CmoCh11G012710 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATGCATGCAGCTTCCCAAAACGACGTCGCTTCCACCATCTGCAAGAAAACTAGAAACCCTTCTTTTTGCTTTGACGTGTTGAAATCTGCTGGCACCACAGACCTGAAAGGACTGGCCACCTTCACCCTCAACCTTGCCCACGACAAGACTGTTGAAAGTCGTGCCCTCGCCCAGTCCCTGGCGTCCAAGGCAATTGATCCCAAGCTTAAGGAGCGCTATGCCACTTGTGCTGAACAATACGACAATGCCATCGACGACATCGAGGATGGGAAGGTCAACTTGGGGGAAGGTGACTACAATGGCGTCAACATTAAGGCGTCTGCCTCCATGACGGAGGCAGGCGACTGTCTGGATAGCTTTGCGCAGCCGCCGAAGGACCCATCCGCGCTTTCGGGCAATGGGAAGACTGTGGAAGATATTTGTAGTATCATCTTGGTTATAGCCAATCTTCTTCTTGGGCGTGCCTAA ATGTCCATGCATGCAGCTTCCCAAAACGACGTCGCTTCCACCATCTGCAAGAAAACTAGAAACCCTTCTTTTTGCTTTGACGTGTTGAAATCTGCTGGCACCACAGACCTGAAAGGACTGGCCACCTTCACCCTCAACCTTGCCCACGACAAGACTGTTGAAAGTCGTGCCCTCGCCCAGTCCCTGGCGTCCAAGGCAATTGATCCCAAGCTTAAGGAGCGCTATGCCACTTGTGCTGAACAATACGACAATGCCATCGACGACATCGAGGATGGGAAGGTCAACTTGGGGGAAGGTGACTACAATGGCGTCAACATTAAGGCGTCTGCCTCCATGACGGAGGCAGGCGACTGTCTGGATAGCTTTGCGCAGCCGCCGAAGGACCCATCCGCGCTTTCGGGCAATGGGAAGACTGTGGAAGATATTTGTAGTATCATCTTGGTTATAGCCAATCTTCTTCTTGGGCGTGCCTAA ATGTCCATGCATGCAGCTTCCCAAAACGACGTCGCTTCCACCATCTGCAAGAAAACTAGAAACCCTTCTTTTTGCTTTGACGTGTTGAAATCTGCTGGCACCACAGACCTGAAAGGACTGGCCACCTTCACCCTCAACCTTGCCCACGACAAGACTGTTGAAAGTCGTGCCCTCGCCCAGTCCCTGGCGTCCAAGGCAATTGATCCCAAGCTTAAGGAGCGCTATGCCACTTGTGCTGAACAATACGACAATGCCATCGACGACATCGAGGATGGGAAGGTCAACTTGGGGGAAGGTGACTACAATGGCGTCAACATTAAGGCGTCTGCCTCCATGACGGAGGCAGGCGACTGTCTGGATAGCTTTGCGCAGCCGCCGAAGGACCCATCCGCGCTTTCGGGCAATGGGAAGACTGTGGAAGATATTTGTAGTATCATCTTGGTTATAGCCAATCTTCTTCTTGGGCGTGCCTAA
BLAST of CmoCh11G012710 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 7.6e-29 Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 1
BLAST of CmoCh11G012710 vs. Swiss-Prot
Match: PMEI1_ARATH (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana GN=PMEI1 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 5.5e-19 Identity = 53/153 (34.64%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of CmoCh11G012710 vs. Swiss-Prot
Match: PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.9e-18 Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 4.9e-43 Identity = 92/149 (61.74%), Postives = 108/149 (72.48%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.4e-39 Identity = 88/145 (60.69%), Postives = 107/145 (73.79%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25 Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TrEMBL
Match: A0A0A0KHY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 9.1e-21 Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TrEMBL
Match: V4LWJ6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022367mg PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.0e-19 Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TAIR10
Match: AT1G48020.1 (AT1G48020.1 pectin methylesterase inhibitor 1) HSP 1 Score: 95.5 bits (236), Expect = 3.1e-20 Identity = 53/153 (34.64%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of CmoCh11G012710 vs. TAIR10
Match: AT3G17220.1 (AT3G17220.1 pectin methylesterase inhibitor 2) HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19 Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of CmoCh11G012710 vs. NCBI nr
Match: gi|778722211|ref|XP_004148234.2| (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 7.1e-43 Identity = 92/149 (61.74%), Postives = 108/149 (72.48%), Query Frame = 1
BLAST of CmoCh11G012710 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 182.2 bits (461), Expect = 7.1e-43 Identity = 92/150 (61.33%), Postives = 111/150 (74.00%), Query Frame = 1
BLAST of CmoCh11G012710 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 182.2 bits (461), Expect = 7.1e-43 Identity = 93/152 (61.18%), Postives = 111/152 (73.03%), Query Frame = 1
BLAST of CmoCh11G012710 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42 Identity = 92/150 (61.33%), Postives = 110/150 (73.33%), Query Frame = 1
BLAST of CmoCh11G012710 vs. NCBI nr
Match: gi|659113907|ref|XP_008456812.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 6.0e-42 Identity = 91/150 (60.67%), Postives = 110/150 (73.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |