CmoCh12G001980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G001980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	GATA transcription factor-like protein
Location	Cmo_Chr12 : 1292596 .. 1296626 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCCCGAATATTTCCACAACAATGCTTACTGCTCCCAATTCACCTCCGACAAAGACGCCGCCGCCGCCACCACCGCCGACCACTTCATCGTCGAAGAGCTTCTCGATTTCTCCAACGACGACGACTCCGCCATTGCCGACTCCGGCGGCTTCTTCAATAACGTCACCTGCTTCTTGAATGGAAACTCCGCTGAATCCTCCGCCGCCACGGCGGTGGAGAGTTCCAATTCCTCCTCCTTTTCAGGTTCTGAACGGACTTCGTTTTTCGACGATGTTTCTGCCTCTTCTTTAGCCGATGTCCGTTTCTCCGACGACATCTTCATTCCGGTAAACCTAATTTTTTCTTTCCTTCTTTTTCCCATTCTTTTCTTTTTATGGTTTTGGCCCATTACTTTATGTAATTCCAAAACTTTTCAATTTTAGTATTATTTAAAGTTATTTGTACTCTCTACGAGTTGAGTTTGGAAAATTTCTTTGGACAAACCCGACATTTGGGTTGGTTAAGTTATTACTCGAGCAACCCGAACTGAACTGAGTTCATAACTCAACCCTCTGTTCTCCCTATTCTCCCTCTATTTTCAGGTTGAATTATAGCTTAAATATCAGACTTATCATTAAGATTGGTTAAATGCCAAATATTCATAATTGTAAAGATACAATTGAATTGGATGGTAACCCTATTATGATAATGACAAATATTCATAATTTTAAAGATACAATTGAATTAGATGGTAACCCTATTATGAAGATAAGCCGTTGAAGTTTTAGGTTTTCTGAAATTTAACCTAAAACAAGAAAAAAATAATAATAATAATAAAAATCTAACTCAATCCAACTCTTAACTATTTGAATTGGATTATTCAAATGAAAATTGGATTATTCAAATTCTAGTAAATTTTGGAGTGTGTGCACTAAACAAAATAATAATATAGAATGAATTTAAAAAATGTGAAATAAAATATATGTACATATATATATATATATATATATATAACCTCACCTTTTAACTCATATTTGAAAATGGGAAGTCTAACCCAACCCTAATTCGGGTTTGAAATTGAGCCCTAGTTCTTCCGATTTGAAATTGAGCCCTAGTTCTTTATTGGGCCTCGTTCTGGTTTGAGATTGGGCCTGGTTCTTCCTTATGAGATTGGGCCTGGCCTAATTGTTACTCTGAAATTGGTCCCTCTAACTGGACCCTAATTCTTACGGTTTGAAATGAGAATCTAACCCTAATTCTTATGTTTGAAATTGGCCTAATTCTTACCGTTTGAAATTTGGCATTAATTCAAATGGGAATACAACCCAACCCTAATTCTTACGGTTTGAAATTGTGCTAGTTCATACCGTTTGATATTGGGCCTATTCTTACCGAGATTGGGCTCGATTTGAGATTGGGTCTAGATTAGGCCTCGTTATTAAGGTTTGAAATTGGCCTATTTGAAATTGGGCTAGTTTGAAATTTATCCTAATTCTTACGTTTGAAATTGGTTTTAATTCTTACGGTTTGAGATTGGGGTCTAACTCAACCTAAGAAATTATTATGTTTGAGATAGGCCTAATTCTTATGATTTGAAATTGGGCCTAGTTGTTTGAGATTGGGCCCGGTTTGAGACTGGGCCTAGTTCTTACGTTTGAGATTAGACTTAATTCTTACTGTTTCATGGGCCAACTTTTAATTGAGCCTAGTTCACGGTTTGAAATTGGGCTTAATTCTTACTATTTTATGGGCCTAATTCTTACTGTTTGATGGGCCTAATTTTTAATTGAACCTAGTTATTACGGTCTGCCTAATTCACGGTTTGAAATTGGGCCTAGTTCTTACCGTTTGAAATTGAGCCTAATTCTTGCGGTTTGAAATTGGGATCTAACTCAACCCAAGAAATTATGATTTTTGAGATGGGGCCTAATTCTTATGATTTGAAATTGGGCCTAGATCTTACCGTTTGAGATTGGGCCCAGTTCTTACCGTTTGAGTTGGGCTTAATTTTTACTGTTTGATGGGCCTAAAATTGGGCCTAGTTCTTACGGATTGAAATTGGGCTTAGTTCTTACTGTTTGAAATTGGGCCTAGTTCTTACCGTTTGAAATTGGGAGTCTAACTCAACCCTAAAATTCTTAGGTTTGAAATTGACCTAATTTTTAGGGTTTGAAATTGGGCCTAGAGATTGGGCTTAATTTTTAAGATGGGCTTAGTTCTTACGGTTTGAAATTGGGCCTAATTCGTTTAAAATTGTTGCTGGCTTAGGGTTTGAAATTGGGCCTAATTCGTTTAAAATTGTTGCTGGCTTAGGGTTTGAAATTGGACCTATTTGAAATTGATCAGGTCCTAATTCTTACGCATAATTTTTGTTTGAAATTGGGGACTCAATCCTAATTCTCAATTTTAAATTGGGAGTGTAACCAACATTATTTCTTACCGTTTGAAATTGGAGGGTCTATAGTCGGGTTATCCGATCACATGAACCCAAATAAATTTAATAAATTTTGTACATTCTTACCAAATAATAATATGAAAGGAATAAACAAAATTGAAAAAAAAAAAAAAAAAAAACTAACCCAACCCTAACCCTAAACCTAACTCCGTTTGAATTTGAAAAAAAAAACTAACCCAACCTTCTCCCTAACTCTTATTTGAAACTAACCCAACCTTCTCCCTAACTCTTATTTGAAACTAACCCAACCCTAATCCTCACACTTACCGTTAACCCAACCCTAATTCGAAACTTACGGTTTGATAGAAAATAATAATATAGAAAGAATAATATTGAATTTAATATTACTTGAAATTACACAGGATAAGGATGAATACGTGGAGATTGCATTTACATTTTAGTTTTATAATGATATCAAATATGTAAAAATATTTATGTTTATTTTATTTTTTCTAAAAATAAAATAAAATAAAATAATTGCAAACTTTGCCACTTAATCTATCAATCTTCTCAAATTTTACCCAAATAAATTCAAATTTTGCAAATAAATCCTTCCATTCTTATCCACGTTTATAAACACTATTTTCACTTTCCTCCATTTATTTTTTAAAATATTTTAAAAAAAATTAACAAAATTTCTTAAATTAGAAAAAATTATAAAAAAAATTAAAAGGCATCAAATTATAATTAAGTTTAATGGATAAAATTAAAAATTAATAATTTTTTAAATGAAATAAATCTAAATAAAATAATATGTTTTTATTTATTTATTTTAATTTATATTTATATTTTCAGTACAATGAGTTGGTTGAGTTGGAATGGCTTGCAAGTTTTGAAGAGGAACCGTTTTCCAGCGAGGATATGCAAAAGCTAGAACTCATCACCGGAGTCAAAGTCAAACCCGACGAGCCACCCCAATCCCACCACCCAACCAACGCGGTCTCCGCCCTCTCTCACGGCCGAAATGCAGCAGCTGCGATCTTCAAACCCGACATTGTAGCGGTTCCGGCGAAGGCCCGGAGCAAACGCTCACGCACCATCCCATCAAATTGGAACAACTCCCGTCTCCTCCCACTTTCTCCGACCAGCTCCTCCTCCGAGCTAGACATCCCGGCCACCGAACCGCCACCGCACCCGGTTAAGAAAGTCCCTCCCAAAGTGGCGGCGACGGCGACGGCGGCGGTGAAGAAAAAAGAATCCTCCTCCTCATCGGAGACCGGAATGTCGGCTGGAGAAGGGCGGAAGTGTATGCACTGTGCCACTGACAAGACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTTTGTAACGCTTGTGGGGTCCGCTACAAATCCGGGCGGCTAGTGCCGGAGTATCGGCCGGCGGCGAGCCCGACATTTGTGCTGACGAAACACTCGAATTCCCACCGGAAAGTGTTGGAGCTCCGACGGCAAAAGGAACTGCAGAAAGCGCAGGAACAGCAGGCGTTGATGATGGATCATCATCACCATCATCACCATCAGGAAATGATGTTTGATTCATCCAACGGTGAGGATTATCTGATGAAGCAAAACGTGGCTCATGATTACCTGCACCTGATCTGA

mRNA sequence

ATGGAAGCTCCCGAATATTTCCACAACAATGCTTACTGCTCCCAATTCACCTCCGACAAAGACGCCGCCGCCGCCACCACCGCCGACCACTTCATCGTCGAAGAGCTTCTCGATTTCTCCAACGACGACGACTCCGCCATTGCCGACTCCGGCGGCTTCTTCAATAACGTCACCTGCTTCTTGAATGGAAACTCCGCTGAATCCTCCGCCGCCACGGCGGTGGAGAGTTCCAATTCCTCCTCCTTTTCAGGTTCTGAACGGACTTCGTTTTTCGACGATGTTTCTGCCTCTTCTTTAGCCGATGTCCGTTTCTCCGACGACATCTTCATTCCGTACAATGAGTTGGTTGAGTTGGAATGGCTTGCAAGTTTTGAAGAGGAACCGTTTTCCAGCGAGGATATGCAAAAGCTAGAACTCATCACCGGAGTCAAAGTCAAACCCGACGAGCCACCCCAATCCCACCACCCAACCAACGCGGTCTCCGCCCTCTCTCACGGCCGAAATGCAGCAGCTGCGATCTTCAAACCCGACATTGTAGCGGTTCCGGCGAAGGCCCGGAGCAAACGCTCACGCACCATCCCATCAAATTGGAACAACTCCCGTCTCCTCCCACTTTCTCCGACCAGCTCCTCCTCCGAGCTAGACATCCCGGCCACCGAACCGCCACCGCACCCGGTTAAGAAAGTCCCTCCCAAAGTGGCGGCGACGGCGACGGCGGCGGTGAAGAAAAAAGAATCCTCCTCCTCATCGGAGACCGGAATGTCGGCTGGAGAAGGGCGGAAGTGTATGCACTGTGCCACTGACAAGACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTTTGTAACGCTTGTGGGGTCCGCTACAAATCCGGGCGGCTAGTGCCGGAGTATCGGCCGGCGGCGAGCCCGACATTTGTGCTGACGAAACACTCGAATTCCCACCGGAAAGTGTTGGAGCTCCGACGGCAAAAGGAACTGCAGAAAGCGCAGGAACAGCAGGCGTTGATGATGGATCATCATCACCATCATCACCATCAGGAAATGATGTTTGATTCATCCAACGGTGAGGATTATCTGATGAAGCAAAACGTGGCTCATGATTACCTGCACCTGATCTGA

Coding sequence (CDS)

ATGGAAGCTCCCGAATATTTCCACAACAATGCTTACTGCTCCCAATTCACCTCCGACAAAGACGCCGCCGCCGCCACCACCGCCGACCACTTCATCGTCGAAGAGCTTCTCGATTTCTCCAACGACGACGACTCCGCCATTGCCGACTCCGGCGGCTTCTTCAATAACGTCACCTGCTTCTTGAATGGAAACTCCGCTGAATCCTCCGCCGCCACGGCGGTGGAGAGTTCCAATTCCTCCTCCTTTTCAGGTTCTGAACGGACTTCGTTTTTCGACGATGTTTCTGCCTCTTCTTTAGCCGATGTCCGTTTCTCCGACGACATCTTCATTCCGTACAATGAGTTGGTTGAGTTGGAATGGCTTGCAAGTTTTGAAGAGGAACCGTTTTCCAGCGAGGATATGCAAAAGCTAGAACTCATCACCGGAGTCAAAGTCAAACCCGACGAGCCACCCCAATCCCACCACCCAACCAACGCGGTCTCCGCCCTCTCTCACGGCCGAAATGCAGCAGCTGCGATCTTCAAACCCGACATTGTAGCGGTTCCGGCGAAGGCCCGGAGCAAACGCTCACGCACCATCCCATCAAATTGGAACAACTCCCGTCTCCTCCCACTTTCTCCGACCAGCTCCTCCTCCGAGCTAGACATCCCGGCCACCGAACCGCCACCGCACCCGGTTAAGAAAGTCCCTCCCAAAGTGGCGGCGACGGCGACGGCGGCGGTGAAGAAAAAAGAATCCTCCTCCTCATCGGAGACCGGAATGTCGGCTGGAGAAGGGCGGAAGTGTATGCACTGTGCCACTGACAAGACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTTTGTAACGCTTGTGGGGTCCGCTACAAATCCGGGCGGCTAGTGCCGGAGTATCGGCCGGCGGCGAGCCCGACATTTGTGCTGACGAAACACTCGAATTCCCACCGGAAAGTGTTGGAGCTCCGACGGCAAAAGGAACTGCAGAAAGCGCAGGAACAGCAGGCGTTGATGATGGATCATCATCACCATCATCACCATCAGGAAATGATGTTTGATTCATCCAACGGTGAGGATTATCTGATGAAGCAAAACGTGGCTCATGATTACCTGCACCTGATCTGA

Homology

[Close]

BLAST of CmoCh12G001980 vs. Swiss-Prot
Match: GAT12_ARATH (GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61
Identity = 166/357 (46.50%), Postives = 213/357 (59.66%), Query Frame = 1


Query: 27  TADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAVESSNSSSFSGSE 86
           T+D  + + L+DFSNDDD          N+V        A+S+  T +  ++SS+FS ++
Sbjct: 11  TSDFAVDDLLVDFSNDDDEE--------NDVV-------ADSTTTTTI--TDSSNFSAAD 70

Query: 87  RTSFFDDVSASSLADVRFSDDIFIPYNELV-ELEWLASFEEEPFSSEDMQKLELITGVKV 146
             SF  DV   +     FS D+ IP ++L  ELEWL++  +E  S ED+ KLELI+G K 
Sbjct: 71  LPSFHGDVQDGT----SFSGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKS 130

Query: 147 KPDEPPQSHHPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPL 206
           +PD    +  P N         N+++ IF  D V+VPAKARSKRSR    NW +  LL  
Sbjct: 131 RPDPKSDTGSPENP--------NSSSPIFTTD-VSVPAKARSKRSRAAACNWASRGLLKE 190

Query: 207 ----SPTSSSSELDIPATEPPPH--PVKKVPPKVAATATAAVKKKESSSSSETGMSAGEG 266
               SP +  + L       PP   P+   P           ++K+  SS E+G    E 
Sbjct: 191 TFYDSPFTGETILSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDVSSPESG--GAEE 250

Query: 267 RKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRK 326
           R+C+HCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVL KHSNSHRK
Sbjct: 251 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRK 310

Query: 327 VLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFD-SSNGEDYLMKQNVAHDYLHLI 376
           V+ELRRQKE+ +A  +      HHHH     M+FD SS+G+DYL+  NV  D+  LI
Sbjct: 311 VMELRRQKEMSRAHHE----FIHHHHGTDTAMIFDVSSDGDDYLIHHNVGPDFRQLI 331

[Close]

BLAST of CmoCh12G001980 vs. Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.6e-54
Identity = 160/370 (43.24%), Postives = 201/370 (54.32%), Query Frame = 1


Query: 25  ATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAVESSNSSSFSG 84
           A   D F+V++LLDFSNDD     D G   N +      +S+  S  T  +SSNSSS   
Sbjct: 12  AGNPDSFVVDDLLDFSNDDGEV--DDG--LNTLP-----DSSTLSTGTLTDSSNSSSL-- 71

Query: 85  SERTSFFDDVSASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLELITGVK 144
                F D    S         D++IP +++ ELEWL++F EE F+ ED  KL L +G+K
Sbjct: 72  -----FTDGTGFS---------DLYIPNDDIAELEWLSNFVEESFAGEDQDKLHLFSGLK 131

Query: 145 VKPDEPPQSHHPTNAVSALSHGRNAAAAIFKPDI-------------VAVPAKARSKRSR 204
                     +P    S L+H       + KP+              VAVPAKARSKRSR
Sbjct: 132 ----------NPQTTGSTLTH-------LIKPEPELDHQFIDIDESNVAVPAKARSKRSR 191

Query: 205 TIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATAAVKKKESSSSSE 264
           +  S W  SRLL L+        D   T P     KK   +V          KE   + +
Sbjct: 192 SAASTWA-SRLLSLA--------DSDETNP-----KKKQRRV----------KEQDFAGD 251

Query: 265 TGMSAGE---GRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 324
             +  GE   GR+C+HCAT+KTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA+SPTF
Sbjct: 252 MDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTF 308

Query: 325 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQN-- 376
           V+ +HSNSHRKV+ELRRQKE++       L  ++        +M   SNGED+LM  N  
Sbjct: 312 VMARHSNSHRKVMELRRQKEMRDEHLLSQLRCEN-------LLMDIRSNGEDFLMHNNTN 308

[Close]

BLAST of CmoCh12G001980 vs. Swiss-Prot
Match: GATA2_ARATH (GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-39
Identity = 123/327 (37.61%), Postives = 160/327 (48.93%), Query Frame = 1


Query: 21  DAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAVESSNSS 80
           D    ++ D   +++LLDFSN+D  + + SGG               S+AAT+     SS
Sbjct: 2   DVYGLSSPDLLRIDDLLDFSNEDIFSASSSGG---------------STAATS-----SS 61

Query: 81  SFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLE-L 140
           SF   +  SF      SS     F  DI +P ++   LEWL+ F ++ F+      L   
Sbjct: 62  SFPPPQNPSFHHHHLPSSADHHSFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPLGGT 121

Query: 141 ITGVKVKPDEPPQSHHPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNN 200
           +T VK +                                 + P K RSKRSR        
Sbjct: 122 MTSVKTE--------------------------------TSFPGKPRSKRSRA------- 181

Query: 201 SRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATAAVKKKESSSSSETGMSAGEG 260
               P     + S + + +     H   K  PK   +           SSS      G  
Sbjct: 182 ----PAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGM 241

Query: 261 RKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRK 320
           R+C HCA++KTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPA+SPTFVLT+HSNSHRK
Sbjct: 242 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRK 262

Query: 321 VLELRRQKELQKAQEQQALMMDHHHHH 347
           V+ELRRQKE+ +  +Q  L   HHHHH
Sbjct: 302 VMELRRQKEVMRQPQQVQL---HHHHH 262

[Close]

BLAST of CmoCh12G001980 vs. Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.7e-31
Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = 1


Query: 204 PLSPTSSSSELDIPATEPPPHPVKKVP-PKVAAT---------ATAAVKKKESSSSSETG 263
           P +P + +   +I  T  P     + P P VA T           +  K K     +   
Sbjct: 92  PANPLTMTVRPEISFTGKPRSRRSRAPAPSVAGTWAPMSESELCHSVAKPKPKKVYNAES 151

Query: 264 MSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 323
           ++A   R+C HCA++KTPQWRTGP+GPKTLCNACGVRYKSGRLVPEYRPA+SPTFVLT+H
Sbjct: 152 VTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQH 211

Query: 324 SNSHRKVLELRRQKELQKA 333
           SNSHRKV+ELRRQKE Q++
Sbjct: 212 SNSHRKVMELRRQKEQQES 230

[Close]

BLAST of CmoCh12G001980 vs. Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30
Identity = 124/328 (37.80%), Postives = 159/328 (48.48%), Query Frame = 1


Query: 15  QFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAV 74
           +F +   A    + D F V++LLD SNDD  A  ++     +    +   S+E       
Sbjct: 25  EFLAVTTAQNGFSVDDFSVDDLLDLSNDDVFADEETDLKAQHEMVRV---SSEEPNDDGD 84

Query: 75  ESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDM 134
               SS FSG +    F  +  S L+         +P ++L  LEWL+ F E+ F+    
Sbjct: 85  ALRRSSDFSGCDD---FGSLPTSELS---------LPADDLANLEWLSHFVEDSFTEYSG 144

Query: 135 QKLELITGVKVKPDEPP-----QSHHPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKR 194
             L   TG    P E P        HP  AV+            FK     VPAKARSKR
Sbjct: 145 PNL---TGT---PTEKPAWLTGDRKHPVTAVTE--------ETCFKSP---VPAKARSKR 204

Query: 195 SRTIPSNWN---NSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATAAVKKKES 254
           +R     W+   +S   P S  S+SS    P++  P     ++   V  +      KK  
Sbjct: 205 NRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSS--PWFSGAELLEPVVTSERPPFPKKHK 264

Query: 255 SSSSETGMSAGE------GRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 314
             S+E+  S GE       RKC HC   KTPQWR GPMG KTLCNACGVRYKSGRL+PEY
Sbjct: 265 KRSAESVFS-GELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEY 317

Query: 315 RPAASPTFVLTKHSNSHRKVLELRRQKE 329
           RPA SPTF    HSN HRKV+E+RR+KE
Sbjct: 325 RPACSPTFSSELHSNHHRKVIEMRRKKE 317

[Close]

BLAST of CmoCh12G001980 vs. TrEMBL
Match: A0A0A0LPR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373450 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.2e-113
Identity = 248/403 (61.54%), Postives = 288/403 (71.46%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTA------DHFIVEELLDFSN-DDDSAIADSGG- 60
           MEAPEYF  NAY SQF+S  DA A TTA      DHFIVEELLDFSN +DD+ + DSGG 
Sbjct: 1   MEAPEYFQINAYSSQFSSPDDADATTTAAAAAAPDHFIVEELLDFSNNEDDAVLTDSGGG 60

Query: 61  ------------FFNNVTCFLN-----GNSAESSAATAVESSNSSSFSGSERTSFFDDVS 120
                       F+NN     N      NS ESSA T +ES NSSS       SFF+D+S
Sbjct: 61  GGGGGGGGGGGLFYNNNNTSTNDHNNNNNSTESSAVTVMESCNSSS-------SFFEDIS 120

Query: 121 ASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLELITGVKVKPDEPP-QSH 180
            S+L D  FS ++ +PY++L ELEWL++F EE FSSEDMQKLELI+GVKVK DEPP QS 
Sbjct: 121 GSNLGDAHFSSELCVPYDDLAELEWLSNFVEESFSSEDMQKLELISGVKVKSDEPPTQSP 180

Query: 181 HPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSEL 240
            PT           +AAAIFKP+IV+VPAKARSKRSR +PSNWNNS LLPLS  ++ SE 
Sbjct: 181 QPT--------ATRSAAAIFKPEIVSVPAKARSKRSRALPSNWNNSALLPLSSPTAESET 240

Query: 241 DIPATEPPPHPVKKVPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWR 300
             P  +P  HP+KK  PK AATA    KKK+S    + G S+GEGRKCMHCATDKTPQWR
Sbjct: 241 TPPIEQP--HPIKKTLPKAAATA----KKKDSP---DLGFSSGEGRKCMHCATDKTPQWR 300

Query: 301 TGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQE 360
           TGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+
Sbjct: 301 TGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEILRAQQ 360

Query: 361 QQA--LMMDHHHHHHHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           QQ   L++D     H Q+M+FD+SNG+DYL+ Q+V  D+  LI
Sbjct: 361 QQPQHLLLD-----HRQDMIFDASNGDDYLIHQHVGPDFRQLI 374

[Close]

BLAST of CmoCh12G001980 vs. TrEMBL
Match: A0A0D2N548_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G288400 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.0e-96
Identity = 218/388 (56.19%), Postives = 263/388 (67.78%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCF 60
           MEAPE+F    YCSQ T +K AA     DHFIVE+LLDFSN+D + I D   F ++V   
Sbjct: 1   MEAPEFFQGTTYCSQLTPEKPAAGG---DHFIVEDLLDFSNED-AVITDVANFNSSVA-- 60

Query: 61  LNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEW 120
             G+S +SS  TAVES NSSSFSG E T+    +   S  D +F+ D+ +PY++L ELEW
Sbjct: 61  --GHSTDSSTITAVESCNSSSFSGPE-TNLGGGIGCRSFTDGQFAGDLCVPYDDLAELEW 120

Query: 121 LASFEEEPFSSEDMQKLELITGVKVKPD---EPP--QSHHPTNAVSALSHGRNAAAAIFK 180
           L++F EE FSSED+QKL+LI+G+K  P+   EP   Q   P    +A+  G      +F 
Sbjct: 121 LSNFAEESFSSEDLQKLQLISGMKTLPNVSSEPRGLQPELPNQIENAIDGGGGDNNHVFH 180

Query: 181 PDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDI-------PATEPPPHPVKK 240
           PD+  VPAKARSKRSR  P NW  SRLL LSPT SS E DI       P+ +P   PVK 
Sbjct: 181 PDMT-VPAKARSKRSRAAPCNWA-SRLLVLSPTVSSPEPDIIVPVQPLPSNQPGKKPVK- 240

Query: 241 VPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACG 300
                  T +++ KKK+       G ++ +GRKC+HCATDKTPQWRTGPMGPKTLCNACG
Sbjct: 241 -------TTSSSSKKKDG------GETSSDGRKCLHCATDKTPQWRTGPMGPKTLCNACG 300

Query: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQE-QQALMMDHHHHHH 360
           VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+  Q   M HHHHHH
Sbjct: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRAQQHHQQQFMHHHHHHH 360

Query: 361 HQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           HQ M+FD SNG+DYL+ Q V  D+  LI
Sbjct: 361 HQNMVFDVSNGDDYLIHQPVGPDFRQLI 363

[Close]

BLAST of CmoCh12G001980 vs. TrEMBL
Match: A0A0B0NEF8_GOSAR (GATA transcription factor 12-like protein OS=Gossypium arboreum GN=F383_02795 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.0e-96
Identity = 218/389 (56.04%), Postives = 263/389 (67.61%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCF 60
           ME P++F   AYCSQ T +K AA     DHFIVE+LLDFSN+D + I D   F ++V   
Sbjct: 1   METPDFFQGTAYCSQLTPEKPAAGG---DHFIVEDLLDFSNED-AVITDVANFNSSVA-- 60

Query: 61  LNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEW 120
             G+S +SS  TAVES NSSSFSG E T+    +   S  D +F+ D+ +PY++L ELEW
Sbjct: 61  --GHSTDSSTVTAVESCNSSSFSGPE-TNLGGGIGCRSFTDGQFAGDLCVPYDDLAELEW 120

Query: 121 LASFEEEPFSSEDMQKLELITGVKVKPD---EPP--QSHHPTNAVSALSHGRNAAAAIFK 180
           L++F EE FSSED+QKL+LI+G+K  P+   EP   Q   P    +A+  G      +F 
Sbjct: 121 LSNFAEESFSSEDLQKLQLISGMKTLPNVSSEPRGLQPELPNQIENAIDGGGGDNNHVFH 180

Query: 181 PDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDI-------PATEPPPHPVKK 240
           PD+  VPAKARSKRSR  P NW  SRLL LSPT SS E DI       P+ +P   PVK 
Sbjct: 181 PDMT-VPAKARSKRSRAAPCNWA-SRLLVLSPTVSSPEPDIIVPVQPLPSNQPGKKPVK- 240

Query: 241 VPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACG 300
                  T +++ KKK+       G ++ +GRKC+HCATDKTPQWRTGPMGPKTLCNACG
Sbjct: 241 -------TTSSSSKKKDG------GETSSDGRKCLHCATDKTPQWRTGPMGPKTLCNACG 300

Query: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQE--QQALMMDHHHHH 360
           VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+  QQ  M  HHHHH
Sbjct: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRAQQHHQQQFMHHHHHHH 360

Query: 361 HHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           HHQ M+FD SNG DYL+ Q V  D+  LI
Sbjct: 361 HHQNMVFDVSNGNDYLIHQPVGPDFRQLI 364

[Close]

BLAST of CmoCh12G001980 vs. TrEMBL
Match: A0A061GK48_THECC (GATA transcription factor 9, putative OS=Theobroma cacao GN=TCM_037205 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.7e-94
Identity = 216/389 (55.53%), Postives = 259/389 (66.58%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCF 60
           MEAPE++  ++YCSQF  +K AA     DHFIVE+LLDFSN+D  A+   G F ++V   
Sbjct: 1   MEAPEFYQGSSYCSQFAPEKPAAG----DHFIVEDLLDFSNED--AVITDGTFDSSVA-- 60

Query: 61  LNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEW 120
             G+S +SS  TAV+S NSSS SG E  +F  D+      D +F+ D+ +PY++L ELEW
Sbjct: 61  -GGHSTDSSTVTAVDSCNSSSLSGCE-PNFEGDMGCRGFTDGQFAGDLCVPYDDLAELEW 120

Query: 121 LASFEEEPFSSEDMQKLELITGVKVKPDEPPQS-----------HHPTNAVSALSHGRNA 180
           L++F EE FSSED+QKL+LI+G+K +PDE  QS           HH         HG N 
Sbjct: 121 LSNFVEESFSSEDLQKLQLISGMKTRPDESSQSGGFQPVITNQMHHVIENGDT-EHGNNN 180

Query: 181 AAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDI--PATEPPP-HPV 240
               F PD+ +VPAKARSKRSR  P NW  SRLL LSPT+SSSE DI  P   PPP HP 
Sbjct: 181 NNPSFHPDM-SVPAKARSKRSRAAPLNWA-SRLLVLSPTTSSSEPDIVVPVQPPPPNHPG 240

Query: 241 KKVPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNA 300
           KK            VK K+       G++  +GRKC+HCATDKTPQWRTGPMGPKTLCNA
Sbjct: 241 KK-----------PVKTKKKDGGEGGGLANSDGRKCLHCATDKTPQWRTGPMGPKTLCNA 300

Query: 301 CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHH 360
           CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ Q         HH
Sbjct: 301 CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMLRAQHQH--QQQFMQHH 360

