CmoCh12G008140 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAATCGTCTGCGACATATCCGACTTGCCTCTACGCTAGGCCAAGTCATTCGGCTCGTCCTTGGCTCTGCTCAGGCCAAGGTCTCTCAATACAACGTTGCATCTCATCTTGCCATCTTGATCCCCATCGACAGGGTCCATATGTCTTGACACCATCCCGAGTCTCGGAATGTCGTCGGCCATCATAACTCACCAGGATTTTTAAAGTCTTGAGGGGAAACCCTTTATAATGGTGTTGAAACCTTCCCTCTTCCCCTAGTTAAAGGATGTGTTAACCTTCCCCTTTCCCCTAGCAGGTTTGCCTTGAGGGGAAGCTCAAAGAGGACCATATTTACTAGTGTTGGGCTTGGGCCGTTACAACCTTCGAAGCTCACACTTCTTTGTTTGACATGGATAAGTTAAGGGCATGACTCTGATACCATGTTTTGAATCACGAATCTACACAATGGTATGATATTGGCTCTGATACCATGTTATGAATCACAAACCTACACAATGGTATGATATTGGCTCTGATATCATGTTATGAATCACAATCCTACACAATGGTATGAGGGCCATTACAACCTTCGAAGCTCACACTTCTTTGTTCGACATGTATAAGTTAAGGACATGATTTTGATACCATGTTATGAATCACGAACCTCCACATTGGTATGATATGAGTTCTCATGGCTTTGTTTTGGGTTTTACCAAAAAGCTTCTTACAAATATAGATGTATTTTTTACTTATAAATCTATGATCATTCTCTTCTATGTGGGACTTGCTCCCAATAATTCTCATCATAGCTTAATTTGTTCAAGTGTATAGCGAGATAGTAATGCCCATTGGGATTAGTGGCAAAGAAGACTCGATGTTCCCAACAGAACCTTTTGATTTCAACAAATTTAAGAAGGATTGCAAGGCTTTGTATGGGGTTTCACCAAATCGTCATTGGATCACAACTTTCTAGGGAGGCCAAGTAACCCTCAACTAATCTAAGTTTCACATCTTTTTATCATAAATTAATAAAAATACTCTTAAATTACTAAAATAAAAATTAAACTTTACAATAACATCCCTCCTACAAAATTAAAAAAAAAAAAAATACTCTTTTAACTTTTAAAAGTTTCTTCTTCACACTAACTCTAAAGAGTATTTTTAAAAGTTCAAGGGTATTTTTATTAATTTAACCAGAAACAATTTGTATTTTTAAAAGGAAGGGTATTTTTATTAATTTAACCAGAAACAATTTGGTAAATTGTGCAGGACCTGAAATTAATACTCCATCGGTTTGGAAGTAACATTATTTTTTCTAATGGCCTCAAAGATCCTTACAGCAGTGGAGGGTAAGAACAATATCTAAGCTACTTAATTGGTACCACCTTCAAAGCTTCAAATTATTAATGGTATGGCGTTTGGATCGCAGGGTATTGCATAATATATCTGAGAGCATTATTGCTATCCCCACGGCTGAAGGTAATGCTTTCATCATAATTTGATTAATTATTTTACATTTCATACCGTTTCTAAATGCTAAAATTATGATTATTGCAGGCTCCCATTGCTTAGACTTAGAAGAAGGGAGGGAGGATGATCCTGAATGGTTGACAAGCCAAAGGAAGGCCGAAATGGATATAATTGATGCTTGGATCTCGAAGTATTATGTCGATCTCTTGCAATCCAACCAAACTCTCGATGCCCATTGA ATGTTCAATCGTCTGCGACATATCCGACTTGCCTCTACGCTAGGCCAAGTCATTCGGCTCGTCCTTGGCTCTGCTCAGGCCAAGGTCTCTCAATACAACGTTGCATCTCATCTTGCCATCTTGATCCCCATCGACAGGGACCTGAAATTAATACTCCATCGGTTTGGAAGTAACATTATTTTTTCTAATGGCCTCAAAGATCCTTACAGCAGTGGAGGGGTATTGCATAATATATCTGAGAGCATTATTGCTATCCCCACGGCTGAAGGCTCCCATTGCTTAGACTTAGAAGAAGGGAGGGAGGATGATCCTGAATGGTTGACAAGCCAAAGGAAGGCCGAAATGGATATAATTGATGCTTGGATCTCGAAGTATTATGTCGATCTCTTGCAATCCAACCAAACTCTCGATGCCCATTGA ATGTTCAATCGTCTGCGACATATCCGACTTGCCTCTACGCTAGGCCAAGTCATTCGGCTCGTCCTTGGCTCTGCTCAGGCCAAGGTCTCTCAATACAACGTTGCATCTCATCTTGCCATCTTGATCCCCATCGACAGGGACCTGAAATTAATACTCCATCGGTTTGGAAGTAACATTATTTTTTCTAATGGCCTCAAAGATCCTTACAGCAGTGGAGGGGTATTGCATAATATATCTGAGAGCATTATTGCTATCCCCACGGCTGAAGGCTCCCATTGCTTAGACTTAGAAGAAGGGAGGGAGGATGATCCTGAATGGTTGACAAGCCAAAGGAAGGCCGAAATGGATATAATTGATGCTTGGATCTCGAAGTATTATGTCGATCTCTTGCAATCCAACCAAACTCTCGATGCCCATTGA
BLAST of CmoCh12G008140 vs. Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3) HSP 1 Score: 66.2 bits (160), Expect = 3.1e-10 Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
BLAST of CmoCh12G008140 vs. Swiss-Prot
Match: DPP2_RAT (Dipeptidyl peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 1
BLAST of CmoCh12G008140 vs. Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09 Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of CmoCh12G008140 vs. Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl peptidase 2 OS=Mus musculus GN=Dpp7 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
BLAST of CmoCh12G008140 vs. Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=1 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-08 Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TrEMBL
Match: U5GQR1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s221001g PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.3e-28 Identity = 59/85 (69.41%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TrEMBL
Match: A0A067L9L8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05400 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 4.0e-28 Identity = 59/86 (68.60%), Postives = 71/86 (82.56%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TrEMBL
Match: B9SCN5_RICCO (Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476320 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-27 Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TrEMBL
Match: A0A061GVX8_THECC (Serine carboxypeptidase S28 family protein OS=Theobroma cacao GN=TCM_046934 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.5e-27 Identity = 57/85 (67.06%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TrEMBL
Match: A0A061GWT8_THECC (Serine carboxypeptidase S28 family protein OS=Theobroma cacao GN=TCM_046935 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.6e-27 Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TAIR10
Match: AT5G22860.1 (AT5G22860.1 Serine carboxypeptidase S28 family protein) HSP 1 Score: 112.5 bits (280), Expect = 2.2e-25 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TAIR10
Match: AT2G24280.1 (AT2G24280.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 105.9 bits (263), Expect = 2.0e-23 Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CmoCh12G008140 vs. TAIR10
Match: AT5G65760.1 (AT5G65760.1 Serine carboxypeptidase S28 family protein) HSP 1 Score: 94.7 bits (234), Expect = 4.7e-20 Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CmoCh12G008140 vs. NCBI nr
Match: gi|659072238|ref|XP_008464256.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cucumis melo]) HSP 1 Score: 140.2 bits (352), Expect = 2.7e-30 Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 1
BLAST of CmoCh12G008140 vs. NCBI nr
Match: gi|566150304|ref|XP_006369374.1| (hypothetical protein POPTR_0001s221001g, partial [Populus trichocarpa]) HSP 1 Score: 133.3 bits (334), Expect = 3.3e-28 Identity = 59/85 (69.41%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of CmoCh12G008140 vs. NCBI nr
Match: gi|643737945|gb|KDP43933.1| (hypothetical protein JCGZ_05400 [Jatropha curcas]) HSP 1 Score: 132.5 bits (332), Expect = 5.7e-28 Identity = 59/86 (68.60%), Postives = 71/86 (82.56%), Query Frame = 1
BLAST of CmoCh12G008140 vs. NCBI nr
Match: gi|802551170|ref|XP_012064654.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like [Jatropha curcas]) HSP 1 Score: 132.5 bits (332), Expect = 5.7e-28 Identity = 59/86 (68.60%), Postives = 71/86 (82.56%), Query Frame = 1
BLAST of CmoCh12G008140 vs. NCBI nr
Match: gi|743922690|ref|XP_011005419.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like [Populus euphratica]) HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27 Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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