CmoCh11G017090 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G017090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Metal ion binding protein, putative
Location	Cmo_Chr11 : 12134972 .. 12137989 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCGTTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACACCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGCCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGTATATACCAATTTTTTGTGTTTATCTGCGTGTTTTGCTGATAGCAGTCGGTGAAAAAAGGGTTCCGAATTTGGTGAAGATTGCGAGCGCATGTTGATTTGGAAATCGCCCAATTTCTGGCCCTGTACCTAAGTAGTCAGATTAATTTTCAAGTTAAATTATGAACTTCACTATGTGTTCATCTTCAAAAGTAAATTTGGAAATCGCCCATGAACCAACCAATAAATCATACAAAAGTTAACTAACAAAACACTCACAATCATATCAAAGAAATGCCCAAGCATAATCACAAAAACACTCGAACCTAGTGCACAAGCTTGTTGAGAATTGTTGGAAGAGGAGTCCCACGTCGGTTAATTAAGGGGTTGATTATGAGTTTATAAGTAAAGAATACATCTCCATTGGTATGAGACCTCTATTGGTATGAGACCTTTTGGAGAAACCAAAAGCAAACTCAAGAGACTTTATGCTCTAAGTGGACAATATCGTTACGAAGGATCGTGTCCTAACCAAGCTTAGCAACAAAATGCCCAATCTTCCTGATTTAAATCATCCAACAAGATTAGAATAACTAATACTTGAAAAACAGTCTAATCCATCTACAAGAATGAGTATAGATAGTTAATTATCTTTTTTAAAATTTGGAAACTTAGCTAAAGTGGGTATTAAATGGACTAGTTATTTCAAGTATAGGGTTCAAAAAGTTCAAGGACTTGTTCACTTAATGGCAAAAATTGAATTTTCCCTTAATTCTTAAATATTTAAGTTGTTTATGAACTGTGCCCATTCTAGGATTTGCAGCATTAAAACTTTGAATTGCTTGAGGCTTCTCTAATGGTTAACTTTCGTTTCTGAAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGGTACATTGTCTTATCATCCTAACACCTTCTATGTCTTGTTGCTTGGTTTTTGTTAGTCGAATGGCTTTGAAACGTAGTTTTTTCTTTTCCTTTTTTTACAATGGATGAGCTGCTTTCTGTTGATGAGTCTACAACTTCGATTAGACCGAAATAAGATCATGGTGCTCTCAATTTTTGATGACTTCCGAAATGAGATTTGCTCTTCTTTTATCTCTACGAATTTGTTGAAGCTTATAATTGTAGGAGCGAGTTTGAGATACAGTTTTGAGAGTAGAGCTTTGTAACAGCCCAAGCTTACCGCTAGCAGATATTGTCCTCTTTTGACTACTTTCTCTTTCGGGCTTCCCTTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAGAATGATTCGTTCTCTTCCTCAACTGATGTGGGATCTCATAATCCACCCCCCTTTGGGGGCCAGCATCCCCGCTAGCACTCATTCCCTTCTCCAATTAATGTGGGACCCCCCAATTCACCCCCTTCGGATCCCAGCGTCCTTGTTGGCACACCGCCTCGTGTCCACTCCCCTTCGGGGCTTAGCCTCCTCGCTAGTACATTGTCTGGTGTCTAGTTCTGATACCATTTGTAACGGTCCAAGCCTACCGCTAGGAGATATTGTCCTCTTTGGGCTTTCCTTTCCCTCAAGGTTTTTAAAACGCAGGAAAGGTTTCCACACCCTTTATAAAGAATGTTTCGTTCTCCTCGTTGGCACTCGTTCCTCTCTCCAATCGATGTGACATCTCACATTTTAGTTGATCAACTTTTTTCTACAAGTACCTGAGTGTTTCCTCCCAAAGCATTTGTGATCTTAGGATTTTTAAAATTGCTTTTTGACTATGTGACCAAACAGCTAAGTTTGGAAAATGGGCTTTTATTAGTTAAAAGCACTTTTCATCGTTCTAAAAGCGGTACCAAACTCACTCTTAATGGATTACATTTGGTGCTTTGGTAGTACGGTACTTTATTTTACCCGACTCTTCTTATATCTCTGCCCATTCAATCAGCTCATCAAGTTAGATATTGCTATGCTATGCGTGTATATCTTTGTGTGGTCACTTCTTCGATGATATATCGAAAGCATTGAAATTTAGTATTATGTGCTGAAGCGAAAGGGAAGTGTTAAGTTAACTACAAAGTTCTAGTTCTTTTGAAGATCTTGAAGTATGCTAAGAGAGCACAAATGATGTATTAGCTTCTTTTCGAATTCAAGTTTAGTTATTGTTTGAAGTAAAATTGAAGTATAAAATTGCATATTCTTACATGTTCTTCTGCAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGGTTTGTATGATCATTAGTTGTTAGCAATCGACCCGTATTCTACCAACTCGCCTAAACGTTTTTTCTTCTTCTCCTCTTGTTCTAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAATGAAGAAGTTTTTGTTTAGGTACTCGTGATTGTGATTGTTAGAGTTGGAGAGGGAAAGAGAGAAAAAAAATGGAGAGAGATAGGGATAATAGGAGGCTATTTAAGAGCTCCATTGATCATGTCATGGAAGGTTGGACTATGGGGATTACATTCTTTGAAGTAAAATTTAAATGAGCCATTTGCTTTGAAACCAATAATGAGGTAAGGCCTCACGTAGTAAAGAATCTTATATGGGAC

mRNA sequence

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCGTTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACACCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGCCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAATGAAGAAGTTTTTGTTTAGGTACTCGTGATTGTGATTGTTAGAGTTGGAGAGGGAAAGAGAGAAAAAAAATGGAGAGAGATAGGGATAATAGGAGGCTATTTAAGAGCTCCATTGATCATGTCATGGAAGGTTGGACTATGGGGATTACATTCTTTGAAGTAAAATTTAAATGAGCCATTTGCTTTGAAACCAATAATGAGGTAAGGCCTCACGTAGTAAAGAATCTTATATGGGAC

Coding sequence (CDS)

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCGTTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACACCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGCCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAATGAAGAAGTTTTTGTTTAG

Homology

[Close]

BLAST of CmoCh11G017090 vs. TrEMBL
Match: A0A0A0LC88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829200 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-49
Identity = 128/187 (68.45%), Postives = 139/187 (74.33%), Query Frame = 1


Query: 1   MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFP  H     ++      PI   S SL + +NF +SAASFRHS + G    R L
Sbjct: 1   MASISTFPALHFPFSKSS------PIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVL 60

Query: 61  KKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSV 120
           K+ RAVE +ASVPE  VE E       + PAVTV VSPSD+LTMFFQAEGTLNESAIPSV
Sbjct: 61  KQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV 120

Query: 121 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 180
           T ALEQTEG + LKVQVVEGIASV LTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFE
Sbjct: 121 TGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFE 180

[Close]

BLAST of CmoCh11G017090 vs. TrEMBL
Match: B9GHP5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s34760g PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.8e-36
Identity = 100/187 (53.48%), Postives = 128/187 (68.45%), Query Frame = 1


Query: 2   ASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQ--SRG 61
           +++STF   HSV  P  A  TP P F   I+    + F     SF+H A+       S G
Sbjct: 3   STVSTFSALHSVCTP-NATRTPSPPFARRIT----TRFHGFPISFKHLALKKANDFYSHG 62

Query: 62  LKKRRAVEGEASVPEQEVEGEETP------AVTVSVSPSDMLTMFFQAEGTLNESAIPSV 121
           L++ R++E E  +PE+E + E+ P       V+V VSPSD LTM+FQAEGT+NE+AIP V
Sbjct: 63  LRRLRSLEEETQIPEEEQQQEDVPEQSEQQTVSVPVSPSDTLTMYFQAEGTMNETAIPKV 122

Query: 122 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 181
           T ALE TEG T LKV+V+EGIASVELTKQ T+Q+TGVASSL+E +QS+GFKLQTLNLSF+
Sbjct: 123 TNALEGTEGVTDLKVRVLEGIASVELTKQTTVQATGVASSLVELVQSSGFKLQTLNLSFQ 182

[Close]

BLAST of CmoCh11G017090 vs. TrEMBL
Match: F6HV23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01780 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.2e-34
Identity = 97/169 (57.40%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 26  IFRSSISLHTSSNFAVS-----------AASFRHSAVYGHRQSRGLKKRRAVEGEASVPE 85
           I ++SI  H +S  + S           A  F    V    +S G +K R+V  E  VPE
Sbjct: 13  ICKTSIHCHGASRHSSSFMKFPVHRNCAANCFGRLTVKNENRSHGSRKIRSVAEETLVPE 72

Query: 86  QE-VEGEETPAV----TVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQ 145
           +E  EGEE  +V    +V VSPSD+LTMFFQAEGT+NE+AIP+VT+ALE+TEG T LKVQ
Sbjct: 73  EEGEEGEEGSSVDQPVSVPVSPSDILTMFFQAEGTMNETAIPTVTKALEETEGITTLKVQ 132

Query: 146 VVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 179
           VVEGIASV LTKQ T+Q+TGVASSL+ETIQ +GFKLQTLNLSFED E++
Sbjct: 133 VVEGIASVALTKQTTVQATGVASSLVETIQGSGFKLQTLNLSFEDEEDI 181

[Close]

BLAST of CmoCh11G017090 vs. TrEMBL
Match: U3GQG9_MANES (EG2771 OS=Manihot esculenta GN=EG2771 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-32
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = 1


Query: 45  SFRHSAVYGHRQSR----GLKKRRAVEGEASVPEQEV------------EGEETPAVTVS 104
           SFRH  +    +S+     + K R+VE E  +PE+E             EG E   V+V 
Sbjct: 39  SFRHLTLKNSTKSKFPFSHVTKLRSVEEETQIPEEEQQQAQEQEEEPVQEGPEQQTVSVP 98

Query: 105 VSPSDMLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQST 164
           VSPSD+LTMFFQAEGT+NE+AIP+VT ALE+T+G T LKVQV+EGIASVELTKQ T+Q+T
Sbjct: 99  VSPSDILTMFFQAEGTMNETAIPTVTSALEETDGITNLKVQVLEGIASVELTKQTTVQAT 158

Query: 165 GVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 181
           GVASSL+E IQ +GFKLQTLNLSF D E+V V
Sbjct: 159 GVASSLVELIQGSGFKLQTLNLSFMDEEDVLV 190

[Close]

BLAST of CmoCh11G017090 vs. TrEMBL
Match: U3GNZ2_MANES (EG2771 OS=Manihot esculenta GN=EG2771 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-32
Identity = 89/153 (58.17%), Postives = 109/153 (71.24%), Query Frame = 1


Query: 45  SFRHSAVYGHRQSR----GLKKRRAVEGEASVPEQEV-------------EGEETPAVTV 104
           SFRH  +    +S+     + K R+VE E  +PE+E              EG E   V+V
Sbjct: 39  SFRHLTLKNSTKSKFPFSHVTKLRSVEEETQIPEEEEQQQAQEQEEEPVQEGPEQQTVSV 98

Query: 105 SVSPSDMLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQS 164
            VSPSD+LTMFFQAEGT+NE+AIP+VT ALE+T+G T LKVQV+EGIASVELTKQ T+Q+
Sbjct: 99  PVSPSDILTMFFQAEGTMNETAIPTVTSALEETDGITNLKVQVLEGIASVELTKQTTVQA 158

Query: 165 TGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 181
           TGVASSL+E IQ +GFKLQTLNLSF D E+V V
Sbjct: 159 TGVASSLVELIQGSGFKLQTLNLSFMDEEDVLV 191

[Close]

BLAST of CmoCh11G017090 vs. TAIR10
Match: AT5G14910.1 (AT5G14910.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.4e-32
Identity = 96/184 (52.17%), Postives = 125/184 (67.93%), Query Frame = 1


Query: 1   MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSA-ASFRHSAVYGH-RQSR 60
           MASI+    FHS  R  + N +   +   S +L    NF   A  + R+ +  G  +Q+R
Sbjct: 1   MASIAASSTFHSFCRTKSPNLSSTHLLPLSKNL----NFRTRAIGNSRNCSFAGFIKQNR 60

Query: 61  -GLKKRRAV-EGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEA 120
            GL+K  ++ EG   V   E + +E   V+V VSPSDMLTMFFQA+GTLNE+AIP+VT A
Sbjct: 61  LGLRKLSSIGEGGEGVAVAEEQPQE--TVSVPVSPSDMLTMFFQADGTLNEAAIPNVTRA 120

Query: 121 LEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNE 180
           L+  +G + LKVQV EG+A VEL KQ T+Q+TGVAS+L+ETIQ AGFKLQTLNLSFED++
Sbjct: 121 LQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGVASNLVETIQGAGFKLQTLNLSFEDDD 178

[Close]

BLAST of CmoCh11G017090 vs. NCBI nr
Match: gi|659085542|ref|XP_008443474.1| (PREDICTED: uncharacterized protein LOC103487059 [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 8.1e-51
Identity = 132/187 (70.59%), Postives = 140/187 (74.87%), Query Frame = 1


Query: 1   MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFP  H         P   P+ R S SL +S+NF +SAASFRHS V G    R L
Sbjct: 1   MASISTFPALH------LPFPNSSPVPRRSFSLPSSTNFTLSAASFRHSPVQGRSLPRFL 60

Query: 61  KKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSV 120
           K+ RAVE +ASVPE  VE E       + PAVTV VSPSD+LTMFFQAEGTLNESAIPSV
Sbjct: 61  KQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV 120

Query: 121 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 180
           TEALEQTEG T LKVQV EGIASV LTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFE
Sbjct: 121 TEALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFE 180

[Close]

BLAST of CmoCh11G017090 vs. NCBI nr
Match: gi|449459422|ref|XP_004147445.1| (PREDICTED: uncharacterized protein LOC101219347 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 9.9e-49
Identity = 128/187 (68.45%), Postives = 139/187 (74.33%), Query Frame = 1


Query: 1   MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFP  H     ++      PI   S SL + +NF +SAASFRHS + G    R L
Sbjct: 1   MASISTFPALHFPFSKSS------PIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVL 60

Query: 61  KKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSV 120
           K+ RAVE +ASVPE  VE E       + PAVTV VSPSD+LTMFFQAEGTLNESAIPSV
Sbjct: 61  KQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV 120

Query: 121 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 180
           T ALEQTEG + LKVQVVEGIASV LTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFE
Sbjct: 121 TGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFE 180

[Close]

BLAST of CmoCh11G017090 vs. NCBI nr
Match: gi|224060008|ref|XP_002300027.1| (hypothetical protein POPTR_0001s34760g [Populus trichocarpa])

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-35
Identity = 100/187 (53.48%), Postives = 128/187 (68.45%), Query Frame = 1


Query: 2   ASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQ--SRG 61
           +++STF   HSV  P  A  TP P F   I+    + F     SF+H A+       S G
Sbjct: 3   STVSTFSALHSVCTP-NATRTPSPPFARRIT----TRFHGFPISFKHLALKKANDFYSHG 62

Query: 62  LKKRRAVEGEASVPEQEVEGEETP------AVTVSVSPSDMLTMFFQAEGTLNESAIPSV 121
           L++ R++E E  +PE+E + E+ P       V+V VSPSD LTM+FQAEGT+NE+AIP V
Sbjct: 63  LRRLRSLEEETQIPEEEQQQEDVPEQSEQQTVSVPVSPSDTLTMYFQAEGTMNETAIPKV 122

Query: 122 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 181
           T ALE TEG T LKV+V+EGIASVELTKQ T+Q+TGVASSL+E +QS+GFKLQTLNLSF+
Sbjct: 123 TNALEGTEGVTDLKVRVLEGIASVELTKQTTVQATGVASSLVELVQSSGFKLQTLNLSFQ 182

[Close]

BLAST of CmoCh11G017090 vs. NCBI nr
Match: gi|743907693|ref|XP_011047279.1| (PREDICTED: uncharacterized protein LOC105141681 isoform X1 [Populus euphratica])

HSP 1 Score: 152.5 bits (384), Expect = 6.9e-34
Identity = 99/185 (53.51%), Postives = 125/185 (67.57%), Query Frame = 1


Query: 3   SISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQ--SRGL 62
           ++STF    SV  P  A  TP P F   I+    + F     SF+H A+       S GL
Sbjct: 4   TVSTFSALQSVCTP-NATRTPSPHFTRRIT----TRFHGFPISFKHLALKKANDFYSHGL 63

Query: 63  KKRRAVEGEASVPEQEV-----EGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTE 122
           ++ R++E E  +PE+E      E  E   V+V VSPSD LTM+FQAEGT+NE+AIP VT+
Sbjct: 64  RRLRSLEEETQIPEEEQQQDVPEQSEQQTVSVPVSPSDTLTMYFQAEGTMNETAIPKVTK 123

Query: 123 ALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDN 181
           ALE TEG T LKV+V+EGIASVELTKQ T+Q+TGVASSL+E +QS+GFKLQTLNLSF+D 
Sbjct: 124 ALEGTEGVTDLKVRVLEGIASVELTKQTTVQATGVASSLVELVQSSGFKLQTLNLSFQDV 183

[Close]

BLAST of CmoCh11G017090 vs. NCBI nr
Match: gi|731419249|ref|XP_002275276.3| (PREDICTED: uncharacterized protein LOC100264617 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 97/169 (57.40%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 26  IFRSSISLHTSSNFAVS-----------AASFRHSAVYGHRQSRGLKKRRAVEGEASVPE 85
           I ++SI  H +S  + S           A  F    V    +S G +K R+V  E  VPE
Sbjct: 54  ICKTSIHCHGASRHSSSFMKFPVHRNCAANCFGRLTVKNENRSHGSRKIRSVAEETLVPE 113

Query: 86  QE-VEGEETPAV----TVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQ 145
           +E  EGEE  +V    +V VSPSD+LTMFFQAEGT+NE+AIP+VT+ALE+TEG T LKVQ
Sbjct: 114 EEGEEGEEGSSVDQPVSVPVSPSDILTMFFQAEGTMNETAIPTVTKALEETEGITTLKVQ 173

Query: 146 VVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 179
           VVEGIASV LTKQ T+Q+TGVASSL+ETIQ +GFKLQTLNLSFED E++
Sbjct: 174 VVEGIASVALTKQTTVQATGVASSLVETIQGSGFKLQTLNLSFEDEEDI 222

The following BLAST results are available for this feature:

BLAST of CmoCh11G017090 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G017090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC88_CUCSA	6.9e-49	68.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829200 PE=4 SV=1	[more]
B9GHP5_POPTR	8.8e-36	53.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s34760g PE=4 SV=1	[more]
F6HV23_VITVI	8.2e-34	57.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01780 PE=4 SV=...	[more]
U3GQG9_MANES	1.5e-32	58.55	EG2771 OS=Manihot esculenta GN=EG2771 PE=2 SV=1	[more]
U3GNZ2_MANES	2.0e-32	58.17	EG2771 OS=Manihot esculenta GN=EG2771 PE=2 SV=1	[more]

BLAST of CmoCh11G017090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14910.1	2.4e-32	52.17	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of CmoCh11G017090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085542\|ref\|XP_008443474.1\|	8.1e-51	70.59	PREDICTED: uncharacterized protein LOC103487059 [Cucumis melo]	[more]
gi\|449459422\|ref\|XP_004147445.1\|	9.9e-49	68.45	PREDICTED: uncharacterized protein LOC101219347 [Cucumis sativus]	[more]
gi\|224060008\|ref\|XP_002300027.1\|	1.3e-35	53.48	hypothetical protein POPTR_0001s34760g [Populus trichocarpa]	[more]
gi\|743907693\|ref\|XP_011047279.1\|	6.9e-34	53.51	PREDICTED: uncharacterized protein LOC105141681 isoform X1 [Populus euphratica]	[more]
gi\|731419249\|ref\|XP_002275276.3\|	1.2e-33	57.40	PREDICTED: uncharacterized protein LOC100264617 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0045036	protein targeting to chloroplast
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G017090.1	CmoCh11G017090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 96..167 score: 8
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 106..169 score: 4.
None	No IPR available	PANTHER	PTHR35756	FAMILY NOT NAMED	coord: 1..177 score: 7.6
None	No IPR available	PANTHER	PTHR35756:SF1	SUBFAMILY NOT NAMED	coord: 1..177 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G017090	Cucsa.339420	Cucumber (Gy14) v1	cgycmoB0923
CmoCh11G017090	CmaCh11G014120	Cucurbita maxima (Rimu)	cmacmoB117
CmoCh11G017090	CmaCh14G006320	Cucurbita maxima (Rimu)	cmacmoB243
CmoCh11G017090	Cla017061	Watermelon (97103) v1	cmowmB078
CmoCh11G017090	Csa3G829200	Cucumber (Chinese Long) v2	cmocuB114
CmoCh11G017090	MELO3C009927	Melon (DHL92) v3.5.1	cmomeB116
CmoCh11G017090	ClCG10G014500	Watermelon (Charleston Gray)	cmowcgB078
CmoCh11G017090	CSPI03G39610	Wild cucumber (PI 183967)	cmocpiB116
CmoCh11G017090	Lsi03G014240	Bottle gourd (USVL1VR-Ls)	cmolsiB105
CmoCh11G017090	Cp4.1LG03g07670	Cucurbita pepo (Zucchini)	cmocpeB124
CmoCh11G017090	MELO3C009927.2	Melon (DHL92) v3.6.1	cmomedB125
CmoCh11G017090	CsaV3_3G042070	Cucumber (Chinese Long) v3	cmocucB0130
CmoCh11G017090	Cla97C10G197370	Watermelon (97103) v2	cmowmbB082
CmoCh11G017090	CsGy3G037180	Cucumber (Gy14) v2	cgybcmoB268
CmoCh11G017090	Carg05684	Silver-seed gourd	carcmoB1365
CmoCh11G017090	Carg09744	Silver-seed gourd	carcmoB0589

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G017090	CmoCh14G006420	Cucurbita moschata (Rifu)	cmocmoB092

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G017090	Melon (DHL92) v3.6.1	cmomedB120
CmoCh11G017090	Cucumber (Chinese Long) v3	cmocucB0094
CmoCh11G017090	Cucurbita pepo (Zucchini)	cmocpeB126
CmoCh11G017090	Cucurbita pepo (Zucchini)	cmocpeB131