CmoCh12G010460 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTACCTAAAATGGACTATGTAATGTACTTTATTTGCTCGGTTATGGGTGGGCATTTTACCAAATATTTCTATTGTATACATCTACTTTTATTTTTTACATGTCTACTAATTATATATATATATATATATATATATATATATATACACGACTTAAAAATATTTACCTAAAATATGTCAATAAACTTTTAAACTCTCATCGTTTATATATTAAATAATTATCAATAAAATAACGGTAATAATTACTATTAAAAAATAAAAATAAAATTCAAAATACTTATTTTCTAAAATTAAAGATAAAAAAGAATAAGTAAAATTCATTAAAAAAAAAAGAAAAAAAAAAGAGAGAGAGATTATTTTCCTCCAAATTTAGCTATTTATCATTAAATTTGCTGTAAAGGACAAAAAATATGGGCCCTGTCTCGTCAATTGGGGAAAGGGAAATAGGCCCATTAAGCCCCCATGTGGGCCTGTCTAGGGCTCCGTTTCGCTCGAAATGGCGGCCACAACAGCTCTCCTCTCTCACCTACTTACTATCTTAATAATACCAACGTTTCCCAAATGCTTTGATTTGTAATATTCTAAATCCCTTCAAGGGCACAGTTGCTCTGGTTTTGAGGGATTTTAGGGGCTCGATCCGGTGGTTTTACGGTCAAAATTTGCTGCTTTTCGAGGTCTTTTCTGGCTTGCATTCTGTCGGAATTCGGAAAATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCGTCCCTTGGGTTGTGGCAAAAGGAGGCCAAGATCCTTTTCTTAGGGCTTGATAATGCTGGAAAGACGACCTTGCTTCATATGTTGAAAGATGAGGTGTGTGATTTTTTTGTTAATTCACTTTTCTTAATCTGTGTACATGATTTAAAATTGATGAAATCCATTCGATGGAGAGATAGCAATGTTCCGCGTCTTGAGACTCGAGAAATTAATTCAATTGATGTATGGATTCATGTTTTAGAAAGCATCTAATAGTTACTTTGCCTTCATTTCTCAACGTTTTCTTAAATCTGATTTTTTGATTAGATTTACTAGAATGTGAGGTTTTGACTTAGCGGCTAATATAAGAGTTGTTGTTGTCATATTGCAGAGATTAGTTCAACACCAGCCGACTCAGCATCCAACTTCCGAAGAGTTGAGCATTGGCAAGATAAAGTTCAAGGCCTTTGACCTTGGAGGACATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTATATTTGATTTGAAAGATCCCACATCATAGCTTTATTTTATTTGAGTTGCCAGTTTCAGTTGACCAAATAAATAATTTTCTGTGGAATCGCGGGTTGAATTTCTTGAGAAATGAAATTTTTGAACTCCTGCAATTTTTGAACTTGAAGTTGTGAAATGTGTTCAAACACTGAACTATTTCATCAGTTCCAAAATGTTTCCATGCCCTCATAATCATAGACAGAGCTTTTTATGTTTTTTCTGCTTTTAGTATTTCATTGTACATTTTTCTTGTTAGTCGAACTGTTTTTCGACTGTAAGATATACTTGCTGAATATTCATACATCATTTACCACATTTGAGACCTCAGGTACTAAGTTACACCATATTCTCTTCTTTGAGAACTGTTTTTCGACTGTAAGATATACTTGCTGAATATTCATACATCATTTACCACATTTGAGACCTCAGGTACTAAGTTACACCATATTCTCTTCTTTGAGAAACACCTTTGCCTCCAAATTCTAGCTACGGGTTTCAACATACGTTGATTTCCTCTACCGTTGCGGTTATTTGAAATTTGAACTTATCATTTCCAAATGTTTTGCTGCCTTCATAATCCCAGACAAACTTTTTTTTGTATTTTTCTGATTCATGGGAGGCAGAAGTTACATGGTTATTTGCTGATAGCATGTCTTCTTGTTGAAAAAGGTCTGCTTATAGTTCATAACCATACATTTTTATCGTAAAATTCCTACCGTTCAAGTGATACTTACTGAAGTTTTCTAACCCATTCATGATTTATCATATTTGTGATTCCATTTTACTCCACTTCTGCCTTCTCTATGGTGTCAACATACGTCAATTTCATCTACGTTTCTGGTTATTTGAACTCTGTACAATCTCTCTGTGTTCAAATATTACCCTGCCTTCATAATCCCGGACTAACCTTCTTGTGTTTTTCTGATTCATGGGAGGCAAAAATCATGTGGTTATTCGCTGATAGCATATCTTCTATGTAAAAGGATCTGCTTTTAGTATATAACCATACATTTCCCTTGTCTTCAAAACTTTTATTAACTTTAAGTAATACCTACTAATATTTAATACGACATTTACGATATTTGAATCTGAAGTGCCACTGTGATACTGTATTGCCTTCTTCAAGGAGGAAGGATTGAAAACTTTGCTTCCAAATGTGTTACCAACTGAGTGTTTTCAAAATGTTACCCTGCCTTCGTAAACCCGGACCAACCTCTTTGTGCTTTTTTGACTCATGGGAGGCAGAAATTATATGGTTATTCACTGATAGCATATCTTCTCCTTGAAAAGTGTCTGCTTTTAGTATATATCCACATATTTTTCTTGTCATCCAAACTATCCTTGGACTATAAAATGTACCTACTGGTATTTTGTAAGACATTTACCATATTTGAAATCCGATGTACTGAATTACCACATTGCCCTCTTCGAGAAAAGACTGAAAGCTTTGATTCCAAATATTAGCAAATTTAATGTACATCCTTTTGTCTAACCCATTGTAGTTATTCAAACACCGAACCCCATCTCAACGATTTCAAGACATATCCCTGCCTTCATAATCCTATACAAACCTTTTTTGTGTTGTATTGCCTTCTTGTAGGAGGAAATTGAAAGTTCTGCGGTTTTAACATACAAGTATGTTAGCCTCTGCGATTTTTTTTCTCTCTAACAATCTCATTGTTTTAAAAATGTTTACCTGCCTTCATAATCCCAGACAAACTTTCTTTTTGTGGTTTTCTGATTCATGGGAGGCAGAAATTTCAATGGTTATTCGCTGATAGCATATCTTCTCACAGAAAGGATATGTTTCTAGTACATAACCACAAATTTTTCTCATCATTAATACCATTCATTAACTATAAGTTGTACCTACTGAAATTTTATATGACAATAACTTCTTTTGAGATCCCAAGTTATTGATTATTATAATGGCTTATAGGAAGGGAAAAAGTTGTTACCTTTGCTTTCTAGTACTACTATGGTTTTAACATGCATGTTGAATTCATCTACCTTTGTGCAACTGTACCTATAATATGTGGCCCTTCACATGTTTCAAAAGCATTTGTCTGCTGACCCTGTCTTATTTAGGACAAGCTCTCTGTTTTGTTGAGCTGTTTAGTTGCTATTACATGATCTTATATGCCGATATGGTTCCTTATTATGTTGTCATTGTTGTGAAGGTGGATGCAGTAGTTTATCTGGTTGATGCATATGACAAGGAGAGATTTGCCGAGTCGAAAAAAGAGTTGGATGCGCTCCTCTCCGATGAAGCATTGGCAGACGTTCCATTCCTGATTCTAGGTAACAAGATTGATATTTCATATGCTGCATCCGAAGACGAGTTACGGTACAACTTGGGGCTAACAAACTTCACGACTGGCAAGGGCAAGGTAACCATGTCTGACTCTAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTGAGAAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAGTAGATTTTATTTTGTTTGTGCTGAGAAACAAATTATTTGTTCAACCTTTACTGTCTCACTGTTCTCTCTGTTGGTATGAATCTATTAGGGGTAAGATTTGTTATTACCTTTTTCATTCCCAATTGAAACTCCCACACCAAAATTTGATTATAAATGCTGTGTAGTGAACTGGCTACTCTATTCTTCATTGCTTCTCTCTTCATCTCGTACCCGAAGGTTATATATTGTGAGTCGTTGTTGTTA ATGCTACCTAAAATGGACTATGGCACAGTTGCTCTGGTTTTGAGGGATTTTAGGGGCTCGATCCGGTGGTTTTACGGTCAAAATTTGCTGCTTTTCGAGGTCTTTTCTGGCTTGCATTCTGTCGGAATTCGGAAAATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCGTCCCTTGGGTTGTGGCAAAAGGAGGCCAAGATCCTTTTCTTAGGGCTTGATAATGCTGGAAAGACGACCTTGCTTCATATGTTGAAAGATGAGAGATTAGTTCAACACCAGCCGACTCAGCATCCAACTTCCGAAGAGTTGAGCATTGGCAAGATAAAGTTCAAGGCCTTTGACCTTGGAGGACATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTGGATGCAGTAGTTTATCTGGTTGATGCATATGACAAGGAGAGATTTGCCGAGTCGAAAAAAGAGTTGGATGCGCTCCTCTCCGATGAAGCATTGGCAGACGTTCCATTCCTGATTCTAGGTAACAAGATTGATATTTCATATGCTGCATCCGAAGACGAGTTACGGTACAACTTGGGGCTAACAAACTTCACGACTGGCAAGGGCAAGGTAACCATGTCTGACTCTAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTGAGAAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAGTAGATTTTATTTTGTTTGTGCTGAGAAACAAATTATTTGTTCAACCTTTACTGTCTCACTGTTCTCTCTGTTGGTATGAATCTATTAGGGGTAAGATTTGTTATTACCTTTTTCATTCCCAATTGAAACTCCCACACCAAAATTTGATTATAAATGCTGTGTAGTGAACTGGCTACTCTATTCTTCATTGCTTCTCTCTTCATCTCGTACCCGAAGGTTATATATTGTGAGTCGTTGTTGTTA ATGCTACCTAAAATGGACTATGGCACAGTTGCTCTGGTTTTGAGGGATTTTAGGGGCTCGATCCGGTGGTTTTACGGTCAAAATTTGCTGCTTTTCGAGGTCTTTTCTGGCTTGCATTCTGTCGGAATTCGGAAAATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCGTCCCTTGGGTTGTGGCAAAAGGAGGCCAAGATCCTTTTCTTAGGGCTTGATAATGCTGGAAAGACGACCTTGCTTCATATGTTGAAAGATGAGAGATTAGTTCAACACCAGCCGACTCAGCATCCAACTTCCGAAGAGTTGAGCATTGGCAAGATAAAGTTCAAGGCCTTTGACCTTGGAGGACATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTGGATGCAGTAGTTTATCTGGTTGATGCATATGACAAGGAGAGATTTGCCGAGTCGAAAAAAGAGTTGGATGCGCTCCTCTCCGATGAAGCATTGGCAGACGTTCCATTCCTGATTCTAGGTAACAAGATTGATATTTCATATGCTGCATCCGAAGACGAGTTACGGTACAACTTGGGGCTAACAAACTTCACGACTGGCAAGGGCAAGGTAACCATGTCTGACTCTAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTGAGAAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG
BLAST of CmoCh12G010460 vs. Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 3.2e-103 Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 1
BLAST of CmoCh12G010460 vs. Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=1 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 9.2e-103 Identity = 182/192 (94.79%), Postives = 187/192 (97.40%), Query Frame = 1
BLAST of CmoCh12G010460 vs. Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 4.6e-102 Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 1
BLAST of CmoCh12G010460 vs. Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 7.3e-100 Identity = 180/194 (92.78%), Postives = 186/194 (95.88%), Query Frame = 1
BLAST of CmoCh12G010460 vs. Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 1.9e-95 Identity = 167/193 (86.53%), Postives = 182/193 (94.30%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TrEMBL
Match: A0A0A0LGJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033920 PE=3 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.7e-103 Identity = 187/193 (96.89%), Postives = 189/193 (97.93%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TrEMBL
Match: A0A067JVH9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18972 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 6.4e-103 Identity = 186/193 (96.37%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TrEMBL
Match: A0A059AXI2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01051 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.9e-102 Identity = 185/193 (95.85%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TrEMBL
Match: A0A0D2MY86_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G144100 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.4e-102 Identity = 185/193 (95.85%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TrEMBL
Match: A0A0B0P0N5_GOSAR (GTP-binding SAR1A-like protein OS=Gossypium arboreum GN=F383_23664 PE=3 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 5.5e-102 Identity = 184/193 (95.34%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TAIR10
Match: AT4G02080.1 (AT4G02080.1 secretion-associated RAS super family 2) HSP 1 Score: 375.9 bits (964), Expect = 1.8e-104 Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TAIR10
Match: AT1G56330.1 (AT1G56330.1 secretion-associated RAS 1B) HSP 1 Score: 374.4 bits (960), Expect = 5.2e-104 Identity = 182/192 (94.79%), Postives = 187/192 (97.40%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TAIR10
Match: AT3G62560.1 (AT3G62560.1 Ras-related small GTP-binding family protein) HSP 1 Score: 370.2 bits (949), Expect = 9.8e-103 Identity = 179/192 (93.23%), Postives = 189/192 (98.44%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TAIR10
Match: AT1G09180.1 (AT1G09180.1 secretion-associated RAS super family 1) HSP 1 Score: 350.9 bits (899), Expect = 6.2e-97 Identity = 172/193 (89.12%), Postives = 181/193 (93.78%), Query Frame = 1
BLAST of CmoCh12G010460 vs. TAIR10
Match: AT1G02620.1 (AT1G02620.1 Ras-related small GTP-binding family protein) HSP 1 Score: 198.0 bits (502), Expect = 6.7e-51 Identity = 94/111 (84.68%), Postives = 108/111 (97.30%), Query Frame = 1
BLAST of CmoCh12G010460 vs. NCBI nr
Match: gi|659070157|ref|XP_008453690.1| (PREDICTED: GTP-binding protein SAR1A [Cucumis melo]) HSP 1 Score: 384.8 bits (987), Expect = 1.1e-103 Identity = 188/193 (97.41%), Postives = 189/193 (97.93%), Query Frame = 1
BLAST of CmoCh12G010460 vs. NCBI nr
Match: gi|449454032|ref|XP_004144760.1| (PREDICTED: GTP-binding protein SAR1A [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 2.4e-103 Identity = 187/193 (96.89%), Postives = 189/193 (97.93%), Query Frame = 1
BLAST of CmoCh12G010460 vs. NCBI nr
Match: gi|802703285|ref|XP_012084040.1| (PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]) HSP 1 Score: 381.7 bits (979), Expect = 9.2e-103 Identity = 186/193 (96.37%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh12G010460 vs. NCBI nr
Match: gi|702435386|ref|XP_010069865.1| (PREDICTED: GTP-binding protein SAR1A-like [Eucalyptus grandis]) HSP 1 Score: 380.2 bits (975), Expect = 2.7e-102 Identity = 185/193 (95.85%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh12G010460 vs. NCBI nr
Match: gi|823150310|ref|XP_012474982.1| (PREDICTED: GTP-binding protein SAR1A-like [Gossypium raimondii]) HSP 1 Score: 379.8 bits (974), Expect = 3.5e-102 Identity = 185/193 (95.85%), Postives = 191/193 (98.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|