CmoCh11G014660 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA
BLAST of CmoCh11G014660 vs. TrEMBL
Match: A0A059BBS5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00973 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 5.6e-17 Identity = 70/129 (54.26%), Postives = 83/129 (64.34%), Query Frame = 1
BLAST of CmoCh11G014660 vs. TrEMBL
Match: B9S9H9_RICCO (Gamma-gliadin, putative OS=Ricinus communis GN=RCOM_0885370 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.3e-17 Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 1
BLAST of CmoCh11G014660 vs. TrEMBL
Match: A0A059BAU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.2e-16 Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 1
BLAST of CmoCh11G014660 vs. TrEMBL
Match: V4S987_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10030243mg PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15 Identity = 68/130 (52.31%), Postives = 83/130 (63.85%), Query Frame = 1
BLAST of CmoCh11G014660 vs. TrEMBL
Match: M5VLD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15 Identity = 70/160 (43.75%), Postives = 83/160 (51.88%), Query Frame = 1
BLAST of CmoCh11G014660 vs. TAIR10
Match: AT5G09530.1 (AT5G09530.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 77.4 bits (189), Expect = 8.0e-15 Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 1
BLAST of CmoCh11G014660 vs. TAIR10
Match: AT5G09520.1 (AT5G09520.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 70.9 bits (172), Expect = 7.5e-13 Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 1
BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|659110271|ref|XP_008455139.1| (PREDICTED: periaxin-like [Cucumis melo]) HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35 Identity = 105/197 (53.30%), Postives = 121/197 (61.42%), Query Frame = 1
BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|778724535|ref|XP_011658824.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31 Identity = 96/178 (53.93%), Postives = 111/178 (62.36%), Query Frame = 1
BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|659110269|ref|XP_008455138.1| (PREDICTED: periaxin-like [Cucumis melo]) HSP 1 Score: 142.9 bits (359), Expect = 4.4e-31 Identity = 102/211 (48.34%), Postives = 122/211 (57.82%), Query Frame = 1
BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|449438230|ref|XP_004136892.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 142.1 bits (357), Expect = 7.5e-31 Identity = 97/192 (50.52%), Postives = 115/192 (59.90%), Query Frame = 1
BLAST of CmoCh11G014660 vs. NCBI nr
Match: gi|778724533|ref|XP_011658823.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 2.8e-30 Identity = 97/178 (54.49%), Postives = 109/178 (61.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |