CmoCh11G013820 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G013820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRalf-like 4, putative
LocationCmo_Chr11 : 9658128 .. 9658496 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACAATGAAGCTCTGCCTCTTTCTCCTTCTAGTCTTCGCCACCGTTTCTCCTCCATTCTCCTTTGCCTTCCATGAAACCTCCGACGGTTCATCCGCTTTCGACTATAGTTCCCAATACAGTTTTTTTGGTGGAGACTCTTCGGAAGCGATCACTGAAGATAGTCGGCGACAACTTTTCCAATATGGATTTGCCTATAATAGGGAAGCTCGCAGGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCCATCACTGGATGTGCTCGATTTACCGATTAA

mRNA sequence

ATGGAAACAATGAAGCTCTGCCTCTTTCTCCTTCTAGTCTTCGCCACCGTTTCTCCTCCATTCTCCTTTGCCTTCCATGAAACCTCCGACGGTTCATCCGCTTTCGACTATAGTTCCCAATACAGTTTTTTTGGTGGAGACTCTTCGGAAGCGATCACTGAAGATAGTCGGCGACAACTTTTCCAATATGGATTTGCCTATAATAGGGAAGCTCGCAGGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCCATCACTGGATGTGCTCGATTTACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGCTCTGCCTCTTTCTCCTTCTAGTCTTCGCCACCGTTTCTCCTCCATTCTCCTTTGCCTTCCATGAAACCTCCGACGGTTCATCCGCTTTCGACTATAGTTCCCAATACAGTTTTTTTGGTGGAGACTCTTCGGAAGCGATCACTGAAGATAGTCGGCGACAACTTTTCCAATATGGATTTGCCTATAATAGGGAAGCTCGCAGGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCCATCACTGGATGTGCTCGATTTACCGATTAA
Homology
[Close]
BLAST of CmoCh11G013820 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-15
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL          ARR +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 113 AITGCARFT 122
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmoCh11G013820 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = 1 

Query: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAI--TEDSRR 60
           M    L +F LL+ A V+   +  +  T         + Q      D  E++  +E +RR
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSC-----INGQGCIGEDDELESLMDSETNRR 60

Query: 61  QLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCA 120
           QL +          RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C 
Sbjct: 61  QLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCY 108

[Close]
BLAST of CmoCh11G013820 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 1 

Query: 46  GDSSEAITEDSRRQLFQYGFAYNRE--ARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRR 105
           G   E I E+     F+     NR   A +++++Y AL KN++PC RRG SYY+CK   +
Sbjct: 43  GSIGECIAEEEE---FELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQ 102

Query: 106 INPYRRGCAAITGC 118
            NPY RGC+AIT C
Sbjct: 103 ANPYSRGCSAITRC 113

[Close]
BLAST of CmoCh11G013820 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-09
Identity = 43/111 (38.74%), Postives = 55/111 (49.55%), Query Frame = 1 

Query: 14  FATVSPPFSFAFHET---SDGSSAFDYSSQYSFFGGDSSEAITEDSRRQLFQYGFAYNRE 73
           FA   PPF      T      S+A        + GG+  E    DS           NR 
Sbjct: 36  FAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSE---------INRR 95

Query: 74  --ARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
             A RR+++Y AL +N IPC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 96  ILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmoCh11G013820 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-09
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 24  AFHETSDGSSAFDY-----SSQYSFFGGDSSEAITEDSRRQLFQYGFAYNREARRRFLTY 83
           A   T D   + D+     SS +S   G  +E I E+   + F    +    A++++++Y
Sbjct: 20  AVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISY 79

Query: 84  YALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
            A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 80  GAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmoCh11G013820 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.8e-23
Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 1 

Query: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITEDSRRQL 60
           M + KLCLFLLL+ A V+ P   A  +  D + ++     Y F   +      EDSRR L
Sbjct: 1   MRSTKLCLFLLLI-AVVAAPLCLALSD--DWTRSYADVPDYDFTNSN------EDSRRLL 60

Query: 61  FQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAY +  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARF 112

Query: 121 TD 123
           TD
Sbjct: 121 TD 112

[Close]
BLAST of CmoCh11G013820 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.6e-19
Identity = 63/121 (52.07%), Postives = 77/121 (63.64%), Query Frame = 1 

Query: 4   MKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITE--DSRRQLF 63
           MKL L LLL+ A ++     A     D + A+  +  Y+F+G      I +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVAL---CDWTRAYG-NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 123
           QYGFAY +  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmoCh11G013820 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-14
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL          ARR +++Y AL KNN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 113 AITGCARFT 122
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmoCh11G013820 vs. TrEMBL
Match: A0A078FRQ3_BRANA (BnaA05g09880D protein OS=Brassica napus GN=BnaA05g09880D PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-13
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL          ARRR+++Y AL KNN+PC RRG SYYDC KR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRRYISYGALKKNNVPCSRRGRSYYDCTKRKRANPYRRGCS 109

Query: 113 AITGCARFT 122
            IT C R T
Sbjct: 110 IITHCYRLT 109

[Close]
BLAST of CmoCh11G013820 vs. TrEMBL
Match: M4CMN5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-13
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL          ARRR+++Y AL KNN+PC RRG SYYDC KR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRRYISYGALKKNNVPCSRRGRSYYDCTKRKRANPYRRGCS 109

Query: 113 AITGCARFT 122
            IT C R T
Sbjct: 110 IITHCYRLT 109

[Close]
BLAST of CmoCh11G013820 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL          ARR +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 113 AITGCARFT 122
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmoCh11G013820 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14
Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = 1 

Query: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAI--TEDSRR 60
           M    L +F LL+ A V+   +  +  T         + Q      D  E++  +E +RR
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSC-----INGQGCIGEDDELESLMDSETNRR 60

Query: 61  QLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCA 120
           QL +          RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C 
Sbjct: 61  QLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCY 108

[Close]
BLAST of CmoCh11G013820 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-11
Identity = 43/111 (38.74%), Postives = 55/111 (49.55%), Query Frame = 1 

Query: 14  FATVSPPFSFAFHET---SDGSSAFDYSSQYSFFGGDSSEAITEDSRRQLFQYGFAYNRE 73
           FA   PPF      T      S+A        + GG+  E    DS           NR 
Sbjct: 36  FAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSE---------INRR 95

Query: 74  --ARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
             A RR+++Y AL +N IPC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 96  ILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmoCh11G013820 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-11
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1 

Query: 24  AFHETSDGSSAFDY-----SSQYSFFGGDSSEAITEDSRRQLFQYGFAYNREARRRFLTY 83
           A   T D   + D+     SS +S   G  +E I E+   + F    +    A++++++Y
Sbjct: 20  AVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISY 79

Query: 84  YALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
            A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 80  GAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmoCh11G013820 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-09
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 1 

Query: 3   TMKLCLFLLLVFATVSPPFSFAFHE--------TSDGSSAFDYSSQYSFFGGDSSEAITE 62
           T+ L L +L+VF   SPP    F          T+  + +  + S     G +  E  +E
Sbjct: 6   TLFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDSE 65

Query: 63  DSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAI 118
            +RR L          A  ++++Y +L +N++PC RRG SYY+C+   + NPY RGC+ I
Sbjct: 66  INRRIL----------ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKI 118

[Close]
BLAST of CmoCh11G013820 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 1 

Query: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITEDSRRQL 60
           M + KLCLFLLL+ A V+ P   A  +  D + ++     Y F   +      EDSRR L
Sbjct: 1   MRSTKLCLFLLLI-AVVAAPLCLALSD--DWTRSYADVPDYDFTNSN------EDSRRLL 60

Query: 61  FQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAY +  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARF 112

Query: 121 TD 123
           TD
Sbjct: 121 TD 112

[Close]
BLAST of CmoCh11G013820 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-21
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 1 

Query: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITEDSRRQL 60
           M +MKL LFLL++ A V+ P   AF +  D + A+  +  Y F   +      EDSRR L
Sbjct: 1   MRSMKLGLFLLVI-AVVAAPLCLAFSD--DWTHAYA-APNYDFTTNN------EDSRRLL 60

Query: 61  FQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAY +  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARF 111

Query: 121 TD 123
           TD
Sbjct: 121 TD 111

[Close]
BLAST of CmoCh11G013820 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 9.5e-19
Identity = 63/121 (52.07%), Postives = 77/121 (63.64%), Query Frame = 1 

Query: 4   MKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITE--DSRRQLF 63
           MKL L LLL+ A ++     A     D + A+  +  Y+F+G      I +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVAL---CDWTRAYG-NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 123
           QYGFAY +  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmoCh11G013820 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-16
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1 

Query: 4   MKLCL-FLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSSEAITEDSRRQLFQ 63
           +KLCL FLLL  A V+   SF  H+ S G     + S   F G D+   +  ++ R+   
Sbjct: 3   VKLCLIFLLLALAVVAEASSF--HDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALA 62

Query: 64  YGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 123
            G        R++++Y AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  GG--------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

[Close]
BLAST of CmoCh11G013820 vs. NCBI nr
Match: gi|729376459|ref|XP_010549330.1| (PREDICTED: protein RALF-like 19 [Tarenaya hassleriana])

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-14
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL Q          RR+++Y AL KNN+PC RRG SYYDC++R+R+NPYRRGC+
Sbjct: 50  SETNRRQLAQ---------GRRYISYGALRKNNVPCSRRGRSYYDCRRRKRVNPYRRGCS 109

Query: 113 AITGCARFT 122
            IT CARFT
Sbjct: 110 VITHCARFT 109

The following BLAST results are available for this feature:
BLAST of CmoCh11G013820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF19_ARATH3.7e-1557.97Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1[more]
RLF4_ARATH2.7e-1341.80Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1[more]
RALF_TOBAC4.7e-1044.59Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF23_ARATH1.0e-0938.74Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
RLF22_ARATH1.0e-0934.65Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of CmoCh11G013820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHU4_CUCSA9.8e-2354.10Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1[more]
A0A0A0KCD7_CUCSA6.6e-1952.07F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1[more]
R0HVQ3_9BRAS8.3e-1459.42Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1[more]
A0A078FRQ3_BRANA1.9e-1357.97BnaA05g09880D protein OS=Brassica napus GN=BnaA05g09880D PE=4 SV=1[more]
M4CMN5_BRARP1.9e-1357.97Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of CmoCh11G013820 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33775.12.1e-1657.97 ralf-like 19[more]
AT1G28270.11.5e-1441.80 ralf-like 4[more]
AT3G16570.15.9e-1138.74 rapid alkalinization factor 23[more]
AT3G05490.15.9e-1134.65 ralf-like 22[more]
AT1G02900.11.5e-0931.71 rapid alkalinization factor 1[more]
BLAST of CmoCh11G013820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461879|ref|XP_004148669.1|1.4e-2254.10PREDICTED: protein RALF-like 19 [Cucumis sativus][more]
gi|659080853|ref|XP_008441015.1|2.7e-2154.92PREDICTED: protein RALF-like 19 [Cucumis melo][more]
gi|449466199|ref|XP_004150814.1|9.5e-1952.07PREDICTED: protein RALF-like 4 [Cucumis sativus][more]
gi|1009109354|ref|XP_015889777.1|2.0e-1645.00PREDICTED: protein RALF-like 19 [Ziziphus jujuba][more]
gi|729376459|ref|XP_010549330.1|3.2e-1457.97PREDICTED: protein RALF-like 19 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G013820.1CmoCh11G013820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 71..119
score: 1.6
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 43..121
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G013820Cucumber (Chinese Long) v3cmocucB0121
CmoCh11G013820Cucumber (Chinese Long) v3cmocucB0133
CmoCh11G013820Cucumber (Chinese Long) v3cmocucB0136
CmoCh11G013820Cucumber (Chinese Long) v3cmocucB0146
CmoCh11G013820Cucumber (Chinese Long) v3cmocucB0160
CmoCh11G013820Watermelon (97103) v2cmowmbB078
CmoCh11G013820Watermelon (97103) v2cmowmbB088
CmoCh11G013820Watermelon (97103) v2cmowmbB111
CmoCh11G013820Watermelon (97103) v2cmowmbB128
CmoCh11G013820Wax gourdcmowgoB0104
CmoCh11G013820Wax gourdcmowgoB0110
CmoCh11G013820Wax gourdcmowgoB0124
CmoCh11G013820Cucurbita moschata (Rifu)cmocmoB131
CmoCh11G013820Cucurbita moschata (Rifu)cmocmoB096
CmoCh11G013820Cucurbita moschata (Rifu)cmocmoB105
CmoCh11G013820Cucurbita moschata (Rifu)cmocmoB110
CmoCh11G013820Cucurbita moschata (Rifu)cmocmoB125
CmoCh11G013820Cucurbita moschata (Rifu)cmocmoB129
CmoCh11G013820Cucumber (Gy14) v1cgycmoB0624
CmoCh11G013820Cucumber (Gy14) v1cgycmoB0684
CmoCh11G013820Cucumber (Gy14) v1cgycmoB1084
CmoCh11G013820Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G013820Cucurbita maxima (Rimu)cmacmoB318
CmoCh11G013820Cucurbita maxima (Rimu)cmacmoB494
CmoCh11G013820Cucurbita maxima (Rimu)cmacmoB678
CmoCh11G013820Cucurbita maxima (Rimu)cmacmoB761
CmoCh11G013820Cucurbita maxima (Rimu)cmacmoB842
CmoCh11G013820Bottle gourd (USVL1VR-Ls)cmolsiB093
CmoCh11G013820Wild cucumber (PI 183967)cmocpiB120
CmoCh11G013820Wild cucumber (PI 183967)cmocpiB136
CmoCh11G013820Cucumber (Chinese Long) v2cmocuB107
CmoCh11G013820Cucumber (Chinese Long) v2cmocuB117
CmoCh11G013820Cucumber (Chinese Long) v2cmocuB137
CmoCh11G013820Melon (DHL92) v3.5.1cmomeB085
CmoCh11G013820Melon (DHL92) v3.5.1cmomeB114
CmoCh11G013820Melon (DHL92) v3.5.1cmomeB128
CmoCh11G013820Melon (DHL92) v3.5.1cmomeB133
CmoCh11G013820Watermelon (Charleston Gray)cmowcgB088
CmoCh11G013820Watermelon (Charleston Gray)cmowcgB086
CmoCh11G013820Watermelon (Charleston Gray)cmowcgB109
CmoCh11G013820Watermelon (Charleston Gray)cmowcgB123
CmoCh11G013820Watermelon (97103) v1cmowmB081
CmoCh11G013820Watermelon (97103) v1cmowmB098
CmoCh11G013820Watermelon (97103) v1cmowmB106
CmoCh11G013820Watermelon (97103) v1cmowmB109
CmoCh11G013820Cucurbita pepo (Zucchini)cmocpeB087
CmoCh11G013820Cucurbita pepo (Zucchini)cmocpeB092
CmoCh11G013820Cucurbita pepo (Zucchini)cmocpeB095
CmoCh11G013820Cucurbita pepo (Zucchini)cmocpeB114
CmoCh11G013820Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G013820Bottle gourd (USVL1VR-Ls)cmolsiB103
CmoCh11G013820Bottle gourd (USVL1VR-Ls)cmolsiB108
CmoCh11G013820Bottle gourd (USVL1VR-Ls)cmolsiB113
CmoCh11G013820Bottle gourd (USVL1VR-Ls)cmolsiB116
CmoCh11G013820Bottle gourd (USVL1VR-Ls)cmolsiB140
CmoCh11G013820Cucumber (Gy14) v2cgybcmoB156
CmoCh11G013820Cucumber (Gy14) v2cgybcmoB270
CmoCh11G013820Cucumber (Gy14) v2cgybcmoB881
CmoCh11G013820Melon (DHL92) v3.6.1cmomedB091
CmoCh11G013820Melon (DHL92) v3.6.1cmomedB123
CmoCh11G013820Melon (DHL92) v3.6.1cmomedB139
CmoCh11G013820Melon (DHL92) v3.6.1cmomedB143
CmoCh11G013820Melon (DHL92) v3.6.1cmomedB146
CmoCh11G013820Silver-seed gourdcarcmoB0018
CmoCh11G013820Silver-seed gourdcarcmoB0256
CmoCh11G013820Silver-seed gourdcarcmoB0401
CmoCh11G013820Silver-seed gourdcarcmoB0508