CmoCh11G016040 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G016040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr11 : 11484005 .. 11488526 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCACCTTCTTTGGGTTAAGTAACTTAATTTAGACACTAATCTGGATTTTCATTGGCCTATTAAACAAATTCTTTATTAGTTCTATAGTTTAAGAGAGAGAGAGATTGGAAGGGTGTTGTTTGGCACATGGGTTTTGCTGAAAGACGAGAATAATGCGAAGAGCGGCGTTAGTATTTGACTCCAATATTTTCCGGGAAAAAGAAAAATTTCCCGGGAAAATTTCCCAGAATCTTCTCTGATCAGCGAAGAACGATGTAGGGTTTGCTTCGAATTTTCCCTTCATTCAATGTAAGTTCACTTCCTTCGACATTGAGGAACTTTGATTTACAAGTTTTTGTGGGGATTTCTACACGAAGGGGCCATTGTCAAGTATTCAAACAGTACTAGTTCATACAGAATCTGGCTGTAAAGAGTGTTGATGTTTAATAAGAGTAGAATAATTTGCTTGAACAGTTACCTGACTAGAAATTTTTGCTTGAAGTTATAGAAAAATGAGATGAGGAGTCGATTTACTTAGTGTTTTGATGAAAGCATTAGTACTGAAGTGTTTTATTTGCCCCATTTCCTGTTGAAGTTATGGAGAAGTATATGATTGTTTGGCTTTACAGAGTTCATAATTTTCATGTTCTTGGCCTTTCTTTGTTTGGTATTTCGTTACAAACAATTTATTTCTCTGTTTTTTCGAGCTGAGTTTGTTCATGTTATAATGAAACTCAAGTGGAATTACACCCAATAGCTTTTCTTTTGTTCAGCTGTTTGTCTTCCACTCCAACATAGCTACAAACTTCAAAGGGACTGTCAATGGATGGGATTGAGGTTCAATCCAGAAACATCCACTTCCAATGGATATGGTCCATCAGCTCTCGTTTCTGTCCATCTAGGCAGCATCCAAGTAGAGATAGGAGTAGCAAACAGTCGAGGAGGAGCACGCCGCCATTAAACATGGAACTTGGTTTGGCATCAGTATTGTGAGATCCCGCATCAGTTGGGGAGGAGAACAAAGCATTCTTTATAAGCGTGTGGAAACCTCTCCCTAGTAGACACATTTTAAAAACCTTGAGGGAAAGCTTGAAAGAGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATTAGAGCCAAACACCAAGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGAGGAGAACGAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAACTCGAAAGGGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATCAAAGCCAAACACTAGGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGGTGGACACAAGGCGATGTGTACGCTAGACTCCGAAGGGGGGTAGATTGGAGGGTCCCACATCGATTGGAGAAGGGAATGAGTGCGAGTGAGGACGTTAGGCCTCAAAGGAGGGTGGATTGTGAGATCTCACATTAGTTGGGGAGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGATGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAAGCAGACGAATTTTAAAAACCTTGAGGAAAAGTCTAAAGAGGACAATATCTGCTAACGCTGGGCTTCTACACATCTTGCCCGCTGTATGTCATGTAGTTAATATTTTTTTCTCTTTCTTTTTTACTTTCCCTTTTCTCTATCTAGCAGGCTAACTGCGGGAACAAATGTCCTGCATGTTAGATGCTGAATATTACTTGTAACAATCTGCAGACATGTAAATGTTTACACAAAGAATCTAGATGCTATCTGGTGCATATGAACAGCAAAGGGATAACAATAAAATTTGCAAGGAGGCAACAAGGACAAGATAAGGTAGCTAACTGTCAGTAAACCTACACCTTTGGTTGCTTGAAGTACAGATACAAGCAAGAATTTAGGAAGAAAAAAACACTCTAGAGAAAAGATGAGCAATAAATGACTCAGAGTTCTTAAGTTGGAGACTTAGTGCTAAGGTAAACCCCCATATGAATAAGAGAGGGAGAAAAACATGATCTGGCATTGAGAAACTTAGTCACCAGCCTAGATGTTCAGTGTTACGGTCATGTTTGTCCAAGGTGTGTTGCCTATGGCCGTATGGCTGATATCCCGGTCTTGCTTGTCCAGGACGTGTTGTCCATGGTTGCATGCCTGTACCAAACCCCTTTTACACTTTCATCTTAGATAGGCCTTTACCATTTCAAGTTGGGTCAATACGGGGTGAATGACCGTTCACCAAAACCATGTCTACACTTGCAAGAGCTAAAATGCCCAAAAATGTATTGCAGGGGGATATGACTAGTTGTCACTTCTTCCTACCTTGAGTTATATGCTATTTAAGCCGTGATATTTCTTTATGTGCTTATAGTCATATAACGTTGCTTTCTTCAATTCTTCAAATCGTTTTCAAATGTATTTCCTCGCTCACGTTTTCTAAATCTTTTCTTGCAATGTAACTCGAGGCCCGAACATACGTCAACGTTGTTCACAACGTCCGAATTTCTGACGGTTGACTTGTTTGTTTGGTTAGAACAAGTATCACACAATTGCAAGAGTGCGATTGTGATACTTGGCAAACTACGGCAGTGTTGTCGTCATTAGTTCTAACTTTCAATACCTTCACATTGATCATAGTAATCAAATCATGAACCCAGATTTGCTACATGATAGCTATGTCTTAACTTCACCAAATTGGATTTCCTCTATGGAAGCTGTAATTTACTCTCTTATTCTAAATAATTCAACAATCCAAACAATTTTGGAACTGTGGGAACACAGCCAAATCCTCAATTCAAAGGTACAGTATATTAATAGATTACGTGTTCATCAGCCATTGAATATGAGAAATAGGAAATCCCTGAATTTCGAGATTTCCACGTGGAATTCACATGTCCACATCTTGATCATACATGGATCCAGCTACAGCCATACCCCACCAATGGACTCACATTTTACACAGTTTTGCATTTGTCTTAGAGTGGATGCCTTGTCTCTTGGTCTCCAAATGAGGCAACTCACTTTGTTTCTTAGTAACTTGTAGCTTAGCTGAAAATAAGGATGCTAACTTACTGACTTAAAGGTCATTGGTAGATTTTGATGGCAGATTGGCAGGCTTGTCAGTGCCCGTCAATCATAGTTATCGACAATGGTTGGGAAGAACATGTTCACAAACTATGTAGTGAACTCTTGATGAATATGTTGGCTTCAATGATAAGTTGAACGGAACGAAAAATACGGTATCTAGTCGTTATTGAAAATCCTGGCTTTAGTTGAATAAACTGATGTGTATCATCAGGTTATACTATTGATCTGATAAAGTTCTCTTGGTTGGATAATGAGTAGAGTATAAGGGAATGAATAGTTCAGCTGTGATATATTTGAACCTCAGATGAAGGACTCCCGGGCAGATAATGTGAGATCCCACATCGGATGGGGAGGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAGCATATGCATTTTAAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGATAGAATTGGGTTGTTACCAATGGTATCAGAGCCAGAGCCAGACACTGGGCCCCGAGGGGGGTGGACATGAGACAGTGTGCCAGCAAAGACGCTGGGCCCCGAAAGAGGTGGATTGGGGGTCCCACATCGATTGGAGAATGGAACGAGTGTCAGCGAGAACGTTGGGCACTGAAGGGGGGTGGTTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGGAAACCTCTCTCTAGCGAACGTGTTTTAGAAACCTTGAGGGGACCGTTAAGTATTCATTATCATAACCATTAGTGCTAATCATCTCTGCAGCCAACAATATCAAACAAGCATAACTTCTCTCTCAATCTATCTAGAATGACATGGTAGGCTTTCTAGATTAAACACTTTTTCTGATATAAGCAATCATGAGATTCTATCAACCAGTTTGGTTAGTGTTTGTTTGAAGAAAGATATGAGTATCTATATCTCTTTTTAAGTATGTCCATGGAGGATAGCTACACATTCAACACTGTGTCTGTGCAACCTAAACTCGACACGTATGCAAACTCATCACGCTATAAACTTCGACTTGGAGGTATTCGAACAACTCTCCTATTTTTCCACATGGTTTGATGTTGAAAATAATTTCCAACCAAATTTTTTGTAACTTTCTATATGTTTCTTTGCTCAGTTCTTCAAGATCATTCTAGGAATCCACTGAATTCCAACTCATTAACAGTTCCTCAAATATCTATACCTACTTTTAGTCCTCTATTTATGTCTCCTATGATGAGCTGA

mRNA sequence

CTCCACCTTCTTTGGGTTAAGTAACTTAATTTAGACACTAATCTGGATTTTCATTGGCCTATTAAACAAATTCTTTATTAGTTCTATAGTTTAAGAGAGAGAGAGATTGGAAGGGTGTTGTTTGGCACATGGGTTTTGCTGAAAGACGAGAATAATGCGAAGAGCGGCGTTAGTATTTGACTCCAATATTTTCCGGGAAAAAGAAAAATTTCCCGGGAAAATTTCCCAGAATCTTCTCTGATCAGCGAAGAACGATGTAGGGTTTGCTTCGAATTTTCCCTTCATTCAATCTGTTTGTCTTCCACTCCAACATAGCTACAAACTTCAAAGGGACTGTCAATGGATGGGATTGAGGTTCAATCCAGAAACATCCACTTCCAATGGATATGGTCCATCAGCTCTCGTTTCTGTCCATCTAGGCAGCATCCAAGTAGAGATAGGAGTAGCAAACAGTCGAGGAGGAGCACGCCGCCATTAAACATGGAACTTGGTTTGGCATCAGTATTGTGAGATCCCGCATCAGTTGGGGAGGAGAACAAAGCATTCTTTATAAGCGTGTGGAAACCTCTCCCTAGTAGACACATTTTAAAAACCTTGAGGGAAAGCTTGAAAGAGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATTAGAGCCAAACACCAAGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGAGGAGAACGAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAACTCGAAAGGGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATCAAAGCCAAACACTAGGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGGTGGACACAAGGCGATGTGTACGCTAGACTCCGAAGGGGGGTAGATTGGAGGGTCCCACATCGATTGGAGAAGGGAATGAGTGCGAGTGAGGACGTTAGGCCTCAAAGGAGGGTGGATTGTGAGATCTCACATTAGTTGGGGAGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGATGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAAGCAGACGAATTTTAAAAACCTTGAGGAAAAGTCTAAAGAGGACAATATCTGCTAACGCTGGGCTTCTACACATCTTGCCCGCTGTATGTCATGTAGTTAATATTTTTTTCTCTTTCTTTTTTACTTTCCCTTTTCTCTATCTAGCAGGCTAACTGCGGGAACAAATGTCCTGCATGTTAGATGCTGAATATTACTTGTAACAATCTGCAGACATGTAAATGTTTACACAAAGAATCTAGATGCTATCTGGTGCATATGAACAGCAAAGGGATAACAATAAAATTTGCAAGGAGGCAACAAGGACAAGATAAGGTAGCTAACTGTCAGTAAACCTACACCTTTGGTTGCTTGAAGTACAGATACAAGCAAGAATTTAGGAAGAAAAAAACACTCTAGAGAAAAGATGAGCAATAAATGACTCAGAGTTCTTAAGTTGGAGACTTAGTGCTAAGGTAAACCCCCATATGAATAAGAGAGGGAGAAAAACATGATCTGGCATTGAGAAACTTAGTCACCAGCCTAGATGTTCAGTGTTACGGTCATGTTTGTCCAAGGTGTGTTGCCTATGGCCGTATGGCTGATATCCCGGTCTTGCTTGTCCAGGACGTGTTGTCCATGGTTGCATGCCTGTACCAAACCCCTTTTACACTTTCATCTTAGATAGGCCTTTACCATTTCAAGTTGGGTCAATACGGGGTGAATGACCGTTCACCAAAACCATGTCTACACTTGCAAGAGCTAAAATGCCCAAAAATGTATTGCAGGGGGATATGACTAGTTGTCACTTCTTCCTACCTTGAGTTATATGCTATTTAAGCCGTGATATTTCTTTATGTGCTTATAGTCATATAACGTTGCTTTCTTCAATTCTTCAAATCGTTTTCAAATGTATTTCCTCGCTCACGTTTTCTAAATCTTTTCTTGCAATGTAACTCGAGGCCCGAACATACGTCAACGTTGTTCACAACGTCCGAATTTCTGACGGTTGACTTGTTTGTTTGGTTAGAACAAGTATCACACAATTGCAAGAGTGCGATTGTGATACTTGGCAAACTACGGCAGTGTTGTCGTCATTAGTTCTAACTTTCAATACCTTCACATTGATCATAGTAATCAAATCATGAACCCAGATTTGCTACATGATAGCTATGTCTTAACTTCACCAAATTGGATTTCCTCTATGGAAGCTGTAATTTACTCTCTTATTCTAAATAATTCAACAATCCAAACAATTTTGGAACTGTGGGAACACAGCCAAATCCTCAATTCAAAGGTACAGTATATTAATAGATTACGTGTTCATCAGCCATTGAATATGAGAAATAGGAAATCCCTGAATTTCGAGATTTCCACGTGGAATTCACATGTCCACATCTTGATCATACATGGATCCAGCTACAGCCATACCCCACCAATGGACTCACATTTTACACAGTTTTGCATTTGTCTTAGAGTGGATGCCTTGTCTCTTGGTCTCCAAATGAGGCAACTCACTTTGTTTCTTAGTAACTTGTAGCTTAGCTGAAAATAAGGATGCTAACTTACTGACTTAAAGGTCATTGGTAGATTTTGATGGCAGATTGGCAGGCTTGTCAGTGCCCGTCAATCATAGTTATCGACAATGGTTGGGAAGAACATGTTCACAAACTATGTAGTGAACTCTTGATGAATATGTTGGCTTCAATGATAAGTTGAACGGAACGAAAAATACGGTATCTAGTCGTTATTGAAAATCCTGGCTTTAGTTGAATAAACTGATGTGTATCATCAGGTTATACTATTGATCTGATAAAGTTCTCTTGGTTGGATAATGAGTAGAGTATAAGGGAATGAATAGTTCAGCTGTGATATATTTGAACCTCAGATGAAGGACTCCCGGGCAGATAATGTGAGATCCCACATCGGATGGGGAGGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAGCATATGCATTTTAAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGATAGAATTGGGTTGTTACCAATGGTATCAGAGCCAGAGCCAGACACTGGGCCCCGAGGGGGGTGGACATGAGACAGTGTGCCAGCAAAGACGCTGGGCCCCGAAAGAGGTGGATTGGGGGTCCCACATCGATTGGAGAATGGAACGAGTGTCAGCGAGAACGTTGGGCACTGAAGGGGGGTGGTTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGGAAACCTCTCTCTAGCGAACGTGTTTTAGAAACCTTGAGGGGACCGTTAAGTATTCATTATCATAACCATTAGTGCTAATCATCTCTGCAGCCAACAATATCAAACAAGCATAACTTCTCTCTCAATCTATCTAGAATGACATGGTAGGCTTTCTAGATTAAACACTTTTTCTGATATAAGCAATCATGAGATTCTATCAACCAGTTTGGTTAGTGTTTGTTTGAAGAAAGATATGAGTATCTATATCTCTTTTTAAGTATGTCCATGGAGGATAGCTACACATTCAACACTGTGTCTGTGCAACCTAAACTCGACACGTATGCAAACTCATCACGCTATAAACTTCGACTTGGAGTTCTTCAAGATCATTCTAGGAATCCACTGAATTCCAACTCATTAACAGTTCCTCAAATATCTATACCTACTTTTAGTCCTCTATTTATGTCTCCTATGATGAGCTGA

Coding sequence (CDS)

ATGTCCATGGAGGATAGCTACACATTCAACACTGTGTCTGTGCAACCTAAACTCGACACGTATGCAAACTCATCACGCTATAAACTTCGACTTGGAGTTCTTCAAGATCATTCTAGGAATCCACTGAATTCCAACTCATTAACAGTTCCTCAAATATCTATACCTACTTTTAGTCCTCTATTTATGTCTCCTATGATGAGCTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009630 gravitropism
biological_process GO:2000012 regulation of auxin polar transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G016040.1CmoCh11G016040.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G016040CmaCh11G015170Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G016040Carg15552Silver-seed gourdcarcmoB0502
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G016040Cucurbita pepo (Zucchini)cmocpeB111
CmoCh11G016040Cucurbita pepo (Zucchini)cmocpeB124
CmoCh11G016040Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G016040Cucurbita pepo (Zucchini)cmocpeB131
CmoCh11G016040Bottle gourd (USVL1VR-Ls)cmolsiB072
CmoCh11G016040Bottle gourd (USVL1VR-Ls)cmolsiB133
CmoCh11G016040Bottle gourd (USVL1VR-Ls)cmolsiB139
CmoCh11G016040Cucumber (Gy14) v2cgybcmoB032
CmoCh11G016040Cucumber (Gy14) v2cgybcmoB264
CmoCh11G016040Cucumber (Gy14) v2cgybcmoB693
CmoCh11G016040Melon (DHL92) v3.6.1cmomedB086
CmoCh11G016040Melon (DHL92) v3.6.1cmomedB120
CmoCh11G016040Melon (DHL92) v3.6.1cmomedB137
CmoCh11G016040Silver-seed gourdcarcmoB0020
CmoCh11G016040Silver-seed gourdcarcmoB0495
CmoCh11G016040Silver-seed gourdcarcmoB0589
CmoCh11G016040Cucumber (Chinese Long) v3cmocucB0094
CmoCh11G016040Cucumber (Chinese Long) v3cmocucB0126
CmoCh11G016040Cucumber (Chinese Long) v3cmocucB0148
CmoCh11G016040Watermelon (97103) v2cmowmbB114
CmoCh11G016040Watermelon (97103) v2cmowmbB122
CmoCh11G016040Watermelon (97103) v2cmowmbB124
CmoCh11G016040Wax gourdcmowgoB0091
CmoCh11G016040Wax gourdcmowgoB0105
CmoCh11G016040Cucurbita moschata (Rifu)cmocmoB042
CmoCh11G016040Cucurbita moschata (Rifu)cmocmoB079
CmoCh11G016040Cucurbita moschata (Rifu)cmocmoB092
CmoCh11G016040Cucumber (Gy14) v1cgycmoB0061
CmoCh11G016040Cucurbita maxima (Rimu)cmacmoB116
CmoCh11G016040Cucurbita maxima (Rimu)cmacmoB243
CmoCh11G016040Cucurbita maxima (Rimu)cmacmoB347
CmoCh11G016040Wild cucumber (PI 183967)cmocpiB112
CmoCh11G016040Cucumber (Chinese Long) v2cmocuB110
CmoCh11G016040Melon (DHL92) v3.5.1cmomeB129
CmoCh11G016040Watermelon (Charleston Gray)cmowcgB112
CmoCh11G016040Watermelon (97103) v1cmowmB102