CmoCh11G017510 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G017510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SecE/sec61-gamma subunit of protein translocation complex protein
Location	Cmo_Chr11 : 12342453 .. 12343677 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTATGTTTGTTTGTTTGTTTGTTTCACATTGAGTTTGTTAATGGATCAGTAGTAAGCATTTTTCTCTTTTGCAGTGGGCGTTATTAAACTCTTGCTCTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGTTAATCCTTTTCTCTCTCGGGATATATGTTTATTACTGTGAAAACATTGAGTTTGCTTAATCTTTCTCTCATTTTCTTTTTCTTAAATCTATAGGAATGGCTTCTCTTCCTCATTCGAATCGACCATTTCACGTTCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGGTACTTTCTATCATTTGAGACTTTTGAATTTGATTGCTCTTACAATCTGCTCATTTCAATTCTGGGTTTGTTACTTTAGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGTAATCTTTCACAACTCTTTCTCCCGTCCTTGTGGATTTTGGATCATTATGTCCAGGATTGTTTTGTTTTGAACCACAGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGGTATGGAGGCGAGATTAGTATGTTAAATAGTGCATTATAGGAGATTCATATAGGATGAAATACTTAAGTTATGATGGAAATTCACTGAATATTCTTTCTGAACTTTGGTGTTTATTCTTAATTCATCCAATTTAGTGCGTAAAATTTTCACTTTTTCTCTCTTGTTGGTGCAGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAATGAATTCTGGTACTTTTCACTTCTTGTTACAAAATACTCTCAGAAGTTAAACTTTTCTTTGCTGTTTTTAAATCGATGGTTGAGAGTGAGCGTTCTTGGTGTATATTAATGTTGTTGGAGATGTTTACACTAGCGTGTCTATGAAATCATGCCGTAAGGAAAGTATAGAGAATATTGTCTTCCATGATTCGCGCATTTGGATACAATTACGACCGTCC

mRNA sequence

ATGTATTGGGCGTTATTAAACTCTTGCTCTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGACCATTTCACGTTCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAATGAATTCTGGTACTTTTCACTTCTTGTTACAAAATACTCTCAGAAGTTAAACTTTTCTTTGCTGTTTTTAAATCGATGGTTGAGAGTGAGCGTTCTTGGTGTATATTAATGTTGTTGGAGATGTTTACACTAGCGTGTCTATGAAATCATGCCGTAAGGAAAGTATAGAGAATATTGTCTTCCATGATTCGCGCATTTGGATACAATTACGACCGTCC

Coding sequence (CDS)

ATGTATTGGGCGTTATTAAACTCTTGCTCTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGACCATTTCACGTTCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATGCTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTCATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAA

Homology

[Close]

BLAST of CmoCh11G017510 vs. TrEMBL
Match: A0A0A0K1C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G014540 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-55
Identity = 119/158 (75.32%), Postives = 130/158 (82.28%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 71
           MVI S LG  HIG+  LP S  P+HV +YNT RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 72  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 131
           GFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 132 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 168
           STLKTAT ALVLVALLIVALSSVDS LSY+LT ILRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of CmoCh11G017510 vs. TrEMBL
Match: A0A061DZS8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_006567 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-30
Identity = 80/159 (50.31%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISR--RGGHLYADRM 71
           MVIAS L  N  G+    +    F ++    +  + N ++  P+      RG  L    M
Sbjct: 1   MVIASRLLTNCSGLVHPSYHTLSFQLQ--RCQRTRCNCYKPYPSVFEEMPRGSFLRKPYM 60

Query: 72  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 131
             +  + G +  QL F+DELP EPF+L +I++++WG+RSLF FL EQP QLKYIEWPSFQ
Sbjct: 61  SRHVMSVGSNRHQLSFDDELPEEPFWLSLIRDSIWGVRSLFAFLVEQPGQLKYIEWPSFQ 120

Query: 132 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 169
           STLKTAT  LVLVA+LIVALSSVDSVL Y+L  +LRRT+
Sbjct: 121 STLKTATLTLVLVAMLIVALSSVDSVLCYVLALLLRRTT 157

[Close]

BLAST of CmoCh11G017510 vs. TrEMBL
Match: A0A067KAQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13078 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.8e-30
Identity = 78/140 (55.71%), Postives = 97/140 (69.29%), Query Frame = 1


