CmoCh12G004760 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTCTCCAATCTCCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAAAGACGGTGATGGCATGCTCAATAATCAAGAGTTACAATTCTTTTTCCGTGATGTTCGAGGATCAACTCAACTCAACAATCGAGAAATTTTATCTAAGATCCCAAAGACAAACGACAACGCTGCACACATGTTAAGCTCAAATGCTCATTCAAACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCTCGACAAAAGTCCTTAGTGAAAAGGCATCTCATGTGCCACTTAGTAGAGAGCAAATAAAGAAAATTTTCAAATATTACAACAGCGACAAAGATGGTTTTCTCAACAAAAGAGAGGTAACAAAAGCTTTTAGTTTTCTAGGCTCAATTAATCCATATTACAGGGCTCAATACGCTTTGGATTTTGCTGACGATAATAATGATGGTCTTATCAGTGAAGATGAGCTTGACAAACTCATAGATTATGTCAGTAAAATCATCAAGAAGAAATGA ATGTCTGTCTCCAATCTCCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAAAGACGGTGATGGCATGCTCAATAATCAAGAGTTACAATTCTTTTTCCGTGATGTTCGAGGATCAACTCAACTCAACAATCGAGAAATTTTATCTAAGATCCCAAAGACAAACGACAACGCTGCACACATGTTAAGCTCAAATGCTCATTCAAACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCTCGACAAAAGTCCTTAGTGAAAAGGCATCTCATGTGCCACTTAGTAGAGAGCAAATAAAGAAAATTTTCAAATATTACAACAGCGACAAAGATGGCTCAATTAATCCATATTACAGGGCTCAATACGCTTTGGATTTTGCTGACGATAATAATGATGGTCTTATCAGTGAAGATGAGCTTGACAAACTCATAGATTATGTCAGTAAAATCATCAAGAAGAAATGA ATGTCTGTCTCCAATCTCCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAAAGACGGTGATGGCATGCTCAATAATCAAGAGTTACAATTCTTTTTCCGTGATGTTCGAGGATCAACTCAACTCAACAATCGAGAAATTTTATCTAAGATCCCAAAGACAAACGACAACGCTGCACACATGTTAAGCTCAAATGCTCATTCAAACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCTCGACAAAAGTCCTTAGTGAAAAGGCATCTCATGTGCCACTTAGTAGAGAGCAAATAAAGAAAATTTTCAAATATTACAACAGCGACAAAGATGGCTCAATTAATCCATATTACAGGGCTCAATACGCTTTGGATTTTGCTGACGATAATAATGATGGTCTTATCAGTGAAGATGAGCTTGACAAACTCATAGATTATGTCAGTAAAATCATCAAGAAGAAATGA
BLAST of CmoCh12G004760 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38 Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 1
BLAST of CmoCh12G004760 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26 Identity = 80/177 (45.20%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CmoCh12G004760 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26 Identity = 82/176 (46.59%), Postives = 108/176 (61.36%), Query Frame = 1
BLAST of CmoCh12G004760 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.6e-18 Identity = 68/180 (37.78%), Postives = 108/180 (60.00%), Query Frame = 1
BLAST of CmoCh12G004760 vs. TrEMBL
Match: A0A0A0LRC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.6e-07 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
BLAST of CmoCh12G004760 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38 Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 1
BLAST of CmoCh12G004760 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]) HSP 1 Score: 137.5 bits (345), Expect = 2.0e-29 Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CmoCh12G004760 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus]) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26 Identity = 80/177 (45.20%), Postives = 114/177 (64.41%), Query Frame = 1
BLAST of CmoCh12G004760 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26 Identity = 82/176 (46.59%), Postives = 108/176 (61.36%), Query Frame = 1
BLAST of CmoCh12G004760 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17 Identity = 68/180 (37.78%), Postives = 108/180 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |