CmoCh11G013640 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTTATATAAACTCCCCCTTCCCTCCTTGTTCCTCACTTTCCTCCACCGCCGCCGCCGCCCTCCATGGCTGCCCCTCACAATATTTGGGCCTTCCTCAACTCCGGCAGTGATGTCGATATCGACATCGACCTTGACGATGATAATGACAACGACAATAGCAACGACAAATCCCCTGCCAACACCGACCTCTTACCTCCCCTGCCTTTGTCGGGAAGGAAGAGGGAGGCGGTGGAGGGGAGACCGGGTGGAGGTGGAGAGTCGACCGAACATGAAATTCATATTTGGACGGAGAGGGAGAGGAGGAAGAGGATGAGGAATATGTTCTCTAATCTTCATGCTTTGATTCCTCACCTTCCTCCTAAGGTAACTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCATCTCATCCATTGAACAAAACTCTTGTTTTTGTAAATTTTGAATTTTTATATATTTTTTTTAATTGTTTAATTGTGATATTATATGTCAAAATGAGCTTGGTTGAACTATAATTAACATATATTTTTAATTAAAAAGTCAATGGTTTAAGGAGTTTATTAAATTTAAAAAAAATATTATTTTTTTTCTGGGTCCATATACTATCCAGTGATGTAACCTAACAAACTACCATTTACACAAGTTGAGTTGAGTTGAAGAAAGTTTTTGGATTGGTTGGATTTGTGATTCAAGTACTCTGCATAGAATTCACAAACCAACCGCTCGGTTAAATTGGGTTGTCGAGCTCTTTTTTTTAATTATTTTTAAAAAAATTCTACTTATCTACCCTACACGATGCATTAATAATTAAAATCTCAAAAAAAAAATTCAAGTATGAAATATTCCGAAGTTACAATGAGTCATGAATGATACAAACTTCAGATATTTTTAATGTTTATAATATCTGTAGAATAGGATAGGGTTAAGTTTTAACCTCCGATTAAATTTTTTTTTTTAAATCTTAAAATTATGTTATGTATATGATATTTATTTTGTGAAATAATAATTCAATAAGGGAACAAATGAAATGGCAGGCAGACAAATCAACTATAGTGGACGAAGCAGTAAACTACATAAAAACCGTACAACAAACCCTTCAAACACTCTACAACCAAAAGCTCGAAAAGCTCCAAAACAACAATCCAGCTGTGAGCTATAAGGCTGCTCATTATCATCCTCAACAACAACAGCAACAACAACAATCCAGCTCAACCACCACAACCCACCAAGCTTTCTTGACCGACCAAGCTTCTTCTTCCAACGGCATGTCCTCCACTCTTCTTCCATCACCACTGCCGCCGTTGCCGCCTCCTTTTTCTGATACTACTACGACGTTTCAGACTTGGACTTCCTCCCACCTCGTATTAAGTATTTGTGGCGGCGAAGCCCATTTCTGCATCTGCTCCGTCAAGAAGTCTGGCTTGTTCGCCGCCGTTTGTTATATTCTTGATAAGCATCAGATCGAGGTTGTTTCGGCTCATGTCTCCTCGGATTTCCATCGCACGTTCTTTATGATTCAAGGCCATGTAAGTGCGACCTCTCTATGCATCTTTGTTTTTCATTTTTTCCTTTACAAGGTTTGAATTTTAGTGTGAGATCTCACGTCCATTGGAGAGGAAAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTCACTAGTATACGTGTTTTAAAAACTTTGAGAGAAAGCCCGAAAGGGAAAGTACAAAGAAGACCATATCTACTCGCAGAGGTGGGCTTGGACGGTTACATTTAGAAATCTCCTCCATTCTTTTCTTAATTTGAACAAAGATTTCGTTCATTGTTTCATGTTTTATTTTCTAATTATAAAATTGCACGTTTTATTTTCTAATTGTAAAATTGTAATGAATGGTGCAAATTATAATGGAATATATATTTTTTTTTATCGAAAGGGGTAAAAGAGAATCGAAACCGAACTCTAATAGATTCTTATCGAGTTAATTTCTAAGAGTTGTTATTTGAAATGAGTTCTTTTGACGAGAGCAGGTGAATGGAAGATGGGACGAATTCGGAGCAGCGATGGTGGCAGAAGAAATGTTCAAGCAAGCTGCCGGGGAGATCAACTTCTGGTTGTCTTCTTGATCGGAGTGTCGGATGTTCTCTCTGCCATGAAAGCTGTTGCATGAAGTTTGAGAGAGCTTAGATCATCATCATCAACATGGATCAATATGGCTACTCTATCTTGAAACTCTTCACTTCTGGGCCTAG CTTTCTTATATAAACTCCCCCTTCCCTCCTTGTTCCTCACTTTCCTCCACCGCCGCCGCCGCCCTCCATGGCTGCCCCTCACAATATTTGGGCCTTCCTCAACTCCGGCAGTGATGTCGATATCGACATCGACCTTGACGATGATAATGACAACGACAATAGCAACGACAAATCCCCTGCCAACACCGACCTCTTACCTCCCCTGCCTTTGTCGGGAAGGAAGAGGGAGGCGGTGGAGGGGAGACCGGGTGGAGGTGGAGAGTCGACCGAACATGAAATTCATATTTGGACGGAGAGGGAGAGGAGGAAGAGGATGAGGAATATGTTCTCTAATCTTCATGCTTTGATTCCTCACCTTCCTCCTAAGGCAGACAAATCAACTATAGTGGACGAAGCAGTAAACTACATAAAAACCGTACAACAAACCCTTCAAACACTCTACAACCAAAAGCTCGAAAAGCTCCAAAACAACAATCCAGCTGTGAGCTATAAGGCTGCTCATTATCATCCTCAACAACAACAGCAACAACAACAATCCAGCTCAACCACCACAACCCACCAAGCTTTCTTGACCGACCAAGCTTCTTCTTCCAACGGCATGTCCTCCACTCTTCTTCCATCACCACTGCCGCCGTTGCCGCCTCCTTTTTCTGATACTACTACGACGTTTCAGACTTGGACTTCCTCCCACCTCGTATTAAGTATTTGTGGCGGCGAAGCCCATTTCTGCATCTGCTCCGTCAAGAAGTCTGGCTTGTTCGCCGCCGTTTGTTATATTCTTGATAAGCATCAGATCGAGGTTGTTTCGGCTCATGTCTCCTCGGATTTCCATCGCACGTTCTTTATGATTCAAGGCCATGTGAATGGAAGATGGGACGAATTCGGAGCAGCGATGGTGGCAGAAGAAATGTTCAAGCAAGCTGCCGGGGAGATCAACTTCTGGTTGTCTTCTTGATCGGAGTGTCGGATGTTCTCTCTGCCATGAAAGCTGTTGCATGAAGTTTGAGAGAGCTTAGATCATCATCATCAACATGGATCAATATGGCTACTCTATCTTGAAACTCTTCACTTCTGGGCCTAG ATGGCTGCCCCTCACAATATTTGGGCCTTCCTCAACTCCGGCAGTGATGTCGATATCGACATCGACCTTGACGATGATAATGACAACGACAATAGCAACGACAAATCCCCTGCCAACACCGACCTCTTACCTCCCCTGCCTTTGTCGGGAAGGAAGAGGGAGGCGGTGGAGGGGAGACCGGGTGGAGGTGGAGAGTCGACCGAACATGAAATTCATATTTGGACGGAGAGGGAGAGGAGGAAGAGGATGAGGAATATGTTCTCTAATCTTCATGCTTTGATTCCTCACCTTCCTCCTAAGGCAGACAAATCAACTATAGTGGACGAAGCAGTAAACTACATAAAAACCGTACAACAAACCCTTCAAACACTCTACAACCAAAAGCTCGAAAAGCTCCAAAACAACAATCCAGCTGTGAGCTATAAGGCTGCTCATTATCATCCTCAACAACAACAGCAACAACAACAATCCAGCTCAACCACCACAACCCACCAAGCTTTCTTGACCGACCAAGCTTCTTCTTCCAACGGCATGTCCTCCACTCTTCTTCCATCACCACTGCCGCCGTTGCCGCCTCCTTTTTCTGATACTACTACGACGTTTCAGACTTGGACTTCCTCCCACCTCGTATTAAGTATTTGTGGCGGCGAAGCCCATTTCTGCATCTGCTCCGTCAAGAAGTCTGGCTTGTTCGCCGCCGTTTGTTATATTCTTGATAAGCATCAGATCGAGGTTGTTTCGGCTCATGTCTCCTCGGATTTCCATCGCACGTTCTTTATGATTCAAGGCCATGTGAATGGAAGATGGGACGAATTCGGAGCAGCGATGGTGGCAGAAGAAATGTTCAAGCAAGCTGCCGGGGAGATCAACTTCTGGTTGTCTTCTTGA
BLAST of CmoCh11G013640 vs. Swiss-Prot
Match: BH095_ARATH (Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2) HSP 1 Score: 171.8 bits (434), Expect = 1.1e-41 Identity = 108/249 (43.37%), Postives = 150/249 (60.24%), Query Frame = 1
BLAST of CmoCh11G013640 vs. Swiss-Prot
Match: BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-06 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TrEMBL
Match: A0A0A0K4R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073650 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.9e-80 Identity = 176/309 (56.96%), Postives = 218/309 (70.55%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TrEMBL
Match: A5B4T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00170 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 3.0e-57 Identity = 142/308 (46.10%), Postives = 184/308 (59.74%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TrEMBL
Match: V4UAF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030106mg PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.3e-56 Identity = 139/298 (46.64%), Postives = 180/298 (60.40%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TrEMBL
Match: A0A067KKD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14785 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 9.0e-54 Identity = 127/245 (51.84%), Postives = 160/245 (65.31%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TrEMBL
Match: A0A067EX72_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g037241mg PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.9e-52 Identity = 135/287 (47.04%), Postives = 172/287 (59.93%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TAIR10
Match: AT1G49770.1 (AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 171.8 bits (434), Expect = 6.4e-43 Identity = 108/249 (43.37%), Postives = 150/249 (60.24%), Query Frame = 1
BLAST of CmoCh11G013640 vs. TAIR10
Match: AT3G61950.1 (AT3G61950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 55.1 bits (131), Expect = 8.7e-08 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 1
BLAST of CmoCh11G013640 vs. NCBI nr
Match: gi|659109917|ref|XP_008454949.1| (PREDICTED: transcription factor bHLH95-like [Cucumis melo]) HSP 1 Score: 315.8 bits (808), Expect = 7.7e-83 Identity = 181/312 (58.01%), Postives = 222/312 (71.15%), Query Frame = 1
BLAST of CmoCh11G013640 vs. NCBI nr
Match: gi|700188696|gb|KGN43929.1| (hypothetical protein Csa_7G073650 [Cucumis sativus]) HSP 1 Score: 307.4 bits (786), Expect = 2.7e-80 Identity = 176/309 (56.96%), Postives = 218/309 (70.55%), Query Frame = 1
BLAST of CmoCh11G013640 vs. NCBI nr
Match: gi|778725107|ref|XP_004137111.2| (PREDICTED: transcription factor bHLH95 [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 6.6e-74 Identity = 155/262 (59.16%), Postives = 191/262 (72.90%), Query Frame = 1
BLAST of CmoCh11G013640 vs. NCBI nr
Match: gi|1000967257|ref|XP_015574371.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH95 [Ricinus communis]) HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60 Identity = 141/286 (49.30%), Postives = 186/286 (65.03%), Query Frame = 1
BLAST of CmoCh11G013640 vs. NCBI nr
Match: gi|225428845|ref|XP_002282369.1| (PREDICTED: transcription factor bHLH95 [Vitis vinifera]) HSP 1 Score: 230.3 bits (586), Expect = 4.3e-57 Identity = 142/308 (46.10%), Postives = 184/308 (59.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |