CmoCh12G003750 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGTTTTGGTTTTCCTAATCGATTATTCCAGATAACGTGGAGAGATTTTATAGAATCGAAGAGAAGAAAGGTCAGTATCTGAAGAGAAAGCTAAAGCACAGTGAGAAGAAGAAGAAAAGAAAAAAGAATCTTCAGATCTGATCTAATCGGAGATCCTCCTCTTTGTTCCAACCGGAAAAAATGTCGTCAGCCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTAAGAAAATTTTCATTCAATTCGATTGATTACATGTCTCTTGTAACGGATCTTGATTGGCTTTTGTTCTTGTGAATTAGGTATGGGAGCCGCTTATGGGACCGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGTACTTTTCTTTAATCCGTTACTCTGAAATGTAGATTTAGATGTATTGTGGATGCTTCAATCTGGCTTGATCTCGTTTTTTGTGGTTTATTAACTTATCTTTTCAATTTGCTTCTGCTAATTTTCAACTTCGGTGAAAGTACTTTGATTGAAGATTTTGTTATCAGAGTCTATGTCACCATGATCAAATAATGGAATAAGATTGTTCTTGGGAAGGATTGCCTTTGTTGAGAATGAATTTAGCAATCAAGTTCAGTCTGATCTCAATTTAGGTTTAAGCTCAAAGCTCTGGATTCTTGCCTTTTGTGTTAAATTCGTTCTAGACTATTTCCTGCCTTAGTTCACTATTAATAGTCTAATGCTTCAAACCCTGAAAAGATTGATGGTATCACTATTGTTCTTGATCCCTTGATGTTTGCACATACCCTTTGCAAATCGAGCAATGTTTTTGTAACAATCCAAACCTACCGCTAACTGATATTATCCGCTTTGGCTCGTTACGATTGTCGTCAGCCTCATGATTTTTAAACACCTCAGTTGGATAGAGTTTTCATACCCTTATAAGGAATGTTTCGTTCTTCTCTCCCACCAATGTGGGATCTCACAGAATCATTCTTTATAAGAAAGGGTGTGGAAACCTCTCCCTGACAGACGGGTTTTAAAAATCTTGAGGGAAAGCTCGAAAGGGAAAGTCCAAAGAGGACAATATCGGCTAGTGGTGAGCTTGGGCTGTTACAAAAATGCTTTTAACGTAGAATGGAAGCATCTAATTGTATATGTCTTCTGCAGGGCCAATGCACAACAGCCTAAGCTTTTTGTTGGGATGATTCTCATTCTAATTTTCGCCGAAGCGCTTGCCCTTTATGGACTTATTGTCGGTATTATTCTCTCGTCCCGAGCTGGTCAGTCGAGAGCTGATTAATTGAACGTTTTGCGCTTTGAAAATGTGTATTATGTCTCTTTTTTCCTTCAAGATTTGTTTTTGTAGTTCTCTGATTAGAAATGGTCATAACTCAGTTTACTTTCTCAAATATTCGTATGTTGTTGTGTGGTTTTCTACCACACGGATGCTGTACTCATAAGGATTTGGAATTTATTATTCTTCTCAATAAACATAAAACCTTATTTCCTTGGCTGCTTATTGTGCTC GGGTTTTGGTTTTCCTAATCGATTATTCCAGATAACGTGGAGAGATTTTATAGAATCGAAGAGAAGAAAGGTCAGTATCTGAAGAGAAAGCTAAAGCACAGTGAGAAGAAGAAGAAAAGAAAAAAGAATCTTCAGATCTGATCTAATCGGAGATCCTCCTCTTTGTTCCAACCGGAAAAAATGTCGTCAGCCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCCGCTTATGGGACCGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGGCCAATGCACAACAGCCTAAGCTTTTTGTTGGGATGATTCTCATTCTAATTTTCGCCGAAGCGCTTGCCCTTTATGGACTTATTGTCGGTATTATTCTCTCGTCCCGAGCTGGTCAGTCGAGAGCTGATTAATTGAACGTTTTGCGCTTTGAAAATGTGTATTATGTCTCTTTTTTCCTTCAAGATTTGTTTTTGTAGTTCTCTGATTAGAAATGGTCATAACTCAGTTTACTTTCTCAAATATTCGTATGTTGTTGTGTGGTTTTCTACCACACGGATGCTGTACTCATAAGGATTTGGAATTTATTATTCTTCTCAATAAACATAAAACCTTATTTCCTTGGCTGCTTATTGTGCTC ATGTCGTCAGCCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCCGCTTATGGGACCGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGGCCAATGCACAACAGCCTAAGCTTTTTGTTGGGATGATTCTCATTCTAATTTTCGCCGAAGCGCTTGCCCTTTATGGACTTATTGTCGGTATTATTCTCTCGTCCCGAGCTGGTCAGTCGAGAGCTGATTAA
BLAST of CmoCh12G003750 vs. Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 7.6e-80 Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.2e-79 Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 3.8e-79 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 3.8e-79 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase subunit c2 OS=Arabidopsis thaliana GN=VHA-c2 PE=2 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 4.9e-79 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TrEMBL
Match: A0A067FUW1_CITSI (V-type proton ATPase proteolipid subunit OS=Citrus sinensis GN=CISIN_1g031129mg PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 2.9e-78 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TrEMBL
Match: A0A0A0LLK8_CUCSA (V-type proton ATPase proteolipid subunit OS=Cucumis sativus GN=Csa_2G365650 PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 2.9e-78 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TrEMBL
Match: Q9SXS6_CITUN (V-type proton ATPase proteolipid subunit OS=Citrus unshiu GN=CitVATP c-1 PE=2 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 2.9e-78 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TrEMBL
Match: A0A067DIU8_CITSI (V-type proton ATPase proteolipid subunit OS=Citrus sinensis GN=CISIN_1g031125mg PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 6.5e-78 Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TrEMBL
Match: A0A164V5L8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022793 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 6.5e-78 Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TAIR10
Match: AT1G19910.1 (AT1G19910.1 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 295.0 bits (754), Expect = 2.8e-80 Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TAIR10
Match: AT2G16510.1 (AT2G16510.1 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 292.7 bits (748), Expect = 1.4e-79 Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TAIR10
Match: AT4G38920.1 (AT4G38920.1 vacuolar-type H(+)-ATPase C3) HSP 1 Score: 292.7 bits (748), Expect = 1.4e-79 Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TAIR10
Match: AT4G34720.1 (AT4G34720.1 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 292.7 bits (748), Expect = 1.4e-79 Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. TAIR10
Match: AT1G75630.2 (AT1G75630.2 vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4) HSP 1 Score: 258.5 bits (659), Expect = 2.9e-69 Identity = 154/198 (77.78%), Postives = 159/198 (80.30%), Query Frame = 1
BLAST of CmoCh12G003750 vs. NCBI nr
Match: gi|449469913|ref|XP_004152663.1| (PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 4.2e-78 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. NCBI nr
Match: gi|568867894|ref|XP_006487263.1| (PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Citrus sinensis]) HSP 1 Score: 298.1 bits (762), Expect = 9.3e-78 Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. NCBI nr
Match: gi|1021031936|gb|KZM89720.1| (hypothetical protein DCAR_022917 [Daucus carota subsp. sativus]) HSP 1 Score: 298.1 bits (762), Expect = 9.3e-78 Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of CmoCh12G003750 vs. NCBI nr
Match: gi|659088047|ref|XP_008444773.1| (PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis melo]) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77 Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of CmoCh12G003750 vs. NCBI nr
Match: gi|449432418|ref|XP_004133996.1| (PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77 Identity = 164/165 (99.39%), Postives = 165/165 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |