CmoCh11G016840 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCAATATAAGAAACGGAAAAAGAATAGCGGTACGATCTTCTTGCCCCTTTTCCCTTCAGATCTGTCTCCTGAAGGCCCCGAATTCGAGAGGTAATCTAGTTTGGCTCCATTTTTCTTCAATCTTCAACTTTCAAGTTCAATTCTGTAGGATCTCCCGGGCAGATATCGATCGTTCTTAAATCTTTACGGATTTATTTTATTCATTTGCTGGGTACATTGCTATTGTTTATTCTTTTTGATCTTCCTCGTTGTTTGGATATGTATTGCTAATTCTTTTTGTTTGAATTTTATGTCTGCTATAATGGAAATTACCCTGGATTAGTTTGAATTTCTCATTGTTTGAGTTGAATGTCATCAGGAGGGTCAAAGTATTGTGGTAAAATGAATATTTATGATGTTTGTTTGTAGTCGCGTGCTATTTAGGTCGCTGTTTTCTGTTTATGATGATCATTTGGATTTTGTAGTGGAAGATCTTTTAAATCTATTTCAATGCATGCTGAATTTGTTTTTGAGATGTTCAATTTTCTAATTTTGAATGTTATCGATTGCCAGTTCTTTGATTGTTGCTCTTAGAGGGAAGTAGAAATGGGGTTGACCTTCACGAAGCTCTTCGGCAGACTCTTTTCTAAGAAAGAGATGCGCATTTTGATGGTGGGTCTTGATGCTGCTGGTAAGACCACGATCCTGTACAAGTTAAAGCTCGGAGAAATTGTTACCACCATCCCCACTATTGGTAAGTTTCTATTGATGAAACACAGAATTGGTTGCAACTTTTTTGAATTTCTTCTCAAAGTCCTTGACATGTTGAGGATTGTTAGGAGAGAGTCCCACGTTGGCTAATTTAGAGGATGATCATGGGTTTATAAGTAAAGAATACATCTCTATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAATCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGCGTGATTACTAACATGTTACCAGAGTCGTGCCCTTAATTTAGTCATGTCAATAGAACAAGTGTCGAACAAAGAAGTTGCTAGTCTTGAAGGTGTCGTCAAAAGTGACTCATGTGTCGAACAAAGGGTGTACTTAGTTCGAGGGCTCCAGAGAAAGGAGTCGAGACTTGATTAAGGGGAGGCTCTATGGTGTACTTTGTTTGATAGGAGGATTGTTGAGGATTGTTGGGAGGGAGTCCCACATTAGCTAATTTAGAGGATGATCATGAGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTCTTGGAGAAGCCCAAAGAAAACTCATGAGATCTTATGCTCAAAGTGCAATATCATACTATTGTGAAGATCCGTAATTCCCAACATGACATTGTTGTTAGAGAATTTTTAACAAAGAGGGGATTTAAGTGGCAAAGTTAGATAAAAAGTACTGCACAATGTTAAACAACCTCGCTTAGAGAACAGAGCGCATGCTTCTCTAACTTTATCTTCACCTCTCTTTAACGAGGAGCTGTTAAGGTCTGTTTATTTTTTTTGAGGTACCCCCACCGCTACGCATCATCCTTTTGTAGCTTGCCAGCAGATAATATTTTGACCTTTTTGATCAGTCCTCGCGGGAGCTGTAAGATTATTCTTTCTCTTGCTGCTGATCTCCTCAACGATCTTTGAAGACGAGCCCCGAGTTTGATATTTTCTCTATCCCAAACATCTGTGTTTTTCATTCTATTATTCCTTAAAGTTTTGGTATTTCCAAGATTGAACTGCCGTTAAAAAATGTGTCTTGTATCAAATCCATGACCCAAGACGAGCTGAAGCTGGTAGGAATTTGAGAGGTATCCCTTTTTACGCATAAAGCGAACTGAGAAGAACTTCTGTTCAATTCCTCTCTCAACACTTGAAGGAGTAAACGTCATTGGAAAAACCTCAAACTTTGTAACTGCCATAGTTCAAATCCCTTAGTGCCAGGGAGAGAACATGAACATTTTTTTGCATTGTTGTAGTTAATTGGGACATTTCTTCTTGGAATTCTTTCATTGGGGCCTAACATAAATTGGATCTCTGTAATGGAAAATGGGGGATATTTCAAATGATATTGTAGTCCAAATAGTTCAAGTGACGTCTTTCTTCAAAGCATTCGAACTATTGCATAAGGATCCTCACAAAACCATTGCGTAAATTTTACCAATATATCTATCGATTCTTTTCTTCAGGATTTAATGTGGAAACTGTAGAGTACAAGAACATCAGCTTTACCGTCTGGGATGTTGGTGGTCAGGACAAGGTGTGCATCTCTCTCTCTTCCCTTCCCCTGTATGTGTGAGGCAAGCTGTGTTCTTTTTATTAAACTAAAGAGAAATAGTTAATTTATTTTGAAATTAGCATTCCCTGTTTTTATATTCTGTAATGTACATAAAGTGGTCGATTTAATCGTCAACGTGCAGTCTTTTTTTAATTTTTTATTGTTGGTAATCTAGAGCGTGTGAAGTTTGAAACCTTTAGTTTGAGTTGTGTCCATATCCAACTTGCTTCTGATACTCCAACATTTGTGGGACATGTTATTAGATACTTGTTAAGCACGATAAATATGTATCATTTACTAGCTGAACAAATTGAATATGAGTTTGTCACTTGATGGGCACATGTACAATGAGCATAATAAAAACATGTCAAATTTAACAAAAAATTATTAGATACATGTTGAAGTGCTCAAAATTTTATTTATTTACAAGAATTATATGTGAACATAAATGAATGCCCCACTTTAAGTAATTATGCGTCATTTTAGGCCTTTGTTTGTACTTTATATGCTCATTAGAAGAAAAAAAAAGTTGTTTAGAATTGTTATGATTCTTAAAGTTTGACTATGGTTTTTCATTTCAAAAAGATCCGTCCACTTTGGAGGCACTATTTCCAGAATACACAGGGCCTTATTTTTGTTGTGGATAGCAATGATAGGGACCGAGTTGTCGAGGCAAGAGATGAGTTGCACAGGATGTTGAATGAGGTATATTAGTACCTGTTTACTGTGATGGTCTATTGCTATTTGTACTTCGTTCTTATTATAGCTTTATTCATCAATTGATTGGCTCTACTTTTTAATTGTTAACTTTATCTCTCAAGGTGGAGTGGATAGAGTTTTTTAGTAACGGCATAGCAGCATAGTAGCTCATAGAGTTTTAAAGCCCTTTTCTTCCATTTATGAGTCTTGTCTGATAGTGGTATTTTACATTCTAATGATTGCAGGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCAAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAGCTTGGTCTTCACTCTCTTCGTCAGCGCCACTGGTAAATTATTTGCTTTTGTCTCGTGTGGACATCTCATCGATTAGATCTGGTGGGCAGTATTATTTCTCTTGTCAAAACCTGTAACATTAACTGGAAGATGGTCTAAATTCACGTTTATTGATACATCTTCCTAAGTCAACTTGAGATCCCACGTCGGTTGGAGAGTAGAATGAAACATCCCTTATAAGAGTACAGAAACTTCTCGCTAACAGACGTTTTAAAATCGTGAGGTTGACGGTGATATGTAATGGGTCAAAGCAGACAATAACTGCTAGCGGTAGCCTTGGATTGTTACAAATGGTATCAGAGCCAGGTACTGGGCGGTGTGCCAGCGAGGATGCTAGACCCCGCCAAAGGAGAGTGAATTGTGAGATCCCACATCAGCTGAAGAGAGGACCGAAGCATTCCTTATAAGGGTGTAGAAATCTCTCTCTAATAGACGCGTTTTAAACCCGTGAGGTTGATAGTGATACATAATGAACCAAAGCGAACAATATCTGCTAGCAGTGGCCTTGGGCTGTTACATTTTATTATCCCGAAGTTGGAAAAGTGAAATGGTCAATATCCGTTAATCAAAGTTGCTTGCGCTCTATTAATATATTCATTCTACATTGTGCTTGGTTCCAGGTACATTCAGAGCACATGCGCGACATCTGGAGAGGGGCTCTACGAAGGTCTAGACTGGCTTTCCAACAACATTGCTAGCAAGGTAACTGCTTCTTGTATTAGATCTCAAAAAATAATTGTTTTGCTAGGTTCCGAGTCTCTTTGCATTAGCTATTCGTGCATGGATATTTGATTCTTATCTTCCCCTCTTTTAACTTGTTGAAATCCCTTACTCATCAGGCTTGAAGCGGTCAATGATTTGATGGTCGTTCAAACTCCCACGCCCTTCTTTGTTTAGTTTGTTTGTTTATCTCGGTGGTTGCCCTCAAGAGTCCTCATCGTTCTAGGACAAATAGTTTCGTTTGATTTAAGAGATAGTTTTAGTTGGGAAACATTTGGCTACACTTTAAATTTCACTCCAAGTTGTTAATTGCTGCTTGAAGCGTATACTTCTTGGCTCCTCGAAATGCATTATTGTACTGCTTTCGTATCGTTTAATACCAAGTCCAATCTTTTTTCTGATCGATATGATTATGAAATGTAATCGTGAGTATATCACATGATATAGATCATTGCATATAATCAATATTATATATCATTCTAAAATTACAGGAA GCCAATATAAGAAACGGAAAAAGAATAGCGGTACGATCTTCTTGCCCCTTTTCCCTTCAGATCTGTCTCCTGAAGGCCCCGAATTCGAGAGTTCTTTGATTGTTGCTCTTAGAGGGAAGTAGAAATGGGGTTGACCTTCACGAAGCTCTTCGGCAGACTCTTTTCTAAGAAAGAGATGCGCATTTTGATGGTGGGTCTTGATGCTGCTGGTAAGACCACGATCCTGTACAAGTTAAAGCTCGGAGAAATTGTTACCACCATCCCCACTATTGGATTTAATGTGGAAACTGTAGAGTACAAGAACATCAGCTTTACCGTCTGGGATGTTGGTGGTCAGGACAAGATCCGTCCACTTTGGAGGCACTATTTCCAGAATACACAGGGCCTTATTTTTGTTGTGGATAGCAATGATAGGGACCGAGTTGTCGAGGCAAGAGATGAGTTGCACAGGATGTTGAATGAGGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCAAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAGCTTGGTCTTCACTCTCTTCGTCAGCGCCACTGGTACATTCAGAGCACATGCGCGACATCTGGAGAGGGGCTCTACGAAGGTCTAGACTGGCTTTCCAACAACATTGCTAGCAAGGCTTGAAGCGGTCAATGATTTGATGGTCGTTCAAACTCCCACGCCCTTCTTTGTTTAGTTTGTTTGTTTATCTCGGTGGTTGCCCTCAAGAGTCCTCATCGTTCTAGGACAAATAGTTTCGTTTGATTTAAGAGATAGTTTTAGTTGGGAAACATTTGGCTACACTTTAAATTTCACTCCAAGTTGTTAATTGCTGCTTGAAGCGTATACTTCTTGGCTCCTCGAAATGCATTATTGTACTGCTTTCGTATCGTTTAATACCAAGTCCAATCTTTTTTCTGATCGATATGATTATGAAATGTAATCGTGAGTATATCACATGATATAGATCATTGCATATAATCAATATTATATATCATTCTAAAATTACAGGAA ATGGGGTTGACCTTCACGAAGCTCTTCGGCAGACTCTTTTCTAAGAAAGAGATGCGCATTTTGATGGTGGGTCTTGATGCTGCTGGTAAGACCACGATCCTGTACAAGTTAAAGCTCGGAGAAATTGTTACCACCATCCCCACTATTGGATTTAATGTGGAAACTGTAGAGTACAAGAACATCAGCTTTACCGTCTGGGATGTTGGTGGTCAGGACAAGATCCGTCCACTTTGGAGGCACTATTTCCAGAATACACAGGGCCTTATTTTTGTTGTGGATAGCAATGATAGGGACCGAGTTGTCGAGGCAAGAGATGAGTTGCACAGGATGTTGAATGAGGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCAAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAGCTTGGTCTTCACTCTCTTCGTCAGCGCCACTGGTACATTCAGAGCACATGCGCGACATCTGGAGAGGGGCTCTACGAAGGTCTAGACTGGCTTTCCAACAACATTGCTAGCAAGGCTTGA
BLAST of CmoCh11G016840 vs. Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 362.8 bits (930), Expect = 2.1e-99 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 361.7 bits (927), Expect = 4.7e-99 Identity = 177/181 (97.79%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3) HSP 1 Score: 361.3 bits (926), Expect = 6.2e-99 Identity = 177/181 (97.79%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 360.1 bits (923), Expect = 1.4e-98 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1
BLAST of CmoCh11G016840 vs. Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3) HSP 1 Score: 360.1 bits (923), Expect = 1.4e-98 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TrEMBL
Match: A0A0A0LD15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G837640 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.1e-98 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TrEMBL
Match: A0A067FFJ9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029675mg PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 8.1e-98 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TrEMBL
Match: A0A0A0LD11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G837590 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 8.1e-98 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TrEMBL
Match: G9HPX7_ARAHY (ADP-ribosylation factor OS=Arachis hypogaea GN=ARF PE=2 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 8.1e-98 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TrEMBL
Match: Q6S4R7_MEDSA (ADP-ribosylation factor OS=Medicago sativa GN=ARF1 PE=2 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 8.1e-98 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F) HSP 1 Score: 360.9 bits (925), Expect = 4.5e-100 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein) HSP 1 Score: 360.1 bits (923), Expect = 7.7e-100 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TAIR10
Match: AT5G14670.1 (AT5G14670.1 ADP-ribosylation factor A1B) HSP 1 Score: 359.4 bits (921), Expect = 1.3e-99 Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein) HSP 1 Score: 359.4 bits (921), Expect = 1.3e-99 Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 1
BLAST of CmoCh11G016840 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1) HSP 1 Score: 359.4 bits (921), Expect = 1.3e-99 Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 1
BLAST of CmoCh11G016840 vs. NCBI nr
Match: gi|659085668|ref|XP_008443537.1| (PREDICTED: ADP-ribosylation factor 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 366.3 bits (939), Expect = 3.1e-98 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. NCBI nr
Match: gi|659085648|ref|XP_008443527.1| (PREDICTED: ADP-ribosylation factor 1-like [Cucumis melo]) HSP 1 Score: 365.5 bits (937), Expect = 5.2e-98 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. NCBI nr
Match: gi|357495841|ref|XP_003618209.1| (ADP-ribosylation factor-like protein A1D [Medicago truncatula]) HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. NCBI nr
Match: gi|470137765|ref|XP_004304633.1| (PREDICTED: ADP-ribosylation factor 1 isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of CmoCh11G016840 vs. NCBI nr
Match: gi|659085662|ref|XP_008443534.1| (PREDICTED: ADP-ribosylation factor 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |