CmoCh12G000550 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAGAAATCGACGCCTTCTTTTTTCCCCTCCACTCGTATTTCTTCACCAAAAGCAGAAGGAAATCCGAGGTCCAAGGTTCACGGAATTGCAGCAAACCGTGGAAAGTGAAATCCAGGTAGAGTTTGATTGTTGTTGTTCTAAGAGAAGCGCGCTAATGGCTTCCACAAGTTTTGTTTGTGGTAATTCCTCTGAATAATGTTCGTAAAGAGCATTGTCAACCAAAATCGCTCGTCTCTGTCACTTGGAATCCAAATGCGATCGATGTGGTTGTGTGGTAACGGCAACGCAATCGATGCGAATCAATAGTCCAGCTTAAGCCACGTTTACTCGACCTCAAATTTAATATCTCCAAATATTATTAATTGTCCACCAATGTAATTTAATGAATGATCGCGTTTATAATCAACATATGAATCGTATGTATTTATAATCAAATAATACTCTCCTTCATCTCGATAAAGCCTTTTGAGAAGCCCAAACAAAACCATGAGAGCTTATGCTCAAAATGGACAATATCATACCATTATGGAGAGTCGTGTTCATCTAACATGGTATCAGAGTCATCCTAAACTTAGTCGTGCCAATAGATCGGTGAATCCTCAAATGTCAAACAAAGGACTTTAAAAGAAAAGGAGTCGAGGCTCCTCGGTGCCAATATAGATTGGTGAATCTTCAAATTGCCAATATAGATTGGTGAATCTTCAAATGTTAAACAAAGGACTCCAAAAGAAAAGGAGGAGTTGAGGCTTCTCAAGGCATAGTAAAAAAATGACAAAGACTCCAAAAGAAAAAAAATGAGTCGAGCCTCGATTAAGAGGAGACGTACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCCTACATTGGCGCTAATTTAGGGAATGATCATGAGTTTATAATCAAATAATACTCTCTCCATCGGTATTAGACATTTTGGGGCAAACCGATGAGAGTTTATGCTTAAAGTGGACAATATGATACAATTGTGGAGAGTCGTGTTATCCAGTTATAACTCTAGAAAGTTTAATTTTGAACTACATGTAAAATATAAAATATTATTAAAATAGTTATGATTTCACCGTTTAAAATGGAATGAAATTAATTAAAATAAGAGGAAAACTGTTGGCTAATAAAGTAGGTTAAATAAATTAAGGATGGTTGTTTGGATAAAATTAGTATATTTTAAGGAAGAAAGTCCAATTTGGGAGGTATAAATCGTTGAAGCCATAAATAAAGTGATTATTTGTCTAATTAAGTAATTATTGCCCAACTTGCCGTCCCTCCTCTTATTTTCTTCATTTCCTTTTTGACTTTTTCCCCCATTATGAATGACATTTGTTGATATTGAGTTAGGGGCAATTTTGTAATGTTACCCTCCAATTATTGAATGAAATAAAACTATATATATATATATATAATATATGATCCTCTATTTCCATTTGAGGGAAATTCTTGAAATTGGTATTTTAATTATTTTATAACCTAATGTTTTTCTTCTTGAATAATTATTTAATTGAATCCCTAACCAAATTTTTATTCATTTAAGATTTTCTAGAATTTAAATGGGTAAATTACACGAGAAAATAAATATGCCATATAAATTCACTTATTTTTAAAAACGTTTTATTAATTTTCAACGAATTTTCTGAGCAATATTCCAACTTATCGTATTTAAAAAAAATCATTGATTTAGGAATAATAGCTAAATAAGTGGAAATAGAAAATTTATTAAAAAAATTAATAAAAATAATTAAAATATGGTCACGATGAGGAGTATTTTCATAAAATTATATATTTATTTGGAAATTGTATTGCAAAATATTATTTTACTAATTTAATTTTTGGTTAGTTGTAAAAATTGTTTGAGCTTTCCGAAATTACTAAATTAATCTCATGATTAAAGAAAGTTTAATTGGAGATTAAGGTTAAAAATAAGATAATAAAATTAGAAACAGGTAATTAATTAATTAAGTTGTTTTATTTCGCTAATTCCTTAATTCGGGGGAACACAAAAGACGACAATTATCGTCTCCTTCGTGTCTTGGCGAGCAATTGCGCGGAAAATCTCATTCTGACGTGGTCCGGTTCTGTCAGTTTTATCCTTTTCTTTTTTTTTTTTTCATTCCTATTTTTGGTTCTCTATAAATCTTCTTCAATCTCAGCCCCACCCTAGAGACCAACCACATCTTCTTCATTTTTTTCAAATCTCTCAACAACCCTCTTTGCTGCTGCTGCTGCTGCTTCTGCCGCCTCTCTGGTAATCTTCTCTTTCTGATCTTGAATCTGCTGTATTGATTATGTTCTTTTTTTTTTCCGCTTTCGATTCCGGCTTGTGTTTGCTGCAGATCTGGTGGTATTTTCTTTTATTTTCTGTTTTAGATCAGTTTACTTCACTGGATCTTTGTATCCATGGAGTTTGGATTTGTGTGATTCTTGTTTGTAATTTTTTGGAGGCGGGGGGTGAAGTGGCTTCTTTTTGTACTTCGTAGCTGTGCAGCTTGTTAAATCCTATGCAATGCTGTGTTGTTGTGTTTATGCGGCTGTTTATGCTTTGCCATTGTTTTGTTTGCTCTAGATTCTGCTGTTCATCGTTTTGCTAGGGTCTTGAATTGTCGGCTCAATTTCTGAGTTCAGTGTTCATGTATCTATATCGTTTTTTATGGTTGTGATTTTGATGCGATGGAAGTTTTGTTGGTCTTTGAGAACGAACAGCTTAACTTTTCCTGGTTCATCTTGTTTTTTCGCGATTCTATAATGTTGAGGGATTCTTTTACTTTTATTCAATTTTTGAGTTCAGTGTCTGTGTAGAAGATTAATTGACTTCAGATCCGGTTGAAGAGCTGTTTTCTTGTACCCTCTTGAAGGTGACTGTTGGACCCAACTTGTTGGCTGCTTTGCTTGTATTTCCCTCCATATCTCTGCTAAGCTCGGCTTCTATCTGCTTCATTATGAAGAAGCTGCTGAGATATTTACTGTCACTTTGTTCGGCATCGCCATTCTCACCCTTCGAATACTGAATAAGAACACGTGTCAAACCCAATACTCGGTGTTTGACGAGTCTTTTTGGCCCATGCATGTGTCGCTTGTTTGTGCATCTTCTATTATTTTTTGTTTCTCCTTCTACCTCTGTTGAAAGATAAGCTCAAATGATATGAACTCGTTTTGGTTTTATATCCTTTTTTCATATCATTTTAAGCTTGGACCTTATAATTCTTGTGATCTGGGACTTAAAGTAATAATCAACCGATTTGTATTTGCCTTTGATATTAAGCGTGTAATCTTTATGACTTTCCATATTTCAGACTTTCAGTTTCTCTCTATTTTCAAATGGAAGTCATGGGGGGCTAACTTGGCGAGTTCTATGGCCTTGACTGGTATGTTTTTCTTTCAAATCTGACACTGTGCATACATGCTCATCGGCTGTCACTTTCACGAGAACTTGGGTTATAAGCTTTATGCTGCACGATGTGTAGGTATTTTGGCAATGCATAGAGAAAGAGGGAACTCTATAAAGTTGCAGAGCATCACTCATACTGCCATATCTAGTAAATATAATCGTGAGTTTTCTGGCATGGACTTTGAATCAGATTGGACAAGACACAGAAAGTCCTCTGCATTTGCTGCTCAAGTGATCCGTTCTGCAACTTCCTTTATGCCTTGGTCTTGCAGAATCCCAATTAGTAAAGGATATCACGAATTTCTTTAA ATGAACAGAAATCGACGCCTTCTTTTTTCCCCTCCACTCGTATTTCTTCACCAAAAGCAGAAGGAAATCCGAGGTCCAAGGTTCACGGAATTGCAGCAAACCGTGGAAAGTGAAATCCAGGTAGAGTTTGATTGTTGTTGTTCTAAGAGAAGCGCGCTAATGGCTTCCACAAGTTTTGTTTGTGACTTTCAGTTTCTCTCTATTTTCAAATGGAAGTCATGGGGGGCTAACTTGGCGAGTTCTATGGCCTTGACTGGTATTTTGGCAATGCATAGAGAAAGAGGGAACTCTATAAAGTTGCAGAGCATCACTCATACTGCCATATCTAGTAAATATAATCGTGAGTTTTCTGGCATGGACTTTGAATCAGATTGGACAAGACACAGAAAGTCCTCTGCATTTGCTGCTCAAGTGATCCGTTCTGCAACTTCCTTTATGCCTTGGTCTTGCAGAATCCCAATTAGTAAAGGATATCACGAATTTCTTTAA ATGAACAGAAATCGACGCCTTCTTTTTTCCCCTCCACTCGTATTTCTTCACCAAAAGCAGAAGGAAATCCGAGGTCCAAGGTTCACGGAATTGCAGCAAACCGTGGAAAGTGAAATCCAGGTAGAGTTTGATTGTTGTTGTTCTAAGAGAAGCGCGCTAATGGCTTCCACAAGTTTTGTTTGTGACTTTCAGTTTCTCTCTATTTTCAAATGGAAGTCATGGGGGGCTAACTTGGCGAGTTCTATGGCCTTGACTGGTATTTTGGCAATGCATAGAGAAAGAGGGAACTCTATAAAGTTGCAGAGCATCACTCATACTGCCATATCTAGTAAATATAATCGTGAGTTTTCTGGCATGGACTTTGAATCAGATTGGACAAGACACAGAAAGTCCTCTGCATTTGCTGCTCAAGTGATCCGTTCTGCAACTTCCTTTATGCCTTGGTCTTGCAGAATCCCAATTAGTAAAGGATATCACGAATTTCTTTAA
BLAST of CmoCh12G000550 vs. TrEMBL
Match: A0A0A0KD56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G365200 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 7.9e-36 Identity = 85/120 (70.83%), Postives = 93/120 (77.50%), Query Frame = 1
BLAST of CmoCh12G000550 vs. TrEMBL
Match: A0A0R0INM3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G103500 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 8.5e-14 Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 1
BLAST of CmoCh12G000550 vs. TrEMBL
Match: A0A151SDQ2_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_025157 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.5e-13 Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1
BLAST of CmoCh12G000550 vs. TrEMBL
Match: K7LS04_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G249400 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.5e-13 Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 1
BLAST of CmoCh12G000550 vs. TrEMBL
Match: A0A151U8T8_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_019884 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.2e-13 Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 1
BLAST of CmoCh12G000550 vs. NCBI nr
Match: gi|700192416|gb|KGN47620.1| (hypothetical protein Csa_6G365200 [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35 Identity = 85/120 (70.83%), Postives = 93/120 (77.50%), Query Frame = 1
BLAST of CmoCh12G000550 vs. NCBI nr
Match: gi|297738425|emb|CBI27626.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 50/82 (60.98%), Postives = 56/82 (68.29%), Query Frame = 1
BLAST of CmoCh12G000550 vs. NCBI nr
Match: gi|947094073|gb|KRH42658.1| (hypothetical protein GLYMA_08G103500 [Glycine max]) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-13 Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 1
BLAST of CmoCh12G000550 vs. NCBI nr
Match: gi|1012341750|gb|KYP52950.1| (hypothetical protein KK1_025157, partial [Cajanus cajan]) HSP 1 Score: 83.6 bits (205), Expect = 3.5e-13 Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1
BLAST of CmoCh12G000550 vs. NCBI nr
Match: gi|947082675|gb|KRH31464.1| (hypothetical protein GLYMA_11G249400 [Glycine max]) HSP 1 Score: 83.6 bits (205), Expect = 3.5e-13 Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |