CmoCh11G014660 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G014660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr11 : 10309596 .. 10310030 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA

mRNA sequence

ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA

Coding sequence (CDS)

ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA
BLAST of CmoCh11G014660 vs. TrEMBL
Match: A0A059BBS5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00973 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-17
Identity = 70/129 (54.26%), Postives = 83/129 (64.34%), Query Frame = 1

Query: 28  AVSARHLLEMPLPKVPEELPKPELP------SLSNPELPPLLKVELPPL------EKPKV 87
           +V AR LLE+ LP+VPE LPKPELP      SL  PELP L KVELP +      E P+V
Sbjct: 26  SVKARQLLELALPEVPE-LPKPELPHLPDIPSLPKPELPSLPKVELPSVPELPKPELPEV 85

Query: 88  PEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPK-DIP-IPS 143
           PE PKPELP LP +     PE+PE+P +PKPEL  LP +  LPKP LP+LPK ++P IP 
Sbjct: 86  PELPKPELPHLPDIVSLPKPELPEVPELPKPELPHLPNIPSLPKPELPSLPKVELPSIPE 145

BLAST of CmoCh11G014660 vs. TrEMBL
Match: B9S9H9_RICCO (Gamma-gliadin, putative OS=Ricinus communis GN=RCOM_0885370 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-17
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 1

Query: 15  SAFMLTSFDCFVIAVSARHLLEMPLPKVPE------ELPKPELPSLSNPELPPLLKVELP 74
           S+F L       I V AR LLE  LP+VP+      ELPKPELP+L   ELP L K E+P
Sbjct: 8   SSFFLLLLIALSIHVDARQLLETKLPEVPKPEFPKPELPKPELPTLPKTELPELPKPEVP 67

Query: 75  PLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKD 134
            L + +VPE PKPE+PK+P+LPK ++P+VPELP  P+   L++PK+  +PKP +P +P +
Sbjct: 68  KLPELQVPELPKPEVPKVPELPKLEIPKVPELPKFPELPKLEVPKVLKMPKPEMPKVP-E 127

Query: 135 IPIPSFNP-PH 139
           +P P   P PH
Sbjct: 128 LPKPELPPLPH 137

BLAST of CmoCh11G014660 vs. TrEMBL
Match: A0A059BAU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.2e-16
Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 1

Query: 28  AVSARHLLEMPLPKVPEELPKPELP------SLSNPELPPLLKVELPP---LEKPKVPEF 87
           +V AR LLE+ LP+VPE LPKPELP      SL  PELP L KVELP    L KP++P  
Sbjct: 26  SVEARQLLELALPEVPE-LPKPELPHLPDIPSLPKPELPSLPKVELPSVPELPKPELPTI 85

Query: 88  PKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPH 143
           PKPELP++P+LPK + P +P++ ++PKPEL ++P++  LPKP LP LP    IPS   P 
Sbjct: 86  PKPELPEVPELPKPESPHLPDIVSLPKPELPEVPEVPELPKPELPHLP---DIPSLPKPE 145

BLAST of CmoCh11G014660 vs. TrEMBL
Match: V4S987_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10030243mg PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15
Identity = 68/130 (52.31%), Postives = 83/130 (63.85%), Query Frame = 1

Query: 31  ARHLLEMPLPKVPE-ELPKPELPSLSNPELPPLLKVELPPLEKPKVPEFPKPELPKLPQL 90
           AR LLE  LP++P+ ELPK ELP L  PELP   KVELPPL KP++PE PKPELPK P+L
Sbjct: 1   ARLLLETALPEIPKPELPKFELPPLLKPELP---KVELPPLSKPELPEIPKPELPKAPEL 60

Query: 91  P---------KFDVPEVP--ELPNVPKPELLKLPKLTPLPKPVLPTLPKDIP----IPSF 145
           P         K +VPE+P  ELP  P+PEL +LP+   +PKP LP LP ++P    +P  
Sbjct: 61  PEIPEPKLPKKLEVPEIPQPELPEFPEPELPELPEFPEIPKPELPNLP-ELPFSPHLPEI 120

BLAST of CmoCh11G014660 vs. TrEMBL
Match: M5VLD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15
Identity = 70/160 (43.75%), Postives = 83/160 (51.88%), Query Frame = 1

Query: 27  IAVSARHLLEMPLPKVPE---------------ELPKPELPSLSNPELPPLLKVELPPLE 86
           +   AR LLE  LP+VPE               +LPKPELP L  PELP L K ELP L 
Sbjct: 1   MVAGARFLLETSLPQVPELPKPELPPLHKPELPQLPKPELPQLPKPELPTLPKPELPTLP 60

Query: 87  KPKVPEFPKPELPKLPQLPKFDVPE---------VPEL-----------PNVPKPELLKL 142
           KP++P  PKP+LP +P +P    PE         VPEL           P +PKPEL KL
Sbjct: 61  KPELPTLPKPKLPPVPHVPTLPKPEGLKLAEEPHVPELPKPELPPRPNFPTLPKPELPKL 120

BLAST of CmoCh11G014660 vs. TAIR10
Match: AT5G09530.1 (AT5G09530.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 77.4 bits (189), Expect = 8.0e-15
Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 1

Query: 36  EMPLPKVPE--ELPKPELPSL---SNPELPPLLKVELPPLEKPKVPEFPKPELPKLPQLP 95
           E+P P++P+  E+PKP+LP     S PE+P L++ E P  E PKVPE PKPELPKLP++P
Sbjct: 149 EIPKPELPKFPEIPKPDLPKFPENSKPEVPKLMETEKP--EAPKVPEIPKPELPKLPEVP 208

Query: 96  KFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPHTSTIK 144
           K + P+VPE   + KPEL K+P+L  +P+   P LPK   +P    P    I+
Sbjct: 209 KLEAPKVPE---IQKPELPKMPELPKMPEIQKPELPKLPEVPKLEAPKVPEIQ 256

BLAST of CmoCh11G014660 vs. TAIR10
Match: AT5G09520.1 (AT5G09520.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-13
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 1

Query: 3   TYFSTFASSLRLSAFMLTSFDCFV---IAVSARHLLEMPLPKVPE--ELPKPELPSLSNP 62
           T   +F++SL LS F++      +   ++V AR LLE P P++P   ELPKPE+P L   
Sbjct: 2   TLKKSFSASL-LSPFLIICLIALLSVPVSVGARRLLEEPKPEIPTFPELPKPEMPKLP-- 61

Query: 63  ELPPLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPL 122
                   E P LE PK+PE PKPE+PKLP++ K ++P  PELP +P+      PKL  L
Sbjct: 62  --------EFPKLELPKLPEIPKPEMPKLPEIQKPELPTFPELPKMPEFPKFDFPKLPEL 121

Query: 123 PKPVLPTLPKDIPIPSFNPP 138
           PK      P++  +P+F  P
Sbjct: 122 PK------PEETKVPAFTMP 124

BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|659110271|ref|XP_008455139.1| (PREDICTED: periaxin-like [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35
Identity = 105/197 (53.30%), Postives = 121/197 (61.42%), Query Frame = 1

Query: 1   MATY-FSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPEL 60
           MAT+  ST  + L L   M+ SFD  +++VSARHLLE PLP VPEELPKPE+P+L  PEL
Sbjct: 1   MATHRLSTLKAPLILGILMMMSFDFLIMSVSARHLLETPLPHVPEELPKPEIPTLPKPEL 60

Query: 61  PPLLKVE------LPPLEKPKVPEFPKPELPKLPQLPKF--------------------- 120
           PPL KVE      LPPLEKPKVPE PKPELPKLP+LPK                      
Sbjct: 61  PPLPKVELPPLPHLPPLEKPKVPELPKPELPKLPELPKVPNFDHSKVPEVPTIPKFDLPK 120

Query: 121 -----------DVPEVPELPNVPKPELLKL--------------PKLTPLPKPVLPTLPK 145
                      ++P++PELP+VPKPEL KL              P+L PLPKPVLPTLPK
Sbjct: 121 LAEVSDHLPKPELPKLPELPSVPKPELPKLPELPNIPKPELPKLPELPPLPKPVLPTLPK 180

BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|778724535|ref|XP_011658824.1| (PREDICTED: periaxin-like [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 96/178 (53.93%), Postives = 111/178 (62.36%), Query Frame = 1

Query: 4   YFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELPPLL 63
           Y + FA  L      + SFD F+ A SARHLLE PLPKVPEELPKPE+P+L  P+LPPL 
Sbjct: 6   YSTVFALHLIFGVLTMMSFDFFMTA-SARHLLETPLPKVPEELPKPEMPTLPKPQLPPLP 65

Query: 64  KVE------LPPLEKPKVPEFPKPELPKLPQ-----------------LPKFDV------ 123
           K E      LPPLEKPK+PE PK ELPK P+                 LPKFD+      
Sbjct: 66  KFELPPLPHLPPLEKPKLPELPKYELPKFPELPKVPSFDLSKIPEVPSLPKFDISKLPEV 125

Query: 124 --------PEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPHTSTIKP 145
                   P++PELPNVPKPEL KLP+L  LPKPVLPTLPKD+  PSF+PPH +T  P
Sbjct: 126 SNPPKSELPKLPELPNVPKPELPKLPELPLLPKPVLPTLPKDMSFPSFSPPHVTTSNP 182

BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|659110269|ref|XP_008455138.1| (PREDICTED: periaxin-like [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 4.4e-31
Identity = 102/211 (48.34%), Postives = 122/211 (57.82%), Query Frame = 1

Query: 1   MATY-FSTFASSLRLSAFMLT-SFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPE 60
           M+T+ +STFAS L     M+  SFD F++  SARHLLE PLPKVPEELPK E+P+L+ PE
Sbjct: 1   MSTHRYSTFASHLIFGVLMIMMSFDFFIMTASARHLLETPLPKVPEELPKLEIPTLAKPE 60

Query: 61  LPPLLKVELPPL------EKPKVPEFPKPEL-----------------PKLPQLPKFD-- 120
           LPPL K ELPPL      EKPK+PE  KPEL                 P++P +PKFD  
Sbjct: 61  LPPLPKFELPPLPHLPPLEKPKLPELSKPELPKLPELPKVPNLDLSKIPQVPSVPKFDLP 120

Query: 121 --------------------------VPEVPELPNVPKPEL--------------LKLPK 145
                                     +P++PELPNVPKPEL               KLP+
Sbjct: 121 KLSEVSNPPQSELPKSPELSNGLKPELPKLPELPNVPKPELPKLPELPNVPKPELPKLPE 180

BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|449438230|ref|XP_004136892.1| (PREDICTED: periaxin-like [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 7.5e-31
Identity = 97/192 (50.52%), Postives = 115/192 (59.90%), Query Frame = 1

Query: 6   STFASSLRLSAFMLT-SFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELPPLLK 65
           ST  +SL L   ++T SFD  +++VSARHLLE P+P  PE LPKPE+P+L   ELPPL K
Sbjct: 7   STLKASLVLGILIVTMSFDFLIMSVSARHLLETPIPHGPEGLPKPEIPTLPKSELPPLPK 66

Query: 66  VE------LPPLEKPKVPEFPKPELPKLPQLPKF-------------------------- 125
           VE      LPPLEKPKVPE PKPELPKLP+LPK                           
Sbjct: 67  VELPPLPHLPPLEKPKVPELPKPELPKLPELPKVPNFDHSKVPEIPTMPKFDLPKLAEVP 126

Query: 126 ------DVPEVPELPNVPKPELLKL--------------PKLTPLPKPVLPTLPKDIPIP 145
                 ++P++PELPN+PKPEL KL              P+L  LPKPVLP+LPKDIP P
Sbjct: 127 DHLPKPELPKLPELPNLPKPELPKLPELPNIPKPELPKVPELPSLPKPVLPSLPKDIPFP 186

BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|778724533|ref|XP_011658823.1| (PREDICTED: periaxin-like [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 2.8e-30
Identity = 97/178 (54.49%), Postives = 109/178 (61.24%), Query Frame = 1

Query: 1   MATY-FSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPEL 60
           MAT  FST    L L  FML +FD  ++ V AR+LLE PLP   EELPKPE+PSL N E 
Sbjct: 1   MATLRFSTLVFPLILGVFMLMNFDISIMTVDARYLLETPLP---EELPKPEIPSLPNLEF 60

Query: 61  PPLLKVELPPL------------EKPKVP------------------EFPKPELPKLPQL 120
           PPL KVELPPL            E PKVP                  E PKPE PK P+L
Sbjct: 61  PPLPKVELPPLPHLPPLEKPKLPELPKVPNLDHSKDSSNVPKLSEVSELPKPEFPKFPEL 120

Query: 121 PKF---DVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPHTSTIKP 145
           P F   +VP++PELPNVPKPEL KLP+  PLPKP   +LPKDIP PSFN PHT+TI P
Sbjct: 121 PNFPKPEVPKLPELPNVPKPELPKLPEFPPLPKPAFASLPKDIPYPSFNSPHTTTINP 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A059BBS5_EUCGR5.6e-1754.26Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00973 PE=4 SV=1[more]
B9S9H9_RICCO7.3e-1748.85Gamma-gliadin, putative OS=Ricinus communis GN=RCOM_0885370 PE=4 SV=1[more]
A0A059BAU3_EUCGR6.2e-1652.42Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1[more]
V4S987_9ROSI1.4e-1552.31Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10030243mg PE=... [more]
M5VLD6_PRUPE1.8e-1543.75Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G09530.18.0e-1546.90 hydroxyproline-rich glycoprotein family protein[more]
AT5G09520.17.5e-1340.71 hydroxyproline-rich glycoprotein family protein[more]
Match NameE-valueIdentityDescription
gi|659110271|ref|XP_008455139.1|1.0e-3553.30PREDICTED: periaxin-like [Cucumis melo][more]
gi|778724535|ref|XP_011658824.1|1.2e-3153.93PREDICTED: periaxin-like [Cucumis sativus][more]
gi|659110269|ref|XP_008455138.1|4.4e-3148.34PREDICTED: periaxin-like [Cucumis melo][more]
gi|449438230|ref|XP_004136892.1|7.5e-3150.52PREDICTED: periaxin-like [Cucumis sativus][more]
gi|778724533|ref|XP_011658823.1|2.8e-3054.49PREDICTED: periaxin-like [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G014660.1CmoCh11G014660.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33088FAMILY NOT NAMEDcoord: 1..144
score: 1.4

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None