CmoCh11G017700 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTTGTTCATCCCTCCACAGAAGAAGACGCTCACCCGCAGTGTGCCAGTGAGGACGCTGAGCCATGAAATGGCACAGGAAGCTGATCTTCCTGGCTTTAGATTCCACCCCACAGAAGAAGAACTCCTTGAATTTTACCTGAAACATGTTGTTTCTGGCAAGAAGCTGCAATTTGATCCTATTGGGACTCTTAATCTTTATCTCCATGATCCTTGGGAGTTGCCTGGTTTGTGTTCTTGAAAAAAAATTAGCTCAATTGTTTAATGTTTTGTTTTGATTCAATGAGGTGAAATGTGATGTGAATTATTGTGTTTTTTTGTGTATAGGATTGGCAAAGAATGGAGAGAGGGAGTGGTACTTTTTTGTGCCAAGAGATAGGAGGCTAGGTGGGGGTGGGAGGCCGAACCGAACCACGAAAAACGGTTATTGGAAAGCCACTGGGTCCGACCGAAAAATCGTTAGATTATTGGATCCGAAGCGACTCGTTGGATTGAGAAAGACACTTGTGTTCTACTTAGGAAGAGCGAGTAGAGGAATTAAGACTGATTGGATCATGAATGAATATCGTTTTTCTGATAACTCTCCGTTGTCAAAGGTATCTATCTCGATCTTACTTGAAAAGAGTTTCGTGTTTGGTAACCGTTTCTTGTGGAAGAAGAAACAAACATGAAACGAGAATAAGAACGTTATTAAACGAACTCTTGCTATTCATCTTAGTATGAAGATTCTATAAGTTTTTGTCATCATTCATCGTGTTTGGTAACAATTATTTCGTTCTTTAATAAACCCTATTGGTAACTGACGTGGGATCTCACAATCCACCCCCTTTCGGGACCCGACATCCTTGTTGGCACACCGCCCAGTGTCCACTCCCTTCGAGACTCAGTGTCCTCGCTGGCACATTGCCCTCTCTCAAATTCAAATCGATGTGGGATCTCACAAAATAAACATGAAACGGAAACAGGAACGTTACCAAACGAGCTCTTGCTATTCATCTTTCTATCTTTTGTAATCATTCATTCGTGTTTGGTAGCCGTTTCTTGTAGAAGAAAAAACAAACATGAAACGAAAACACGAACGTTACCAAACGAGCTCTTACGATTCAGCTTTTGTAATCATTCATTCTTGTTTACATTCTTTGTAATGCAGGACATGGTGCTATGCAAAATCTATAGGAAAGCAACTTCGTTGAAAGTCCTAGAGCAAAGGGCAGCCATGGAGGAGGAAGATGCTAGGCTTTTTCAAGCTTCTTTGCAAATTCCATCAGAGCTGAACAACCTGACTGAGCCTCAAGTTCCAAACCTGAACATGGACTGGTCCCAAGACCTACTTTGGTCCCAATCCAGTAGTCCATGGCTCCAAACTTTGACCCCATCTGCCAGTTTGCTCAATTTCTAATGTTTTCATCGAGAGCTCGGTTATTTGTTCTAAATCTCGAGTGCCTAGTGTCACAGTCATGCTTGTCATGCCCGTAACCGCATGCCTGTATCATGTCAAACTCTTATCTTACTTTCATGTTGTATTATTTTATCATTTTAGTAAAAACATGTCTATTCTTACCAGA ATGGCCTTGTTCATCCCTCCACAGAAGAAGACGCTCACCCGCAGTGTGCCAGTGAGGACGCTGAGCCATGAAATGGCACAGGAAGCTGATCTTCCTGGCTTTAGATTCCACCCCACAGAAGAAGAACTCCTTGAATTTTACCTGAAACATGTTGTTTCTGGCAAGAAGCTGCAATTTGATCCTATTGGGACTCTTAATCTTTATCTCCATGATCCTTGGGAGTTGCCTGGATTGGCAAAGAATGGAGAGAGGGAGTGGTACTTTTTTGTGCCAAGAGATAGGAGGCTAGGTGGGGGTGGGAGGCCGAACCGAACCACGAAAAACGGTTATTGGAAAGCCACTGGGTCCGACCGAAAAATCGTTAGATTATTGGATCCGAAGCGACTCGTTGGATTGAGAAAGACACTTGTGTTCTACTTAGGAAGAGCGAGTAGAGGAATTAAGACTGATTGGATCATGAATGAATATCGTTTTTCTGATAACTCTCCGTTGTCAAAGGACATGGTGCTATGCAAAATCTATAGGAAAGCAACTTCGTTGAAAGTCCTAGAGCAAAGGGCAGCCATGGAGGAGGAAGATGCTAGGCTTTTTCAAGCTTCTTTGCAAATTCCATCAGAGCTGAACAACCTGACTGAGCCTCAAGTTCCAAACCTGAACATGGACTGGTCCCAAGACCTACTTTGGTCCCAATCCAGTAGTCCATGGCTCCAAACTTTGACCCCATCTGCCAGTTTGCTCAATTTCTAATGTTTTCATCGAGAGCTCGGTTATTTGTTCTAAATCTCGAGTGCCTAGTGTCACAGTCATGCTTGTCATGCCCGTAACCGCATGCCTGTATCATGTCAAACTCTTATCTTACTTTCATGTTGTATTATTTTATCATTTTAGTAAAAACATGTCTATTCTTACCAGA ATGGCCTTGTTCATCCCTCCACAGAAGAAGACGCTCACCCGCAGTGTGCCAGTGAGGACGCTGAGCCATGAAATGGCACAGGAAGCTGATCTTCCTGGCTTTAGATTCCACCCCACAGAAGAAGAACTCCTTGAATTTTACCTGAAACATGTTGTTTCTGGCAAGAAGCTGCAATTTGATCCTATTGGGACTCTTAATCTTTATCTCCATGATCCTTGGGAGTTGCCTGGATTGGCAAAGAATGGAGAGAGGGAGTGGTACTTTTTTGTGCCAAGAGATAGGAGGCTAGGTGGGGGTGGGAGGCCGAACCGAACCACGAAAAACGGTTATTGGAAAGCCACTGGGTCCGACCGAAAAATCGTTAGATTATTGGATCCGAAGCGACTCGTTGGATTGAGAAAGACACTTGTGTTCTACTTAGGAAGAGCGAGTAGAGGAATTAAGACTGATTGGATCATGAATGAATATCGTTTTTCTGATAACTCTCCGTTGTCAAAGGACATGGTGCTATGCAAAATCTATAGGAAAGCAACTTCGTTGAAAGTCCTAGAGCAAAGGGCAGCCATGGAGGAGGAAGATGCTAGGCTTTTTCAAGCTTCTTTGCAAATTCCATCAGAGCTGAACAACCTGACTGAGCCTCAAGTTCCAAACCTGAACATGGACTGGTCCCAAGACCTACTTTGGTCCCAATCCAGTAGTCCATGGCTCCAAACTTTGACCCCATCTGCCAGTTTGCTCAATTTCTAA
BLAST of CmoCh11G017700 vs. Swiss-Prot
Match: NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana GN=NAC035 PE=1 SV=2) HSP 1 Score: 177.2 bits (448), Expect = 2.3e-43 Identity = 80/149 (53.69%), Postives = 106/149 (71.14%), Query Frame = 1
BLAST of CmoCh11G017700 vs. Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 6.1e-41 Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 1
BLAST of CmoCh11G017700 vs. Swiss-Prot
Match: FEZ_ARATH (Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39 Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = 1
BLAST of CmoCh11G017700 vs. Swiss-Prot
Match: NAC42_ARATH (Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana GN=JUB1 PE=1 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 5.8e-39 Identity = 77/163 (47.24%), Postives = 109/163 (66.87%), Query Frame = 1
BLAST of CmoCh11G017700 vs. Swiss-Prot
Match: NAC25_ARATH (NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.3e-38 Identity = 83/178 (46.63%), Postives = 104/178 (58.43%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TrEMBL
Match: A0A0A0K4U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G020910 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 3.5e-91 Identity = 180/283 (63.60%), Postives = 198/283 (69.96%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TrEMBL
Match: A0A061DXR1_THECC (NAC domain containing protein 36 OS=Theobroma cacao GN=TCM_006499 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 149/278 (53.60%), Postives = 181/278 (65.11%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TrEMBL
Match: R4NFU5_JATCU (NAC transcription factor 033 OS=Jatropha curcas GN=JCGZ_25336 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 4.1e-76 Identity = 143/210 (68.10%), Postives = 161/210 (76.67%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TrEMBL
Match: B9HQZ3_POPTR (No apical meristem family protein OS=Populus trichocarpa GN=POPTR_0009s14370g PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 4.5e-75 Identity = 156/283 (55.12%), Postives = 183/283 (64.66%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TrEMBL
Match: A0A0D2RTA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G257800 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.3e-74 Identity = 148/266 (55.64%), Postives = 175/266 (65.79%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TAIR10
Match: AT2G17040.1 (AT2G17040.1 NAC domain containing protein 36) HSP 1 Score: 259.2 bits (661), Expect = 2.5e-69 Identity = 117/166 (70.48%), Postives = 141/166 (84.94%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TAIR10
Match: AT2G02450.2 (AT2G02450.2 NAC domain containing protein 35) HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44 Identity = 80/149 (53.69%), Postives = 106/149 (71.14%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TAIR10
Match: AT5G39820.1 (AT5G39820.1 NAC domain containing protein 94) HSP 1 Score: 169.1 bits (427), Expect = 3.5e-42 Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TAIR10
Match: AT1G26870.1 (AT1G26870.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40 Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = 1
BLAST of CmoCh11G017700 vs. TAIR10
Match: AT2G43000.1 (AT2G43000.1 NAC domain containing protein 42) HSP 1 Score: 162.5 bits (410), Expect = 3.2e-40 Identity = 77/163 (47.24%), Postives = 109/163 (66.87%), Query Frame = 1
BLAST of CmoCh11G017700 vs. NCBI nr
Match: gi|449454271|ref|XP_004144879.1| (PREDICTED: protein FEZ-like [Cucumis sativus]) HSP 1 Score: 342.8 bits (878), Expect = 5.0e-91 Identity = 180/283 (63.60%), Postives = 198/283 (69.96%), Query Frame = 1
BLAST of CmoCh11G017700 vs. NCBI nr
Match: gi|659094098|ref|XP_008447882.1| (PREDICTED: protein FEZ-like [Cucumis melo]) HSP 1 Score: 329.7 bits (844), Expect = 4.3e-87 Identity = 156/181 (86.19%), Postives = 164/181 (90.61%), Query Frame = 1
BLAST of CmoCh11G017700 vs. NCBI nr
Match: gi|657980925|ref|XP_008382468.1| (PREDICTED: NAC transcription factor 29-like [Malus domestica]) HSP 1 Score: 308.1 bits (788), Expect = 1.4e-80 Identity = 158/283 (55.83%), Postives = 182/283 (64.31%), Query Frame = 1
BLAST of CmoCh11G017700 vs. NCBI nr
Match: gi|645261057|ref|XP_008236110.1| (PREDICTED: NAC transcription factor 29 [Prunus mume]) HSP 1 Score: 303.1 bits (775), Expect = 4.4e-79 Identity = 162/283 (57.24%), Postives = 186/283 (65.72%), Query Frame = 1
BLAST of CmoCh11G017700 vs. NCBI nr
Match: gi|802749915|ref|XP_012087679.1| (PREDICTED: NAC transcription factor 29-like [Jatropha curcas]) HSP 1 Score: 294.7 bits (753), Expect = 1.5e-76 Identity = 144/211 (68.25%), Postives = 162/211 (76.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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