CmoCh12G001860 (gene) Cucurbita moschata (Rifu)

NameCmoCh12G001860
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr12 : 1212625 .. 1215590 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTGTCGTTTGATTGAACAAGTTGTCAGATGTTATGATACCAGTAGTTTTAGGAAAGAAAGCTCAATATACAATAGAAAGATAAGAAACATTTGTAATTTTTCCTCAAACACATCTTATGTGCAGAGATTTCCATAGAGTTCATCTTAGCTCTTGATTGCCAATCTTCTATATGTCAATATATTCTTCTACAAGATCGTGTTTGATTTTGACCTTTTTTTATTTTATTTTTTGAGGAAGTTCCACAGTTTAGCGTAAAAATTCGAGGCAAAAATAAGGATTGTGCCCATGCTCTAACCCACCCATGTTTGCATTCATCTGAAATTTGTTTGAACTCGAGTAACATAGTACATAATTTAGATTGAAATTTCCCACTTCTATGCAACAAATATTTAGGCTCTTTGATGTTCTTTTCACTCTGAGCAGGATTAGAATATTTTCCGGGAGGAACTATAAGTATTTGAAGTTAGAAGAGAGTTCTGTTATGCTTATTGAATACCATTTTATAAACACCATAAGAAGGGATCCCCAGTCCCCTCATGATTTTTAGTAATGTTTCACGTCTTTTGAATTATCTAGCAGTTCAATTAACCTTTTCCATGAGTTGTTCTTTCGTCTGTATATTACACTTTTACCTAGAAGAATTCCTTGTTCTATTTAATAATCACCTCTTAGGTTGCATGAGATTCCAACATGTTATTTGCAATTAATTTGTTTTTATGAGTTAATGTATGAGAAGTATTATTGTGGAGACCACATCGTTGATCGATCGAACAGTGAAATACACAAAAGCATGAAACTGATATGCATACTAGTTTCCTAGTTTGTATTTAGATATTAATAACAGGAGAAAAAAACTAATGTATTTTGAAATTTATGTGAGCATCTTATTCAAAATTCTGTGAATGTGATACTGAGGTTCTCCAGCAGGAAATTATTGGTAAGTATTGCTTTTCCTCAAGAGATATGAAAGATGTTTTGATATTGAATCCCACGGTTAATCAATCAGGAAAGACTCCAAAGGTTGAATTTATTATCTTATTGCATTGCTGTTCTCTCATTCTTAGAAATTCCCTTTTTCTAATACCATGTTCCTCCCTTGTTCTTGTAGAGCTAATTTTTCCAACTTCTGTAAGTCTCTTAACAAAAGTTTGTTCTTATGATAATGTCATGTTTTCAATTAGTTTTACATTCAGTACTACTACAGTAGAAGAAGTCAATCTTTATAAAGCTCCTTCCCTAGATATTTTCATGGCTACGTTTTTTCAGGTCGCAGGAGGACTTTTTTTTTTTTTTTTTTTTTCTCCTTATAAAAGCTCCCGTTTCATATACAAATACAGACATCTGCACATGCACACACAATACTAACATCGGGAAAACTGTCGGGTCATCATGGTTTGAAGTCGAGATGTAGGCTAACGAAAAATGTGAGGATTTGGAAATGATGGTTCATTTCTGCTTAGAGTCCTTTAGGGGCATTTCTTTACCCTTTTTTTTTTTTTTTGTTGATCTCATAGATACTGGTTTATGCGCTGGACAGTGAAATAACTGATACCAAGAACGAGTTGATCAGCACATGCTATTTAATCTATTAAATTACTTTTAATGTTGGTGCTCATAATTATTGTTATTAACGACCAGTTTTTTGCAGGCTGGAAAGATGGCGACAGATTGTTGAGACTGGTGTCCGGGCCAGTTATCTGGATGACAGATCTTTAGCAGAAAATATTTGCATTCAGAGGTGGGTTAATGTTCAGTTCTATATAATTTTGGCACCATCCATGATTTCATTATCTCTTTGCTAGTGCTGACCCTGTATGATTTGTATTTTTTTATTGTGATACTTTGTGTTTATTACCTGGTAAGGTAGCTGATGAAGTTGATTGTGTATAAGGAACTTTTTGTCAAGGGCAAGATGAAGAAAAATTCTTGCTTTGTGAGGGTAGAGCTCTTGGATTCCTGAATCTTGTTGTGAAATTTCTTGCGAATCTGATCTTATGTGCGTGAAAACCATCCCCCATTCATCAAACTGAGTTCTAATAAAAATAAAGATCTTGTCTGATGATGTATCTTCAAACTTTTATGTATTTCTTTGCCTTTTAGCATTGGATACAGAGAATTCATGCTGCAACACGTTGCGAAGGAGGTTTTGTGTTACTTATCTTACCTTGTTACTAGGTGCCAGGATTACAGATGTTTCTCACAGAGTTGACCATTTTATTGATCAAGAGTCGAGCACGAGTCTAGTGACCGAAGAATTTAGGGAGTGAATATTCTTATTACATATTGAAGATGTTTGTTATTTATCAAGTCAAAGATCTTTAATCTCTCTGGATGATAAATGTTCATGTGATGTGATCTCTTTCCCCAACTTCACTCTAATACAGTATTTCATTATTGATGTGCCAATGAAAATGACTCCCATTTCAACTCATGCAGTCTCAAGCTGATGCTCTCTGGGAGTGGGGGGACTCCAAGGTGCCATTGGTGCTGGCTCGAAACATGTGTAGATTCCCCAGCAAGCGTTCATCACGGATTGGAGAACGAAGGTACGTTCTTGTTCGTGTAACACGTTTTTAAAACAAACGATAAAATTCTAAGATATTATTTATAATTTAGCCTCTTTCTTTTACATCACAATCGAATCTTCGACGTAAAAAAGTTACGTCGAAGAGTATAGGATGTTCTTATTATATATTTCTTATATGTAATTCGGGTATCGAGGCTCATCCTCACCGATTTTTTAGGAGACCCGAAAGTTGGCTCTTCTGAATTTCAAGGGGCCAGAGATTTGAATTCTCTCCATTGAAGCATTTGGTTCTAACAGAGGACATAAGAAGTGTTCCAAGATTCCAGATGTTCTTGATGTATTTGTTTTCCAATCTTCTCCGCTTTTCTCCTTTCCACATTCTTACGCAAAATTATTCAAGAATATGAACCTATTGGAAAGAAGAGTGGCTTGA

mRNA sequence

ATGCTTTGTCGTTTGATTGAACAAGTTGTCAGATGTTATGATACCAGTAGTTTTAGGAAAGAAAGCTCAATATACAATAGAAAGATAAGAAACATTTTTTTTTGCAGGCTGGAAAGATGGCGACAGATTGTTGAGACTGGTGTCCGGGCCAGTTATCTGGATGACAGATCTTTAGCAGAAAATATTTGCATTCAGAGTCTCAAGCTGATGCTCTCTGGGAGTGGGGGGACTCCAAGGTGCCATTGGTGCTGGCTCGAAACATGTGTAGATTCCCCAGCAAGCGTTCATCACGGATTGGAGAACGAAGGAGACCCGAAATGTTCCAAGATTCCAGATGTTCTTGATGTATTTGTTTTCCAATCTTCTCCGCTTTTCTCCTTTCCACATTCTTACGCAAAATTATTCAAGAATATGAACCTATTGGAAAGAAGAGTGGCTTGA

Coding sequence (CDS)

ATGCTTTGTCGTTTGATTGAACAAGTTGTCAGATGTTATGATACCAGTAGTTTTAGGAAAGAAAGCTCAATATACAATAGAAAGATAAGAAACATTTTTTTTTGCAGGCTGGAAAGATGGCGACAGATTGTTGAGACTGGTGTCCGGGCCAGTTATCTGGATGACAGATCTTTAGCAGAAAATATTTGCATTCAGAGTCTCAAGCTGATGCTCTCTGGGAGTGGGGGGACTCCAAGGTGCCATTGGTGCTGGCTCGAAACATGTGTAGATTCCCCAGCAAGCGTTCATCACGGATTGGAGAACGAAGGAGACCCGAAATGTTCCAAGATTCCAGATGTTCTTGATGTATTTGTTTTCCAATCTTCTCCGCTTTTCTCCTTTCCACATTCTTACGCAAAATTATTCAAGAATATGAACCTATTGGAAAGAAGAGTGGCTTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G001860.1CmoCh12G001860.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G001860Carg22482Silver-seed gourdcarcmoB1111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G001860Cucumber (Gy14) v1cgycmoB0854
CmoCh12G001860Cucurbita maxima (Rimu)cmacmoB034
CmoCh12G001860Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G001860Cucurbita maxima (Rimu)cmacmoB767
CmoCh12G001860Wild cucumber (PI 183967)cmocpiB150
CmoCh12G001860Wild cucumber (PI 183967)cmocpiB167
CmoCh12G001860Cucumber (Chinese Long) v2cmocuB149
CmoCh12G001860Cucumber (Chinese Long) v2cmocuB164
CmoCh12G001860Melon (DHL92) v3.5.1cmomeB151
CmoCh12G001860Melon (DHL92) v3.5.1cmomeB159
CmoCh12G001860Watermelon (Charleston Gray)cmowcgB129
CmoCh12G001860Watermelon (Charleston Gray)cmowcgB161
CmoCh12G001860Watermelon (97103) v1cmowmB134
CmoCh12G001860Watermelon (97103) v1cmowmB161
CmoCh12G001860Cucurbita pepo (Zucchini)cmocpeB148
CmoCh12G001860Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G001860Bottle gourd (USVL1VR-Ls)cmolsiB159
CmoCh12G001860Bottle gourd (USVL1VR-Ls)cmolsiB175
CmoCh12G001860Cucumber (Gy14) v2cgybcmoB160
CmoCh12G001860Cucumber (Gy14) v2cgybcmoB274
CmoCh12G001860Melon (DHL92) v3.6.1cmomedB167
CmoCh12G001860Melon (DHL92) v3.6.1cmomedB175
CmoCh12G001860Silver-seed gourdcarcmoB0078
CmoCh12G001860Silver-seed gourdcarcmoB0544
CmoCh12G001860Silver-seed gourdcarcmoB0868
CmoCh12G001860Cucumber (Chinese Long) v3cmocucB0176
CmoCh12G001860Cucumber (Chinese Long) v3cmocucB0195
CmoCh12G001860Cucumber (Chinese Long) v3cmocucB0209
CmoCh12G001860Watermelon (97103) v2cmowmbB178
CmoCh12G001860Watermelon (97103) v2cmowmbB151
CmoCh12G001860Wax gourdcmowgoB0218
CmoCh12G001860Wax gourdcmowgoB0205
CmoCh12G001860Cucurbita moschata (Rifu)cmocmoB005
CmoCh12G001860Cucurbita moschata (Rifu)cmocmoB151
CmoCh12G001860Cucumber (Gy14) v1cgycmoB0448