCTCTTAGGGCTTTCCCTTCTGTGTTTTTCCTCAAGGTTTTAAAACGTGTTTACTAGGGAGAGGTTTCTACACCCTTATATGGCCAAACCTACCGTTCAAGGTTTTAAAACGCATCTATTAGGGAGAGGTTTCTACACCCTTATAAGGTCAAACCCACCGTTCAAGGTTTTAAAACGCGTCTACTAGGAAGAGGTTTCCACACCCTTATAAGGCCAACCCCACTGTTCAAGATTTTAAAACGCGTCTACTAAGGAAGATTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGACCAAACCCACCGCTCAAGGTTTTAAAACGTGTCTACTAGGGAGAGGTTACCACAATCTTATAAGGCCAAACCCACTGTTCAAGGTTTTAAAACGCATCTACTAGGGATGAGTTTCCACACCCTTATAAGGCCAAACCCACCGTTCAAGGTTTTAAAACGCGTCTACTAGGAAGATGGCCTACTAGGGAGAGGTTTCCACATCCTTATAAGGCCAAACCCACCGCTCAAGGTTTTAAAATGTGTCTACTAGGGAGAGGCTTTCCCTTCTGAGCTTCCCCTCAAGGTTTTAAAACGCGTCCATTAGGGAGCGATTTTCACACCCTTATAAGGAATGCTTCGCTCCCCTCTCCAACCAATGTGAGATCTCACAATATTGTTTTGGAACCGCTGGGCTAAATTTGTTAATATGTTCTCTGTAGCTCACCTCTATAAGCTAGCTCAAGCTGATTCTAAAACATAGTAGATAGATACTCTTTTCTTTGTCCAAAAAAGGAAGAAACCCGTTGGTATGGATGAATTTTGATACAAATTATACTTTTAGTTTGGTATAGGTTGAATTTTAGAATTGATGTACTGCTACTGATTGGTAAGATAGAGTGATTTGATTGCAGTTTATAGAATGGCAGTCCCTAAATCGTGGCTGTTTGAATTATGTAATGACAGATGAATTGTGAGCTTTCTATTATCTAGGTTTACTATGGCCTTTGTGGTTAAAACAGATCTGTAATCATTTTATTTTATTATAAACGGGTGAGAACTTGAACTTTTGGACTCTAAAAAGAAGGAATTCATGACTTAACCATTAAGCTATATTCATGTTCGTGTAGCAAAAGTGTTTTGAGTATTAGTTCCTAGAAAGTTTGGGGGTGCGGATGTCAGTAGAGGTGGGAAGGAGTTAATACAAATCTGTAATTGTAAAATGGTGGTTGTCATGGTGGCGTTTTCTTCTAATGTTTCTAGATCCTGAAAAGTTATTGGATAGCTGCGTACTTCTGCCAGTCAACTCCATATATTCGCTTGATATAGTACTTGATTTAACAATGATAATTTTGGATATCCAATACGGTAAAAATGTAACAGCCCAAGCCCACCGCTTGCACAAATATTGTCCTCTTTGGACTTTTCCTTTCGGGTTTCCCCTCAAGGTTTTAAAACACGTCTTCTAGGGAGAGGTTTTCACACCCATATAAGGAATGCTTCGTTCCCCTCTCTAATCGATGTAAGATCTCACAATAAACATTCCTCATAAGAGTGTGGAAACCTCTCTATAACATATGCGTTTTAAAACCTTGAGGAGAAGCCAACCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTAGTACAGCCAGACATCGGGTGGTGTGCCAGCGAGGGCACTGGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACAAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTATCAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGGAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGACGGTTACAAAAAAGGTTTCCCCTAATAATTTTCTAAAGTTGTTATGCTCTGCGAGCGCGCGTCGATCTGAAGTTGTCTAGTCTTTCACCCCGTCTTTTGACCCTCCATTGATATTAGAATCAAATTCATGTTCTAGGCTTAGAACAAGAAGGTGGGTGCATTTGGTTAGCCCTTTATTGTATGTTAGTATGGACCAATGCATGCGAGTATGTGGGAAGGGAGGGACATAAAAGGGGCATTCTTACCAGATGATTGCAATTTATCTTGTTTTTACTTGTTTGTAGGTTCTATTTGGCGTCTGCTACTGCAATGGATGGTAGCTTTCCCCAGGATTCAAAATCTCCCTTAACTGTTATGCCAACTAAAACACCAGATGGTGACCAACATTTTCTCTTGTATTTAATCGCTGGTATCTACTTCGGGCCTGACCTCAAAGGTGAAAGGCCAATGAAGTCAGTTCTGCAGAGGCTTGCTGCGGCATTGCCTCCCTATACTTCTGATCAACTTGCTGGATCTCAAATAAAGGTGGTGGAAGTAGAGCGCATCTTTTATTATGTTTTGAGGAAGGCTGATGAATCTCTTATTATGAAAACGTCTTTACTGCACCAGTTCTTCCAAGGGAAGTTCCCTGCGCAAGGCCGAGATATTAGTTTCCCTCAGTTTCCTGATCTCTTTCCACCCGAACTCCATCCCCATTCTCGGTCCAAGAACTGGTATAGGTTTATCGAGAACCTTTCGTTTATCCATAACCCAGATGTCAGCTATCTCAACTCTGAGGATGTTGAAAGGTTCAAGAGGCTAACAGGGCTCAATGACTTCCTTTTGGATAGAGATGCAGCAAGGTCGCACAATTTTTCGGTTCGTAAAGTCCCGCCCAATGTTGAATCTACAGATAATCATAATACATCAAATAAAGAGTTCTCTCCTCTTAAAGATGAGTTGCAATATGACTCTGTTCGTAGTGGTTCATATAATGGTAGCTTGACACCTCCTCAAACTAAATATGACGGTAATCTTGAGGAGAAGAAATTTGGTCCAGCAATGCTATTTCTTCCCAGACAACCATGTGAAGAAGATTGGGCGAGTCTCGTAGCTGCTAACGATACAGGATTTGCATTGACTGGAACTGCAGCAATGGGGCACGTTGGACCGATAATTGGATTGATGGACATTGGAGAATGTGAAGACTCGTACTTGTTTCGTGTGTCGCTTCCCGGCGTTAAAAGAGATGGAAGTAAGTTTCTTTTGATGCTCTGAATCTTCTTATATAACTACTGCATCTGCTCAGGTTTATCTTACAAGAGTATCCATCATTACCCATCCATGAGTCCTAGGAACTGTTTGAACATATCTTTTGGAAATTACTTTCATAAGTTGATTTGTGACATTCCATGTTGGTTGGAGAGGAAAACGAAACATTCCTTATAAGGATGTGAAACCTCTCTCTAGTGGACGTGCTTTAGAACCTTGAGAAGAAACTCAAAGAGACAATATCTACTGGCGGTTTGTTTTCACATCTTAGGAGGGAAAAATTGGTTCTAGTGATAATCGAGGAAATTGATGCATTAACCATTTCTTCCTTTCTATATATGAATCTAGTTGATAATATTTACTTCGATTATCGTGTCCATCCAAAACTATGTTTCTTCATTGTTTTTCATTCATTTATTTTATTTAGTACCACAAATGTGGCGTGGGATGTCAGGATTTAAACCTCCGAGCTCAAGGGAAGGAGTATATGTTAATTACCACTTACCTGTTCATGTTGACCTTTTCAATTTTGAATTATTTCTTTTAGTTTTTTTTATTAATATTGTTAATAAAATGTTGATATGACACGGCTATTAGATAATATGTTTGACACGATATGTCTGATAAATGATAGATACAATGTTTCGTTCTTGGTTGATAGATGGGATGAATATCACTTTAGTCGATCTAGCTGTCAACTTCAAGGACGTAACTGAGATGGTTTTAAATCAAATTTTACAACTTCAATCCTTTTTTTTTTCTTGTGTCATAACTTGATAAGACTTTTGATTCATTGTGATTCAGAGGAATTTAACTGTGAAGTTGAAAAGGATGGCAGAGTAGTGATACAAGGAGTTACAACAACAGGTGAAAGAACAGTGAAAAAGCATTCTCAAGTGTTTGAAATGGTAACCCACAACCTGTGCCCACCAGGAGAGTTTTCACTCTCATTTCAGCTACCTGGCCCCGTTGATCCTCAACAATTCTTAGTTAACTTTGGCATCGATGGGATTCTTGAAGGAGCTGTGATGAAAGAATTTCAGCCATGA ATGCTATCTCATGTCTTGATTCCTTCAAATCAGGTAAGGTTCTATTTGGCGTCTGCTACTGCAATGGATGGTAGCTTTCCCCAGGATTCAAAATCTCCCTTAACTGTTATGCCAACTAAAACACCAGATGGTGACCAACATTTTCTCTTGTATTTAATCGCTGGTATCTACTTCGGGCCTGACCTCAAAGGTGAAAGGCCAATGAAGTCAGTTCTGCAGAGGCTTGCTGCGGCATTGCCTCCCTATACTTCTGATCAACTTGCTGGATCTCAAATAAAGGTGGTGGAAGTAGAGCGCATCTTTTATTATGTTTTGAGGAAGGCTGATGAATCTCTTATTATGAAAACGTCTTTACTGCACCAGTTCTTCCAAGGGAAGTTCCCTGCGCAAGGCCGAGATATTAGTTTCCCTCAGTTTCCTGATCTCTTTCCACCCGAACTCCATCCCCATTCTCGGTCCAAGAACTGGTATAGGTTTATCGAGAACCTTTCGTTTATCCATAACCCAGATGTCAGCTATCTCAACTCTGAGGATGTTGAAAGGTTCAAGAGGCTAACAGGGCTCAATGACTTCCTTTTGGATAGAGATGCAGCAAGGTCGCACAATTTTTCGGTTCGTAAAGTCCCGCCCAATGTTGAATCTACAGATAATCATAATACATCAAATAAAGAGTTCTCTCCTCTTAAAGATGAGTTGCAATATGACTCTGTTCGTAGTGGTTCATATAATGGTAGCTTGACACCTCCTCAAACTAAATATGACGGTAATCTTGAGGAGAAGAAATTTGGTCCAGCAATGCTATTTCTTCCCAGACAACCATGTGAAGAAGATTGGGCGAGTCTCGTAGCTGCTAACGATACAGGATTTGCATTGACTGGAACTGCAGCAATGGGGCACGTTGGACCGATAATTGGATTGATGGACATTGGAGAATGTGAAGACTCGTACTTGTTTCGTGTGTCGCTTCCCGGCGTTAAAAGAGATGGAAAGGAATTTAACTGTGAAGTTGAAAAGGATGGCAGAGTAGTGATACAAGGAGTTACAACAACAGGTGAAAGAACAGTGAAAAAGCATTCTCAAGTGTTTGAAATGGTAACCCACAACCTGTGCCCACCAGGAGAGTTTTCACTCTCATTTCAGCTACCTGGCCCCGTTGATCCTCAACAATTCTTAGTTAACTTTGGCATCGATGGGATTCTTGAAGGAGCTGTGATGAAAGAATTTCAGCCATGA ATGCTATCTCATGTCTTGATTCCTTCAAATCAGGTAAGGTTCTATTTGGCGTCTGCTACTGCAATGGATGGTAGCTTTCCCCAGGATTCAAAATCTCCCTTAACTGTTATGCCAACTAAAACACCAGATGGTGACCAACATTTTCTCTTGTATTTAATCGCTGGTATCTACTTCGGGCCTGACCTCAAAGGTGAAAGGCCAATGAAGTCAGTTCTGCAGAGGCTTGCTGCGGCATTGCCTCCCTATACTTCTGATCAACTTGCTGGATCTCAAATAAAGGTGGTGGAAGTAGAGCGCATCTTTTATTATGTTTTGAGGAAGGCTGATGAATCTCTTATTATGAAAACGTCTTTACTGCACCAGTTCTTCCAAGGGAAGTTCCCTGCGCAAGGCCGAGATATTAGTTTCCCTCAGTTTCCTGATCTCTTTCCACCCGAACTCCATCCCCATTCTCGGTCCAAGAACTGGTATAGGTTTATCGAGAACCTTTCGTTTATCCATAACCCAGATGTCAGCTATCTCAACTCTGAGGATGTTGAAAGGTTCAAGAGGCTAACAGGGCTCAATGACTTCCTTTTGGATAGAGATGCAGCAAGGTCGCACAATTTTTCGGTTCGTAAAGTCCCGCCCAATGTTGAATCTACAGATAATCATAATACATCAAATAAAGAGTTCTCTCCTCTTAAAGATGAGTTGCAATATGACTCTGTTCGTAGTGGTTCATATAATGGTAGCTTGACACCTCCTCAAACTAAATATGACGGTAATCTTGAGGAGAAGAAATTTGGTCCAGCAATGCTATTTCTTCCCAGACAACCATGTGAAGAAGATTGGGCGAGTCTCGTAGCTGCTAACGATACAGGATTTGCATTGACTGGAACTGCAGCAATGGGGCACGTTGGACCGATAATTGGATTGATGGACATTGGAGAATGTGAAGACTCGTACTTGTTTCGTGTGTCGCTTCCCGGCGTTAAAAGAGATGGAAAGGAATTTAACTGTGAAGTTGAAAAGGATGGCAGAGTAGTGATACAAGGAGTTACAACAACAGGTGAAAGAACAGTGAAAAAGCATTCTCAAGTGTTTGAAATGGTAACCCACAACCTGTGCCCACCAGGAGAGTTTTCACTCTCATTTCAGCTACCTGGCCCCGTTGATCCTCAACAATTCTTAGTTAACTTTGGCATCGATGGGATTCTTGAAGGAGCTGTGATGAAAGAATTTCAGCCATGA
BLAST of CmoCh12G010990 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.9e-48 Identity = 89/150 (59.33%), Postives = 117/150 (78.00%), Query Frame = 1
BLAST of CmoCh12G010990 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.9e-40 Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 1
BLAST of CmoCh12G010990 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-31 Identity = 60/115 (52.17%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TrEMBL
Match: Q84KA7_CUCME (Heat-shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 1.9e-179 Identity = 317/392 (80.87%), Postives = 338/392 (86.22%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TrEMBL
Match: A0A0A0LJJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021580 PE=4 SV=1) HSP 1 Score: 630.2 bits (1624), Expect = 1.8e-177 Identity = 314/392 (80.10%), Postives = 337/392 (85.97%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TrEMBL
Match: B9RF37_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431160 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 3.0e-116 Identity = 219/385 (56.88%), Postives = 273/385 (70.91%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TrEMBL
Match: M5W4S1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023477mg PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.9e-110 Identity = 222/421 (52.73%), Postives = 275/421 (65.32%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TrEMBL
Match: W9QBM8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001972 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 5.5e-110 Identity = 212/401 (52.87%), Postives = 274/401 (68.33%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 194.1 bits (492), Expect = 1.7e-49 Identity = 89/150 (59.33%), Postives = 117/150 (78.00%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-41 Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 139.0 bits (349), Expect = 6.3e-33 Identity = 60/115 (52.17%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of CmoCh12G010990 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 115.9 bits (289), Expect = 5.8e-26 Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 1
BLAST of CmoCh12G010990 vs. NCBI nr
Match: gi|659070396|ref|XP_008454867.1| (PREDICTED: uncharacterized protein LOC103495173 [Cucumis melo]) HSP 1 Score: 637.5 bits (1643), Expect = 1.6e-179 Identity = 317/392 (80.87%), Postives = 339/392 (86.48%), Query Frame = 1
BLAST of CmoCh12G010990 vs. NCBI nr
Match: gi|28558784|gb|AAO45755.1| (heat-shock protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 636.7 bits (1641), Expect = 2.7e-179 Identity = 317/392 (80.87%), Postives = 338/392 (86.22%), Query Frame = 1
BLAST of CmoCh12G010990 vs. NCBI nr
Match: gi|449442839|ref|XP_004139188.1| (PREDICTED: uncharacterized protein LOC101212060 [Cucumis sativus]) HSP 1 Score: 630.2 bits (1624), Expect = 2.6e-177 Identity = 314/392 (80.10%), Postives = 337/392 (85.97%), Query Frame = 1
BLAST of CmoCh12G010990 vs. NCBI nr
Match: gi|1009117216|ref|XP_015875197.1| (PREDICTED: increased DNA methylation 2-like [Ziziphus jujuba]) HSP 1 Score: 438.7 bits (1127), Expect = 1.1e-119 Identity = 235/419 (56.09%), Postives = 286/419 (68.26%), Query Frame = 1
BLAST of CmoCh12G010990 vs. NCBI nr
Match: gi|255542586|ref|XP_002512356.1| (PREDICTED: increased DNA methylation 2 [Ricinus communis]) HSP 1 Score: 426.8 bits (1096), Expect = 4.3e-116 Identity = 219/385 (56.88%), Postives = 273/385 (70.91%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |