CmoCh12G003580 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G003580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr12 : 2224813 .. 2226358 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTTCTTCAACCAAACACTCACACGCTCTCCTTTCGTCATGTTCTTCCTTCTATAAAATCCTCATACTCTCCTTCTTCTTCCTTTCTTCTTCAACCTTCCATGGAATTTTCCTTGCCCTAAGCCTCCCAACTTCGCTCCCATGGCGGCGACTCCTCATTGCGCCTCTCTCGATTTCGCCTTCTCTCCTAAAGAACACGAAGTCGCTCAAATCCTCCTCGAATTCTCGAAGAAATCCGTCGTTTATCTCGGATTTATCCCCGTCTGGACACTCCGACGCAAGAGATCCGCCTTAGTTTCCCCGCCGGAATCCTCCGCCTCCGTCCCTTCGCCGCCGTCCAAGAAGGTCAAGGAGTCCAGCCCTACCTCTCCTCTCGTCCTCAACTCCTTGCCGTTGTCGCGAAGTGAATCCGATGAACATACCAACGCTAAACACTCCAAGAAGAAGCCCTCTCTCGATAAGGTCTCTATTGCATTACCGATTGATTACTCTTCTTTTACATTTGATTTTCTTGTTTAGACCTAATTTTAGTGATTTCTGTTCGTTGTTTGTGTTCTCTGGCTCTGATTTTGTCTGTTGAGTTCTTATCGATGTTTTTGGATCTTGGATTCAGAAATCTCAGTTTGTGGAAGCCATTGACGAATTGACCAAGCAGAATCAAGGTTTGAAAGGGGTGAGTTTTATCATTTATTTTATTTGTTTTAATTTTTCTTTTTACCTTTTCTGGGCGCTGCAAAATTCGTTTGTCCTTTTCCTATATTTTCCCCCCTACTTTTCATACCCTCACAAATATTATCTTCTTCTTCTTCTTCTCTTTATTTATTTAATTTTCCATTAAAACAGGAATTTGAAGCTATGAAGCAACATTATAATCATCTGAAAGCTATCAATTCGGAATTGAAGGCCAAAAAGCAAGAGGTTCTTAATTTTTCTACTTGGAGCTCTGCAGTCCCCAATTTCATTATCTTATTTTCTGTGGGCTCTGTTTTTGAATCAAAATCTTACTGTTCTTCTTCTTGTCCAGATGATTCTCGGTTCTAACAGCTCTAAGAACGAATCAGCAATTCCAGAAATAGGAACCTCAAGTTCGGCCATGGAAGTCGTTAAGCTGCTCACAGTCGAATCCTCAACTCATCAGCCAGATCCCATGGCGGAACAGAGTAATAATGGCAGTCAGAATTTTCAAATCCCGATTGGGGGAATTCCTTTCTATGATCCTTCTTCATTGAGCCCAATGGGGATTCCTGATTTGAACATCTCTCTTGAAGAAATCAACCAGAGGAATTACTCCAGATTCATGGCGGCTCGAGCAAGAAAGAACAGGATTCAGATCTGCAAGAATAAGAACAACGGCGTTACCAAATTGCAGACTCCTCCAAACAATCCCTGTATGTGATCTCAGAGTTCAACAAATTCCACATTTTCACATTCTTTTTTGATCTTAGGATTTTGTTCATCAATTTGTTTGATTTGATGATGCAGAGGGCCTATTTTGATTGTGGAATTGGGTTAGATTAATATTTTTTTTTTGTTTGTAGATTTTTGA

mRNA sequence

GTCTTCTTCAACCAAACACTCACACGCTCTCCTTTCGTCATGTTCTTCCTTCTATAAAATCCTCATACTCTCCTTCTTCTTCCTTTCTTCTTCAACCTTCCATGGAATTTTCCTTGCCCTAAGCCTCCCAACTTCGCTCCCATGGCGGCGACTCCTCATTGCGCCTCTCTCGATTTCGCCTTCTCTCCTAAAGAACACGAAGTCGCTCAAATCCTCCTCGAATTCTCGAAGAAATCCGTCGTTTATCTCGGATTTATCCCCGTCTGGACACTCCGACGCAAGAGATCCGCCTTAGTTTCCCCGCCGGAATCCTCCGCCTCCGTCCCTTCGCCGCCGTCCAAGAAGGTCAAGGAGTCCAGCCCTACCTCTCCTCTCGTCCTCAACTCCTTGCCGTTGTCGCGAAGTGAATCCGATGAACATACCAACGCTAAACACTCCAAGAAGAAGCCCTCTCTCGATAAGAAATCTCAGTTTGTGGAAGCCATTGACGAATTGACCAAGCAGAATCAAGGTTTGAAAGGGGAATTTGAAGCTATGAAGCAACATTATAATCATCTGAAAGCTATCAATTCGGAATTGAAGGCCAAAAAGCAAGAGATGATTCTCGGTTCTAACAGCTCTAAGAACGAATCAGCAATTCCAGAAATAGGAACCTCAAGTTCGGCCATGGAAGTCGTTAAGCTGCTCACAGTCGAATCCTCAACTCATCAGCCAGATCCCATGGCGGAACAGAGTAATAATGGCAGTCAGAATTTTCAAATCCCGATTGGGGGAATTCCTTTCTATGATCCTTCTTCATTGAGCCCAATGGGGATTCCTGATTTGAACATCTCTCTTGAAGAAATCAACCAGAGGAATTACTCCAGATTCATGGCGGCTCGAGCAAGAAAGAACAGGATTCAGATCTGCAAGAATAAGAACAACGGCGTTACCAAATTGCAGACTCCTCCAAACAATCCCTATTTTTGA

Coding sequence (CDS)

ATGGCGGCGACTCCTCATTGCGCCTCTCTCGATTTCGCCTTCTCTCCTAAAGAACACGAAGTCGCTCAAATCCTCCTCGAATTCTCGAAGAAATCCGTCGTTTATCTCGGATTTATCCCCGTCTGGACACTCCGACGCAAGAGATCCGCCTTAGTTTCCCCGCCGGAATCCTCCGCCTCCGTCCCTTCGCCGCCGTCCAAGAAGGTCAAGGAGTCCAGCCCTACCTCTCCTCTCGTCCTCAACTCCTTGCCGTTGTCGCGAAGTGAATCCGATGAACATACCAACGCTAAACACTCCAAGAAGAAGCCCTCTCTCGATAAGAAATCTCAGTTTGTGGAAGCCATTGACGAATTGACCAAGCAGAATCAAGGTTTGAAAGGGGAATTTGAAGCTATGAAGCAACATTATAATCATCTGAAAGCTATCAATTCGGAATTGAAGGCCAAAAAGCAAGAGATGATTCTCGGTTCTAACAGCTCTAAGAACGAATCAGCAATTCCAGAAATAGGAACCTCAAGTTCGGCCATGGAAGTCGTTAAGCTGCTCACAGTCGAATCCTCAACTCATCAGCCAGATCCCATGGCGGAACAGAGTAATAATGGCAGTCAGAATTTTCAAATCCCGATTGGGGGAATTCCTTTCTATGATCCTTCTTCATTGAGCCCAATGGGGATTCCTGATTTGAACATCTCTCTTGAAGAAATCAACCAGAGGAATTACTCCAGATTCATGGCGGCTCGAGCAAGAAAGAACAGGATTCAGATCTGCAAGAATAAGAACAACGGCGTTACCAAATTGCAGACTCCTCCAAACAATCCCTATTTTTGA
Homology
[Close]
BLAST of CmoCh12G003580 vs. TrEMBL
Match: A0A0A0LRP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368820 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.1e-60
Identity = 160/303 (52.81%), Postives = 209/303 (68.98%), Query Frame = 1 

Query: 3   ATPHCASLDFA---FSPKEHEVAQILLEFS---KKSVVYLGFIPVWTLRRKRSALVSPPE 62
           ++ H  S+ F    FSP+EH VAQIL +     ++S   LG  P W +RRKRSA+ SPP+
Sbjct: 5   SSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPD 64

Query: 63  SSASVPSPP---------SKKVKESSPTSPLVLNSLPLSRSESDEHTN-AKHSKKKPSLD 122
           +S+ +  PP         S++ KESSPT+PL L+SLPLSRSESDE+T  AK SKKK  +D
Sbjct: 65  TSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVD 124

Query: 123 KKSQFVEAIDELTKQNQGLKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAI 182
           KKSQ++E I++LT Q Q L+G+ EAMK+H+ +LK INSELKAKKQE++ G +   N S  
Sbjct: 125 KKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFS---NLSVN 184

Query: 183 PEIGTSSS-AMEVVKLLTVESST---------------HQPDPMAEQSNNGSQNFQIPIG 242
           P+ GTS+S AME+ KL TV+SS                +Q  P+AEQSN+  QN+QIPIG
Sbjct: 185 PKFGTSTSVAMEIAKL-TVKSSDSNVENNHDECEPSMKNQTVPVAEQSNS-IQNYQIPIG 244

Query: 243 GIPFYDPSSLSPMGIPDLNISLEEINQRNYSRFMAARARKNRIQICKNK-----NNGVTK 269
           GIP YDPS L PMGIPDLN+SLE+I  +NY++++AA+AR+NRIQI KNK     NNG  K
Sbjct: 245 GIPLYDPS-LGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPK 301

[Close]
BLAST of CmoCh12G003580 vs. TrEMBL
Match: A0A0A0LL74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368810 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.4e-45
Identity = 133/269 (49.44%), Postives = 170/269 (63.20%), Query Frame = 1 

Query: 14  FSPKEHEVAQILLEFS---KKSVVYLGFIPVWTLRRKRSALVSPPESSASVPSPP----- 73
           F+P++H+VA IL E     +KS   LG  P W +RRKRSA+VSP   S  V  PP     
Sbjct: 16  FTPEDHKVADILKELPLLIQKSEFSLGLPPSWPIRRKRSAVVSPLGCSTVVAQPPPPPSS 75

Query: 74  SKKVKESSPTSPLVLNSLPLSRSESDEH-TNAKHSKKKPSLDKKSQFVEAIDELTKQNQG 133
           S++ KE+SPT+PL L+SL LSRSESDE+  N K SK+K  L KK +  E++D+LT QNQ 
Sbjct: 76  SEEDKETSPTTPLSLDSLTLSRSESDENIANVKVSKRKAPLAKKFKCAESVDKLTHQNQA 135

Query: 134 LKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTV 193
           L   FEA KQ + H K INSELKAKKQE  +    S N S IPE GTS+S  +    L +
Sbjct: 136 LGENFEAKKQRFAHPKTINSELKAKKQEASMILGGSTNRSEIPENGTSTSGTKSSD-LNM 195

Query: 194 ESSTH--------QPDPMAEQSNNGSQNFQIPIGGIPFYDPSSLSPMGIPDLNISLEEIN 253
           E++ H        Q  PMAEQSN+ +QN QIPI  IP  D      MGIPDLN+++E+  
Sbjct: 196 ENNLHECEPSTKNQTAPMAEQSND-NQNHQIPIDEIPLLD-----LMGIPDLNLTVEQNC 255

Query: 254 QRNYSRFMAARARKNRIQICKNKNNGVTK 266
           + NY + +AA+AR+NR +ICKNK N   K
Sbjct: 256 RVNYKKQLAAKARQNRARICKNKRNKKNK 277

[Close]
BLAST of CmoCh12G003580 vs. TrEMBL
Match: W9RWQ6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016056 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-16
Identity = 106/303 (34.98%), Postives = 153/303 (50.50%), Query Frame = 1 

Query: 14  FSPKEHEVAQILLEFSKKSVVYLGFIPV----WTLRRKRSALVS-----------PPESS 73
           F+  E EVA ILLE  +K      F P+    W  +++RS   S           PPE S
Sbjct: 15  FADDEFEVAGILLEL-RKLFTATEFFPLFRVEWGSKKRRSTTYSNNQASPATVPPPPEPS 74

Query: 74  ASVPSPP-----SKKVKESSPTSPLVLNSLPLSRSESDEHTNAKHSKKKPSLDKKSQFVE 133
           +S P  P     + K K SSP +PL       S SESDE    K SK+K  L K++ ++E
Sbjct: 75  SSPPEDPVDERCTGKNKASSPATPL-----SFSPSESDE--KRKPSKRK--LLKRADWLE 134

Query: 134 AIDELTKQNQGLKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTS- 193
            I ELT++   LK E E + ++++ LKA NSELKA+K+E+I  +   K E  + +IG S 
Sbjct: 135 LIKELTERKDMLKKEVENVSRYFDKLKAFNSELKARKEELI--TRGLKKEIRLSKIGQSV 194

Query: 194 SSAMEV--VKLLTVESSTHQPDPMAE---QSNNGSQNFQ-----IPIGGIPFYDPSS--L 253
           +  ME+      T     H P  + +   Q+   S+N Q     IP  G    + S+  +
Sbjct: 195 NHEMELGQPNASTPFPEFHHPPLIMDRTVQATGISENLQFSASHIPSSGFSRNNNSNNIV 254

Query: 254 SPMGIPDLNISLEE-------------INQRNYSRFMAARARKNRIQICKNKNN-GVTKL 270
           SP+G+PDLN+S EE             +  +N SR MA+ AR+ R QIC++K +    KL
Sbjct: 255 SPLGLPDLNVSPEEPFGMDFSQPFDLAMADKNRSRAMASEARRRRRQICRDKTSVAANKL 305

[Close]
BLAST of CmoCh12G003580 vs. TrEMBL
Match: V7AR00_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G017200g PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12
Identity = 81/272 (29.78%), Postives = 129/272 (47.43%), Query Frame = 1 

Query: 15  SPKEHEVAQILLEFSKKSVVY---LGFIPV-WTLRRKRSAL-VSPPESSASVPSPPSKKV 74
           S +E++VA+IL++     + +    G +P  W  ++KRSA+ V+P    AS P+ P    
Sbjct: 13  SMRENQVAEILVKLPTLILEFECGRGILPQSWGRKKKRSAISVNPKAEEASSPATP---- 72

Query: 75  KESSPTSPLVLNSLPLSRSESDEHTNAKHSKKKPSLDKKSQFVEAIDELTKQNQGLKGEF 134
                        L  S SESDE+  +   +      K+  F++ I +LTK N  L GE 
Sbjct: 73  -------------LSFSPSESDENPTSLFRRNVSLKRKREHFLKIIQDLTKDNDLLSGEI 132

Query: 135 EAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTVESSTH 194
           + +K ++  LK  N +LKAKKQE+  G ++          G      + ++   V    H
Sbjct: 133 KNVKCYFEKLKDYNLKLKAKKQELSHGPSTQ---------GDIVHKQQQLQFPGV--PPH 192

Query: 195 QPDPMAEQSNNGSQNFQIPIGGIPFYDPSSLSPMGIPDLNISLEE--------------- 254
            P  +  Q+   +        G+P    + + P+GIPDLN+ LEE               
Sbjct: 193 HPTVILNQT--AAFGLATTSLGVPLLSSNDVGPIGIPDLNLPLEESMSVEFCEPLDVNVS 252

Query: 255 INQRNYSRFMAARARKNRIQICKNKNN-GVTK 266
           +  RN SR MAA+AR+NR+ I + KN+ G++K
Sbjct: 253 VANRNLSRAMAAQARQNRLHIYRFKNSIGISK 254

[Close]
BLAST of CmoCh12G003580 vs. TrEMBL
Match: G7I779_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_1g025290 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-10
Identity = 85/301 (28.24%), Postives = 133/301 (44.19%), Query Frame = 1 

Query: 14  FSPKEHEVAQILLEFSKKSVVYLGFIPVWTLRRKRSALVSPPESSASV----PSPPSKKV 73
           +S +E E A+IL     +  +       W  +++RSA+ + P S        PS  + K 
Sbjct: 15  WSEREVETAEILALLYHRFSLLSSVTYSWGCKKQRSAIQNNPSSYGGAAVLPPSSDAGKA 74

Query: 74  KESSPTSPLVLNSLPLSRSESDEHTNAKHSKKKPSLDKKSQ-FVEAIDELTKQNQGLKGE 133
           + SSP +PL   S P +  ESD+ T  K  K K SL +K + ++  I++LTK    +  E
Sbjct: 75  QASSPATPL---SFPAT--ESDDKT--KPFKNKVSLKRKREHYLNMIEDLTKNKDSINQE 134

Query: 134 FEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTVESST 193
            E +K+HY  LK  N +LKAK++E+ +     + ++    I             TVE+  
Sbjct: 135 IENVKRHYEQLKEYNFKLKAKQKELSINGPKGEYKNLNLVINQPIQVSVNSSNFTVENEE 194

Query: 194 HQPDPMAE------QSNNGSQNFQ---------IPIGGIPF-YDPSSLSPMGIPDLNISL 253
                + E       SN G   FQ         + +G      + S++ P+ IPDLN+S+
Sbjct: 195 KMKQQIMEIPNHHNHSNFGLVQFQCASSSSNPTLQVGSSSLGRNSSNMGPLAIPDLNLSI 254

Query: 254 EEI------------------NQRNYSRFMAARARKNRIQICKNKNNGVTKLQTPPNNPY 276
           EE                   N  + S+ MAA+AR+ RIQI + K   V    T    P 
Sbjct: 255 EESVHVDTCQPLDEATSNNNNNNMDLSKVMAAQARQRRIQIFRLKKPVVGNNNTKQRQPS 308

[Close]
BLAST of CmoCh12G003580 vs. NCBI nr
Match: gi|778671593|ref|XP_011649664.1| (PREDICTED: MKL/myocardin-like protein 1 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 2.9e-60
Identity = 160/303 (52.81%), Postives = 209/303 (68.98%), Query Frame = 1 

Query: 3   ATPHCASLDFA---FSPKEHEVAQILLEFS---KKSVVYLGFIPVWTLRRKRSALVSPPE 62
           ++ H  S+ F    FSP+EH VAQIL +     ++S   LG  P W +RRKRSA+ SPP+
Sbjct: 5   SSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPD 64

Query: 63  SSASVPSPP---------SKKVKESSPTSPLVLNSLPLSRSESDEHTN-AKHSKKKPSLD 122
           +S+ +  PP         S++ KESSPT+PL L+SLPLSRSESDE+T  AK SKKK  +D
Sbjct: 65  TSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVD 124

Query: 123 KKSQFVEAIDELTKQNQGLKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAI 182
           KKSQ++E I++LT Q Q L+G+ EAMK+H+ +LK INSELKAKKQE++ G +   N S  
Sbjct: 125 KKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFS---NLSVN 184

Query: 183 PEIGTSSS-AMEVVKLLTVESST---------------HQPDPMAEQSNNGSQNFQIPIG 242
           P+ GTS+S AME+ KL TV+SS                +Q  P+AEQSN+  QN+QIPIG
Sbjct: 185 PKFGTSTSVAMEIAKL-TVKSSDSNVENNHDECEPSMKNQTVPVAEQSNS-IQNYQIPIG 244

Query: 243 GIPFYDPSSLSPMGIPDLNISLEEINQRNYSRFMAARARKNRIQICKNK-----NNGVTK 269
           GIP YDPS L PMGIPDLN+SLE+I  +NY++++AA+AR+NRIQI KNK     NNG  K
Sbjct: 245 GIPLYDPS-LGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPK 301

[Close]
BLAST of CmoCh12G003580 vs. NCBI nr
Match: gi|659088121|ref|XP_008444813.1| (PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 3.8e-60
Identity = 163/301 (54.15%), Postives = 206/301 (68.44%), Query Frame = 1 

Query: 3   ATPHCASLDFA---FSPKEHEVAQILLEFS---KKSVVYLGFIPVWTLRRKRSALVSPPE 62
           ++ H  S+ F    FSP+E  VAQIL +     +KS   LG  P W +RRKRSA+ SPP+
Sbjct: 5   SSTHQCSISFDSDDFSPEELFVAQILQQLPLLIQKSNFSLGLSPSWPIRRKRSAVDSPPD 64

Query: 63  SSASVPSPP---------SKKVKESSPTSPLVLNSLPLSRSESDEH-TNAKHSKKKPSLD 122
           + + +  PP         S++ KESSPT+PL LNSLPLSRSESDE+ T AK SKKK  +D
Sbjct: 65  TPSLITQPPLPPQPCPPSSEREKESSPTTPLSLNSLPLSRSESDENITIAKVSKKKAPVD 124

Query: 123 KKSQFVEAIDELTKQNQGLKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAI 182
           KKSQ++E ID+LT Q Q L+G+ EAMK+H+ +LK INSELKAKKQE++ G     N S  
Sbjct: 125 KKSQYLETIDKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILDGFG---NVSVN 184

Query: 183 PEIGTSSS-AMEVVKLLTVESS---------------THQPDPMAEQSNNGSQNFQIPIG 242
           PEIGTSSS AMEV K LTV+SS                +Q  P AEQ N+ ++N+QIPIG
Sbjct: 185 PEIGTSSSVAMEVAK-LTVKSSYSNVENNHDECEPSMKNQTVPTAEQGNS-NRNYQIPIG 244

Query: 243 GIPFYDPSSLSPMGIPDLNISLEEINQRNYSRFMAARARKNRIQICKNK---NNGVTKLQ 269
           GIP YDP SL PMGIPDLN+SLE+I  ++Y++++AARAR+NRIQI KNK   NNG  KLQ
Sbjct: 245 GIPLYDP-SLGPMGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNKNNNNNGAPKLQ 299

[Close]
BLAST of CmoCh12G003580 vs. NCBI nr
Match: gi|659088119|ref|XP_008444812.1| (PREDICTED: uncharacterized protein LOC103488048 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 5.9e-53
Identity = 146/279 (52.33%), Postives = 184/279 (65.95%), Query Frame = 1 

Query: 3   ATPHCASLDF---AFSPKEHEVAQILLEFS---KKSVVYLGFIPVWTLRRKRSALVSPPE 62
           A+ H  S+ F    F+PKEH VA IL E +   +KS   LG  P W +RRKRSA+VSPP+
Sbjct: 2   ASTHKCSISFNSDEFTPKEHFVADILEELTLLIQKSEFSLGLPPSWPVRRKRSAVVSPPD 61

Query: 63  SSASVPSPP-----SKKVKESSPTSPLVLNSLPLSRSESDEH-TNAKHSKKKPSLDKKSQ 122
            S+ V  PP     S++ KESSPT+PL  N L   RSESDE+  N K SK+K  LDKK Q
Sbjct: 62  CSSVVAQPPPPPSSSERAKESSPTTPLSFNLL---RSESDENIANVKVSKRKAPLDKKFQ 121

Query: 123 FVEAIDELTKQNQGLKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIG 182
           ++E ID+LT QNQ L  + EAMKQH+ HLK INSELKAKKQE+ +    S N+S IPEIG
Sbjct: 122 YLETIDKLTHQNQALVKDVEAMKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEIPEIG 181

Query: 183 TSSSAMEVVKLLTVESSTH--------QPDPMAEQSNNGSQNFQIPIGGIPFYDPSSLSP 242
           TSSS  +      VE++ H        Q  P+AEQSN+ +QN QIP G IP  D     P
Sbjct: 182 TSSSGTK-SSHSNVENNLHECQPSMKNQTAPVAEQSNH-NQNHQIPTGEIPLLD-----P 241

Query: 243 MGIPDLNISLEEINQRNYSRFMAARARKNRIQICKNKNN 262
           MGIPDLN+++E+  Q NY+++MAA+AR+NRI+I KNK N
Sbjct: 242 MGIPDLNLTIEQNVQMNYTKYMAAKARQNRIRIWKNKKN 270

[Close]
BLAST of CmoCh12G003580 vs. NCBI nr
Match: gi|778671589|ref|XP_011649663.1| (PREDICTED: uncharacterized protein LOC105434650 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 3.5e-45
Identity = 133/269 (49.44%), Postives = 170/269 (63.20%), Query Frame = 1 

Query: 14  FSPKEHEVAQILLEFS---KKSVVYLGFIPVWTLRRKRSALVSPPESSASVPSPP----- 73
           F+P++H+VA IL E     +KS   LG  P W +RRKRSA+VSP   S  V  PP     
Sbjct: 16  FTPEDHKVADILKELPLLIQKSEFSLGLPPSWPIRRKRSAVVSPLGCSTVVAQPPPPPSS 75

Query: 74  SKKVKESSPTSPLVLNSLPLSRSESDEH-TNAKHSKKKPSLDKKSQFVEAIDELTKQNQG 133
           S++ KE+SPT+PL L+SL LSRSESDE+  N K SK+K  L KK +  E++D+LT QNQ 
Sbjct: 76  SEEDKETSPTTPLSLDSLTLSRSESDENIANVKVSKRKAPLAKKFKCAESVDKLTHQNQA 135

Query: 134 LKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTSSSAMEVVKLLTV 193
           L   FEA KQ + H K INSELKAKKQE  +    S N S IPE GTS+S  +    L +
Sbjct: 136 LGENFEAKKQRFAHPKTINSELKAKKQEASMILGGSTNRSEIPENGTSTSGTKSSD-LNM 195

Query: 194 ESSTH--------QPDPMAEQSNNGSQNFQIPIGGIPFYDPSSLSPMGIPDLNISLEEIN 253
           E++ H        Q  PMAEQSN+ +QN QIPI  IP  D      MGIPDLN+++E+  
Sbjct: 196 ENNLHECEPSTKNQTAPMAEQSND-NQNHQIPIDEIPLLD-----LMGIPDLNLTVEQNC 255

Query: 254 QRNYSRFMAARARKNRIQICKNKNNGVTK 266
           + NY + +AA+AR+NR +ICKNK N   K
Sbjct: 256 RVNYKKQLAAKARQNRARICKNKRNKKNK 277

[Close]
BLAST of CmoCh12G003580 vs. NCBI nr
Match: gi|703129823|ref|XP_010104457.1| (hypothetical protein L484_016056 [Morus notabilis])

HSP 1 Score: 94.7 bits (234), Expect = 2.6e-16
Identity = 106/303 (34.98%), Postives = 153/303 (50.50%), Query Frame = 1 

Query: 14  FSPKEHEVAQILLEFSKKSVVYLGFIPV----WTLRRKRSALVS-----------PPESS 73
           F+  E EVA ILLE  +K      F P+    W  +++RS   S           PPE S
Sbjct: 15  FADDEFEVAGILLEL-RKLFTATEFFPLFRVEWGSKKRRSTTYSNNQASPATVPPPPEPS 74

Query: 74  ASVPSPP-----SKKVKESSPTSPLVLNSLPLSRSESDEHTNAKHSKKKPSLDKKSQFVE 133
           +S P  P     + K K SSP +PL       S SESDE    K SK+K  L K++ ++E
Sbjct: 75  SSPPEDPVDERCTGKNKASSPATPL-----SFSPSESDE--KRKPSKRK--LLKRADWLE 134

Query: 134 AIDELTKQNQGLKGEFEAMKQHYNHLKAINSELKAKKQEMILGSNSSKNESAIPEIGTS- 193
            I ELT++   LK E E + ++++ LKA NSELKA+K+E+I  +   K E  + +IG S 
Sbjct: 135 LIKELTERKDMLKKEVENVSRYFDKLKAFNSELKARKEELI--TRGLKKEIRLSKIGQSV 194

Query: 194 SSAMEV--VKLLTVESSTHQPDPMAE---QSNNGSQNFQ-----IPIGGIPFYDPSS--L 253
           +  ME+      T     H P  + +   Q+   S+N Q     IP  G    + S+  +
Sbjct: 195 NHEMELGQPNASTPFPEFHHPPLIMDRTVQATGISENLQFSASHIPSSGFSRNNNSNNIV 254

Query: 254 SPMGIPDLNISLEE-------------INQRNYSRFMAARARKNRIQICKNKNN-GVTKL 270
           SP+G+PDLN+S EE             +  +N SR MA+ AR+ R QIC++K +    KL
Sbjct: 255 SPLGLPDLNVSPEEPFGMDFSQPFDLAMADKNRSRAMASEARRRRRQICRDKTSVAANKL 305

The following BLAST results are available for this feature:
BLAST of CmoCh12G003580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh12G003580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRP1_CUCSA2.1e-6052.81Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368820 PE=4 SV=1[more]
A0A0A0LL74_CUCSA2.4e-4549.44Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368810 PE=4 SV=1[more]
W9RWQ6_9ROSA1.8e-1634.98Uncharacterized protein OS=Morus notabilis GN=L484_016056 PE=4 SV=1[more]
V7AR00_PHAVU2.7e-1229.78Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G017200g PE=4 SV=1[more]
G7I779_MEDTR4.3e-1028.24Uncharacterized protein OS=Medicago truncatula GN=MTR_1g025290 PE=4 SV=1[more]
BLAST of CmoCh12G003580 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh12G003580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778671593|ref|XP_011649664.1|2.9e-6052.81PREDICTED: MKL/myocardin-like protein 1 [Cucumis sativus][more]
gi|659088121|ref|XP_008444813.1|3.8e-6054.15PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo][more]
gi|659088119|ref|XP_008444812.1|5.9e-5352.33PREDICTED: uncharacterized protein LOC103488048 [Cucumis melo][more]
gi|778671589|ref|XP_011649663.1|3.5e-4549.44PREDICTED: uncharacterized protein LOC105434650 [Cucumis sativus][more]
gi|703129823|ref|XP_010104457.1|2.6e-1634.98hypothetical protein L484_016056 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G003580.1CmoCh12G003580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 108..152
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G003580Cucsa.159920Cucumber (Gy14) v1cgycmoB0451
CmoCh12G003580CmaCh12G004070Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G003580CmaCh05G003080Cucurbita maxima (Rimu)cmacmoB770
CmoCh12G003580Cla022419Watermelon (97103) v1cmowmB134
CmoCh12G003580Csa2G368810Cucumber (Chinese Long) v2cmocuB158
CmoCh12G003580MELO3C011015Melon (DHL92) v3.5.1cmomeB146
CmoCh12G003580ClCG08G014270Watermelon (Charleston Gray)cmowcgB161
CmoCh12G003580CSPI02G20880Wild cucumber (PI 183967)cmocpiB160
CmoCh12G003580Lsi08G013150Bottle gourd (USVL1VR-Ls)cmolsiB175
CmoCh12G003580Cp4.1LG11g02580Cucurbita pepo (Zucchini)cmocpeB154
CmoCh12G003580Cp4.1LG07g03750Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G003580MELO3C011015.2Melon (DHL92) v3.6.1cmomedB161
CmoCh12G003580CsaV3_2G029550Cucumber (Chinese Long) v3cmocucB0186
CmoCh12G003580Cla97C08G157830Watermelon (97103) v2cmowmbB178
CmoCh12G003580Bhi04G000125Wax gourdcmowgoB0191
CmoCh12G003580CsGy2G020600Cucumber (Gy14) v2cgybcmoB171
CmoCh12G003580Carg03992Silver-seed gourdcarcmoB1310
CmoCh12G003580Carg09403Silver-seed gourdcarcmoB0192
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh12G003580CmoCh05G003110Cucurbita moschata (Rifu)cmocmoB156
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G003580Cucumber (Chinese Long) v2cmocuB167
CmoCh12G003580Cucumber (Chinese Long) v2cmocuB181
CmoCh12G003580Melon (DHL92) v3.5.1cmomeB156
CmoCh12G003580Melon (DHL92) v3.5.1cmomeB174
CmoCh12G003580Watermelon (Charleston Gray)cmowcgB141
CmoCh12G003580Watermelon (Charleston Gray)cmowcgB146
CmoCh12G003580Watermelon (Charleston Gray)cmowcgB149
CmoCh12G003580Watermelon (97103) v1cmowmB145
CmoCh12G003580Watermelon (97103) v1cmowmB153
CmoCh12G003580Watermelon (97103) v1cmowmB158
CmoCh12G003580Cucurbita pepo (Zucchini)cmocpeB164
CmoCh12G003580Cucurbita pepo (Zucchini)cmocpeB166
CmoCh12G003580Cucurbita pepo (Zucchini)cmocpeB172
CmoCh12G003580Bottle gourd (USVL1VR-Ls)cmolsiB165
CmoCh12G003580Bottle gourd (USVL1VR-Ls)cmolsiB151
CmoCh12G003580Bottle gourd (USVL1VR-Ls)cmolsiB152
CmoCh12G003580Cucumber (Gy14) v2cgybcmoB276
CmoCh12G003580Cucumber (Gy14) v2cgybcmoB703
CmoCh12G003580Cucumber (Gy14) v2cgybcmoB888
CmoCh12G003580Melon (DHL92) v3.6.1cmomedB172
CmoCh12G003580Melon (DHL92) v3.6.1cmomedB193
CmoCh12G003580Silver-seed gourdcarcmoB0543
CmoCh12G003580Cucumber (Chinese Long) v3cmocucB0198
CmoCh12G003580Cucumber (Chinese Long) v3cmocucB0219
CmoCh12G003580Watermelon (97103) v2cmowmbB163
CmoCh12G003580Watermelon (97103) v2cmowmbB166
CmoCh12G003580Wax gourdcmowgoB0219
CmoCh12G003580Cucurbita moschata (Rifu)cmocmoB004
CmoCh12G003580Cucurbita moschata (Rifu)cmocmoB141
CmoCh12G003580Cucurbita moschata (Rifu)cmocmoB162
CmoCh12G003580Cucumber (Gy14) v1cgycmoB0925
CmoCh12G003580Cucurbita maxima (Rimu)cmacmoB032
CmoCh12G003580Cucurbita maxima (Rimu)cmacmoB453
CmoCh12G003580Cucurbita maxima (Rimu)cmacmoB633
CmoCh12G003580Cucurbita maxima (Rimu)cmacmoB843
CmoCh12G003580Wild cucumber (PI 183967)cmocpiB170
CmoCh12G003580Wild cucumber (PI 183967)cmocpiB185
CmoCh12G003580Wild cucumber (PI 183967)cmocpiB189