Query: 32  NRPFHV-RYNTARLNKANIFQGLPTRISRRGGHLYADRMGFN-HAAS-GRDNQQLRFNDE 91
           N+PF + R+   + N     Q LP  I R     +  +   N H  S GRD+ QL +ND+
Sbjct: 22  NQPFRIQRHKEGKFNDGYAIQ-LPKMIPRGQIQYFPSKHSRNKHVLSIGRDDYQLNYNDD 81

Query: 92  LPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVA 151
           LP EPF L +IKE +W  +SLF+FL EQPSQLKYIEWPSFQSTLKTAT  LV+VALLIVA
Sbjct: 82  LPQEPFLLTLIKEAIWATKSLFLFLVEQPSQLKYIEWPSFQSTLKTATLTLVIVALLIVA 141

Query: 152 LSSVDSVLSYILTFILRRTS 169
           LSSVDS+L Y+L  +LRR++
Sbjct: 142 LSSVDSILCYLLALLLRRSA 160

[Close]

BLAST of CmoCh11G017510 vs. TrEMBL
Match: A0A0B0PFP2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_08953 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-29
Identity = 83/157 (52.87%), Postives = 102/157 (64.97%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGGHLYADRMG 71
           MVIAS L AN  G+    +      + RY   R +  N  Q    ++ R G  L   R  
Sbjct: 23  MVIASRLPANCSGLLYPSYHKLSVQLNRYQRTRFDCYNPNQPFYGKLCR-GSSLRKPRTS 82

Query: 72  FNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQS 131
            +  + G +  QL F+DELP EPF+L +++ET+WGLRSLF+FL EQPSQLKYIEWPSF S
Sbjct: 83  RHVVSVGSNRHQLSFDDELPEEPFWLSLVRETIWGLRSLFVFLVEQPSQLKYIEWPSFVS 142

Query: 132 TLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 168
           TLKTA   LVLVA LIVALSSVDS+L YIL  +LR+T
Sbjct: 143 TLKTAILTLVLVAGLIVALSSVDSILCYILALLLRKT 178

[Close]

BLAST of CmoCh11G017510 vs. TrEMBL
Match: A0A0D2PWM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G255200 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-29
Identity = 82/157 (52.23%), Postives = 101/157 (64.33%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGGHLYADRMG 71
           MVIAS L AN  G+    +      + RY   R +  N  Q    ++ R G  L      
Sbjct: 1   MVIASRLPANCSGLLYPSYHKLSVQLNRYQRTRFDCYNPNQPFYGKLCR-GSSLRKPHTS 60

Query: 72  FNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQS 131
            +  + G +  QL F+DELP EPF+L +++ET+WGLRSLF+FL EQPSQLKYIEWPSF S
Sbjct: 61  RHVVSVGSNRHQLSFDDELPEEPFWLSLVRETIWGLRSLFVFLVEQPSQLKYIEWPSFVS 120

Query: 132 TLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 168
           TLKTA   LVLVA LIVALSSVDS+L YIL  +LR+T
Sbjct: 121 TLKTAILTLVLVAGLIVALSSVDSILCYILALLLRKT 156

[Close]

BLAST of CmoCh11G017510 vs. TAIR10
Match: AT4G38490.1 (AT4G38490.1 unknown protein)

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 1


Query: 92  EPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSS 151
           EP +L ++++ VW  RSL  F+AEQPSQLKYIEWP+F STLKTAT +L LVA+ IVALSS
Sbjct: 77  EPLWLSLLRDMVWSTRSLLSFMAEQPSQLKYIEWPTFASTLKTATLSLCLVAVFIVALSS 136

Query: 152 VDSVLSYILTFILRR 167
           VD+ L YIL  ILR+
Sbjct: 137 VDAALCYILALILRK 151

[Close]

BLAST of CmoCh11G017510 vs. NCBI nr
Match: gi|449454231|ref|XP_004144859.1| (PREDICTED: uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 5.1e-55
Identity = 119/158 (75.32%), Postives = 130/158 (82.28%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 71
           MVI S LG  HIG+  LP S  P+HV +YNT RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 72  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 131
           GFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 132 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 168
           STLKTAT ALVLVALLIVALSSVDS LSY+LT ILRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]

BLAST of CmoCh11G017510 vs. NCBI nr
Match: gi|659094193|ref|XP_008447932.1| (PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 117/159 (73.58%), Postives = 129/159 (81.13%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 71
           MVI S LG +HIG+  LP     +HV RYN  RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 72  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 131
           GFNHAASG++ QQ  FNDE P EPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 132 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 169
           STLKTAT ALVLVALLIVALSSVDS LSY+LT +LRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]

BLAST of CmoCh11G017510 vs. NCBI nr
Match: gi|778723059|ref|XP_011658604.1| (PREDICTED: uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 5.4e-41
Identity = 87/125 (69.60%), Postives = 100/125 (80.00%), Query Frame = 1


Query: 12  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 71
           MVI S LG  HIG+  LP S  P+HV +YNT RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 72  GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 131
           GFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 132 STLKT 135
           ST+++
Sbjct: 121 STVRS 125

[Close]

BLAST of CmoCh11G017510 vs. NCBI nr
Match: gi|645260957|ref|XP_008236063.1| (PREDICTED: uncharacterized protein LOC103334862 [Prunus mume])

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31
Identity = 83/142 (58.45%), Postives = 106/142 (74.65%), Query Frame = 1


Query: 30  HSNRPFHVR-YNTARLNKANIFQGLPTRISRRGG--HLYADRMGFNHAAS-GRDNQQLRF 89
           H+  PF +R YN A+++  +    + +R + +GG  +L A R+G   AAS  RD++QL F
Sbjct: 20  HAKLPFGIRKYNGAKIDNYDSIS-MASRRAVKGGIQYLPARRVGTICAASVRRDHRQLSF 79

Query: 90  NDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALL 149
           +D+LP +P+FL ++KE  WGLRSLFIFL EQPSQLKYIEWP F+STLKTA+  LVLVALL
Sbjct: 80  DDDLPQDPYFLSLVKEAAWGLRSLFIFLVEQPSQLKYIEWPGFRSTLKTASLTLVLVALL 139

Query: 150 IVALSSVDSVLSYILTFILRRT 168
           IVALSS DS LSY+L  ILRRT
Sbjct: 140 IVALSSTDSALSYLLALILRRT 160

[Close]

BLAST of CmoCh11G017510 vs. NCBI nr
Match: gi|657980205|ref|XP_008382086.1| (PREDICTED: uncharacterized protein LOC103444905 isoform X1 [Malus domestica])

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31
Identity = 86/144 (59.72%), Postives = 105/144 (72.92%), Query Frame = 1


Query: 30  HSNRPFHVRY-NTARLNKANIFQGLPTRISRRGG----HLYADRMGFNHAAS-GRDNQQL 89
           H+  PF ++  N A++N  N    + +R   RGG    +L A R+G   AAS GRD++QL
Sbjct: 21  HAKLPFGIKQCNGAKINNCNDVL-VTSRWIVRGGRGIQYLTAHRVGTICAASVGRDHRQL 80

Query: 90  RFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVA 149
           R +D+ P EP+FL ++KE V GLRSLF+FL EQPSQLKYIEWP F+STLKTATF LVLVA
Sbjct: 81  RIDDDSPQEPYFLSLVKEAVRGLRSLFVFLVEQPSQLKYIEWPGFRSTLKTATFTLVLVA 140

Query: 150 LLIVALSSVDSVLSYILTFILRRT 168
           LLIVALSS DS LSY+L  ILRRT
Sbjct: 141 LLIVALSSTDSALSYLLALILRRT 163

The following BLAST results are available for this feature:

BLAST of CmoCh11G017510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G017510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1C8_CUCSA	3.5e-55	75.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G014540 PE=4 SV=1	[more]
A0A061DZS8_THECC	3.9e-30	50.31	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_006567 PE=3 SV=1	[more]
A0A067KAQ1_JATCU	8.8e-30	55.71	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13078 PE=3 SV=1	[more]
A0A0B0PFP2_GOSAR	1.1e-29	52.87	Uncharacterized protein OS=Gossypium arboreum GN=F383_08953 PE=4 SV=1	[more]
A0A0D2PWM6_GOSRA	4.3e-29	52.23	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G255200 PE=4 SV=1	[more]

BLAST of CmoCh11G017510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38490.1	1.9e-20	65.33	unknown protein	[more]

BLAST of CmoCh11G017510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454231\|ref\|XP_004144859.1\|	5.1e-55	75.32	PREDICTED: uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus]	[more]
gi\|659094193\|ref\|XP_008447932.1\|	1.4e-52	73.58	PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo]	[more]
gi\|778723059\|ref\|XP_011658604.1\|	5.4e-41	69.60	PREDICTED: uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus]	[more]
gi\|645260957\|ref\|XP_008236063.1\|	2.3e-31	58.45	PREDICTED: uncharacterized protein LOC103334862 [Prunus mume]	[more]
gi\|657980205\|ref\|XP_008382086.1\|	2.3e-31	59.72	PREDICTED: uncharacterized protein LOC103444905 isoform X1 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001901	Translocase_SecE/Sec61-g
IPR022943	SecE

Vocabulary: **Biological Process**
Term	Definition
GO:0006605	protein targeting
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006605	protein targeting
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0090351	seedling development
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009528	plastid inner membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G017510.1	CmoCh11G017510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 112..163 score: 1.
IPR022943	Preprotein translocase subunit SecE	HAMAP	MF_00422	SecE	coord: 107..162 score: 1
None	No IPR available	GENE3D	G3DSA:1.20.5.1030		coord: 109..164 score: 6.
None	No IPR available	PANTHER	PTHR37247	FAMILY NOT NAMED	coord: 78..168 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G017510	Cucsa.370390	Cucumber (Gy14) v1	cgycmoB1024
CmoCh11G017510	CmaCh11G013670	Cucurbita maxima (Rimu)	cmacmoB117
CmoCh11G017510	Cla015811	Watermelon (97103) v1	cmowmB117
CmoCh11G017510	Csa7G014540	Cucumber (Chinese Long) v2	cmocuB132
CmoCh11G017510	MELO3C013337	Melon (DHL92) v3.5.1	cmomeB091
CmoCh11G017510	ClCG02G003950	Watermelon (Charleston Gray)	cmowcgB094
CmoCh11G017510	CSPI07G01130	Wild cucumber (PI 183967)	cmocpiB131
CmoCh11G017510	Lsi11G012140	Bottle gourd (USVL1VR-Ls)	cmolsiB080
CmoCh11G017510	Cp4.1LG04g04860	Cucurbita pepo (Zucchini)	cmocpeB126
CmoCh11G017510	MELO3C013337.2	Melon (DHL92) v3.6.1	cmomedB097
CmoCh11G017510	CsaV3_7G001160	Cucumber (Chinese Long) v3	cmocucB0155
CmoCh11G017510	Cla97C02G030770	Watermelon (97103) v2	cmowmbB094
CmoCh11G017510	Bhi05G001457	Wax gourd	cmowgoB0115
CmoCh11G017510	CsGy7G000950	Cucumber (Gy14) v2	cgybcmoB877
CmoCh11G017510	Carg05717	Silver-seed gourd	carcmoB1365

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G017510	Wax gourd	cmowgoB0128
CmoCh11G017510	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh11G017510	Cucurbita moschata (Rifu)	cmocmoB116
CmoCh11G017510	Cucurbita moschata (Rifu)	cmocmoB119
CmoCh11G017510	Cucumber (Gy14) v1	cgycmoB0645
CmoCh11G017510	Cucurbita maxima (Rimu)	cmacmoB492
CmoCh11G017510	Cucurbita maxima (Rimu)	cmacmoB542
CmoCh11G017510	Cucurbita maxima (Rimu)	cmacmoB575
CmoCh11G017510	Wild cucumber (PI 183967)	cmocpiB104
CmoCh11G017510	Cucumber (Chinese Long) v2	cmocuB102
CmoCh11G017510	Melon (DHL92) v3.5.1	cmomeB079
CmoCh11G017510	Watermelon (Charleston Gray)	cmowcgB092
CmoCh11G017510	Watermelon (97103) v1	cmowmB114
CmoCh11G017510	Cucurbita pepo (Zucchini)	cmocpeB091
CmoCh11G017510	Cucurbita pepo (Zucchini)	cmocpeB093
CmoCh11G017510	Cucurbita pepo (Zucchini)	cmocpeB099
CmoCh11G017510	Bottle gourd (USVL1VR-Ls)	cmolsiB073
CmoCh11G017510	Cucumber (Gy14) v2	cgybcmoB150
CmoCh11G017510	Melon (DHL92) v3.6.1	cmomedB085
CmoCh11G017510	Silver-seed gourd	carcmoB0470
CmoCh11G017510	Cucumber (Chinese Long) v3	cmocucB0113
CmoCh11G017510	Watermelon (97103) v2	cmowmbB092