CmoCh12G001940 (gene) Cucurbita moschata (Rifu)

NameCmoCh12G001940
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr12 : 1262577 .. 1268004 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGGATTCCGATTGCTCTATTAGAACTTCAACAATGGCCTCATGGAGTTCGTCTATTTGCTATGAGGTATGCGTTTCTGAATTTCCATTCAATGTTTACCGAACTTCGTATCAGATTGGCTTGTATGTTTTGGTTTCATGCCGGTAAAATTTTGTGGATTTCTCAGGAGGAATTCGAAGAGAATGCGTTTGATAGTCAATCTCGACTTTCAATAAACACTGTTAGAGGCGGTTTCCATCCTGTCGTAGTGCTACGCCAGCTTAATCTGCTGCGCCAAGTAATTTCCCATTCTACCAGACTGCTTATTAACTTAGAACTTGATTTGTTAGTTTAGATTTGAAGTATTACTGGATGACGAAGTATTTTAATTGCGTGTTTGCTTAATTTACAGGATTTAGTGTTGGTAATGATATGAATTCTTGCTTTAACTAAAATGTATAATGGGAGTTCGGCAATGTTGATGATGTTATCTACATGGAAATCGAAAAATGTTGGCGGCATTTTATGTTAAAAAGCTTTAGGAAACATAAGATGGTTGATGTCGATTTGTTTGGACCTCAAATAGGAACGGGCAGCCTCTTGGAGGCCAAGACTAACTGTTGACAAAAAGGAAAAAAGTAGAGAAGATTTAGAGCCTGAAGTTTATAGGAATAGTAGAGACAACAGTCCGCATGACGTTCAATTTTCTTTTGCAATTGCCATGGTGATTCAGTTACTGTGTCTGTATAAGTTTGGTGCCATCCATCTTCTATTCAGTAAACATTTTGTTCATCACCTAATTACTATGGTATTTTTTAAGATTGATTTATATAATTTATGAATCAAATGAAAAAGAACTATCTTAACGGCATTGTTTTAATAGTCAGCTGAAGTGAAGACAACCACGTCCAAAACTGTTGCTCCCCCTCCCCTGTCCTGCCACTTATGACATTAAGAGCTCCAAGGATTTCAAATAGTTTTCATTGCCCAAGTTATGCAGTTGGTCGAGCAGCATACTGATAGAAATGCAAATGATCTAATTTTAGGTTAGGCTTGACTATTTGTTTCTAATTATTTCCAAAAGGCTCTGAGAAAACAAGTTTCATAACATAAATCTTCCATTGTTCCTACGATATGTATATGCATGTTTAATTAGTCTCGTGAGTAAATACAGCTCTGATGATGCAGCCATCAAAAGCTGGTCTTAAGGAGTTATAGGTTGATGGTACAAAATCATTGATAAAATGTTGACGTCATGGGGTATTTTAAGGAAATCTGAAAAATTAAAAAAATCATATAAATTTGTTGAAGCATTAAACAAATCATATAAATTTGTTGAAGCTAGTTGGATCAATTATAAAATTTTAACATCCGTTTTGAGTAAAGATATATCTTTTGAATTACTCTACAAAGACATTGCACTACATGGACTCTTTCTCCTTCCATCTGCTGCTTATGTAGAAAGGAGAAGATTCTTTAGATCACCCGCTGTTACACTGTCCTTTTGTGGCTAAGAGTCGGTCTTTTATTTTGAAGGAATTTGGGCTTTCAATCTGCCTCCCTAAGAAGGTTGAAGATTGATTGCTGGAAACTCTGATGGAGATGAGATTTAGTGGAAAGGCAAGAATTTAATGGTGCTATACAGTGGAAGCTACCCTACGGGTGACTTGGAAAGAGAGGAACCTTAGAATGTCTGAGGATAAGTTAAGTTCAGAGGATTCTTTTATTTATAGTATATAACACTTAGCCTCGCGGTGGAACACAGTTCACAAAGAGTTTTAGTGTAGTTATACCCTTATCATGACTATTAGAAATTGGAAGGCCTTATTGGGTTAGTCTTTTGTTGGGAGGAGTTCCCTCTATGTTGTAAAATGTTGTAGAATCAATTTGCACTTATGAAATCAGTCGTGTTGCATATAAGCTAATCCAAACACCTAGCCATAATAATAATGCTATACATATATATAACACTTAGAATGTCTGAGGATAAGTTAAGTTCAGAGGATTCTTTTATTTATAGTATATAACACTTAGCCTCGTGGTGGAACTCAGGTCACAAAGAGTTTTAGTGTAGTTATACCCTTATCATGACTATTAGAAATTGGAAGGCCTTATTGGGTTAGTCTTTTGTTGGGAGGAGTTCCCTCTACCCCTTGCCCTTTGGCTATCTTCTCTTTATTTTGTGTATAATATCTCTATCTTAGTTTGTTATGTTAAGTCTTGATTGTCACCTGTCTGATCTATGCATATCAGCTTATGTGGTGAGTTTTTGCCTCTAAATGTTGTAGAATCAAATTGCACTTATGAAATCAGTCGTGTTGCATATAAGCTAATCCAAACACCTAGCCATAATAATAATGCTATACATATATATAACACTGTAATCACGATGCTGATAATAGTTCTAACATGATTATCTCCCTCTTTATTATTTATCGATTTGCATCATGCAACTTGTGCTTTGTAACAAGGGGTGACATTTCTGTTACCATTGCCGCTATTTTGGATTCTTACAAAACAAATTATGTTTGATTCCGCTTACATGGTTGATATTTAGTTTGAAGGTGCTCCAGAAGTTGCAAAAAGTTGTGGATGCTACCAATAATTTCCATGATGCTGCTAGATTCTAGTGGGATGAGCAGAATAAATTCTTAAGGAATAATAAGGAACGATCAATATAATAGTAAAACTAAAGTTTACTTTTGGATTTTTTATCGTCCCCCACAAGTTTTGGAGTCTTACCAGTGAGAATATAGTTGATTGAGAAAGAAAACATTCCTTAGAGAGACCTCACAGATTATTTTATAATGCCTCCATCTCTCCTTCAATGGTACAGGATTTATGCTTTCTGTTCTTAGCATGGGATTTTATATTCCTTACCTAATGATTTTGGTTTATTATATTTTTTCAGATCAGAGCTTATCTCTTTTTCAGCATTTACACGCGAACAAAATTTTCTTTGGCACATAATTGGATGTAAGGCGCCAGTGAAAATAATTTTTAATTAGTATGCTTAGTGTGGGCTGTGGTATGTGAGTCCATATTACGTGACATGAGGGGCACAGCTGCAGAAGCTTTATGGTTAAAACCATTGGCCTATGAAATATTTTTCTTCCTTCCATCATTTTGCAGCTACAGCACAAACGTGAACAATATATGTGATTGGGTAGGGGATATTTATGAGGTGGGTACGTGTATTTTTCGTGGGGTGATGGAAAACTAAAAAGGTGGCACCCTTTTTGCTTAGATATTATTGAGGTCCCAGATAAAATCTTCTCCCCTATTTTTCTTTTTATTGTAGTCCTGTCACAACATGCATTTATTTATAAACAAATGCTATAATACGTGTCGGGTTTATCATATCCTTGCTGGGATCTTATCAGTTTTGGGAGATAGATAATGCAGAATATCGACCCCTTCTGTTAAGAAAGAAGGGGGGAAATGCATAAATTCATATTCTCAATCTCATTCGGTGCACCCACTTCTTTTGCAAAGCAGGGTGTGTGACCACACATTTTCAAAATTTACCCCAGACACCAGAAGATGTCAATCGCGCAGCAACAATCGACAGCGAGAGGCATGTAGGGGACCATGATCTGCTGGCCTCAGGGTAACATTCTATTTCAATCGCTTTTCCTCCTTGTAGCTCCTTCATTCATTATCTTCTGTTGTTTTTGCCTGCAAGTTGTGTTAACCACAATTATCAAGAATCTATGAATTATTGGAACAATCAGTCTTCAAGAAAAGGGCGTTTGTTGTACATATTTGACGAATTGACTATTTATATAGGAGCATTTTTTTTTTCAATTTCTTAGCCAGATTGTAAATCATGCTTTGTGTTTAATGGATGGGGTGTTTCCAAATTGGATCCCTTCATTCCTGGGGAGAGTTCAGGCCTCTCGAAGTGCTTGGAGTTCGATATTAGTCTTTCTTATTATCAGAATACAATTTTAATGTTATTTTCTATCAATTTCCATTGCAAGATTGGTTTCCTATCATTCACAAAGAAGCGCATCTATTAGTCCCAGAAAGGTGCTTATGAACGAGTGAGAGAAGAAAGTCTCTTATATCCTAGCCACCAAAAATTGTAGGCATAAATTTTGGTGCATTAGATTGCTTTTCCATTTTCACGAACCAAGTGATTTCTGATCATGATAAGATTCCTCGACTCCTATTCGCACACAGTATTTGGACCGTTTGCTTGTTCAGTGTTGTCACAAATAATTAACAGATTAACAGGATGACTATGACTCCCTTTCTTTCACATGCAAACTCTTGGAGATTTTATATGAAAAAAGAGGCGATTCCTCATTTGGAATCTTTCTGTTTTTGGTGAATTATTGATGTTCAGAGCGATCCTTTTAATATGGGATTTCTAGGAGTTTCTCCCGAAAAAAATCTGCTGCAGTTTGTGTAACATTATCCCTAAAAGCACCTGCTTCCTAGTACTTATCATTTAGAATCTTCAATCACTTAGTTACGTATTTCTTATAAGCATGTTAGCATTTGACACGTAAGTTGCAGCCCTTTCTTTCTTTTCCCTCCTTTATCCATTGTGTTTGGATTGTTCTTATAAATGTTCTTTTCAATAAATTGATTGAATCATCACTTTTTGGTTTCGCTGTGGCTTAAAGAGAATGAGCACATAAATTATAGCATATGGCATTCAAATTGCAATGGCAAAACAAGAGAACTTAGTGATGATAATGATAAATTCTTGTGCAACCCAACTTAGTGATGATAAATTCTTTTGCGTCCCAACTTAGTGATGATAACTTCTTTGCGTTCTATCTTATACTTCTTCCACATGCTAGCCTATAAATACCTTCGTTTGGCATATTGTTGTATCATTCAAAGAAGTCAAGACACTTGAACCTAGTTCCCAGCTCGTCTATCATTATTTCCATCAAATCTGCTACATTTTCTGGGGAGAGAGATGGACTCTAGCCTTTTGCAACGTCAAGTTGCCTACACGAAGAGGTGCTTCTTTGAGCAGGTTTACCTTCAAAATACAAGAAATTCTTTCACTTTTCTTGTGTCTTTCTCATGGTGCAGTTGGCACTCTTAACAGTCTAACTTGTACTTTGCTGTAAGCATGTTTGAGAATCGTTGGTTCATGGTTTCCAGTACAGTGCAGAGTATATAACTACCAAGCTTTAAGTCTAATTTGGAAGGGCAGGTTTAGCCTTACGGTGCATGAGCCAAATAGGAACTGGTTTTTTCTTCTGATATGAGCCTAACTGAGCCATCGGTCCAAGAACATATTCATGTTCATTATTTTGGGACGGACCAGACATGGTAATTGAACTTATTCCTAATAGTGCTATGGCTTGGCCATGTAAATCTTCCATCTGAGAGTGAAGTAAAAAGTAAAACCACAAGTCTTCGAATATTTGGTTAAAGAATGAACTAGTATTTATTTTTTCAAGTTATTTCTCCAGGGTCTAA

mRNA sequence

GGCGGATTCCGATTGCTCTATTAGAACTTCAACAATGGCCTCATGGAGTTCGTCTATTTGCTATGAGGAGGAATTCGAAGAGAATGCGTTTGATAGTCAATCTCGACTTTCAATAAACACTGTTAGAGGCGGTTTCCATCCTGTCGTAGTGCTACGCCAGCTTAATCTGCTGCGCCAAGAACGGGCAGCCTCTTGGAGGCCAAGACTAACTGTTGACAAAAAGGAAAAAAGTAGAGAAGATTTAGAGCCTGAAGTTTATAGGAATAGTAGAGACAACAGTCCGCATGACGTTCAATTTTCTTTTGCAATTGCCATGGTGATTCAGTTACTGTGTCTGTATAAGTTTGGTGCCATCCATCTTCTATTCAGGTGTGTGACCACACATTTTCAAAATTTACCCCAGACACCAGAAGATGTCAATCGCGCAGCAACAATCGACAGCGAGAGGCATGTAGGGGACCATGATCTGCTGGCCTCAGGGGTCTAA

Coding sequence (CDS)

ATGGCCTCATGGAGTTCGTCTATTTGCTATGAGGAGGAATTCGAAGAGAATGCGTTTGATAGTCAATCTCGACTTTCAATAAACACTGTTAGAGGCGGTTTCCATCCTGTCGTAGTGCTACGCCAGCTTAATCTGCTGCGCCAAGAACGGGCAGCCTCTTGGAGGCCAAGACTAACTGTTGACAAAAAGGAAAAAAGTAGAGAAGATTTAGAGCCTGAAGTTTATAGGAATAGTAGAGACAACAGTCCGCATGACGTTCAATTTTCTTTTGCAATTGCCATGGTGATTCAGTTACTGTGTCTGTATAAGTTTGGTGCCATCCATCTTCTATTCAGGTGTGTGACCACACATTTTCAAAATTTACCCCAGACACCAGAAGATGTCAATCGCGCAGCAACAATCGACAGCGAGAGGCATGTAGGGGACCATGATCTGCTGGCCTCAGGGGTCTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G001940.1CmoCh12G001940.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G001940Cucumber (Gy14) v2cgybcmoB160
CmoCh12G001940Cucumber (Gy14) v2cgybcmoB274
CmoCh12G001940Melon (DHL92) v3.6.1cmomedB167
CmoCh12G001940Melon (DHL92) v3.6.1cmomedB175
CmoCh12G001940Silver-seed gourdcarcmoB0078
CmoCh12G001940Silver-seed gourdcarcmoB0868
CmoCh12G001940Cucumber (Chinese Long) v3cmocucB0176
CmoCh12G001940Cucumber (Chinese Long) v3cmocucB0195
CmoCh12G001940Watermelon (97103) v2cmowmbB178
CmoCh12G001940Watermelon (97103) v2cmowmbB151
CmoCh12G001940Wax gourdcmowgoB0218
CmoCh12G001940Wax gourdcmowgoB0205
CmoCh12G001940Cucurbita moschata (Rifu)cmocmoB005
CmoCh12G001940Cucurbita moschata (Rifu)cmocmoB151
CmoCh12G001940Cucumber (Gy14) v1cgycmoB0448
CmoCh12G001940Cucumber (Gy14) v1cgycmoB0854
CmoCh12G001940Cucurbita maxima (Rimu)cmacmoB034
CmoCh12G001940Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G001940Cucurbita maxima (Rimu)cmacmoB767
CmoCh12G001940Wild cucumber (PI 183967)cmocpiB150
CmoCh12G001940Wild cucumber (PI 183967)cmocpiB167
CmoCh12G001940Cucumber (Chinese Long) v2cmocuB149
CmoCh12G001940Cucumber (Chinese Long) v2cmocuB164
CmoCh12G001940Melon (DHL92) v3.5.1cmomeB151
CmoCh12G001940Melon (DHL92) v3.5.1cmomeB159
CmoCh12G001940Watermelon (Charleston Gray)cmowcgB129
CmoCh12G001940Watermelon (Charleston Gray)cmowcgB161
CmoCh12G001940Watermelon (97103) v1cmowmB134
CmoCh12G001940Watermelon (97103) v1cmowmB161
CmoCh12G001940Cucurbita pepo (Zucchini)cmocpeB148
CmoCh12G001940Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G001940Bottle gourd (USVL1VR-Ls)cmolsiB159
CmoCh12G001940Bottle gourd (USVL1VR-Ls)cmolsiB175