BLAST of CmoCh12G002180 vs. Swiss-Prot
Match:
LA1_ARATH (La protein 1 OS=Arabidopsis thaliana GN=LA1 PE=1 SV=1)
HSP 1 Score: 278.9 bits (712), Expect = 1.1e-73
Identity = 177/392 (45.15%), Postives = 240/392 (61.22%), Query Frame = 1
Query: 6 LDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLAQD 65
L +ETAK VLRQVEFYFSDSNLP D FLKKT+ S DG+V L+L+CSFS+M+G+L L D
Sbjct: 6 LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLG-D 65
Query: 66 VKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASPFQ 125
K D IPEDT+KAVA+TL++SS +K+S+DGKK+GR EL K E+++EQL+ RT+AASPF
Sbjct: 66 SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125
Query: 126 YDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVSDKRVF 185
YDVK EDVE+FF Q KV NSVR+PRHV++ R+F
Sbjct: 126 YDVKREDVESFFSQYGKV---------------------------NSVRMPRHVAESRIF 185
Query: 186 CGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFE-------SSRS 245
G ALVEF EEDA+ V+ ++L++AG +LELK K++FD ER K+ KF S+
Sbjct: 186 SGVALVEFPTEEDAQNVMKQNLVFAGQELELKPKKEFDNEREKDEVKFANYQPQKGSANQ 245
Query: 246 NASSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSK 305
S+ KNN++ E +YPKGLI++F LK+ +EG K
Sbjct: 246 KNGSDHKNNSAYEPDYPKGLIISFTLKR----------------------SAEEGTTEQK 305
Query: 306 NDSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEA 365
+ E T++T E+ K + +ADK+N EV+ + +D DE+EE
Sbjct: 306 SSEEPTDKTMEESETKPADTP--------DADKENTG------EVQAEGAEDEDDEKEE- 330
Query: 366 EEKPTFASSRNDKNVVSREDLKAIFQKFGSIK 391
K A+ +++K+VV REDLKA+F KFG +K
Sbjct: 366 --KGALATHKDNKDVVLREDLKAVFGKFGDVK 330
BLAST of CmoCh12G002180 vs. Swiss-Prot
Match:
LA2_ARATH (La protein 2 OS=Arabidopsis thaliana GN=LA2 PE=1 SV=1)
HSP 1 Score: 204.5 bits (519), Expect = 2.6e-51
Identity = 128/304 (42.11%), Postives = 178/304 (58.55%), Query Frame = 1
Query: 4 SSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLA 63
SS ++ETAKK+L QVEFYFSDSNLP DGFL + + S DG+V L LVCSFSRM+ L L
Sbjct: 3 SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLG 62
Query: 64 QDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASP 123
++ + IP V+ VA L++S +KVS +G++IGR +LSKPEE+LEQ+ RT+AASP
Sbjct: 63 -NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122
Query: 124 FQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVSDKR 183
F+Y +K+EDV +FF Q AK VNSVRLP +++DKR
Sbjct: 123 FEYSIKMEDVSSFFSQYAK---------------------------VNSVRLPPNIADKR 182
Query: 184 VFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNASSN 243
FCGTALVEFS+E+D + +L +SL+YAGA L L K DFD +R ++ S S+
Sbjct: 183 RFCGTALVEFSSEQDTQDILRQSLVYAGADLVLIPKSDFDCQRENMIKQLGKSESH---- 242
Query: 244 WKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEK 303
+ + +G IV FALK + + +K + K D+ + + E
Sbjct: 243 --------NEFRRGQIVKFALKWIASEEKVTNKEKPSALKNKIKEKEDKETGIADREKEN 266
Query: 304 TEQT 308
+ +
Sbjct: 303 GDNS 266
BLAST of CmoCh12G002180 vs. Swiss-Prot
Match:
LHP1_YEAST (La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LHP1 PE=1 SV=2)
HSP 1 Score: 81.6 bits (200), Expect = 2.6e-14
Identity = 90/292 (30.82%), Postives = 128/292 (43.84%), Query Frame = 1
Query: 9 ETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLAQDVKP 68
E + L+QVEFYFS+ N P D FL +T DG V +S + +F+RMK + +P
Sbjct: 28 EVLDRCLKQVEFYFSEFNFPYDRFL-RTTAEKNDGWVPISTIATFNRMKKY-------RP 87
Query: 69 DAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIA--ELSKPEEMLEQLDDRTIAASPFQY 128
V V E L+SS ++VS DG+ + R +L+ + + RT+A F +
Sbjct: 88 -------VDKVIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPH 147
Query: 129 DVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVSDKRVFC 188
EDVEA QI ++ L + + LG ++N VRL R +K+ F
Sbjct: 148 ----EDVEA--SQIPELQENLEAFFKK----LG---------EINQVRLRRDHRNKK-FN 207
Query: 189 GTALVEFSAEEDAEKVL---------TESLLYAGAKLELKSKRDFDEERSKETEKFESSR 248
GT LVEF + E L E L Y G KL + +K+ FD +R K S R
Sbjct: 208 GTVLVEFKTIPECEAFLKSYSNDDESNEILSYEGKKLSVLTKKQFDLQREASKSKNFSGR 267
Query: 249 SNASSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECK 290
S + N + N PK F K G + S + D E K
Sbjct: 268 SRSF-----NGHKKKNLPK-----FPKNKKKNGKEESKEDSSAIADDDEEHK 274
BLAST of CmoCh12G002180 vs. Swiss-Prot
Match:
LRP6B_ARATH (La-related protein 6B OS=Arabidopsis thaliana GN=LARP6B PE=1 SV=2)
HSP 1 Score: 70.5 bits (171), Expect = 6.0e-11
Identity = 57/206 (27.67%), Postives = 97/206 (47.09%), Query Frame = 1
Query: 4 SSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLA 63
+ L +++ +K++ QVE+YFSD NL L + I P+G V + +V SF ++K +
Sbjct: 187 TGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVI--- 246
Query: 64 QDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASP 123
+ +A L++S+ + VSEDGKK+ RI+ ++ E +E+L R I A
Sbjct: 247 ----------NNNSQLAAVLQNSAKLFVSEDGKKVRRISPIT--ESAIEELQSRIIVAEN 306
Query: 124 FQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHV--SD 183
D +++ F + V ++ R+CQ P + + R SD
Sbjct: 307 LPEDHCYQNLMKIFSTVGSVKNI-----RTCQ---------PQNNGSGAPPAARSAAKSD 363
Query: 184 KRVFCGT--ALVEFSAEEDAEKVLTE 206
+F A VE+ E AE+ +TE
Sbjct: 367 GTLFSNKVHAFVEYEIVELAERAVTE 363
BLAST of CmoCh12G002180 vs. Swiss-Prot
Match:
LARP7_MOUSE (La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2)
HSP 1 Score: 68.9 bits (167), Expect = 1.7e-10
Identity = 54/175 (30.86%), Postives = 86/175 (49.14%), Query Frame = 1
Query: 1 MENSSLDQETAKK----------VLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLV 60
ME S+ +E KK + +QV+F+F D+NL +D FL++ I S DG VD+SL+
Sbjct: 9 MEESTKRKEEKKKRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLL 68
Query: 61 CSFSRMKGHLHLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGR---IAELSKP 120
SF++MK L D K +A LKSSS +++ +G +I R + E K
Sbjct: 69 VSFNKMK---KLTTD----------GKLIARALKSSSVVELDLEGTRIRRKKPLGERPKD 128
Query: 121 EEMLEQLDDRTIAASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRY 163
EE +RT+ +V +E FG+ V + + ++S + GF +
Sbjct: 129 EE------ERTVYVELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAF 164
BLAST of CmoCh12G002180 vs. TrEMBL
Match:
A0A0A0LP79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G375250 PE=4 SV=1)
HSP 1 Score: 488.0 bits (1255), Expect = 1.3e-134
Identity = 274/393 (69.72%), Postives = 315/393 (80.15%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTI SPDG+VDLSL+C+FSRMKGHL
Sbjct: 1 MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICTFSRMKGHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
L QDV P+ PEDT+KAVAETL++SS++KVSEDGKK+GR EL KPEE++EQLDDRT+A
Sbjct: 61 ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASPF+YD+KLEDVEAFF Q+ K VNSVRLPRHV+
Sbjct: 121 ASPFEYDIKLEDVEAFFNQVTK---------------------------VNSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
DKRVFCGTAL+EFS EEDAEKVL ESL+YAGAKLELK KR+FDEER+KE EKFESSRS +
Sbjct: 181 DKRVFCGTALIEFSTEEDAEKVLKESLVYAGAKLELKPKREFDEERAKEMEKFESSRSTS 240
Query: 241 SSNWKNNNSS-ESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKN 300
+N NNNSS E++YPKGLIVAF LK ++GS+AE N SH V DKTECKTDEGLDSSKN
Sbjct: 241 GANRSNNNSSPEASYPKGLIVAFTLKSTSSGSTAEGNESHGV-ADKTECKTDEGLDSSKN 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
DSEKT Q N+ KDEEI++S+DDK EA +KNDSGNE+ EVE+QSMDD DE EEAE
Sbjct: 301 DSEKTVQIEETNLSKDEEIKESADDKNGEAVEKNDSGNEKSLEVEEQSMDDTVDEHEEAE 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNI 393
EKPT SRN+ NVVSREDLKA+F+KFGS+K I
Sbjct: 361 EKPTAFQSRNNMNVVSREDLKAVFRKFGSVKFI 365
BLAST of CmoCh12G002180 vs. TrEMBL
Match:
F6H2Y4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03800 PE=4 SV=1)
HSP 1 Score: 389.8 bits (1000), Expect = 5.0e-105
Identity = 243/491 (49.49%), Postives = 316/491 (64.36%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +S D+ET KKV+RQVEFYFSDSNLPRD FLKKTI S DG+V L+L+CSFSRM+ HL
Sbjct: 1 MGTASFDEETVKKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
+L DVKP+ + EDT+KAVAE L++S+T+KVSEDGKKIGR EL KPEE++EQ+D RTIA
Sbjct: 61 NLG-DVKPEDVSEDTLKAVAEILRNSTTLKVSEDGKKIGRATELLKPEEVVEQVDIRTIA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASP +YD KLEDVEA+FGQ AKV NSVRLPRHV+
Sbjct: 121 ASPLEYDAKLEDVEAYFGQFAKV---------------------------NSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
+KRVFCGTAL+E+S EEDA KVL +SL+YAG +LELK K+DFD ER+++TE+FE+SR+
Sbjct: 181 EKRVFCGTALIEYSTEEDAAKVLQQSLVYAGVELELKPKKDFDAERAQQTEEFENSRALL 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTEC-KTDEGLDSSKN 300
SN KNN+++ES YPKGLIV+F LK+ AG S E NG+H+ D + KT+ +DS +N
Sbjct: 241 GSNRKNNSNAESTYPKGLIVSFTLKR--AGGSTEHNGTHEPVNDNADVGKTNTDIDSKEN 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
+ +TE EN+ DEE +S + IE+ +EEK E E S++ E E+ +
Sbjct: 301 VTGETEDKASENINNDEE---NSGEDIEKE-------SEEKVE-EKTSLESEGKETEDGQ 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFSVHICMPI 420
+ + ++ + A K M +
Sbjct: 361 KSSEGCDLKGEEKATGEQKPTAATYKDN-----------------------------MDV 417
Query: 421 LTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVK 480
+ L V F G +K++DFK+GEESGYIR+DEPEAAQK RAAAVL+++GGL VK
Sbjct: 421 VMREDLKSVFQKF----GTVKFVDFKIGEESGYIRYDEPEAAQKVRAAAVLSEEGGLTVK 417
Query: 481 NFIATLEPVSG 491
N+IA LEPV+G
Sbjct: 481 NYIANLEPVTG 417
BLAST of CmoCh12G002180 vs. TrEMBL
Match:
A5AMP9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007260 PE=4 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 5.5e-104
Identity = 243/491 (49.49%), Postives = 315/491 (64.15%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +S D+ET KKV+RQVEFYFSDSNLPRD FLKKTI S DG+V L+L+CSFSRM+ HL
Sbjct: 1 MGTASFDEETVKKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
+L DVKP+ + EDT+KAVAE L++S+T+KVSEDGKKIGR EL KPEE++EQ++ RTIA
Sbjct: 61 NLG-DVKPEDVSEDTLKAVAEILRNSTTLKVSEDGKKIGRATELLKPEEVVEQVNIRTIA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASP +YD KLEDVEA+FGQ AKV NSVRLPRHV+
Sbjct: 121 ASPLEYDAKLEDVEAYFGQFAKV---------------------------NSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
+KRVFCGTAL+E+S EEDA KVL +SL+YAG +LELK K+DFD ER+++TE+FE+SR+
Sbjct: 181 EKRVFCGTALIEYSTEEDAAKVLQQSLVYAGVELELKPKKDFDAERAQQTEEFENSRALL 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTEC-KTDEGLDSSKN 300
SN KNN+++ES YPKGLIV+F LK+ AG S E NG+H+ D + KT+ +DS +N
Sbjct: 241 GSNRKNNSNAESTYPKGLIVSFTLKR--AGGSTEHNGTHEPXNDNADVGKTNXDIDSKEN 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
+ +TE EN DEE +S + IE+ +EEK E E S++ E E+
Sbjct: 301 VTGETEDKASENXNNDEE---NSGEDIEKE-------SEEKVE-EKTSLESEGKETEDGX 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFSVHICMPI 420
+ + ++ + A K M +
Sbjct: 361 KSSEGCDLKGEEKATGEQKPTAATYKDN-----------------------------MDV 417
Query: 421 LTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVK 480
+ L V F G +K++DFK+GEESGYIR+DEPEAAQKARAAAVL+++GGL VK
Sbjct: 421 VMREDLKSVFQKF----GTVKFVDFKIGEESGYIRYDEPEAAQKARAAAVLSEEGGLTVK 417
Query: 481 NFIATLEPVSG 491
N+IA LEPV+G
Sbjct: 481 NYIANLEPVTG 417
BLAST of CmoCh12G002180 vs. TrEMBL
Match:
W9RMR2_9ROSA (La-like protein OS=Morus notabilis GN=L484_007270 PE=4 SV=1)
HSP 1 Score: 375.6 bits (963), Expect = 9.7e-101
Identity = 237/491 (48.27%), Postives = 308/491 (62.73%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +SLD+ET+KKVLRQVEFYFSDSNLPRD FLKK+I S DGMV L+L+CSF+RM+ +L
Sbjct: 1 MATASLDEETSKKVLRQVEFYFSDSNLPRDNFLKKSINESEDGMVSLALICSFARMRNYL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
L DVKPD +PEDT+KAVAETLK S +K+SEDGK++GR EL KP+E++EQLD RT+A
Sbjct: 61 DLG-DVKPDNVPEDTLKAVAETLKISKFLKISEDGKRVGRSIELLKPDELIEQLDVRTVA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
A PF+YDVK EDVEAFF Q AKV NSVRLPRH++
Sbjct: 121 ALPFEYDVKREDVEAFFNQYAKV---------------------------NSVRLPRHIA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
DKR FCG ALVEFS EEDAEK+L +SL+YAG KL+LK K+DFD ER KE E+FE+S
Sbjct: 181 DKRFFCGAALVEFSKEEDAEKILEQSLVYAGVKLDLKPKKDFDAEREKEAEEFENSCPLT 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTT-DKTECKTDEGLDSSKN 300
SS KN++++E+NYPKGLIVAFA+K+M+ S ++NG+H+ T + TD G
Sbjct: 241 SSKGKNSSNTEANYPKGLIVAFAVKRMSGEGSEKQNGTHEPATHEPASDNTDAG------ 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
G ++G SSD+ EE + + K E+ +++D+ D E++
Sbjct: 301 -------RAGADLG-------SSDNATEETIQPS------KEEIPRENVDNGNDS--ESD 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFSVHICMPI 420
K T + +N V+ ++ + K+ M +
Sbjct: 361 GKETKEGENSSENPVAEKEENGERRTAADYKDD------------------------MDV 407
Query: 421 LTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVK 480
+ L V F G +K++DFK+G ESGYIRF+EPEA QKARAAAVLA++GGL VK
Sbjct: 421 VLREDLKAVFQKF----GTVKFVDFKIGAESGYIRFEEPEATQKARAAAVLAEEGGLVVK 407
Query: 481 NFIATLEPVSG 491
NFIATLEPV+G
Sbjct: 481 NFIATLEPVTG 407
BLAST of CmoCh12G002180 vs. TrEMBL
Match:
B9RS49_RICCO (Lupus la ribonucleoprotein, putative OS=Ricinus communis GN=RCOM_0802990 PE=4 SV=1)
HSP 1 Score: 374.4 bits (960), Expect = 2.2e-100
Identity = 237/498 (47.59%), Postives = 322/498 (64.66%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +SLD+ TAK+VLRQVEFYFSDSNLPRD F++ I S DGMV LSL+CSF +MKG+L
Sbjct: 1 MATASLDEGTAKEVLRQVEFYFSDSNLPRDNFMRNNINESEDGMVSLSLICSFKKMKGYL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
L QDVKP+ +PE TV+AVA+TL+ S+++K+SEDGKK+GRIA L KPEE +EQLD RTIA
Sbjct: 61 KL-QDVKPEDVPEHTVQAVADTLRKSTSLKISEDGKKVGRIAALLKPEEAIEQLDIRTIA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASP QYD K+EDV++FFGQ AKV +SVR+PRHV+
Sbjct: 121 ASPLQYDAKMEDVQSFFGQYAKV---------------------------SSVRMPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
DKRVFCG+AL+EFS EED E VL +SL++ G +LELK K++FD ER K+ E+F+SSR +
Sbjct: 181 DKRVFCGSALIEFSNEEDTENVLKQSLVFKGVQLELKPKKEFDSERIKQEEEFKSSRPFS 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHD-VTTDKTECKTDEGLDSSKN 300
SN KNN +E+ YPKGL+VAF LK ++AG S E++G + V+ D K D S +N
Sbjct: 241 GSNNKNN--AEATYPKGLVVAFTLKGVSAGGSVEQDGGQEPVSVDANASKADGEPKSLEN 300
Query: 301 DSEKTEQTGGENVGKDEE-----IQKSSDDKIEEAD-KKNDSGNEEKPEVE-DQSMDDPT 360
SE+ ++ EN+ D+E I++ ++KI+E + +N S ++E E+ ++ ++
Sbjct: 301 ASEENKEKLSENISADKENDEMNIEEEKEEKIDEENGSENVSADKENHEMNIEEVKEEKI 360
Query: 361 DEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFS 420
D +E K T ++ ++ +++E K K S ++
Sbjct: 361 DGENGSESKGTETEGKSSEDPIAKEKKKEEHVKADSYRDN-------------------- 420
Query: 421 VHICMPILTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLAD 480
M ++ L + F G +KYIDFK+GEESGY+RF++PEAAQKARAAAVLA
Sbjct: 421 ----MNVVMREDLKAIFEKF----GTVKYIDFKIGEESGYVRFEQPEAAQKARAAAVLAK 440
Query: 481 QGGLAVKNFIATLEPVSG 491
GGLAVKNFIA LEPV+G
Sbjct: 481 DGGLAVKNFIAILEPVTG 440
BLAST of CmoCh12G002180 vs. TAIR10
Match:
AT4G32720.1 (AT4G32720.1 La protein 1)
HSP 1 Score: 278.9 bits (712), Expect = 6.2e-75
Identity = 177/392 (45.15%), Postives = 240/392 (61.22%), Query Frame = 1
Query: 6 LDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLAQD 65
L +ETAK VLRQVEFYFSDSNLP D FLKKT+ S DG+V L+L+CSFS+M+G+L L D
Sbjct: 6 LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLG-D 65
Query: 66 VKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASPFQ 125
K D IPEDT+KAVA+TL++SS +K+S+DGKK+GR EL K E+++EQL+ RT+AASPF
Sbjct: 66 SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125
Query: 126 YDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVSDKRVF 185
YDVK EDVE+FF Q KV NSVR+PRHV++ R+F
Sbjct: 126 YDVKREDVESFFSQYGKV---------------------------NSVRMPRHVAESRIF 185
Query: 186 CGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFE-------SSRS 245
G ALVEF EEDA+ V+ ++L++AG +LELK K++FD ER K+ KF S+
Sbjct: 186 SGVALVEFPTEEDAQNVMKQNLVFAGQELELKPKKEFDNEREKDEVKFANYQPQKGSANQ 245
Query: 246 NASSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSK 305
S+ KNN++ E +YPKGLI++F LK+ +EG K
Sbjct: 246 KNGSDHKNNSAYEPDYPKGLIISFTLKR----------------------SAEEGTTEQK 305
Query: 306 NDSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEA 365
+ E T++T E+ K + +ADK+N EV+ + +D DE+EE
Sbjct: 306 SSEEPTDKTMEESETKPADTP--------DADKENTG------EVQAEGAEDEDDEKEE- 330
Query: 366 EEKPTFASSRNDKNVVSREDLKAIFQKFGSIK 391
K A+ +++K+VV REDLKA+F KFG +K
Sbjct: 366 --KGALATHKDNKDVVLREDLKAVFGKFGDVK 330
BLAST of CmoCh12G002180 vs. TAIR10
Match:
AT1G79880.1 (AT1G79880.1 RNA recognition motif (RRM)-containing protein)
HSP 1 Score: 204.5 bits (519), Expect = 1.5e-52
Identity = 128/304 (42.11%), Postives = 178/304 (58.55%), Query Frame = 1
Query: 4 SSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLA 63
SS ++ETAKK+L QVEFYFSDSNLP DGFL + + S DG+V L LVCSFSRM+ L L
Sbjct: 3 SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLG 62
Query: 64 QDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASP 123
++ + IP V+ VA L++S +KVS +G++IGR +LSKPEE+LEQ+ RT+AASP
Sbjct: 63 -NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122
Query: 124 FQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVSDKR 183
F+Y +K+EDV +FF Q AK VNSVRLP +++DKR
Sbjct: 123 FEYSIKMEDVSSFFSQYAK---------------------------VNSVRLPPNIADKR 182
Query: 184 VFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNASSN 243
FCGTALVEFS+E+D + +L +SL+YAGA L L K DFD +R ++ S S+
Sbjct: 183 RFCGTALVEFSSEQDTQDILRQSLVYAGADLVLIPKSDFDCQRENMIKQLGKSESH---- 242
Query: 244 WKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEK 303
+ + +G IV FALK + + +K + K D+ + + E
Sbjct: 243 --------NEFRRGQIVKFALKWIASEEKVTNKEKPSALKNKIKEKEDKETGIADREKEN 266
Query: 304 TEQT 308
+ +
Sbjct: 303 GDNS 266
BLAST of CmoCh12G002180 vs. TAIR10
Match:
AT2G43970.1 (AT2G43970.1 RNA-binding protein)
HSP 1 Score: 70.5 bits (171), Expect = 3.4e-12
Identity = 57/206 (27.67%), Postives = 97/206 (47.09%), Query Frame = 1
Query: 4 SSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLA 63
+ L +++ +K++ QVE+YFSD NL L + I P+G V + +V SF ++K +
Sbjct: 187 TGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVI--- 246
Query: 64 QDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASP 123
+ +A L++S+ + VSEDGKK+ RI+ ++ E +E+L R I A
Sbjct: 247 ----------NNNSQLAAVLQNSAKLFVSEDGKKVRRISPIT--ESAIEELQSRIIVAEN 306
Query: 124 FQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHV--SD 183
D +++ F + V ++ R+CQ P + + R SD
Sbjct: 307 LPEDHCYQNLMKIFSTVGSVKNI-----RTCQ---------PQNNGSGAPPAARSAAKSD 363
Query: 184 KRVFCGT--ALVEFSAEEDAEKVLTE 206
+F A VE+ E AE+ +TE
Sbjct: 367 GTLFSNKVHAFVEYEIVELAERAVTE 363
BLAST of CmoCh12G002180 vs. TAIR10
Match:
AT3G19090.1 (AT3G19090.1 RNA-binding protein)
HSP 1 Score: 59.7 bits (143), Expect = 5.9e-09
Identity = 63/257 (24.51%), Postives = 119/257 (46.30%), Query Frame = 1
Query: 6 LDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKG---HLHL 65
L + K+++QVE+ F+D +L + + K I P+G V +S + S ++K + HL
Sbjct: 140 LSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHL 199
Query: 66 AQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAAS 125
V+ L+SSS + VSEDGKK+ R ++ + + E+L RT+ A
Sbjct: 200 ----------------VSLALRSSSKLVVSEDGKKVKRTSQFTDRDR--EELQGRTVVAE 259
Query: 126 PFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVSDK 185
D +++E FG + V ++ + H N+ + +F +++++ D
Sbjct: 260 NLPDDHSYQNLEKIFGVVGNVKAIRI-CHPPESNSSRPKGDFLMSNKIHAL----IEYDN 319
Query: 186 RVFCGTALVEFSAEEDAEKVL-TESLLYAGAKLELKSKRDF-----DEERSKETEKFESS 245
V A+ + + E + K L LL K LK++R+F D+E +S
Sbjct: 320 TVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSVLKNRRNFDGILIDDELPSYESGEDSP 373
Query: 246 RSNASSNWKNNNSSESN 254
R + + + +N+ ++N
Sbjct: 380 RLHLTESQLDNDGDDNN 373
BLAST of CmoCh12G002180 vs. TAIR10
Match:
AT5G46250.1 (AT5G46250.1 RNA-binding protein)
HSP 1 Score: 53.5 bits (127), Expect = 4.3e-07
Identity = 73/294 (24.83%), Postives = 125/294 (42.52%), Query Frame = 1
Query: 9 ETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHLHLAQDVKP 68
E +K++RQVE+YFSD NLP D FL + + G V +S + +F +MK L +D
Sbjct: 102 ELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMK---KLTRD--- 161
Query: 69 DAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIAASPFQYDV 128
+ LK SS + VS D KK+ R++ L PE + T+ D
Sbjct: 162 -------HALIVSALKESSFLVVSADEKKVKRLSPL--PE--IRDPKIFTVLVENLPEDH 221
Query: 129 KLEDVEAFFGQIAKVDSLLLSIHRSCQNAL--GFRYNFPTDLQVNSVRLPRHVSDKRVFC 188
E++ FG+ + S+ + + + + G + NF RL V + V
Sbjct: 222 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENF------IRTRLHAFVEYETVEA 281
Query: 189 G-TALVEFSAEEDAEKVLTESLL-YAGAKLELK--SKRDFDE--------------ERSK 248
A + E+D L LL A K + ++R+ D+ E++K
Sbjct: 282 AEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNK 341
Query: 249 ETEKFESSRSNASSNWKN----NNSSESNYPKGLIVAFALKKMTAGSSAEENGS 279
+T + ++ R + S N + N+ + N KG +V ++ G + +G+
Sbjct: 342 KTREHQNHRLHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGT 372
BLAST of CmoCh12G002180 vs. NCBI nr
Match:
gi|659088541|ref|XP_008445036.1| (PREDICTED: la protein 1 [Cucumis melo])
HSP 1 Score: 493.4 bits (1269), Expect = 4.6e-136
Identity = 275/394 (69.80%), Postives = 316/394 (80.20%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
MEN+SLDQE AKKVLRQVEFYFSDSNLPRDGFL+K+I SPDGMVDLSL+C+F+RMKGHL
Sbjct: 1 MENTSLDQEKAKKVLRQVEFYFSDSNLPRDGFLRKSISESPDGMVDLSLICTFTRMKGHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
L QDV P+ PEDT+KAVAETL++SS++KVSEDGKK+GR EL KPEE++EQLDDRT+A
Sbjct: 61 ELKQDVTPEDFPEDTLKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASPF+YD+KLEDVEAFF ++ K VNSVRLPRHV+
Sbjct: 121 ASPFEYDIKLEDVEAFFDRVTK---------------------------VNSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
DKRVFCGTAL+EFS EEDAEKVL ESL+YAGAKLELK KR+FDEER+KE EKFESSRS
Sbjct: 181 DKRVFCGTALIEFSTEEDAEKVLKESLVYAGAKLELKPKREFDEERAKEMEKFESSRSTL 240
Query: 241 SSNWKNNNSS-ESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGL-DSSK 300
+N NNNSS ES+YPKGLIVAF LK ++G+SAEEN SH V DKTECKTDEGL DSSK
Sbjct: 241 GANRSNNNSSPESSYPKGLIVAFTLKSTSSGNSAEENESHGVAADKTECKTDEGLEDSSK 300
Query: 301 NDSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEA 360
ND EKTEQ N+ KDEEI+KS+DDK EA++KND+GNE EVE+Q MD DE+EEA
Sbjct: 301 NDPEKTEQIEETNLSKDEEIKKSADDKNGEAEEKNDTGNERSLEVEEQCMDGTVDEQEEA 360
Query: 361 EEKPTFASSRNDKNVVSREDLKAIFQKFGSIKNI 393
EEKPT SRN+ NVVSREDLKA+FQKFGS+K I
Sbjct: 361 EEKPTALKSRNNMNVVSREDLKAVFQKFGSVKFI 367
BLAST of CmoCh12G002180 vs. NCBI nr
Match:
gi|449465127|ref|XP_004150280.1| (PREDICTED: la protein 1 [Cucumis sativus])
HSP 1 Score: 488.0 bits (1255), Expect = 1.9e-134
Identity = 274/393 (69.72%), Postives = 315/393 (80.15%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M N+SLDQE AKKVLRQVEFYFSDSNLPRD FL+KTI SPDG+VDLSL+C+FSRMKGHL
Sbjct: 1 MGNTSLDQEMAKKVLRQVEFYFSDSNLPRDTFLRKTISESPDGLVDLSLICTFSRMKGHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
L QDV P+ PEDT+KAVAETL++SS++KVSEDGKK+GR EL KPEE++EQLDDRT+A
Sbjct: 61 ELKQDVTPENFPEDTMKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASPF+YD+KLEDVEAFF Q+ K VNSVRLPRHV+
Sbjct: 121 ASPFEYDIKLEDVEAFFNQVTK---------------------------VNSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
DKRVFCGTAL+EFS EEDAEKVL ESL+YAGAKLELK KR+FDEER+KE EKFESSRS +
Sbjct: 181 DKRVFCGTALIEFSTEEDAEKVLKESLVYAGAKLELKPKREFDEERAKEMEKFESSRSTS 240
Query: 241 SSNWKNNNSS-ESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKN 300
+N NNNSS E++YPKGLIVAF LK ++GS+AE N SH V DKTECKTDEGLDSSKN
Sbjct: 241 GANRSNNNSSPEASYPKGLIVAFTLKSTSSGSTAEGNESHGV-ADKTECKTDEGLDSSKN 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
DSEKT Q N+ KDEEI++S+DDK EA +KNDSGNE+ EVE+QSMDD DE EEAE
Sbjct: 301 DSEKTVQIEETNLSKDEEIKESADDKNGEAVEKNDSGNEKSLEVEEQSMDDTVDEHEEAE 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNI 393
EKPT SRN+ NVVSREDLKA+F+KFGS+K I
Sbjct: 361 EKPTAFQSRNNMNVVSREDLKAVFRKFGSVKFI 365
BLAST of CmoCh12G002180 vs. NCBI nr
Match:
gi|225430017|ref|XP_002284157.1| (PREDICTED: la protein 1 [Vitis vinifera])
HSP 1 Score: 389.8 bits (1000), Expect = 7.1e-105
Identity = 243/491 (49.49%), Postives = 316/491 (64.36%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +S D+ET KKV+RQVEFYFSDSNLPRD FLKKTI S DG+V L+L+CSFSRM+ HL
Sbjct: 1 MGTASFDEETVKKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
+L DVKP+ + EDT+KAVAE L++S+T+KVSEDGKKIGR EL KPEE++EQ+D RTIA
Sbjct: 61 NLG-DVKPEDVSEDTLKAVAEILRNSTTLKVSEDGKKIGRATELLKPEEVVEQVDIRTIA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASP +YD KLEDVEA+FGQ AKV NSVRLPRHV+
Sbjct: 121 ASPLEYDAKLEDVEAYFGQFAKV---------------------------NSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
+KRVFCGTAL+E+S EEDA KVL +SL+YAG +LELK K+DFD ER+++TE+FE+SR+
Sbjct: 181 EKRVFCGTALIEYSTEEDAAKVLQQSLVYAGVELELKPKKDFDAERAQQTEEFENSRALL 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTEC-KTDEGLDSSKN 300
SN KNN+++ES YPKGLIV+F LK+ AG S E NG+H+ D + KT+ +DS +N
Sbjct: 241 GSNRKNNSNAESTYPKGLIVSFTLKR--AGGSTEHNGTHEPVNDNADVGKTNTDIDSKEN 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
+ +TE EN+ DEE +S + IE+ +EEK E E S++ E E+ +
Sbjct: 301 VTGETEDKASENINNDEE---NSGEDIEKE-------SEEKVE-EKTSLESEGKETEDGQ 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFSVHICMPI 420
+ + ++ + A K M +
Sbjct: 361 KSSEGCDLKGEEKATGEQKPTAATYKDN-----------------------------MDV 417
Query: 421 LTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVK 480
+ L V F G +K++DFK+GEESGYIR+DEPEAAQK RAAAVL+++GGL VK
Sbjct: 421 VMREDLKSVFQKF----GTVKFVDFKIGEESGYIRYDEPEAAQKVRAAAVLSEEGGLTVK 417
Query: 481 NFIATLEPVSG 491
N+IA LEPV+G
Sbjct: 481 NYIANLEPVTG 417
BLAST of CmoCh12G002180 vs. NCBI nr
Match:
gi|147819226|emb|CAN66913.1| (hypothetical protein VITISV_007260 [Vitis vinifera])
HSP 1 Score: 386.3 bits (991), Expect = 7.9e-104
Identity = 243/491 (49.49%), Postives = 315/491 (64.15%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +S D+ET KKV+RQVEFYFSDSNLPRD FLKKTI S DG+V L+L+CSFSRM+ HL
Sbjct: 1 MGTASFDEETVKKVIRQVEFYFSDSNLPRDNFLKKTISESEDGLVSLALICSFSRMRSHL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
+L DVKP+ + EDT+KAVAE L++S+T+KVSEDGKKIGR EL KPEE++EQ++ RTIA
Sbjct: 61 NLG-DVKPEDVSEDTLKAVAEILRNSTTLKVSEDGKKIGRATELLKPEEVVEQVNIRTIA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
ASP +YD KLEDVEA+FGQ AKV NSVRLPRHV+
Sbjct: 121 ASPLEYDAKLEDVEAYFGQFAKV---------------------------NSVRLPRHVA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
+KRVFCGTAL+E+S EEDA KVL +SL+YAG +LELK K+DFD ER+++TE+FE+SR+
Sbjct: 181 EKRVFCGTALIEYSTEEDAAKVLQQSLVYAGVELELKPKKDFDAERAQQTEEFENSRALL 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTTDKTEC-KTDEGLDSSKN 300
SN KNN+++ES YPKGLIV+F LK+ AG S E NG+H+ D + KT+ +DS +N
Sbjct: 241 GSNRKNNSNAESTYPKGLIVSFTLKR--AGGSTEHNGTHEPXNDNADVGKTNXDIDSKEN 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
+ +TE EN DEE +S + IE+ +EEK E E S++ E E+
Sbjct: 301 VTGETEDKASENXNNDEE---NSGEDIEKE-------SEEKVE-EKTSLESEGKETEDGX 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFSVHICMPI 420
+ + ++ + A K M +
Sbjct: 361 KSSEGCDLKGEEKATGEQKPTAATYKDN-----------------------------MDV 417
Query: 421 LTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVK 480
+ L V F G +K++DFK+GEESGYIR+DEPEAAQKARAAAVL+++GGL VK
Sbjct: 421 VMREDLKSVFQKF----GTVKFVDFKIGEESGYIRYDEPEAAQKARAAAVLSEEGGLTVK 417
Query: 481 NFIATLEPVSG 491
N+IA LEPV+G
Sbjct: 481 NYIANLEPVTG 417
BLAST of CmoCh12G002180 vs. NCBI nr
Match:
gi|703112989|ref|XP_010100272.1| (La-like protein [Morus notabilis])
HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 237/491 (48.27%), Postives = 308/491 (62.73%), Query Frame = 1
Query: 1 MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60
M +SLD+ET+KKVLRQVEFYFSDSNLPRD FLKK+I S DGMV L+L+CSF+RM+ +L
Sbjct: 1 MATASLDEETSKKVLRQVEFYFSDSNLPRDNFLKKSINESEDGMVSLALICSFARMRNYL 60
Query: 61 HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120
L DVKPD +PEDT+KAVAETLK S +K+SEDGK++GR EL KP+E++EQLD RT+A
Sbjct: 61 DLG-DVKPDNVPEDTLKAVAETLKISKFLKISEDGKRVGRSIELLKPDELIEQLDVRTVA 120
Query: 121 ASPFQYDVKLEDVEAFFGQIAKVDSLLLSIHRSCQNALGFRYNFPTDLQVNSVRLPRHVS 180
A PF+YDVK EDVEAFF Q AKV NSVRLPRH++
Sbjct: 121 ALPFEYDVKREDVEAFFNQYAKV---------------------------NSVRLPRHIA 180
Query: 181 DKRVFCGTALVEFSAEEDAEKVLTESLLYAGAKLELKSKRDFDEERSKETEKFESSRSNA 240
DKR FCG ALVEFS EEDAEK+L +SL+YAG KL+LK K+DFD ER KE E+FE+S
Sbjct: 181 DKRFFCGAALVEFSKEEDAEKILEQSLVYAGVKLDLKPKKDFDAEREKEAEEFENSCPLT 240
Query: 241 SSNWKNNNSSESNYPKGLIVAFALKKMTAGSSAEENGSHDVTT-DKTECKTDEGLDSSKN 300
SS KN++++E+NYPKGLIVAFA+K+M+ S ++NG+H+ T + TD G
Sbjct: 241 SSKGKNSSNTEANYPKGLIVAFAVKRMSGEGSEKQNGTHEPATHEPASDNTDAG------ 300
Query: 301 DSEKTEQTGGENVGKDEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAE 360
G ++G SSD+ EE + + K E+ +++D+ D E++
Sbjct: 301 -------RAGADLG-------SSDNATEETIQPS------KEEIPRENVDNGNDS--ESD 360
Query: 361 EKPTFASSRNDKNVVSREDLKAIFQKFGSIKNIYCSISTLNHAFDVRIALLFSVHICMPI 420
K T + +N V+ ++ + K+ M +
Sbjct: 361 GKETKEGENSSENPVAEKEENGERRTAADYKDD------------------------MDV 407
Query: 421 LTHLHLPLVLLSFCSLVGMMKYIDFKMGEESGYIRFDEPEAAQKARAAAVLADQGGLAVK 480
+ L V F G +K++DFK+G ESGYIRF+EPEA QKARAAAVLA++GGL VK
Sbjct: 421 VLREDLKAVFQKF----GTVKFVDFKIGAESGYIRFEEPEATQKARAAAVLAEEGGLVVK 407
Query: 481 NFIATLEPVSG 491
NFIATLEPV+G
Sbjct: 481 NFIATLEPVTG 407
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| LA1_ARATH | 1.1e-73 | 45.15 | La protein 1 OS=Arabidopsis thaliana GN=LA1 PE=1 SV=1 | [more] |
| LA2_ARATH | 2.6e-51 | 42.11 | La protein 2 OS=Arabidopsis thaliana GN=LA2 PE=1 SV=1 | [more] |
| LHP1_YEAST | 2.6e-14 | 30.82 | La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=L... | [more] |
| LRP6B_ARATH | 6.0e-11 | 27.67 | La-related protein 6B OS=Arabidopsis thaliana GN=LARP6B PE=1 SV=2 | [more] |
| LARP7_MOUSE | 1.7e-10 | 30.86 | La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LP79_CUCSA | 1.3e-134 | 69.72 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G375250 PE=4 SV=1 | [more] |
| F6H2Y4_VITVI | 5.0e-105 | 49.49 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03800 PE=4 SV=... | [more] |
| A5AMP9_VITVI | 5.5e-104 | 49.49 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007260 PE=4 SV=1 | [more] |
| W9RMR2_9ROSA | 9.7e-101 | 48.27 | La-like protein OS=Morus notabilis GN=L484_007270 PE=4 SV=1 | [more] |
| B9RS49_RICCO | 2.2e-100 | 47.59 | Lupus la ribonucleoprotein, putative OS=Ricinus communis GN=RCOM_0802990 PE=4 SV... | [more] |