Query: 361 HHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           HHQ M+FD  NG+DYL+ Q+V  D+  LI
Sbjct: 361 HHQNMVFDVPNGDDYLIHQHVGPDFRQLI 363

[Close]

BLAST of CmoCh12G001980 vs. TrEMBL
Match: A0A067KQS3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07730 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.6e-93
Identity = 211/398 (53.02%), Postives = 267/398 (67.09%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATT------ADHFIVEELLDFSNDDDSAIADSGGFF 60
           MEAPE+++ N +CS F+++K  +  +        DHFIVE+LLDFSN+D + I D G  F
Sbjct: 1   MEAPEFYNQNGFCSPFSNEKHHSLDSKPTGGGGGDHFIVEDLLDFSNED-AVITDGGVAF 60

Query: 61  NNVTCFLNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNE 120
           +NVT    GNS +SS+ T V+S NSSSFSG E      D+ + +LADV+FS D+ +PY++
Sbjct: 61  DNVT----GNSTDSSSVTVVDSCNSSSFSGCEPCFNGGDIGSRNLADVQFSSDLCVPYDD 120

Query: 121 LVELEWLASFEEEPFSSEDMQKLELITGVKVKPDEPPQS--------------HHPTNAV 180
           L ELEWL++F EE FSSED+QKL+LI+G+K +PDE  ++              ++  N V
Sbjct: 121 LAELEWLSNFVEESFSSEDLQKLQLISGIKARPDESSETRNFQPDCNGNDNTNNNNNNDV 180

Query: 181 SALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDI---P 240
            A+++  N    IF P++ +VPAKARSKRSR  P NW  SRLL LSPT++S E +I   P
Sbjct: 181 VAINNNNNP---IFHPEM-SVPAKARSKRSRAAPCNWA-SRLLVLSPTTTSPEPEIIVGP 240

Query: 241 ATEPPPHPVKKVPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGP 300
            T+ P    K +             K       + G   G+GRKC+HCATDKTPQWRTGP
Sbjct: 241 TTQHPSSGKKTI-------------KGTGPKRRDGGDGNGDGRKCLHCATDKTPQWRTGP 300

Query: 301 MGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQA 360
           MGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEL +AQ+QQ 
Sbjct: 301 MGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELLRAQQQQ- 360

Query: 361 LMMDHHHHHHHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
                   HHHQ M+FD SNG+DYL+ Q+V  D+  LI
Sbjct: 361 ---QQQFLHHHQNMVFDVSNGDDYLIHQHVGPDFRQLI 371

[Close]

BLAST of CmoCh12G001980 vs. TAIR10
Match: AT5G25830.1 (AT5G25830.1 GATA transcription factor 12)

HSP 1 Score: 238.4 bits (607), Expect = 7.0e-63
Identity = 166/357 (46.50%), Postives = 213/357 (59.66%), Query Frame = 1


Query: 27  TADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAVESSNSSSFSGSE 86
           T+D  + + L+DFSNDDD          N+V        A+S+  T +  ++SS+FS ++
Sbjct: 11  TSDFAVDDLLVDFSNDDDEE--------NDVV-------ADSTTTTTI--TDSSNFSAAD 70

Query: 87  RTSFFDDVSASSLADVRFSDDIFIPYNELV-ELEWLASFEEEPFSSEDMQKLELITGVKV 146
             SF  DV   +     FS D+ IP ++L  ELEWL++  +E  S ED+ KLELI+G K 
Sbjct: 71  LPSFHGDVQDGT----SFSGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKS 130

Query: 147 KPDEPPQSHHPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPL 206
           +PD    +  P N         N+++ IF  D V+VPAKARSKRSR    NW +  LL  
Sbjct: 131 RPDPKSDTGSPENP--------NSSSPIFTTD-VSVPAKARSKRSRAAACNWASRGLLKE 190

Query: 207 ----SPTSSSSELDIPATEPPPH--PVKKVPPKVAATATAAVKKKESSSSSETGMSAGEG 266
               SP +  + L       PP   P+   P           ++K+  SS E+G    E 
Sbjct: 191 TFYDSPFTGETILSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDVSSPESG--GAEE 250

Query: 267 RKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRK 326
           R+C+HCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVL KHSNSHRK
Sbjct: 251 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRK 310

Query: 327 VLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFD-SSNGEDYLMKQNVAHDYLHLI 376
           V+ELRRQKE+ +A  +      HHHH     M+FD SS+G+DYL+  NV  D+  LI
Sbjct: 311 VMELRRQKEMSRAHHE----FIHHHHGTDTAMIFDVSSDGDDYLIHHNVGPDFRQLI 331

[Close]

BLAST of CmoCh12G001980 vs. TAIR10
Match: AT4G32890.1 (AT4G32890.1 GATA transcription factor 9)

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-55
Identity = 160/370 (43.24%), Postives = 201/370 (54.32%), Query Frame = 1


Query: 25  ATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAVESSNSSSFSG 84
           A   D F+V++LLDFSNDD     D G   N +      +S+  S  T  +SSNSSS   
Sbjct: 12  AGNPDSFVVDDLLDFSNDDGEV--DDG--LNTLP-----DSSTLSTGTLTDSSNSSSL-- 71

Query: 85  SERTSFFDDVSASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLELITGVK 144
                F D    S         D++IP +++ ELEWL++F EE F+ ED  KL L +G+K
Sbjct: 72  -----FTDGTGFS---------DLYIPNDDIAELEWLSNFVEESFAGEDQDKLHLFSGLK 131

Query: 145 VKPDEPPQSHHPTNAVSALSHGRNAAAAIFKPDI-------------VAVPAKARSKRSR 204
                     +P    S L+H       + KP+              VAVPAKARSKRSR
Sbjct: 132 ----------NPQTTGSTLTH-------LIKPEPELDHQFIDIDESNVAVPAKARSKRSR 191

Query: 205 TIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATAAVKKKESSSSSE 264
           +  S W  SRLL L+        D   T P     KK   +V          KE   + +
Sbjct: 192 SAASTWA-SRLLSLA--------DSDETNP-----KKKQRRV----------KEQDFAGD 251

Query: 265 TGMSAGE---GRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 324
             +  GE   GR+C+HCAT+KTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA+SPTF
Sbjct: 252 MDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTF 308

Query: 325 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQN-- 376
           V+ +HSNSHRKV+ELRRQKE++       L  ++        +M   SNGED+LM  N  
Sbjct: 312 VMARHSNSHRKVMELRRQKEMRDEHLLSQLRCEN-------LLMDIRSNGEDFLMHNNTN 308

[Close]

BLAST of CmoCh12G001980 vs. TAIR10
Match: AT2G45050.1 (AT2G45050.1 GATA transcription factor 2)

HSP 1 Score: 165.2 bits (417), Expect = 7.6e-41
Identity = 123/327 (37.61%), Postives = 160/327 (48.93%), Query Frame = 1


Query: 21  DAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAVESSNSS 80
           D    ++ D   +++LLDFSN+D  + + SGG               S+AAT+     SS
Sbjct: 2   DVYGLSSPDLLRIDDLLDFSNEDIFSASSSGG---------------STAATS-----SS 61

Query: 81  SFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLE-L 140
           SF   +  SF      SS     F  DI +P ++   LEWL+ F ++ F+      L   
Sbjct: 62  SFPPPQNPSFHHHHLPSSADHHSFLHDICVPSDDAAHLEWLSQFVDDSFADFPANPLGGT 121

Query: 141 ITGVKVKPDEPPQSHHPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNN 200
           +T VK +                                 + P K RSKRSR        
Sbjct: 122 MTSVKTE--------------------------------TSFPGKPRSKRSRA------- 181

Query: 201 SRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATAAVKKKESSSSSETGMSAGEG 260
               P     + S + + +     H   K  PK   +           SSS      G  
Sbjct: 182 ----PAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGGGGGRHQSSSSETTEGGGM 241

Query: 261 RKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRK 320
           R+C HCA++KTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPA+SPTFVLT+HSNSHRK
Sbjct: 242 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRK 262

Query: 321 VLELRRQKELQKAQEQQALMMDHHHHH 347
           V+ELRRQKE+ +  +Q  L   HHHHH
Sbjct: 302 VMELRRQKEVMRQPQQVQL---HHHHH 262

[Close]

BLAST of CmoCh12G001980 vs. TAIR10
Match: AT3G60530.1 (AT3G60530.1 GATA transcription factor 4)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-32
Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = 1


Query: 204 PLSPTSSSSELDIPATEPPPHPVKKVP-PKVAAT---------ATAAVKKKESSSSSETG 263
           P +P + +   +I  T  P     + P P VA T           +  K K     +   
Sbjct: 92  PANPLTMTVRPEISFTGKPRSRRSRAPAPSVAGTWAPMSESELCHSVAKPKPKKVYNAES 151

Query: 264 MSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 323
           ++A   R+C HCA++KTPQWRTGP+GPKTLCNACGVRYKSGRLVPEYRPA+SPTFVLT+H
Sbjct: 152 VTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQH 211

Query: 324 SNSHRKVLELRRQKELQKA 333
           SNSHRKV+ELRRQKE Q++
Sbjct: 212 SNSHRKVMELRRQKEQQES 230

[Close]

BLAST of CmoCh12G001980 vs. TAIR10
Match: AT5G66320.1 (AT5G66320.1 GATA transcription factor 5)

HSP 1 Score: 135.2 bits (339), Expect = 8.4e-32
Identity = 124/328 (37.80%), Postives = 159/328 (48.48%), Query Frame = 1


Query: 15  QFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCFLNGNSAESSAATAV 74
           +F +   A    + D F V++LLD SNDD  A  ++     +    +   S+E       
Sbjct: 25  EFLAVTTAQNGFSVDDFSVDDLLDLSNDDVFADEETDLKAQHEMVRV---SSEEPNDDGD 84

Query: 75  ESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDM 134
               SS FSG +    F  +  S L+         +P ++L  LEWL+ F E+ F+    
Sbjct: 85  ALRRSSDFSGCDD---FGSLPTSELS---------LPADDLANLEWLSHFVEDSFTEYSG 144

Query: 135 QKLELITGVKVKPDEPP-----QSHHPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKR 194
             L   TG    P E P        HP  AV+            FK     VPAKARSKR
Sbjct: 145 PNL---TGT---PTEKPAWLTGDRKHPVTAVTE--------ETCFKSP---VPAKARSKR 204

Query: 195 SRTIPSNWN---NSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATAAVKKKES 254
           +R     W+   +S   P S  S+SS    P++  P     ++   V  +      KK  
Sbjct: 205 NRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSS--PWFSGAELLEPVVTSERPPFPKKHK 264

Query: 255 SSSSETGMSAGE------GRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 314
             S+E+  S GE       RKC HC   KTPQWR GPMG KTLCNACGVRYKSGRL+PEY
Sbjct: 265 KRSAESVFS-GELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEY 317

Query: 315 RPAASPTFVLTKHSNSHRKVLELRRQKE 329
           RPA SPTF    HSN HRKV+E+RR+KE
Sbjct: 325 RPACSPTFSSELHSNHHRKVIEMRRKKE 317

[Close]

BLAST of CmoCh12G001980 vs. NCBI nr
Match: gi|700207683|gb|KGN62802.1| (hypothetical protein Csa_2G373450 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 3.1e-113
Identity = 248/403 (61.54%), Postives = 288/403 (71.46%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTA------DHFIVEELLDFSN-DDDSAIADSGG- 60
           MEAPEYF  NAY SQF+S  DA A TTA      DHFIVEELLDFSN +DD+ + DSGG 
Sbjct: 1   MEAPEYFQINAYSSQFSSPDDADATTTAAAAAAPDHFIVEELLDFSNNEDDAVLTDSGGG 60

Query: 61  ------------FFNNVTCFLN-----GNSAESSAATAVESSNSSSFSGSERTSFFDDVS 120
                       F+NN     N      NS ESSA T +ES NSSS       SFF+D+S
Sbjct: 61  GGGGGGGGGGGLFYNNNNTSTNDHNNNNNSTESSAVTVMESCNSSS-------SFFEDIS 120

Query: 121 ASSLADVRFSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLELITGVKVKPDEPP-QSH 180
            S+L D  FS ++ +PY++L ELEWL++F EE FSSEDMQKLELI+GVKVK DEPP QS 
Sbjct: 121 GSNLGDAHFSSELCVPYDDLAELEWLSNFVEESFSSEDMQKLELISGVKVKSDEPPTQSP 180

Query: 181 HPTNAVSALSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSEL 240
            PT           +AAAIFKP+IV+VPAKARSKRSR +PSNWNNS LLPLS  ++ SE 
Sbjct: 181 QPT--------ATRSAAAIFKPEIVSVPAKARSKRSRALPSNWNNSALLPLSSPTAESET 240

Query: 241 DIPATEPPPHPVKKVPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWR 300
             P  +P  HP+KK  PK AATA    KKK+S    + G S+GEGRKCMHCATDKTPQWR
Sbjct: 241 TPPIEQP--HPIKKTLPKAAATA----KKKDSP---DLGFSSGEGRKCMHCATDKTPQWR 300

Query: 301 TGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQE 360
           TGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+
Sbjct: 301 TGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEILRAQQ 360

Query: 361 QQA--LMMDHHHHHHHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           QQ   L++D     H Q+M+FD+SNG+DYL+ Q+V  D+  LI
Sbjct: 361 QQPQHLLLD-----HRQDMIFDASNGDDYLIHQHVGPDFRQLI 374

[Close]

BLAST of CmoCh12G001980 vs. NCBI nr
Match: gi|778674365|ref|XP_011650196.1| (PREDICTED: GATA transcription factor 12-like [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 4.1e-113
Identity = 247/391 (63.17%), Postives = 286/391 (73.15%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTA------DHFIVEELLDFSN-DDDSAIADSGGF 60
           MEAPEYF  NAY SQF+S  DA A TTA      DHFIVEELLDFSN +DD+ + DSGG 
Sbjct: 1   MEAPEYFQINAYSSQFSSPDDADATTTAAAAAAPDHFIVEELLDFSNNEDDAVLTDSGGG 60

Query: 61  ------FNNVTCFLNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDD 120
                  NN     N NS ESSA T +ES NSSS       SFF+D+S S+L D  FS +
Sbjct: 61  GGGGNDHNN-----NNNSTESSAVTVMESCNSSS-------SFFEDISGSNLGDAHFSSE 120

Query: 121 IFIPYNELVELEWLASFEEEPFSSEDMQKLELITGVKVKPDEPP-QSHHPTNAVSALSHG 180
           + +PY++L ELEWL++F EE FSSEDMQKLELI+GVKVK DEPP QS  PT         
Sbjct: 121 LCVPYDDLAELEWLSNFVEESFSSEDMQKLELISGVKVKSDEPPTQSPQPT--------A 180

Query: 181 RNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPV 240
             +AAAIFKP+IV+VPAKARSKRSR +PSNWNNS LLPLS  ++ SE   P  +P  HP+
Sbjct: 181 TRSAAAIFKPEIVSVPAKARSKRSRALPSNWNNSALLPLSSPTAESETTPPIEQP--HPI 240

Query: 241 KKVPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNA 300
           KK  PK AATA    KKK+S    + G S+GEGRKCMHCATDKTPQWRTGPMGPKTLCNA
Sbjct: 241 KKTLPKAAATA----KKKDSP---DLGFSSGEGRKCMHCATDKTPQWRTGPMGPKTLCNA 300

Query: 301 CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQA--LMMDHHH 360
           CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+QQ   L++D   
Sbjct: 301 CGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEILRAQQQQPQHLLLD--- 357

Query: 361 HHHHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
             H Q+M+FD+SNG+DYL+ Q+V  D+  LI
Sbjct: 361 --HRQDMIFDASNGDDYLIHQHVGPDFRQLI 357

[Close]

BLAST of CmoCh12G001980 vs. NCBI nr
Match: gi|659088475|ref|XP_008445001.1| (PREDICTED: GATA transcription factor 12-like [Cucumis melo])

HSP 1 Score: 402.5 bits (1033), Expect = 8.0e-109
Identity = 242/393 (61.58%), Postives = 285/393 (72.52%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTA----DHFIVEELLDFSNDDDSAI-ADSGG--- 60
           MEAPEYF  NAY SQF+S   A A+TTA    +HFIVEELLDFSN++D A+  D+GG   
Sbjct: 1   MEAPEYFQINAYSSQFSSPDHADASTTAAAAPEHFIVEELLDFSNNEDDAVFTDAGGGGG 60

Query: 61  ----FFNNVTCFLN-----GNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVR 120
               F+NN     N      NSAESSA T +ES NSSS       SFF+D+S S+L D  
Sbjct: 61  GGGLFYNNNNTTSNDHNNNNNSAESSAITVMESCNSSS-------SFFEDISGSNLGDAH 120

Query: 121 FSDDIFIPYNELVELEWLASFEEEPFSSEDMQKLELITGVKVKPDE-PPQSHHPTNAVSA 180
           FS ++ +PY++L ELEWL++F EE FSSEDMQKLEL++GVKVK DE P QS  PT     
Sbjct: 121 FSSELCVPYDDLAELEWLSNFVEESFSSEDMQKLELLSGVKVKSDEIPAQSPQPT----- 180

Query: 181 LSHGRNAAAAIFKPDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDIPATEPP 240
                  AAAIFKP+IV+VPAKARSKRSR +PSNWNNS LLPLSPT+   E +I A    
Sbjct: 181 ---ATRTAAAIFKPEIVSVPAKARSKRSRALPSNWNNSSLLPLSPTA---EPEITAPIGQ 240

Query: 241 PHPVKKVPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKT 300
           P+ +KK  PKVAATA    KKK++    + G S+GEGRKCMHCATDKTPQWRTGPMGPKT
Sbjct: 241 PYSIKKPLPKVAATA----KKKDNP---DVGFSSGEGRKCMHCATDKTPQWRTGPMGPKT 300

Query: 301 LCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDH 360
           LCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+QQ     H
Sbjct: 301 LCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEILRAQQQQ---QQH 360

Query: 361 HHHHHHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
               H Q+M+FD+SNG+DYL+ Q+V  D+  +I
Sbjct: 361 LLLDHRQDMIFDASNGDDYLIHQHVGPDFRQMI 365

[Close]

BLAST of CmoCh12G001980 vs. NCBI nr
Match: gi|823154863|ref|XP_012477314.1| (PREDICTED: GATA transcription factor 12-like [Gossypium raimondii])

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-95
Identity = 218/388 (56.19%), Postives = 263/388 (67.78%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCF 60
           MEAPE+F    YCSQ T +K AA     DHFIVE+LLDFSN+D + I D   F ++V   
Sbjct: 1   MEAPEFFQGTTYCSQLTPEKPAAGG---DHFIVEDLLDFSNED-AVITDVANFNSSVA-- 60

Query: 61  LNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEW 120
             G+S +SS  TAVES NSSSFSG E T+    +   S  D +F+ D+ +PY++L ELEW
Sbjct: 61  --GHSTDSSTITAVESCNSSSFSGPE-TNLGGGIGCRSFTDGQFAGDLCVPYDDLAELEW 120

Query: 121 LASFEEEPFSSEDMQKLELITGVKVKPD---EPP--QSHHPTNAVSALSHGRNAAAAIFK 180
           L++F EE FSSED+QKL+LI+G+K  P+   EP   Q   P    +A+  G      +F 
Sbjct: 121 LSNFAEESFSSEDLQKLQLISGMKTLPNVSSEPRGLQPELPNQIENAIDGGGGDNNHVFH 180

Query: 181 PDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDI-------PATEPPPHPVKK 240
           PD+  VPAKARSKRSR  P NW  SRLL LSPT SS E DI       P+ +P   PVK 
Sbjct: 181 PDMT-VPAKARSKRSRAAPCNWA-SRLLVLSPTVSSPEPDIIVPVQPLPSNQPGKKPVK- 240

Query: 241 VPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACG 300
                  T +++ KKK+       G ++ +GRKC+HCATDKTPQWRTGPMGPKTLCNACG
Sbjct: 241 -------TTSSSSKKKDG------GETSSDGRKCLHCATDKTPQWRTGPMGPKTLCNACG 300

Query: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQE-QQALMMDHHHHHH 360
           VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+  Q   M HHHHHH
Sbjct: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRAQQHHQQQFMHHHHHHH 360

Query: 361 HQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           HQ M+FD SNG+DYL+ Q V  D+  LI
Sbjct: 361 HQNMVFDVSNGDDYLIHQPVGPDFRQLI 363

[Close]

BLAST of CmoCh12G001980 vs. NCBI nr
Match: gi|728830756|gb|KHG10199.1| (GATA transcription factor 12 -like protein [Gossypium arboreum])

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-95
Identity = 218/389 (56.04%), Postives = 263/389 (67.61%), Query Frame = 1


Query: 1   MEAPEYFHNNAYCSQFTSDKDAAAATTADHFIVEELLDFSNDDDSAIADSGGFFNNVTCF 60
           ME P++F   AYCSQ T +K AA     DHFIVE+LLDFSN+D + I D   F ++V   
Sbjct: 1   METPDFFQGTAYCSQLTPEKPAAGG---DHFIVEDLLDFSNED-AVITDVANFNSSVA-- 60

Query: 61  LNGNSAESSAATAVESSNSSSFSGSERTSFFDDVSASSLADVRFSDDIFIPYNELVELEW 120
             G+S +SS  TAVES NSSSFSG E T+    +   S  D +F+ D+ +PY++L ELEW
Sbjct: 61  --GHSTDSSTVTAVESCNSSSFSGPE-TNLGGGIGCRSFTDGQFAGDLCVPYDDLAELEW 120

Query: 121 LASFEEEPFSSEDMQKLELITGVKVKPD---EPP--QSHHPTNAVSALSHGRNAAAAIFK 180
           L++F EE FSSED+QKL+LI+G+K  P+   EP   Q   P    +A+  G      +F 
Sbjct: 121 LSNFAEESFSSEDLQKLQLISGMKTLPNVSSEPRGLQPELPNQIENAIDGGGGDNNHVFH 180

Query: 181 PDIVAVPAKARSKRSRTIPSNWNNSRLLPLSPTSSSSELDI-------PATEPPPHPVKK 240
           PD+  VPAKARSKRSR  P NW  SRLL LSPT SS E DI       P+ +P   PVK 
Sbjct: 181 PDMT-VPAKARSKRSRAAPCNWA-SRLLVLSPTVSSPEPDIIVPVQPLPSNQPGKKPVK- 240

Query: 241 VPPKVAATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACG 300
                  T +++ KKK+       G ++ +GRKC+HCATDKTPQWRTGPMGPKTLCNACG
Sbjct: 241 -------TTSSSSKKKDG------GETSSDGRKCLHCATDKTPQWRTGPMGPKTLCNACG 300

Query: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQE--QQALMMDHHHHH 360
           VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE+ +AQ+  QQ  M  HHHHH
Sbjct: 301 VRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRAQQHHQQQFMHHHHHHH 360

Query: 361 HHQEMMFDSSNGEDYLMKQNVAHDYLHLI 376
           HHQ M+FD SNG DYL+ Q V  D+  LI
Sbjct: 361 HHQNMVFDVSNGNDYLIHQPVGPDFRQLI 364

The following BLAST results are available for this feature:

BLAST of CmoCh12G001980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GAT12_ARATH	1.2e-61	46.50	GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1	[more]
GATA9_ARATH	5.6e-54	43.24	GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1	[more]
GATA2_ARATH	1.3e-39	37.61	GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1	[more]
GATA4_ARATH	6.7e-31	53.96	GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1	[more]
GATA5_ARATH	1.5e-30	37.80	GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1	[more]

BLAST of CmoCh12G001980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPR5_CUCSA	2.2e-113	61.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373450 PE=4 SV=1	[more]
A0A0D2N548_GOSRA	7.0e-96	56.19	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G288400 PE=4 SV=1	[more]
A0A0B0NEF8_GOSAR	7.0e-96	56.04	GATA transcription factor 12-like protein OS=Gossypium arboreum GN=F383_02795 PE...	[more]
A0A061GK48_THECC	1.7e-94	55.53	GATA transcription factor 9, putative OS=Theobroma cacao GN=TCM_037205 PE=4 SV=1	[more]
A0A067KQS3_JATCU	5.6e-93	53.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07730 PE=4 SV=1	[more]

BLAST of CmoCh12G001980 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25830.1	7.0e-63	46.50	GATA transcription factor 12	[more]
AT4G32890.1	3.2e-55	43.24	GATA transcription factor 9	[more]
AT2G45050.1	7.6e-41	37.61	GATA transcription factor 2	[more]
AT3G60530.1	3.8e-32	53.96	GATA transcription factor 4	[more]
AT5G66320.1	8.4e-32	37.80	GATA transcription factor 5	[more]

BLAST of CmoCh12G001980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207683\|gb\|KGN62802.1\|	3.1e-113	61.54	hypothetical protein Csa_2G373450 [Cucumis sativus]	[more]
gi\|778674365\|ref\|XP_011650196.1\|	4.1e-113	63.17	PREDICTED: GATA transcription factor 12-like [Cucumis sativus]	[more]
gi\|659088475\|ref\|XP_008445001.1\|	8.0e-109	61.58	PREDICTED: GATA transcription factor 12-like [Cucumis melo]	[more]
gi\|823154863\|ref\|XP_012477314.1\|	1.0e-95	56.19	PREDICTED: GATA transcription factor 12-like [Gossypium raimondii]	[more]
gi\|728830756\|gb\|KHG10199.1\|	1.0e-95	56.04	GATA transcription factor 12 -like protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000679	Znf_GATA
IPR013088	Znf_NHR/GATA
IPR016679	TF_GATA_pln

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0008270	zinc ion binding
GO:0043565	sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0045893	positive regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0030154	cell differentiation
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function	GO:0001085	RNA polymerase II transcription factor binding
molecular_function	GO:0001228	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G001980.1	CmoCh12G001980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 262..296 score: 7.9
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 256..306 score: 7.5
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 262..287 scor
IPR000679	Zinc finger, GATA-type	PROFILE	PS50114	GATA_ZN_FINGER_2	coord: 256..292 score: 12
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 255..293 score: 4.2
IPR016679	Transcription factor, GATA, plant	PIR	PIRSF016992	Txn_fac_GATA_plant	coord: 13..352 score: 3.0
None	No IPR available	PANTHER	PTHR10071	TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR	coord: 1..373 score: 1.2E
None	No IPR available	PANTHER	PTHR10071:SF196	SUBFAMILY NOT NAMED	coord: 1..373 score: 1.2E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 258..320 score: 1.62

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G001980	Cucsa.161160	Cucumber (Gy14) v1	cgycmoB0448
CmoCh12G001980	Cucsa.312530	Cucumber (Gy14) v1	cgycmoB0854
CmoCh12G001980	CmaCh09G006330	Cucurbita maxima (Rimu)	cmacmoB034
CmoCh12G001980	CmaCh12G002430	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G001980	CmaCh05G005840	Cucurbita maxima (Rimu)	cmacmoB767
CmoCh12G001980	Cla023109	Watermelon (97103) v1	cmowmB161
CmoCh12G001980	Cla022200	Watermelon (97103) v1	cmowmB134
CmoCh12G001980	Csa2G373450	Cucumber (Chinese Long) v2	cmocuB149
CmoCh12G001980	Csa3G895650	Cucumber (Chinese Long) v2	cmocuB164
CmoCh12G001980	MELO3C011130	Melon (DHL92) v3.5.1	cmomeB151
CmoCh12G001980	ClCG11G015130	Watermelon (Charleston Gray)	cmowcgB129
CmoCh12G001980	ClCG08G012130	Watermelon (Charleston Gray)	cmowcgB161
CmoCh12G001980	CSPI02G22120	Wild cucumber (PI 183967)	cmocpiB150
CmoCh12G001980	CSPI03G46080	Wild cucumber (PI 183967)	cmocpiB167
CmoCh12G001980	Lsi08G010740	Bottle gourd (USVL1VR-Ls)	cmolsiB175
CmoCh12G001980	Lsi04G023280	Bottle gourd (USVL1VR-Ls)	cmolsiB159
CmoCh12G001980	Cp4.1LG11g05190	Cucurbita pepo (Zucchini)	cmocpeB148
CmoCh12G001980	Cp4.1LG07g02390	Cucurbita pepo (Zucchini)	cmocpeB174
CmoCh12G001980	MELO3C011130.2	Melon (DHL92) v3.6.1	cmomedB167
CmoCh12G001980	MELO3C003466.2	Melon (DHL92) v3.6.1	cmomedB175
CmoCh12G001980	CsaV3_3G048530	Cucumber (Chinese Long) v3	cmocucB0195
CmoCh12G001980	CsaV3_2G030750	Cucumber (Chinese Long) v3	cmocucB0176
CmoCh12G001980	Cla97C11G221130	Watermelon (97103) v2	cmowmbB151
CmoCh12G001980	Cla97C08G155280	Watermelon (97103) v2	cmowmbB178
CmoCh12G001980	Bhi09G002173	Wax gourd	cmowgoB0218
CmoCh12G001980	Bhi04G000711	Wax gourd	cmowgoB0205
CmoCh12G001980	CsGy3G043580	Cucumber (Gy14) v2	cgybcmoB274
CmoCh12G001980	CsGy2G021850	Cucumber (Gy14) v2	cgybcmoB160
CmoCh12G001980	Carg03042	Silver-seed gourd	carcmoB0868
CmoCh12G001980	Carg03833	Silver-seed gourd	carcmoB1310

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G001980	CmoCh09G006150	Cucurbita moschata (Rifu)	cmocmoB005
CmoCh12G001980	CmoCh05G006090	Cucurbita moschata (Rifu)	cmocmoB151

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G001980	Silver-seed gourd	carcmoB0078
CmoCh12G001980	Melon (DHL92) v3.5.1	cmomeB159