CmoCh11G013810 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G013810
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRapid alkalinization factor 2
LocationCmo_Chr11 : 9652881 .. 9653249 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGTGAAGCTCTGCCTCTTTCTCCTCTTCGTCTTGGCTGTCGTTGCTCCTCCACTCTCCTTTGCCTACCATGAAACCTCCAACGATTCATCTTACGTCAACGATATTTCTAAATACAGCTTCTTTGGCGGAGACTCCTCGGAAGCCATGACTGAAGATAGTCGGCGACAACTTTTCCAATATGGATTCGCTTATAATAAGGAAGCTCGCAGGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACTGTGAAGCTCTGCCTCTTTCTCCTCTTCGTCTTGGCTGTCGTTGCTCCTCCACTCTCCTTTGCCTACCATGAAACCTCCAACGATTCATCTTACGTCAACGATATTTCTAAATACAGCTTCTTTGGCGGAGACTCCTCGGAAGCCATGACTGAAGATAGTCGGCGACAACTTTTCCAATATGGATTCGCTTATAATAAGGAAGCTCGCAGGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACTGTGAAGCTCTGCCTCTTTCTCCTCTTCGTCTTGGCTGTCGTTGCTCCTCCACTCTCCTTTGCCTACCATGAAACCTCCAACGATTCATCTTACGTCAACGATATTTCTAAATACAGCTTCTTTGGCGGAGACTCCTCGGAAGCCATGACTGAAGATAGTCGGCGACAACTTTTCCAATATGGATTCGCTTATAATAAGGAAGCTCGCAGGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA
Homology
[Close]
BLAST of CmoCh11G013810 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-15
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1 

Query: 6   LCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAM--TEDSRRQLFQY 65
           L +F L +LA+VA  ++  Y  T +  +    I +      D  E++  +E +RRQL + 
Sbjct: 6   LLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGE-----DDELESLMDSETNRRQLAR- 65

Query: 66  GFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 121
                    RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 66  --------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of CmoCh11G013810 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.4e-14
Identity = 54/119 (45.38%), Postives = 66/119 (55.46%), Query Frame = 1 

Query: 4   VKLCLFL-LFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQLFQ 63
           +K+ L L L  LAVVA   +  +  T    S VN        G       +E +RRQL  
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTK---SCVNGQGCIGEDGELDYLMDSETNRRQL-- 62

Query: 64  YGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
                   ARR +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 63  -------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]
BLAST of CmoCh11G013810 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 32  SSYVNDISKYSFFGGDSSEAMTEDS---RRQLFQYGFAYNKEARRRFLTYYALSKNNIPC 91
           S+ + D     + GG+  E    DS   RR L          A RR+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 92  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmoCh11G013810 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-10
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 1 

Query: 71  ARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC 118
           A +++++Y AL KN++PC RRG SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]
BLAST of CmoCh11G013810 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-09
Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 1 

Query: 39  SKYSFFGGDSSEAMTEDSRRQLFQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDC 98
           S +S   G  +E + E+   + F    +    A++++++Y A+ +N++PC RRG SYY+C
Sbjct: 40  SLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNC 99

Query: 99  KKRRRINPYRRGCAAITGCAR 120
           ++  + NPY RGC+ IT C R
Sbjct: 100 QRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmoCh11G013810 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.0e-25
Identity = 70/122 (57.38%), Postives = 80/122 (65.57%), Query Frame = 1 

Query: 1   METVKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQL 60
           M + KLCLFLL + AVVA PL  A  +    S    D+  Y F   +      EDSRR L
Sbjct: 1   MRSTKLCLFLLLI-AVVAAPLCLALSDDWTRS--YADVPDYDFTNSN------EDSRRLL 60

Query: 61  FQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAY K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARF 112

Query: 121 TD 123
           TD
Sbjct: 121 TD 112

[Close]
BLAST of CmoCh11G013810 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 63/121 (52.07%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 4   VKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTE--DSRRQLF 63
           +KL L LL ++A +A  L  A  + +   +Y N    Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTR--AYGNP--DYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 123
           QYGFAY K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmoCh11G013810 vs. TrEMBL
Match: A0A078FS15_BRANA (BnaA07g08550D protein OS=Brassica napus GN=BnaA07g08550D PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 54/122 (44.26%), Postives = 70/122 (57.38%), Query Frame = 1 

Query: 6   LCLFLLFVLAVVAPPLSFAYHETS---NDSSYVNDISKYSFFGGDSSEAM--TEDSRRQL 65
           L +F L +LA+VA  ++  Y  T    N    + D         D  E++  +E +RRQL
Sbjct: 7   LLIFGLLILAMVATSVNATYPLTKSCINGQGCIGD--------DDELESLMDSETNRRQL 66

Query: 66  FQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 123
            +          RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C RF
Sbjct: 67  AR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRF 111

[Close]
BLAST of CmoCh11G013810 vs. TrEMBL
Match: A0A087HRE6_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G291600 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-13
Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 8   LFLLFVLAVVAPPLSFAYHETS---NDSSYVNDISKYSFFGGDSSEAM--TEDSRRQLFQ 67
           +F L VLA+VA  +S  Y  T    N    + D         D  E++  +E +RRQL +
Sbjct: 8   IFGLLVLAMVAKSVSATYPLTKSCINGQGCIGD--------DDELESLMDSETNRRQLAR 67

Query: 68  YGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 121
                     RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 68  ---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of CmoCh11G013810 vs. TrEMBL
Match: M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 53  TEDSRRQLFQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 112
           +E +RRQL +          RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+
Sbjct: 35  SETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCS 94

Query: 113 AITGCARFTD 123
           AIT C RF +
Sbjct: 95  AITHCYRFLE 95

[Close]
BLAST of CmoCh11G013810 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-16
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1 

Query: 6   LCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAM--TEDSRRQLFQY 65
           L +F L +LA+VA  ++  Y  T +  +    I +      D  E++  +E +RRQL + 
Sbjct: 6   LLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGE-----DDELESLMDSETNRRQLAR- 65

Query: 66  GFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 121
                    RR++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 66  --------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]
BLAST of CmoCh11G013810 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-15
Identity = 54/119 (45.38%), Postives = 66/119 (55.46%), Query Frame = 1 

Query: 4   VKLCLFL-LFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQLFQ 63
           +K+ L L L  LAVVA   +  +  T    S VN        G       +E +RRQL  
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTK---SCVNGQGCIGEDGELDYLMDSETNRRQL-- 62

Query: 64  YGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
                   ARR +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 63  -------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]
BLAST of CmoCh11G013810 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-11
Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 32  SSYVNDISKYSFFGGDSSEAMTEDS---RRQLFQYGFAYNKEARRRFLTYYALSKNNIPC 91
           S+ + D     + GG+  E    DS   RR L          A RR+++Y AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 92  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmoCh11G013810 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 1 

Query: 39  SKYSFFGGDSSEAMTEDSRRQLFQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDC 98
           S +S   G  +E + E+   + F    +    A++++++Y A+ +N++PC RRG SYY+C
Sbjct: 40  SLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNC 99

Query: 99  KKRRRINPYRRGCAAITGCAR 120
           ++  + NPY RGC+ IT C R
Sbjct: 100 QRGAQANPYSRGCSTITRCRR 119

[Close]
BLAST of CmoCh11G013810 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 60.5 bits (145), Expect = 8.5e-10
Identity = 35/109 (32.11%), Postives = 59/109 (54.13%), Query Frame = 1 

Query: 13  VLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQLFQYGFAYNKE-- 72
           ++A++     FA   + +   +V   SK +    + S +  E+     F+     N+   
Sbjct: 12  IIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEE----FEMDSEINRRIL 71

Query: 73  ARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120
           A  ++++Y AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 72  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]
BLAST of CmoCh11G013810 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-24
Identity = 70/122 (57.38%), Postives = 80/122 (65.57%), Query Frame = 1 

Query: 1   METVKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQL 60
           M + KLCLFLL + AVVA PL  A  +    S    D+  Y F   +      EDSRR L
Sbjct: 1   MRSTKLCLFLLLI-AVVAAPLCLALSDDWTRS--YADVPDYDFTNSN------EDSRRLL 60

Query: 61  FQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAY K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARF 112

Query: 121 TD 123
           TD
Sbjct: 121 TD 112

[Close]
BLAST of CmoCh11G013810 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23
Identity = 70/122 (57.38%), Postives = 82/122 (67.21%), Query Frame = 1 

Query: 1   METVKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQL 60
           M ++KL LFLL V+AVVA PL  A+   S+D ++      Y F   +      EDSRR L
Sbjct: 1   MRSMKLGLFLL-VIAVVAAPLCLAF---SDDWTHAYAAPNYDFTTNN------EDSRRLL 60

Query: 61  FQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGFAY K  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARF 111

Query: 121 TD 123
           TD
Sbjct: 121 TD 111

[Close]
BLAST of CmoCh11G013810 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-19
Identity = 63/121 (52.07%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 4   VKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTE--DSRRQLF 63
           +KL L LL ++A +A  L  A  + +   +Y N    Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTR--AYGNP--DYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 123
           QYGFAY K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmoCh11G013810 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-17
Identity = 57/120 (47.50%), Postives = 74/120 (61.67%), Query Frame = 1 

Query: 4   VKLCL-FLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQLFQ 63
           VKLCL FLL  LAVVA   SF  H+ S    +++  S   F G D+   M  ++ R+   
Sbjct: 3   VKLCLIFLLLALAVVAEASSF--HDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALA 62

Query: 64  YGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 123
            G        R++++Y AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  GG--------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

[Close]
BLAST of CmoCh11G013810 vs. NCBI nr
Match: gi|729376459|ref|XP_010549330.1| (PREDICTED: protein RALF-like 19 [Tarenaya hassleriana])

HSP 1 Score: 85.1 bits (209), Expect = 9.2e-14
Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1 

Query: 6   LCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSSEAMTEDSRRQLFQYGF 65
           L +F L  LA+VA   + ++  T    S VN         G  +   +E +RRQL Q   
Sbjct: 6   LFVFALLTLAMVAESANASWPLTK---SCVNGEGCIGDEDGVETLMDSETNRRQLAQ--- 65

Query: 66  AYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
                  RR+++Y AL KNN+PC RRG SYYDC++R+R+NPYRRGC+ IT CARFT
Sbjct: 66  ------GRRYISYGALRKNNVPCSRRGRSYYDCRRRKRVNPYRRGCSVITHCARFT 109

The following BLAST results are available for this feature:
BLAST of CmoCh11G013810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF4_ARATH4.9e-1544.44Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1[more]
RLF19_ARATH5.4e-1445.38Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1[more]
RLF23_ARATH3.6e-1041.76Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
RALF_TOBAC6.1e-1055.32Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF22_ARATH5.2e-0935.80Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of CmoCh11G013810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHU4_CUCSA8.0e-2557.38Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1[more]
A0A0A0KCD7_CUCSA1.7e-1952.07F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1[more]
A0A078FS15_BRANA1.1e-1344.26BnaA07g08550D protein OS=Brassica napus GN=BnaA07g08550D PE=4 SV=1[more]
A0A087HRE6_ARAAL1.9e-1345.76Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G291600 PE=4 SV=1[more]
M4EMR1_BRARP2.4e-1358.57Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of CmoCh11G013810 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28270.12.7e-1644.44 ralf-like 4[more]
AT2G33775.13.0e-1545.38 ralf-like 19[more]
AT3G16570.12.0e-1141.76 rapid alkalinization factor 23[more]
AT3G05490.12.9e-1035.80 ralf-like 22[more]
AT4G15800.18.5e-1032.11 ralf-like 33[more]
BLAST of CmoCh11G013810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461879|ref|XP_004148669.1|1.2e-2457.38PREDICTED: protein RALF-like 19 [Cucumis sativus][more]
gi|659080853|ref|XP_008441015.1|1.7e-2357.38PREDICTED: protein RALF-like 19 [Cucumis melo][more]
gi|449466199|ref|XP_004150814.1|2.5e-1952.07PREDICTED: protein RALF-like 4 [Cucumis sativus][more]
gi|1009109354|ref|XP_015889777.1|1.0e-1747.50PREDICTED: protein RALF-like 19 [Ziziphus jujuba][more]
gi|729376459|ref|XP_010549330.1|9.2e-1444.83PREDICTED: protein RALF-like 19 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G013810.1CmoCh11G013810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 54..119
score: 7.8
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 6..121
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G013810Lsi03G010550Bottle gourd (USVL1VR-Ls)cmolsiB108
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G013810Silver-seed gourdcarcmoB0018
CmoCh11G013810Silver-seed gourdcarcmoB0256
CmoCh11G013810Silver-seed gourdcarcmoB0401
CmoCh11G013810Silver-seed gourdcarcmoB0508
CmoCh11G013810Cucumber (Chinese Long) v3cmocucB0121
CmoCh11G013810Cucumber (Chinese Long) v3cmocucB0133
CmoCh11G013810Cucumber (Chinese Long) v3cmocucB0136
CmoCh11G013810Cucumber (Chinese Long) v3cmocucB0146
CmoCh11G013810Cucumber (Chinese Long) v3cmocucB0160
CmoCh11G013810Watermelon (97103) v2cmowmbB078
CmoCh11G013810Watermelon (97103) v2cmowmbB088
CmoCh11G013810Watermelon (97103) v2cmowmbB111
CmoCh11G013810Watermelon (97103) v2cmowmbB128
CmoCh11G013810Wax gourdcmowgoB0104
CmoCh11G013810Wax gourdcmowgoB0110
CmoCh11G013810Wax gourdcmowgoB0124
CmoCh11G013810Cucurbita moschata (Rifu)cmocmoB131
CmoCh11G013810Cucurbita moschata (Rifu)cmocmoB096
CmoCh11G013810Cucurbita moschata (Rifu)cmocmoB105
CmoCh11G013810Cucurbita moschata (Rifu)cmocmoB110
CmoCh11G013810Cucurbita moschata (Rifu)cmocmoB125
CmoCh11G013810Cucurbita moschata (Rifu)cmocmoB129
CmoCh11G013810Cucumber (Gy14) v1cgycmoB0624
CmoCh11G013810Cucumber (Gy14) v1cgycmoB0684
CmoCh11G013810Cucumber (Gy14) v1cgycmoB1084
CmoCh11G013810Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G013810Cucurbita maxima (Rimu)cmacmoB318
CmoCh11G013810Cucurbita maxima (Rimu)cmacmoB494
CmoCh11G013810Cucurbita maxima (Rimu)cmacmoB678
CmoCh11G013810Cucurbita maxima (Rimu)cmacmoB761
CmoCh11G013810Cucurbita maxima (Rimu)cmacmoB842
CmoCh11G013810Bottle gourd (USVL1VR-Ls)cmolsiB093
CmoCh11G013810Wild cucumber (PI 183967)cmocpiB120
CmoCh11G013810Wild cucumber (PI 183967)cmocpiB136
CmoCh11G013810Cucumber (Chinese Long) v2cmocuB107
CmoCh11G013810Cucumber (Chinese Long) v2cmocuB117
CmoCh11G013810Cucumber (Chinese Long) v2cmocuB137
CmoCh11G013810Melon (DHL92) v3.5.1cmomeB085
CmoCh11G013810Melon (DHL92) v3.5.1cmomeB114
CmoCh11G013810Melon (DHL92) v3.5.1cmomeB128
CmoCh11G013810Melon (DHL92) v3.5.1cmomeB133
CmoCh11G013810Watermelon (Charleston Gray)cmowcgB088
CmoCh11G013810Watermelon (Charleston Gray)cmowcgB086
CmoCh11G013810Watermelon (Charleston Gray)cmowcgB109
CmoCh11G013810Watermelon (Charleston Gray)cmowcgB123
CmoCh11G013810Watermelon (97103) v1cmowmB081
CmoCh11G013810Watermelon (97103) v1cmowmB098
CmoCh11G013810Watermelon (97103) v1cmowmB106
CmoCh11G013810Watermelon (97103) v1cmowmB109
CmoCh11G013810Cucurbita pepo (Zucchini)cmocpeB087
CmoCh11G013810Cucurbita pepo (Zucchini)cmocpeB092
CmoCh11G013810Cucurbita pepo (Zucchini)cmocpeB095
CmoCh11G013810Cucurbita pepo (Zucchini)cmocpeB114
CmoCh11G013810Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G013810Bottle gourd (USVL1VR-Ls)cmolsiB103
CmoCh11G013810Bottle gourd (USVL1VR-Ls)cmolsiB113
CmoCh11G013810Bottle gourd (USVL1VR-Ls)cmolsiB116
CmoCh11G013810Bottle gourd (USVL1VR-Ls)cmolsiB140
CmoCh11G013810Cucumber (Gy14) v2cgybcmoB156
CmoCh11G013810Cucumber (Gy14) v2cgybcmoB270
CmoCh11G013810Cucumber (Gy14) v2cgybcmoB881
CmoCh11G013810Melon (DHL92) v3.6.1cmomedB091
CmoCh11G013810Melon (DHL92) v3.6.1cmomedB123
CmoCh11G013810Melon (DHL92) v3.6.1cmomedB139
CmoCh11G013810Melon (DHL92) v3.6.1cmomedB143
CmoCh11G013810Melon (DHL92) v3.6.1cmomedB146