CmoCh12G000860 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G000860
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUbiquinone biosynthesis protein COQ4 like, mitochondrial
LocationCmo_Chr12 : 463930 .. 467011 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACTGCTCTCTTAATTCCTTCCCGCTTCTCCCTTGGTGGCATTTGTTCGTTCTGGACCTTTCTCCCGCTCTTCGATTCATAGAATCATTTCTATTGCCTTCTTTAACTCTCTCAATCTGGATCAGGAACGTTCGCTTTCACTTTCTCTTGCTCCCTGATTGAATCTCATTCGAAGAATTGCTCGGAGAAAAGGTAATCACGTTTCGTTTCAATTCATTTCGTTTCGTGTTGTAAATTTTAGTCGCAGTCTTTCCTCTCGCTTCTTAGCTCAATGATAACGTTTTTTCGGTCGATTATATTATCAATTGTTATTACTGAATTAGCGTCTCTTTCTGAAACTGCTTGTATGTGTTTGCATAGCATGACAATTCAATGCGTTTGTAAAATTTGGTGTTGCGTGCTCAACCGATTCAATCAGCTGATTCATGGCCTATATTTCAATTTGATTCAGCTTTTCTATTTGATTTTTGTTTGGTCGAACGTGTCGCGGCTTTCGTTTGGCAATTCTCGGTGTTGGATTTACTTTGGACTCTGATGTCATTAGTTTTTCTTAATTCAACTTTGGTTTCCTTGTTGATTTACGGGGAAATTTATGGAGTTTTGAATATATTTCTCGACATCGGTTTTCCAGAGAATCACGTTCGTACTAATGAATGATTTGCTCTTACTACTTACTCGAGAAATCCTGGACAATTTAGTGAGAACAGATCGATTGCGAAAGTGGTGGAGTTCGCTCTATAGGATATTTTTTTTCTTTATTACCATCATATCCATAGTTTTATGTTATGTTGCAAGGATAAGCTATGAGATATTATGATGTTGCTGATATTCAGGCAGAAGCTAACTATTTCTGCAGATGGTTTTGTTGTTTATCTACTGTTAGTCATGGAGTCTATTGAAATCAGACGGCCTATAGTTTGTCGCAGTTATCTTTTAGCCTCTCAAGATTTTTTCATTATTCGTAGAGAAGAGAGGTTGGGATCTGGTTAGACATTTAAGCTAAATTAATTTTGATCCTAAAGTAGATGATGACTTTTCTGCTAGTGAATTTGCTTTAAACATTGGTGTCACACTGTGCTGTAGCCTTTTGCTGTACTTTACGTTCTTTTAAGGTAGGGCATTCTTTACATCTCAACACTTCAATGACCAAACAAATAATTTCCAAGTTTTGTTGAGCCAGCATTCCCTTGATATTTCTCTAAAAATCCTACTCTCAGCATATGACACATATTCCCCTTGTATAGCAAGTGTTAGGAGAAATGCTTCCTAAAGTGCCAAGTTCTGTTAAGTATTACTTCTCTTTTAATTTAATATGTACCTTCTCTTGGCTGGAGTTGTGATCTATTCTATCTAGATAGCCTCTATTTAGGTCTAAAATTACTTAAGATTTTTGTATACTTGATATTTGGTTTTAGGTATTTTTATATTTTCATTGTTGAAGTATGGTTTAGAACTTCTGATGAAGAGAAATAGCCAATTTTTGAAGGTATTGTTGGTTAGTTTGAACTTGTACGTATCTAGTAAATTACTTTTTATGGTTTCGTTATGGTCTTCAATGATCGAGCATTTTTATCTTTTTTCCCCCCTCATTACAGCAAACAGAAAAAAAAAAGGTACTGTTGGATATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTTGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCATCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGATGAAGGCAGAGTAAGCTCTTAATTTTGTAATACTATGTTTAATATTTCCATGTTTCATATTCCTTCGTGGTTTGCAAGTCTTTTCTCATGGAATAAAAATGAAAAACCTAATATGCTTATATTTAATAAGATGAAGAATACAAAAGGAATAGAATGGTTATCTTGTATAACTGATGGAATTGCTTTTATTTGATTGCTGCAGAAACAACTTGGTTTAGTTTTTCTTCTTTAAATTCATTTTTGAGAATGAATTGGGACTTGTAAGTTATTGACTTGATGTTCTTGTGTATTCCTATTGGATAATGTAATTGGCTGAGAAGCTCATGCATTACTTTCTTCCCCTCCCCATCAAGGCTTCCTTTCCTCTCTTGGAAACAAAAACATGAAACACTAGTTTAACCGAAGTGTTGGTATTGGAAATGCTCTAGAACACATGATATGGAGCAATGCAACTAAGTTGGAACCTCAATTTACCATTTCAAATGAATATTTTAGTTTCTTTTATTTCATTCTCTTGCCTGGTTAAATTGTTTCATTTTTTCCATTTGGCTAATATGGAAGGCATCAACATTTCAAATTTATTGAGAGATCGTCATTTTCGCTCAGTTATTTCCTTTCCGTCATGTTACTTGTCCCAAATGAACTTTATCATGATGTTCCAGTTTCAGCTTTCTAAATTTATTTTTCATCTGTTGTATGACTAGAATCTCTTGAAATTCCTTGGTACCATGTATGGGCTTTCGTGAGTCGTCCATTTGAGTATGAAACAAAACAAATTTCTTCTACAGGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCTCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGGTTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGGTTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCTGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCATATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGGTTAA

mRNA sequence

GCACTGCTCTCTTAATTCCTTCCCGCTTCTCCCTTGGTGGCATTTGTTCGTTCTGGACCTTTCTCCCGCTCTTCGATTCATAGAATCATTTCTATTGCCTTCTTTAACTCTCTCAATCTGGATCAGGAACGTTCGCTTTCACTTTCTCTTGCTCCCTGATTGAATCTCATTCGAAGAATTGCTCGGAGAAAAGCAAACAGAAAAAAAAAAGGTACTGTTGGATATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTTGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCATCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGATGAAGGCAGAGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCTCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGGTTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGGTTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCTGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCATATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGGTTAA

Coding sequence (CDS)

ATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTTGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCATCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGATGAAGGCAGAGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCTCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGGTTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGGTTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCTGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCATATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGGTTAA
Homology
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BLAST of CmoCh12G000860 vs. Swiss-Prot
Match: COQ4_ARATH (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thaliana GN=At2g03690 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 6.9e-108
Identity = 177/220 (80.45%), Postives = 201/220 (91.36%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           R+ L++WQQAAVA+GSA+GAL+DPRRADLIAALGETTGKP+FE VLERMK+S+EGRA+LL
Sbjct: 7   RVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILL 66

Query: 65  ERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 124
           ERPRV+S +VGHAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVA RAREV
Sbjct: 67  ERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREV 126

Query: 125 HDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFPWA 184
           HD WHTLFGLPTNLIGES+LKVIEFEQM+LPMCMLSV+GGT RFN+KQR++F  HY PWA
Sbjct: 127 HDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWA 186

Query: 185 IRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           +RAG +C DLMC+YYERHF EDL+ VR KWGIIPAP  PK
Sbjct: 187 VRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHPK 226

[Close]
BLAST of CmoCh12G000860 vs. Swiss-Prot
Match: COQ4_AEDAE (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti GN=AAEL014646 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.9e-51
Identity = 94/214 (43.93%), Postives = 137/214 (64.02%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           +I+L + Q+  ++ GS++ AL+DPRR D+IA LGETTG P+ E + ++M+ SDEGR +L 
Sbjct: 55  QIKLTELQRVILSAGSSIAALVDPRRHDMIACLGETTGVPALENIRDQMRNSDEGRQILE 114

Query: 65  ERPRVLSSEVGH--AWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           ++PR+ +  V       LP NTFG  Y +FM     +PD R  V+FMD  EL YV  R R
Sbjct: 115 DKPRINTRTVNMDALKKLPENTFGYQYVSFMEKYEITPDSRMEVKFMDDPELAYVMTRYR 174

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+FG+PTN++GE A+K +E   + LPMC    + G  R   KQR  +   Y P
Sbjct: 175 ETHDLVHTVFGMPTNMLGEVAIKWVEAINIGLPMCYGGAIFGAFRLRPKQRQNYLQRYLP 234

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+RAG R   LMC+Y+E+ + +D++++R +  I
Sbjct: 235 WALRAGQRARPLMCVYWEKRWEQDIEELRKELNI 268

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BLAST of CmoCh12G000860 vs. Swiss-Prot
Match: COQ4_DROAN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananassae GN=GF24309 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.1e-48
Identity = 88/214 (41.12%), Postives = 136/214 (63.55%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+++ +Q+  +  GS++ ALLDPRR D+IA LGETTG+ + E +L+ M+ S+EG+ ++ 
Sbjct: 47  RIEISPFQRVILGAGSSIAALLDPRRHDMIACLGETTGEGALENILDTMQASEEGQRIMA 106

Query: 65  ERPRVLSSEVGHAW--DLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           E+PR+ +S +       LP+++FG+AY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 107 EKPRIHTSTIDFKLLESLPADSFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYR 166

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+ G+PTN++GE A+K +E     LPMC    + G  R   KQR  +  HY P
Sbjct: 167 ECHDLIHTVLGMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 226

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+  G R   LM +Y+E+ + + L D+RA+ GI
Sbjct: 227 WALENGKRSKPLMPVYWEKRWEQKLQDLRAELGI 260

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BLAST of CmoCh12G000860 vs. Swiss-Prot
Match: COQ4_DROER (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila erecta GN=GG15811 PE=3 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 5.8e-46
Identity = 84/214 (39.25%), Postives = 136/214 (63.55%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+++ +Q+  +A GS++ ALLDPRR D+IA LGETTG+ +   +L+ M+ S+EG+ ++ 
Sbjct: 49  RIEISPFQRVFLAAGSSIAALLDPRRHDMIACLGETTGEDALWTILDSMQASEEGQRIMA 108

Query: 65  ERPRVLSSEVGHAW--DLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           ++PR+ +S +   +   LP +TFG+AY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 109 DKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEEPKLAYLMTRYR 168

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+  +PTN++GE ++K +E     LPMC    + G  R   KQR  +  HY P
Sbjct: 169 ECHDLIHTVLDMPTNMLGEVSVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 228

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+  G R   LM +Y+E+ + +++ D+R++ GI
Sbjct: 229 WALENGKRTKPLMPVYWEKRWEQNIHDLRSELGI 262

[Close]
BLAST of CmoCh12G000860 vs. Swiss-Prot
Match: COQ4_DROYA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila yakuba GN=GE22150 PE=3 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 2.2e-45
Identity = 83/214 (38.79%), Postives = 135/214 (63.08%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+++ +Q+  +  GS++ ALLDPRR D+IA LGETTG+ +   +L+ M+ S+EG+ ++ 
Sbjct: 49  RIEISPFQRVFLGAGSSIAALLDPRRHDMIACLGETTGEDALLTILDTMQASEEGQRIMA 108

Query: 65  ERPRVLSSEVGHAW--DLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 124
           ++PR+ +S +   +   LP +TFG+AY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 109 DKPRIHTSTIDFKYLETLPPDTFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYR 168

Query: 125 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 184
           E HD  HT+  +PTN++GE A+K +E     LPMC    + G  R   KQR  +  HY P
Sbjct: 169 ECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 228

Query: 185 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGI 217
           WA+  G R   LM +Y+E+ + +++ ++R++ GI
Sbjct: 229 WALENGKRSKPLMPVYWEKRWEQNIHELRSELGI 262

[Close]
BLAST of CmoCh12G000860 vs. TrEMBL
Match: A0A0A0KFN6_CUCSA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis sativus GN=Csa_6G366570 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 7.2e-120
Identity = 206/220 (93.64%), Postives = 215/220 (97.73%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           GVRIQLN+WQQAAVALGSAVGALLDPRRADLIAALGETTGKP+FERVLERMK+S EGRAV
Sbjct: 4   GVRIQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAV 63

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           L+ERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDT+ELEYVAMRAR
Sbjct: 64  LMERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAMRAR 123

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFN+KQR LFF HYFP
Sbjct: 124 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQHYFP 183

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPS 223
           W+IRAGM+C DLMCIYYERHFHEDL+DVRAKWGIIPAPPS
Sbjct: 184 WSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPS 223

[Close]
BLAST of CmoCh12G000860 vs. TrEMBL
Match: A0A059D7W8_EUCGR (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Eucalyptus grandis GN=EUGRSUZ_B03145 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.5e-112
Identity = 190/222 (85.59%), Postives = 209/222 (94.14%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           G R+ LN+WQQAAVA+GSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRAV
Sbjct: 4   GARVHLNRWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSPEGRAV 63

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           LL+RPRV+S+EV HAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVAMRAR
Sbjct: 64  LLDRPRVISTEVSHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVAMRAR 123

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQM+LPMC LSVLGGTARFN+KQR LFF HYFP
Sbjct: 124 EVHDFWHTLFGLPTNLIGESALKVIEFEQMYLPMCFLSVLGGTARFNEKQRALFFQHYFP 183

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           WA++AGMRC DLMC+YYERHFHEDL+DVR++WGI+ AP +PK
Sbjct: 184 WALQAGMRCTDLMCLYYERHFHEDLEDVRSRWGIVLAPAAPK 225

[Close]
BLAST of CmoCh12G000860 vs. TrEMBL
Match: A0A067L9Z6_JATCU (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Jatropha curcas GN=JCGZ_15727 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.7e-111
Identity = 187/219 (85.39%), Postives = 206/219 (94.06%), Query Frame = 1 

Query: 2   VGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRA 61
           +G R+QLN+WQQAAVA GSA+GALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRA
Sbjct: 1   MGARVQLNRWQQAAVAFGSAIGALLDPRRADLIAALGETTGKPAFERVLERMKRSPEGRA 60

Query: 62  VLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRA 121
           VLL RPRV+S+EV HAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFMDTDEL YVAMRA
Sbjct: 61  VLLGRPRVISAEVAHAWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRA 120

Query: 122 REVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYF 181
           REVHDFWHTLFGLPTNLIGESALKVIEFEQM+LPMC++SV+GGTARF++KQR LFF HY 
Sbjct: 121 REVHDFWHTLFGLPTNLIGESALKVIEFEQMYLPMCLMSVVGGTARFSEKQRRLFFNHYL 180

Query: 182 PWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAP 221
           PWA+RAGM+C DLMC+YYE+HFHED+DDVR KWGIIPAP
Sbjct: 181 PWAVRAGMQCTDLMCVYYEKHFHEDVDDVRRKWGIIPAP 219

[Close]
BLAST of CmoCh12G000860 vs. TrEMBL
Match: F6GVM5_VITVI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Vitis vinifera GN=VIT_01s0137g00660 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.4e-110
Identity = 184/222 (82.88%), Postives = 208/222 (93.69%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           G R++LN WQQAAVA+GSA+GAL+DPRRADLIAALGETTGKP+FERVLERMK+S EG+A+
Sbjct: 5   GARVRLNGWQQAAVAMGSAIGALMDPRRADLIAALGETTGKPAFERVLERMKKSPEGQAI 64

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           LL+RPRV+S+ VGHAWD+P+NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVAMRAR
Sbjct: 65  LLDRPRVVSARVGHAWDMPANTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVAMRAR 124

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLF LPTNLIGESALKVIEFEQM LPMC+LSV+GGTARF++KQR LFF HYFP
Sbjct: 125 EVHDFWHTLFSLPTNLIGESALKVIEFEQMFLPMCLLSVIGGTARFSEKQRALFFQHYFP 184

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           WA RAGM+C DLMCIYYE+HFHEDLDDVR KWGI+PAPP P+
Sbjct: 185 WATRAGMQCTDLMCIYYEQHFHEDLDDVRRKWGIVPAPPPPR 226

[Close]
BLAST of CmoCh12G000860 vs. TrEMBL
Match: A0A0D2SH24_GOSRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Gossypium raimondii GN=B456_005G145900 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.8e-110
Identity = 186/220 (84.55%), Postives = 206/220 (93.64%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           RI+L+ WQQAAVA+GSAVGALLDPRRADLIAALGETTGKP+FERVLERM+RS EGRAVL+
Sbjct: 6   RIKLSPWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLERMRRSPEGRAVLI 65

Query: 65  ERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 124
           ERPRV+S++VGHAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFMDTDEL YVAMRAREV
Sbjct: 66  ERPRVISAKVGHAWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREV 125

Query: 125 HDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFPWA 184
           HD WHTLFGLPTNLIGESALKVIEFEQMHLPMC+LSV+GGT+RFN KQR LFF HYFPWA
Sbjct: 126 HDLWHTLFGLPTNLIGESALKVIEFEQMHLPMCLLSVVGGTSRFNAKQRKLFFQHYFPWA 185

Query: 185 IRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           ++AG +C DLMC+YYE+HFHEDL+DVR KWG+IPAP  PK
Sbjct: 186 VKAGFQCTDLMCVYYEQHFHEDLEDVRRKWGVIPAPTVPK 225

[Close]
BLAST of CmoCh12G000860 vs. TAIR10
Match: AT2G03690.1 (AT2G03690.1 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein)

HSP 1 Score: 391.3 bits (1004), Expect = 3.9e-109
Identity = 177/220 (80.45%), Postives = 201/220 (91.36%), Query Frame = 1 

Query: 5   RIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAVLL 64
           R+ L++WQQAAVA+GSA+GAL+DPRRADLIAALGETTGKP+FE VLERMK+S+EGRA+LL
Sbjct: 7   RVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILL 66

Query: 65  ERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 124
           ERPRV+S +VGHAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVA RAREV
Sbjct: 67  ERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREV 126

Query: 125 HDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFPWA 184
           HD WHTLFGLPTNLIGES+LKVIEFEQM+LPMCMLSV+GGT RFN+KQR++F  HY PWA
Sbjct: 127 HDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWA 186

Query: 185 IRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           +RAG +C DLMC+YYERHF EDL+ VR KWGIIPAP  PK
Sbjct: 187 VRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHPK 226

[Close]
BLAST of CmoCh12G000860 vs. NCBI nr
Match: gi|659089309|ref|XP_008445438.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucumis melo])

HSP 1 Score: 440.3 bits (1131), Expect = 2.1e-120
Identity = 208/220 (94.55%), Postives = 215/220 (97.73%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRAV
Sbjct: 4   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGRAV 63

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           L+ERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDT+ELEYVAMRAR
Sbjct: 64  LIERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAMRAR 123

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFN+KQR LFF HYFP
Sbjct: 124 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQHYFP 183

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPS 223
           W+IRAGM+C DLMCIYYERHFHEDL+DVRAKWGIIPAPPS
Sbjct: 184 WSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPS 223

[Close]
BLAST of CmoCh12G000860 vs. NCBI nr
Match: gi|449452835|ref|XP_004144164.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 1.0e-119
Identity = 206/220 (93.64%), Postives = 215/220 (97.73%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           GVRIQLN+WQQAAVALGSAVGALLDPRRADLIAALGETTGKP+FERVLERMK+S EGRAV
Sbjct: 4   GVRIQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAV 63

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           L+ERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDT+ELEYVAMRAR
Sbjct: 64  LMERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAMRAR 123

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFN+KQR LFF HYFP
Sbjct: 124 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQHYFP 183

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPS 223
           W+IRAGM+C DLMCIYYERHFHEDL+DVRAKWGIIPAPPS
Sbjct: 184 WSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPS 223

[Close]
BLAST of CmoCh12G000860 vs. NCBI nr
Match: gi|702275930|ref|XP_010044391.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X2 [Eucalyptus grandis])

HSP 1 Score: 412.9 bits (1060), Expect = 3.5e-112
Identity = 190/222 (85.59%), Postives = 209/222 (94.14%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           G R+ LN+WQQAAVA+GSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRAV
Sbjct: 4   GARVHLNRWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSPEGRAV 63

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           LL+RPRV+S+EV HAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVAMRAR
Sbjct: 64  LLDRPRVISTEVSHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVAMRAR 123

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQM+LPMC LSVLGGTARFN+KQR LFF HYFP
Sbjct: 124 EVHDFWHTLFGLPTNLIGESALKVIEFEQMYLPMCFLSVLGGTARFNEKQRALFFQHYFP 183

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           WA++AGMRC DLMC+YYERHFHEDL+DVR++WGI+ AP +PK
Sbjct: 184 WALQAGMRCTDLMCLYYERHFHEDLEDVRSRWGIVLAPAAPK 225

[Close]
BLAST of CmoCh12G000860 vs. NCBI nr
Match: gi|702275926|ref|XP_010044390.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1 [Eucalyptus grandis])

HSP 1 Score: 412.9 bits (1060), Expect = 3.5e-112
Identity = 190/222 (85.59%), Postives = 209/222 (94.14%), Query Frame = 1 

Query: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRAV 62
           G R+ LN+WQQAAVA+GSAVGALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRAV
Sbjct: 14  GARVHLNRWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSPEGRAV 73

Query: 63  LLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122
           LL+RPRV+S+EV HAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFM+TDEL YVAMRAR
Sbjct: 74  LLDRPRVISTEVSHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVAMRAR 133

Query: 123 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYFP 182
           EVHDFWHTLFGLPTNLIGESALKVIEFEQM+LPMC LSVLGGTARFN+KQR LFF HYFP
Sbjct: 134 EVHDFWHTLFGLPTNLIGESALKVIEFEQMYLPMCFLSVLGGTARFNEKQRALFFQHYFP 193

Query: 183 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPK 225
           WA++AGMRC DLMC+YYERHFHEDL+DVR++WGI+ AP +PK
Sbjct: 194 WALQAGMRCTDLMCLYYERHFHEDLEDVRSRWGIVLAPAAPK 235

[Close]
BLAST of CmoCh12G000860 vs. NCBI nr
Match: gi|802568441|ref|XP_012067802.1| (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Jatropha curcas])

HSP 1 Score: 409.5 bits (1051), Expect = 3.9e-111
Identity = 187/219 (85.39%), Postives = 206/219 (94.06%), Query Frame = 1 

Query: 2   VGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPSFERVLERMKRSDEGRA 61
           +G R+QLN+WQQAAVA GSA+GALLDPRRADLIAALGETTGKP+FERVLERMKRS EGRA
Sbjct: 1   MGARVQLNRWQQAAVAFGSAIGALLDPRRADLIAALGETTGKPAFERVLERMKRSPEGRA 60

Query: 62  VLLERPRVLSSEVGHAWDLPSNTFGSAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRA 121
           VLL RPRV+S+EV HAWDLP NTFG+AYA FMGSRNFSPDDRPPVRFMDTDEL YVAMRA
Sbjct: 61  VLLGRPRVISAEVAHAWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRA 120

Query: 122 REVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFLHYF 181
           REVHDFWHTLFGLPTNLIGESALKVIEFEQM+LPMC++SV+GGTARF++KQR LFF HY 
Sbjct: 121 REVHDFWHTLFGLPTNLIGESALKVIEFEQMYLPMCLMSVVGGTARFSEKQRRLFFNHYL 180

Query: 182 PWAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAP 221
           PWA+RAGM+C DLMC+YYE+HFHED+DDVR KWGIIPAP
Sbjct: 181 PWAVRAGMQCTDLMCVYYEKHFHEDVDDVRRKWGIIPAP 219

The following BLAST results are available for this feature:
BLAST of CmoCh12G000860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COQ4_ARATH6.9e-10880.45Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thali... [more]
COQ4_AEDAE5.9e-5143.93Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti GN=... [more]
COQ4_DROAN6.1e-4841.12Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananas... [more]
COQ4_DROER5.8e-4639.25Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila erecta... [more]
COQ4_DROYA2.2e-4538.79Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila yakuba... [more]
BLAST of CmoCh12G000860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFN6_CUCSA7.2e-12093.64Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis sativus G... [more]
A0A059D7W8_EUCGR2.5e-11285.59Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Eucalyptus grandi... [more]
A0A067L9Z6_JATCU2.7e-11185.39Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Jatropha curcas G... [more]
F6GVM5_VITVI1.4e-11082.88Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Vitis vinifera GN... [more]
A0A0D2SH24_GOSRA1.8e-11084.55Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Gossypium raimond... [more]
BLAST of CmoCh12G000860 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03690.13.9e-10980.45 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesi... [more]
BLAST of CmoCh12G000860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089309|ref|XP_008445438.1|2.1e-12094.55PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucumis ... [more]
gi|449452835|ref|XP_004144164.1|1.0e-11993.64PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucumis ... [more]
gi|702275930|ref|XP_010044391.1|3.5e-11285.59PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X... [more]
gi|702275926|ref|XP_010044390.1|3.5e-11285.59PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X... [more]
gi|802568441|ref|XP_012067802.1|3.9e-11185.39PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Jatropha... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007715Coq4
IPR027540Coq4_euk
Vocabulary: Biological Process
TermDefinition
GO:0006744ubiquinone biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0031314 extrinsic component of mitochondrial inner membrane
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G000860.1CmoCh12G000860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007715Ubiquinone biosynthesis protein Coq4PFAMPF05019Coq4coord: 5..220
score: 4.5
IPR027540Ubiquinone biosynthesis protein Coq4, eukaryotesHAMAPMF_03111Coq4coord: 1..219
score: 31
NoneNo IPR availablePANTHERPTHR12922UBIQUINONE BIOSYNTHESIS PROTEINcoord: 5..224
score: 1.6E